FFCP PHASE1:Hg19::chr21:27484355..27484373,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr21:27484355..27484373,- to FFCP PHASE1:Hg19::chr21:27484355..27484373,-: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=351 | |EntrezGene=351 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=620 | |HGNC=620 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=26bp_to_ENST00000462267_5end | |||
|cluster_id=chr21:27484355..27484373,- | |||
|description=CAGE_peak_16_at_APP_5end | |||
|id=chr21:27484355..27484373,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!1.35e-15!659;UBERON:0004111!3.41e-15!241;UBERON:0000477!6.98e-15!286;UBERON:0000467!2.83e-13!625;UBERON:0000480!5.04e-13!626;UBERON:0000922!3.64e-12!612;UBERON:0001049!1.64e-11!57;UBERON:0005068!1.64e-11!57;UBERON:0006241!1.64e-11!57;UBERON:0007135!1.64e-11!57;UBERON:0000481!8.01e-11!347;UBERON:0002050!8.71e-11!605;UBERON:0005423!8.71e-11!605;UBERON:0000923!1.33e-10!604;UBERON:0005291!1.33e-10!604;UBERON:0006598!1.33e-10!604;UBERON:0002532!1.33e-10!604;UBERON:0001017!1.69e-10!82;UBERON:0000924!1.96e-10!173;UBERON:0006601!1.96e-10!173;UBERON:0000064!2.34e-10!219;UBERON:0005743!3.09e-10!86;UBERON:0007023!3.13e-10!115;UBERON:0002346!6.50e-10!90;UBERON:0000025!7.81e-10!194;UBERON:0004121!9.85e-10!169;UBERON:0002616!1.70e-09!59;UBERON:0002020!2.06e-09!34;UBERON:0003528!2.06e-09!34;UBERON:0000073!2.73e-09!94;UBERON:0001016!2.73e-09!94;UBERON:0003075!3.85e-09!86;UBERON:0007284!3.85e-09!86;UBERON:0000119!4.61e-09!312;UBERON:0000483!5.13e-09!309;UBERON:0001893!7.98e-09!34;UBERON:0003080!1.31e-08!42;UBERON:0000033!1.60e-08!123;UBERON:0002791!1.64e-08!33;UBERON:0002780!1.66e-08!41;UBERON:0001890!1.66e-08!41;UBERON:0006240!1.66e-08!41;UBERON:0001869!2.16e-08!32;UBERON:0000955!4.19e-08!69;UBERON:0006238!4.19e-08!69;UBERON:0000153!5.48e-08!129;UBERON:0007811!5.48e-08!129;UBERON:0000062!6.15e-08!511;UBERON:0001950!4.17e-07!20;UBERON:0000475!5.83e-07!365;UBERON:0000956!7.14e-07!25;UBERON:0000203!7.14e-07!25;UBERON:0002619!7.67e-07!22 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004111,7.27e-12,240;UBERON:0001049,1.62e-09,56;UBERON:0005068,1.62e-09,56;UBERON:0006241,1.62e-09,56;UBERON:0007135,1.62e-09,56;UBERON:0002346,6.14e-09,86;UBERON:0010314,1.39e-08,132;UBERON:0003075,1.47e-08,82;UBERON:0007284,1.47e-08,82;UBERON:0000073,1.56e-08,53;UBERON:0002616,1.56e-08,53;UBERON:0011216,2.54e-08,223;UBERON:0007023,3.83e-08,114;UBERON:0001017,9.90e-08,81;UBERON:0000025,1.06e-07,192;UBERON:0003528,1.37e-07,34;UBERON:0002020,1.37e-07,34;UBERON:0001016,3.34e-07,89;UBERON:0002780,5.22e-07,41;UBERON:0001890,5.22e-07,41;UBERON:0003080,5.22e-07,41;UBERON:0006240,5.22e-07,41;UBERON:0004121,6.19e-07,171;UBERON:0000924,6.19e-07,171;UBERON:0006601,6.19e-07,171 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0,1.0007329835313,0,0.872338524100369,0,0,0.261185628199839,0.245733936501509,0.697801167972428,0.655324116390517,0.263766978228454,0.37129905888014,1.32558950291166,2.01697543935533,3.61616716814386,0.730310090387373,1.46379839637152,0.123121058076788,0.204000691244253,0.940364164434263,0.572471974262113,1.09499540058307,0.376627918784408,0,0.328402357799783,0.0787107813136792,0.393364276848904,0,0.309632246632152,1.83884244895785,1.204823675113,1.10926203050036,0,0,0,0,0.401088894940283,0.434021741431704,0,0,0,0.145398238779565,0,0,0.232429036905685,0.411167888021826,0,0.575384784644301,0.256160706529101,0.47296445977717,0.689491361473237,0.645484683583826,0,0,0.272906150057846,0,0.306083892370903,0,0,1.31940520074686,0,0,0,0.