FFCP PHASE1:Hg19::chr2:202483867..202483908,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:202483867..202483908,- to FFCP PHASE1:Hg19::chr2:202483867..202483908,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=151254 | |EntrezGene=151254 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14438 | |HGNC=14438 | ||
|TSSclassifier=strong | |||
|UniProt=Q53TS8,E9PGG4,C9IZH7 | |UniProt=Q53TS8,E9PGG4,C9IZH7 | ||
|association_with_transcript=0bp_to_ENST00000286195,ENST00000439140,ENST00000439802,ENST00000450242,NM_001168216,NM_001168217,NM_001168221,NM_152525,uc002uye.2,uc002uyf.2,uc010fti.2_5end | |||
|cluster_id=chr2:202483867..202483908,- | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_1_at_ALS2CR11_5end | |||
|id=chr2:202483867..202483908,- | |||
|ontology_enrichment_celltype=CL:0000055!2.48e-17!180;CL:0000057!2.62e-17!75;CL:0002620!9.40e-08!23;CL:0000680!4.93e-07!57;CL:0000056!4.93e-07!57;CL:0000355!4.93e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0000057;1.84e-07;73!CL:0002334;3.93e-07;12!CL:0002556;4.80e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.68e-16,76;CL:0002556,3.36e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!1.09e-17!365;UBERON:0002616!9.84e-15!59;UBERON:0007023!2.30e-14!115;UBERON:0001049!8.73e-14!57;UBERON:0005068!8.73e-14!57;UBERON:0006241!8.73e-14!57;UBERON:0007135!8.73e-14!57;UBERON:0000119!2.58e-12!312;UBERON:0000483!1.52e-11!309;UBERON:0003075!6.51e-11!86;UBERON:0007284!6.51e-11!86;UBERON:0000033!7.32e-11!123;UBERON:0000153!1.20e-10!129;UBERON:0007811!1.20e-10!129;UBERON:0000481!1.44e-10!347;UBERON:0000955!3.14e-10!69;UBERON:0006238!3.14e-10!69;UBERON:0002780!4.34e-10!41;UBERON:0001890!4.34e-10!41;UBERON:0006240!4.34e-10!41;UBERON:0000914!7.77e-10!83;UBERON:0002329!7.77e-10!83;UBERON:0003077!7.77e-10!83;UBERON:0003059!7.77e-10!83;UBERON:0007282!7.77e-10!83;UBERON:0009618!7.77e-10!83;UBERON:0007285!7.77e-10!83;UBERON:0003080!1.48e-09!42;UBERON:0002346!1.50e-09!90;UBERON:0001017!4.59e-09!82;UBERON:0000477!5.13e-09!286;UBERON:0004121!6.75e-09!169;UBERON:0000468!8.23e-09!659;UBERON:0000073!1.36e-08!94;UBERON:0001016!1.36e-08!94;UBERON:0005743!1.72e-08!86;UBERON:0007100!2.23e-08!27;UBERON:0000924!4.39e-08!173;UBERON:0006601!4.39e-08!173;UBERON:0003102!4.63e-08!95;UBERON:0000025!1.19e-07!194;UBERON:0002199!1.25e-07!45;UBERON:0002416!1.25e-07!45;UBERON:0004290!2.56e-07!70;UBERON:0003056!3.22e-07!61;UBERON:0000948!4.13e-07!24;UBERON:0005498!4.13e-07!24;UBERON:0004140!4.13e-07!24;UBERON:0009881!4.13e-07!24;UBERON:0004141!4.13e-07!24;UBERON:0003084!4.13e-07!24;UBERON:0007005!4.13e-07!24;UBERON:0004139!4.13e-07!24;UBERON:0004291!4.13e-07!24;UBERON:0004111!5.49e-07!241;UBERON:0000062!5.68e-07!511;UBERON:0002020!6.85e-07!34;UBERON:0003528!6.85e-07!34;UBERON:0000486!7.03e-07!82;UBERON:0002385!7.75e-07!63;UBERON:0001015!7.75e-07!63;UBERON:0000383!7.75e-07!63 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;3.37e-09;25!UBERON:0000948;3.14e-08;22!UBERON:0002298;1.45e-07;6!UBERON:0001758;4.80e-07;6!UBERON:0003672;4.80e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,3.34e-14,132;UBERON:0007100,1.44e-09,27;UBERON:0001049,1.63e-09,56;UBERON:0005068,1.63e-09,56;UBERON:0006241,1.63e-09,56;UBERON:0007135,1.63e-09,56;UBERON:0000073,1.43e-08,53;UBERON:0002616,1.43e-08,53;UBERON:0007023,1.59e-08,114;UBERON:0000948,1.59e-08,24;UBERON:0005498,1.59e-08,24;UBERON:0004140,1.59e-08,24;UBERON:0009881,1.59e-08,24;UBERON:0004141,1.59e-08,24;UBERON:0003084,1.59e-08,24;UBERON:0007005,1.59e-08,24;UBERON:0004139,1.59e-08,24;UBERON:0004291,1.59e-08,24;UBERON:0000119,1.70e-08,309;UBERON:0000955,4.61e-08,68;UBERON:0006238,4.61e-08,68;UBERON:0003075,6.09e-08,82;UBERON:0007284,6.09e-08,82;UBERON:0000483,1.01e-07,306;UBERON:0002298,1.11e-07,6;UBERON:0001017,2.66e-07,81;UBERON:0001758,3.36e-07,6;UBERON:0003672,3.36e-07,6;UBERON:0002346,3.96e-07,86;UBERON:0001016,7.60e-07,89;UBERON:0010371,8.10e-07,104 | |||
