FFCP PHASE1:Hg19::chr20:33851612..33851622,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr20:33851612..33851622,+ to FFCP PHASE1:Hg19::chr20:33851612..33851622,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr20:33851612..33851622,+ | |||
|coexpression_cluster_id=C1867 | |||
|description=CAGE_peak_at_chr20:33851612..33851622,+ | |||
|id=chr20:33851612..33851622,+ | |||
|ontology_enrichment_celltype=CL:0000066!2.76e-15!254;CL:1000497!9.46e-13!18;CL:0002518!9.46e-13!18;CL:1000507!7.35e-12!12;CL:1000494!7.35e-12!12;CL:1000449!2.25e-11!16;CL:0002681!4.72e-11!13;CL:0002584!4.72e-11!13;CL:0000239!1.51e-10!3;CL:1000615!1.51e-10!3;CL:0002306!1.51e-10!3;CL:1000415!3.82e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:1000497;1.88e-11;17!CL:0002518;1.88e-11;17!CL:0002681;1.90e-09;12!CL:0002584;1.90e-09;12!CL:1000746;1.11e-07;7!CL:1000612;1.11e-07;7!CL:1000449;1.17e-07;15!CL:0000650;4.55e-07;2!CL:1000500;4.55e-07;2!CL:1000618;4.55e-07;2!CL:1001318;4.55e-07;2!CL:0002173;4.55e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:1000497,2.10e-11,17;CL:0002518,2.10e-11,17;CL:0002681,2.13e-09,12;CL:0002584,2.13e-09,12;CL:0000066,1.67e-08,253;CL:1000746,1.25e-07,7;CL:1000612,1.25e-07,7;CL:1000449,1.28e-07,15;CL:0000650,5.60e-07,2;CL:1000500,5.60e-07,2;CL:1000618,5.60e-07,2;CL:1001318,5.60e-07,2;CL:0002173,5.60e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0001041;2.02e-18;30!UBERON:0009497;9.74e-09;13 | |||
|ontology_enrichment_disease=DOID:305!4.69e-18!106;DOID:0050687!1.38e-13!143 | |||
|ontology_enrichment_disease_v019=DOID:1324;1.52e-07;15!DOID:4468;2.58e-07;2!DOID:0050615;4.19e-07;16!DOID:3910;4.55e-07;2!DOID:7;5.36e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:305,8.34e-10,106;DOID:0050687,1.78e-08,143;DOID:1324,1.34e-07,15;DOID:7,1.66e-07,39;DOID:4468,2.74e-07,2;DOID:0050615,3.73e-07,16;DOID:3910,3.93e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0001737!2.58e-20!9;UBERON:0002113!2.30e-19!27;UBERON:0003918!2.30e-19!27;UBERON:0005095!2.30e-19!27;UBERON:0007687!2.30e-19!27;UBERON:0008947!1.14e-16!38;UBERON:0003258!1.14e-16!38;UBERON:0000489!8.60e-16!32;UBERON:0005172!2.99e-15!55;UBERON:0005173!2.99e-15!55;UBERON:0005177!3.65e-15!107;UBERON:0000058!4.29e-15!26;UBERON:0006554!3.59e-14!44;UBERON:0001008!9.11e-14!45;UBERON:0006555!2.11e-13!17;UBERON:0005103!2.11e-13!17;UBERON:0000083!2.11e-13!17;UBERON:0009201!2.11e-13!17;UBERON:0004819!2.11e-13!17;UBERON:0006553!2.11e-13!17;UBERON:0003074!2.11e-13!17;UBERON:0003060!2.11e-13!17;UBERON:0002417!2.83e-13!61;UBERON:0000916!2.83e-13!61;UBERON:0009569!9.91e-13!113;UBERON:0000080!1.48e-12!18;UBERON:0002120!1.48e-12!18;UBERON:0004875!1.48e-12!18;UBERON:0005721!1.48e-12!18;UBERON:0005754!1.48e-12!18;UBERON:0007297!1.48e-12!18;UBERON:0003104!3.43e-12!238;UBERON