56738522469114,0.622822248995575,0.251248665256743,0,0,0,0.368277635987565,0,0,0,0.209658645508376,0.112328631146495,0.300353785683013,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0.786021525498329,0.411202997999018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.64225599384209,0,0,0,0,1.34140171940727,0.383587685530591,0.361439152384566,0,0.289693037921647,0.795285947051099,1.45990461090791,0.472674085820339,1.55210578223795,0.43917392846563,0.654895377488563,0.364295288292542,0,0.649094787309367,0.522389211897802,1.59549552622638,0,1.14398982156026,0.371457501329565,0.39752481473341,0,0,1.69592382577203,1.67799774483962,1.10047216776027,1.04497483268405,1.55050055501597,1.42306505074684,2.00832367658802,0,0,1.46437234528902,0.367663080345869,0.81014194788176,0.803697554556718,3.59246996201872,0.675668882899933,0,0,1.83201743930407,0,0,0.436094052142534,0,0.25326102332916,0.264818361626438,0.860509862246441,0.709336764396714,1.12135520028461,0,0,0.311211035399766,1.48181739276657,1.47115712802113,0.454072282934794,0,0.234321431833797,0.624320153660641,0,0.448346041655403,0.469737994575059,0.971237666208789,0.842704840213491,0.408308342509787,1.71968044236475,1.03325781175765,1.18800285728205,0.741800787835671,0,0.718618141816238,0.168336113954066,0.375355559615893,0.277064115484183,0,0.612975591598039,1.05166641234618,0,0.179389635688862,0.427114777637135,0,0.600182192168805,0,0.772921620136887,0,0.168776332241266,0.292311015483596,0,0.552299391853796,0.161646056818812,0.710019185033229,0,0.169560592310488,0.773043412653187,0.545492241181669,0.573609190778008,1.21973706129595,0.265059536642971,0.580969714347592,1.0366105501537,0.756962552626885,0.72995471815166,0,0.643240938192885,0,2.3218396401599,1.44375896333917,1.41968160047813,1.18009283054671,0.241011029883482,1.10293972732394,1.30727666455444,0.474541238222193,0.269662616320329,0.784885860501384,1.15424147083917,0.738155454624648,1.40241773803446,0,0,0,2.94848165003288,0.590789906681404,0,0.245976877086227,0.171567810298526,0.878002283269004,0,0.904760751704678,0.833296006426766,0,0,0,0.115930404975077,0.70445216541493,1.44366447761074,1.38895653772983,3.04406643575357,0,0,0,0,0.594524649154913,2.81201501960331,2.18376766658517,0.567100388969546,0.53735113621709,0.290633938513962,0.766765358330422,0,0,0,0,0,0.317489471460845,0,0,0,0.719792448923265,0,1.42913216315289,0.112131084345361,2.1798003441664,0.07333828582095,0.387815147273333,0,0.845302752556,0.26593811658487,1.04007436911366,0.257207374262142,0,0.532844358032199,1.00084595560703,0,0.823240336780769,0,0.710783897485092,0,0.301439377059586,0.871533458600294,0.699810938274399,0,0.502257091432126,0,0,0,0,0.723906533337896,1.02738161275192,0.179060963239896,0,0,0,0,0.76228387266739,0,3.09315525111078,0.335032530668698,1.27587750330633,0,0,0,0.736148950314839,0,0.542530047399471,0.415941723061614,1.96271887676878,1.41932173530541,0.585707074963566,0,2.27407504055985,0,0,0.184369168541703,0.781952530212746,0.195801157462741,0.343143423810856,0,0.862856803274467,0.213455115606889,0,1.66435439510497,0.604780586659361,0.496215615637554,0.306923946576125,1.12264037773229,0.384417447767103,0.511707249066704,0.321707842287215,0,0.462629081407967,0.177561725313127,0.0821271560138091,0.519254429183621,0.813472649219715,0.241718899183244,2.6065841139427,1.10497186723076,0.574072240823034,0.728364672026868,1.31124414959424,0,0.924184045252977,0,1.46139224653261,1.37217117560738,2.27466768141793,1.70093705276516,1.51141141271498,0,0,0,0,0.831076008928724,0.671