|phase1_expression=0.726713517082227,2.5692062866918,0.563817616383885,1.0007329835313,0.893922188854576,1.74467704820074,5.06599756336621,1.89515962028049,0,0.491467873003018,0.697801167972428,0,0,0.990130823680373,0.662794751455832,0,0,0,0,0.61560529038394,0.204000691244253,0,0,0.410623275218653,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0.569212969109448,0,0,1.32171328579026,1.12101712596307,0.263384084775077,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,4.87613732627923,1.34140171940727,2.55725123687061,0.361439152384566,0,1.01392563272577,1.5905718941022,0.973269740605272,0.378139268656271,0.886917589850256,0.087834785693126,13.8837820027575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.446498641420399,0.22452937262617,0.112611480483322,0,0,0,0,0,0,1.49091585508596,0.759783069987479,4.76673050927588,0.286836620748814,0,1.68203280042692,0,0,2.8008993185979,1.88594940897563,1.30769522490767,0.756787138224657,1.15235184896,0,0.624320153660641,1.71141546463335,1.04614076386261,0.469737994575059,0.323745888736263,0.702254033511242,5.51216262388212,2.82518929817066,6.19954687054593,3.56400857184616,1.23633464639278,0,0,2.86171393721913,2.50237039743928,4.43302584774693,1.75591048352335,4.29082914118628,3.00476117813194,1.24775401476023,0.358779271377724,0,0.847727604638247,2.70081986475962,3.81294358182224,1.03056216018252,1.30281799432113,0.506328996723799,0.68205903612839,2.27190396819703,0.460249493211497,1.77810662500693,2.84007674013291,2.11579406278045,1.18692414617341,0,0.545492241181669,0.286804595389004,0.243947412259191,0.397589304964456,0.232387885739037,0,0,0,0,1.92972281457866,0,2.78620756819187,0.721879481669586,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0.8231480226628,1.47008711385542,0,0,0,0,0,0.857839051492628,0.109750285408626,0,0.201057944823262,0.185176890317059,0,1.03993478527958,0,0.34779121492523,0.821860859650752,0,0.462985512576611,0,0,0,0,0,0,0,0.503946384596579,0,0,0.290633938513962,0,0,0,0,0,0,0.888970520090367,0.763976851116555,0,0,1.43958489784653,0,0,1.00917975910825,3.05172048183296,1.1734125731352,0.387815147273333,3.57656445851882,0,0.26593811658487,0,1.54324424557285,0,0.799266537048298,4.57529579706072,0,1.64648067356154,2.28015329005615,3.19852753868291,2.37585561880029,0,0,0.799783929456456,0,0,0,0,1.14861935834114,0,1.88215698667853,0.410952645100767,1.25342674267927,0,0,0,0,0,0,0,0,0,0,0,0,0.858840442033979,2.00068208423871,1.08506009479894,0.207970861530807,0.356857977594324,0.473107245101804,1.05427273493442,0.601892199455438,0,0,1.32845119707087,0.184369168541703,1.73767228936166,0,0,0,0.215714200818617,0.106727557803444,0,0,0,0.496215615637554,2.30192959932094,1.12264037773229,1.02511319404561,1.02341449813341,1.12597744800525,0,2.00472601943452,1.59805552781814,4.43486642474569,3.63478100428535,3.48631135379878,0,0,0.184161977871793,0.574072240823034,0,0.655622074797121,0,0.231046011313244,0,0,0.105551628892876,0,0.170093705276516,1.29549549661284,0,0,0,0,0,0,0,0,0,0,0,0.9273691048295,0.183138929636687,0.082509499920588,0,0,0,0.096670718292122,1.23238893691716,1.22802939