:0009142!3.43e-12!238;UBERON:0000466!7.34e-12!126;UBERON:0009773!7.35e-12!12;UBERON:0001231!7.35e-12!12;UBERON:0004810!7.35e-12!12;UBERON:0001041!1.37e-11!98;UBERON:0004211!2.25e-11!16;UBERON:0001285!2.25e-11!16;UBERON:0007684!2.25e-11!16;UBERON:0003220!2.25e-11!16;UBERON:0004208!2.25e-11!16;UBERON:0004876!4.03e-11!20;UBERON:0001225!4.72e-11!13;UBERON:0008987!4.72e-11!13;UBERON:0004921!4.73e-11!129;UBERON:0004185!4.73e-11!129;UBERON:0000077!4.80e-11!130;UBERON:0000065!7.77e-11!53;UBERON:0006853!1.51e-10!3;UBERON:0007685!1.51e-10!3;UBERON:0004134!1.51e-10!3;UBERON:0003887!1.66e-10!21;UBERON:0000481!6.71e-10!347;UBERON:0001007!8.54e-10!155;UBERON:0001555!8.54e-10!155;UBERON:0007026!8.54e-10!155;UBERON:0000464!9.11e-10!104;UBERON:0001557!6.95e-09!19;UBERON:0001851!9.04e-09!16;UBERON:0001048!1.60e-08!168;UBERON:0004119!2.09e-08!169;UBERON:0000925!2.09e-08!169;UBERON:0006595!2.09e-08!169;UBERON:0000072!2.61e-08!46;UBERON:0000353!3.44e-08!17;UBERON:0003064!6.17e-08!37;UBERON:0002048!9.18e-08!22;UBERON:0000117!9.18e-08!22;UBERON:0000171!9.18e-08!22;UBERON:0000170!9.18e-08!22;UBERON:0005597!9.18e-08!22;UBERON:0000118!9.18e-08!22;UBERON:0005911!1.09e-07!82;UBERON:0002294!1.34e-07!7;UBERON:0001173!1.34e-07!7;UBERON:0004912!1.34e-07!7;UBERON:0003886!1.82e-07!63;UBERON:0000477!4.68e-07!286;UBERON:0001004!5.21e-07!72 | |||
|ontology_enrichment_uberon_v019=UBERON:0002394;7.04e-13;4!UBERON:0003928;7.04e-13;4!UBERON:0002171;7.24e-13;1!UBERON:0006518;7.24e-13;1!UBERON:0008949;7.24e-13;1!UBERON:0000101;7.24e-13;1!UBERON:0002167;7.24e-13;1!UBERON:0002113;2.97e-12;24!UBERON:0011143;2.97e-12;24!UBERON:0000058;3.38e-11;10!UBERON:0000489;3.97e-10;29!UBERON:0006554;8.70e-10;30!UBERON:0001008;8.70e-10;30!UBERON:0001225;1.90e-09;12!UBERON:0008987;1.90e-09;12!UBERON:0002048;1.11e-08;22!UBERON:0000117;1.11e-08;22!UBERON:0000171;1.11e-08;22!UBERON:0000170;1.11e-08;22!UBERON:0002294;9.72e-08;7!UBERON:0001173;9.72e-08;7!UBERON:0000074;1.11e-07;7!UBERON:0001229;1.11e-07;7!UBERON:0001851;1.17e-07;15!UBERON:0006555;1.17e-07;15!UBERON:0000353;1.17e-07;15!UBERON:0004819;1.17e-07;15!UBERON:0001285;1.17e-07;15!UBERON:0007684;1.17e-07;15!UBERON:0004903;4.55e-07;2!UBERON:0003567;4.55e-07;2!UBERON:0003838;4.55e-07;2!UBERON:0003586;4.55e-07;2!UBERON:0005169;4.55e-07;2!UBERON:0002321;4.55e-07;2!UBERON:0005215;4.55e-07;2!UBERON:0002303;4.55e-07;2!UBERON:0002319;4.55e-07;2!UBERON:0002173;4.55e-07;2!UBERON:0002186;4.55e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000058,1.87e-15,19;UBERON:0002171,7.68e-13,1;UBERON:0006518,7.68e-13,1;UBERON:0008949,7.68e-13,1;UBERON:0000101,7.68e-13,1;UBERON:0002167,7.68e-13,1;UBERON:0002113,2.85e-11,26;UBERON:0003918,2.85e-11,26;UBERON:0011143,2.85e-11,26;UBERON:0005095,2.85e-11,26;UBERON:0007687,2.85e-11,26;UBERON:0005177,2.75