624264166535,0,0,0.512900250232778,2.29610251989794,0,0.103041011647722,1.00726411300178,0.165018999841176,0.574265537996172,0,0,0.096670718292122,1.07834031980251,0.767518373630648,0.551346289938122,0.644521469209642,2.0302337147992,0.255679882248303,0.534192213880424,1.65284915360978,4.22818148203234,0.382838137483752,2.12431339796655,0,0,0.6970372701606,0.308033580176089,0,0,0.9266210955196,0.286249773483982,0,0.316379424718726,0.762520775695299,0,0.42793898803392,0,1.56989728039846,1.07923474549989,1.92175920815238,0.942499218765491,0.202182481573316,0,0.842516912477962,0,0.974853958525138,0,0.136499911407986,1.83827061539827,1.13008116620243,0,0.6634389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|phase1_expression=0.181678379270557,0.428201047781966,0,1.0007329835313,0,0.872338524100369,0,0,0.261185628199839,0.245733936501509,0.697801167972428,0.655324116390517,0.263766978228454,0.37129905888014,1.32558950291166,2.01697543935533,3.61616716814386,0.730310090387373,1.46379839637152,0.123121058076788,0.204000691244253,0.940364164434263,0.572471974262113,1.09499540058307,0.376627918784408,0,0.328402357799783,0.0787107813136792,0.393364276848904,0,0.309632246632152,1.83884244895785,1.204823675113,1.10926203050036,0,0,0,0,0.401088894940283,0.434021741431704,0,0,0,0.145398238779565,0,0,0.232429036905685,0.411167888021826,0,0.575384784644301,0.256160706529101,0.47296445977717,0.689491361473237,0.645484683583826,0,0,0.272906150057846,0,0.306083892370903,0,0,1.31940520074686,0,0,0,0.56738522469114,0.622822248995575,0.251248665256743,0,0,0,0.368277635987565,0,0,0,0.209658645508376,0.112328631146495,0.300353785683013,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0.786021525498329,0.411202997999018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.64225599384209,0,0,0,0,1.34140171940727,0.383587685530591,0.361439152384566,0,0.289693037921647,0.795285947051099,1.45990461090791,0.472674085820339,1.55210578223795,0.43917392846563,0.654895377488563,0.364295288292542,0,0.649094787309367,0.522389211897802,1.59549552622638,0,1.14398982156026,0.371457501329565,0.39752481473341,0,0,1.69592382577203,1.67799774483962,1.10047216776027,1.04497483268405,1.55050055501597,1.42306505074684,2.00832367658802,0,0,1.46437234528902,0.367663080345869,0.81014194788176,0.803697554556718,3.59246996201872,0.675668882899933,0,0,1.83201743930407,0,0,0.436094052142534,0,0.25326102332916,0.264818361626438,0.860509862246441,0.709336764396714,1.12135520028461,0,0,0.311211035399766,1.48181739276657,1.47115712802113,0.454072282934794,0,0.234321431833797,0.624320153660641,0,0.448346041655403,0.469737994575059,0.971237666208789,0.842704840213491,0.408308342509787,1.71968044236475,1.03325781175765,1.18800285728205,0.741800787835671,0,0.718618141816238,0.168336113954066,0.375355559615893,0.277064115484183,0,0.612975591598039,1.05166641234618,0,0.179389635688862,0.427114777637135,0,0.600182192168805,0,0.772921620136887,0,0.168776332241266,0.292311015483596,0,0.552299391853796,0.161646056818812,0.710019185033229,0,0.169560592310488,0.773043412653187,0.545492241181669,0.573609190778008,1.21973706129595,0.265059536642971,0.580969714347592,1.0366105501537,0.756962552626885,0.72995471815166,0,0.643240938192885,0,2.3218396401599,1.44375896333917,1.41968160047813,1.18009283054671,0.241011029883482,1.10293972732394,1.30727666455444,0.474541238222193,0.269662616320329,0.784885860501384,1.15424147083917,0.738155454624648,1.40241773803446,0,0,0,2.94848165003288,0.590789906681404,0,0.245976877086227,0.171567810298