780904,1.65403886981437,3.75970857038958,2.32026710262766,1.61930592090592,0.445160178233687,0,0,0.127612712494584,0,2.78907329578371,2.83331112147576,3.485186350803,0.616067160352178,0,1.73986598415015,0.18532421910392,0.286249773483982,4.83805880167568,5.06207079549961,3.8126038784765,0,2.56763392820352,1.90921948755562,0,1.97859703341646,2.47083326762449,1.53156123049392,0.404364963146632,1.58510321173008,0.842516912477962,1.46290121726877,0.487426979262569,0,0.818999468447914,0.282810863907425,0,0,0,0.438450885253763,1.15755106853338,1.31178950409327,0,0.30982349809975,0,1.14729081763241,0.589494246078727,0,0.354761064070598,1.05553817648832,0.658589785919804,0,1.74967360122491,0,0,0,0.941438007767792,0.43050537267123,1.68471475667626,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0.307240764308458,0.447352215784832,0.333698283423817,0,0,0,0,0,0,0,1.17206543417515,0,0,0,0,0,0,1.9882952955326,1.26602474769461,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0.197286811273867,0,4.44547960578548,0,1.02044907978036,0,0,0,0,0,1.77977555204936,0,7.23961083807076,0,0,2.65722415744152,0.964771509003264,0,0.884634079449797,1.18219047581419,0.87754158861589,0,0,0.153900517007594,0,0.46112780877612,0.179515288819544,0,0,0.457987967009312,0,0,0,0,0,0,0,0,0,0,2.28525931422807,0,1.94749775767882,0,0.530745387020035,0,0,0,0,1.61762719153625,0.802577647298789,0.937057782901357,0,0,0,0.394584402849391,0,0.61214552326098,1.83241080922615,0,0,0,0,0,0,0,0,0,0,0,0.698906672968121,0,0,0,0,0.678923115418936,0,0.677942222341597,0,2.98071917554485,1.2029051231617,2.34661659281764,0,1.06726497369676,0,0,0,5.66263492944483,0,0,0,0,0,0,0,1.20084057741958,1.9166753044879,0,0,0,2.51354161145029,5.9581710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| 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| ||
|short_description=p1@ALS2CR11 | |||
}} | }} |
Latest revision as of 13:28, 19 September 2015
Short description: | p1@ALS2CR11 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ALS2CR11_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_ENST00000286195, ENST00000439140, ENST00000439802, ENST00000450242, NM_001168216, NM_001168217, NM_001168221, NM_152525, uc002uye.2, uc002uyf.2, uc010fti.2_5end |
EntrezGene: | ALS2CR11 |
HGNC: | 14438 |
UniProt: | Q53TS8E9PGG4C9IZH7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.68e-16 | 76 |
fibroblast of periodontium | 3.36e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 3.34e-14 | 132 |
primary circulatory organ | 1.44e-09 | 27 |
neural tube | 1.63e-09 | 56 |
neural rod | 1.63e-09 | 56 |
future spinal cord | 1.63e-09 | 56 |
neural keel | 1.63e-09 | 56 |
regional part of nervous system | 1.43e-08 | 53 |
regional part of brain | 1.43e-08 | 53 |
adult organism | 1.59e-08 | 114 |
heart | 1.59e-08 | 24 |
primitive heart tube | 1.59e-08 | 24 |
primary heart field | 1.59e-08 | 24 |
anterior lateral plate mesoderm | 1.59e-08 | 24 |
heart tube | 1.59e-08 | 24 |
heart primordium | 1.59e-08 | 24 |
cardiac mesoderm | 1.59e-08 | 24 |
cardiogenic plate | 1.59e-08 | 24 |
heart rudiment | 1.59e-08 | 24 |
cell layer | 1.70e-08 | 309 |
brain | 4.61e-08 | 68 |
future brain | 4.61e-08 | 68 |
neural plate | 6.09e-08 | 82 |
presumptive neural plate | 6.09e-08 | 82 |
epithelium | 1.01e-07 | 306 |
brainstem | 1.11e-07 | 6 |
central nervous system | 2.66e-07 | 81 |
periodontium | 3.36e-07 | 6 |
dentition | 3.36e-07 | 6 |
neurectoderm | 3.96e-07 | 86 |
nervous system | 7.60e-07 | 89 |
ecto-epithelium | 8.10e-07 | 104 |