e-10,101;UBERON:0000489,1.93e-09,31;UBERON:0001225,2.13e-09,12;UBERON:0008987,2.13e-09,12;UBERON:0009569,3.77e-09,112;UBERON:0002394,6.51e-09,6;UBERON:0003928,6.51e-09,6;UBERON:0002048,1.00e-08,22;UBERON:0000117,1.00e-08,22;UBERON:0000171,1.00e-08,22;UBERON:0000170,1.00e-08,22;UBERON:0005597,1.00e-08,22;UBERON:0000118,1.00e-08,22;UBERON:0006554,1.17e-08,47;UBERON:0001008,1.80e-08,48;UBERON:0005911,2.89e-08,82;UBERON:0002100,3.45e-08,199;UBERON:0005153,8.18e-08,37;UBERON:0007499,9.50e-08,25;UBERON:0010532,1.25e-07,7;UBERON:0000074,1.25e-07,7;UBERON:0001229,1.25e-07,7;UBERON:0001230,1.25e-07,7;UBERON:0003220,1.25e-07,7;UBERON:0005749,1.25e-07,7;UBERON:0004199,1.25e-07,7;UBERON:0004209,1.25e-07,7;UBERON:0004198,1.25e-07,7;UBERON:0001851,1.28e-07,15;UBERON:0004211,1.28e-07,15;UBERON:0009773,1.28e-07,15;UBERON:0000353,1.28e-07,15;UBERON:0001231,1.28e-07,15;UBERON:0001285,1.28e-07,15;UBERON:0007684,1.28e-07,15;UBERON:0004208,1.28e-07,15;UBERON:0009856,1.86e-07,26;UBERON:0005172,1.87e-07,54;UBERON:0005173,1.87e-07,54;UBERON:0006555,3.57e-07,16;UBERON:0004819,3.57e-07,16;UBERON:0004903,3.93e-07,2;UBERON:0002173,3.93e-07,2;UBERON:0002186,3.93e-07,2;UBERON:0003567,5.60e-07,2;UBERON:0003838,5.60e-07,2;UBERON:0003586,5.60e-07,2;UBERON:0005169,5.60e-07,2;UBERON:0002321,5.60e-07,2;UBERON:0005215,5.60e-07,2;UBERON:0002303,5.60e-07,2;UBERON:0002319,5.60e-07,2;UBERON:0005103,8.85e-07,8;UBERON:0000083,8.85e-07,8;UBERON:0009201,8.85e-07,8;UBERON:0006553,8.85e-07,8;UBERON:0003074,8.85e-07,8;UBERON:0003060,8.85e-07,8 | |||
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| ||
|short_description=p@chr20:33851612..33851622,+ | |||
}} | }} |
Latest revision as of 13:22, 28 July 2015
Short description: | p@chr20:33851612..33851622, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:33851612..33851622, + |
Coexpression cluster: | C1867_renal_bile_clear_Alveolar_mesothelioma_lung_prostate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney cell | 2.10e-11 | 17 |
kidney epithelial cell | 2.10e-11 | 17 |
kidney cortical cell | 2.13e-09 | 12 |
renal cortical epithelial cell | 2.13e-09 | 12 |
epithelial cell | 1.67e-08 | 253 |
glomerular cell | 1.25e-07 | 7 |
kidney corpuscule cell | 1.25e-07 | 7 |
epithelial cell of nephron | 1.28e-07 | 15 |
mesangial cell | 5.60e-07 | 2 |
kidney interstitial cell | 5.60e-07 | 2 |
juxtaglomerular complex cell | 5.60e-07 | 2 |
renal interstitial pericyte | 5.60e-07 | 2 |
extraglomerular mesangial cell | 5.60e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 8.34e-10 | 106 |
cell type cancer | 1.78e-08 | 143 |
lung cancer | 1.34e-07 | 15 |
disease of anatomical entity | 1.66e-07 | 39 |
clear cell adenocarcinoma | 2.74e-07 | 2 |
respiratory system cancer | 3.73e-07 | 16 |
lung adenocarcinoma | 3.93e-07 | 2 |