526,0.878002283269004,0,0.904760751704678,0.833296006426766,0,0,0,0.115930404975077,0.70445216541493,1.44366447761074,1.38895653772983,3.04406643575357,0,0,0,0,0.594524649154913,2.81201501960331,2.18376766658517,0.567100388969546,0.53735113621709,0.290633938513962,0.766765358330422,0,0,0,0,0,0.317489471460845,0,0,0,0.719792448923265,0,1.42913216315289,0.112131084345361,2.1798003441664,0.07333828582095,0.387815147273333,0,0.845302752556,0.26593811658487,1.04007436911366,0.257207374262142,0,0.532844358032199,1.00084595560703,0,0.823240336780769,0,0.710783897485092,0,0.301439377059586,0.871533458600294,0.699810938274399,0,0.502257091432126,0,0,0,0,0.723906533337896,1.02738161275192,0.179060963239896,0,0,0,0,0.76228387266739,0,3.09315525111078,0.335032530668698,1.27587750330633,0,0,0,0.736148950314839,0,0.542530047399471,0.415941723061614,1.96271887676878,1.41932173530541,0.585707074963566,0,2.27407504055985,0,0,0.184369168541703,0.781952530212746,0.195801157462741,0.343143423810856,0,0.862856803274467,0.213455115606889,0,1.66435439510497,0.604780586659361,0.496215615637554,0.306923946576125,1.12264037773229,0.384417447767103,0.511707249066704,0.321707842287215,0,0.462629081407967,0.177561725313127,0.0821271560138091,0.519254429183621,0.813472649219715,0.241718899183244,2.6065841139427,1.10497186723076,0.574072240823034,0.728364672026868,1.31124414959424,0,0.924184045252977,0,1.46139224653261,1.37217117560738,2.27466768141793,1.70093705276516,1.51141141271498,0,0,0,0,0.831076008928724,0.671624264166535,0,0,0.512900250232778,2.29610251989794,0,0.103041011647722,1.00726411300178,0.165018999841176,0.574265537996172,0,0,0.096670718292122,1.07834031980251,0.767518373630648,0.551346289938122,0.644521469209642,2.0302337147992,0.255679882248303,0.534192213880424,1.65284915360978,4.22818148203234,0.382838137483752,2.12431339796655,0,0,0.6970372701606,0.308033580176089,0,0,0.9266210955196,0.286249773483982,0,0.316379424718726,0.762520775695299,0,0.42793898803392,0,1.56989728039846,1.07923474549989,1.92175920815238,0.942499218765491,0.202182481573316,0,0.842516912477962,0,0.974853958525138,0,0.136499911407986,1.83827061539827,1.13008116620243,0,0.6634389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| ||
|short_description=p16@APP | |||
}} | }} |
Latest revision as of 23:18, 17 September 2015
Short description: | p16@APP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_APP_5end |
Coexpression cluster: | NA |
Association with transcript: | 26bp_to_ENST00000462267_5end |
EntrezGene: | APP |
HGNC: | 620 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
anatomical conduit | 7.27e-12 | 240 |
neural tube | 1.62e-09 | 56 |
neural rod | 1.62e-09 | 56 |
future spinal cord | 1.62e-09 | 56 |
neural keel | 1.62e-09 | 56 |
neurectoderm | 6.14e-09 | 86 |
structure with developmental contribution from neural crest | 1.39e-08 | 132 |
neural plate | 1.47e-08 | 82 |
presumptive neural plate | 1.47e-08 | 82 |
regional part of nervous system | 1.56e-08 | 53 |
regional part of brain | 1.56e-08 | 53 |
organ system subdivision | 2.54e-08 | 223 |
adult organism | 3.83e-08 | 114 |
central nervous system | 9.90e-08 | 81 |
tube | 1.06e-07 | 192 |
brain grey matter | 1.37e-07 | 34 |
gray matter | 1.37e-07 | 34 |
nervous system | 3.34e-07 | 89 |
regional part of forebrain | 5.22e-07 | 41 |
forebrain | 5.22e-07 | 41 |
anterior neural tube | 5.22e-07 | 41 |
future forebrain | 5.22e-07 | 41 |
ectoderm-derived structure | 6.19e-07 | 171 |
ectoderm | 6.19e-07 | 171 |
presumptive ectoderm | 6.19e-07 | 171 |