FFCP PHASE1:Hg19::chr2:211341411..211341499,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:211341411..211341499,- to FFCP PHASE1:Hg19::chr2:211341411..211341499,-: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10314 | |EntrezGene=10314 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6508 | |HGNC=6508 | ||
|TSSclassifier=strong | |||
|UniProt=O43813,F8WDS9,Q53TN2,B2R602 | |UniProt=O43813,F8WDS9,Q53TN2,B2R602 | ||
|association_with_transcript=0bp_to_ENST00000233714,ENST00000431941,ENST00000441020,ENST00000443314,ENST00000450366,ENST00000453956,NM_001136574,NM_001136575,NM_006055,uc002ved.2,uc010fuq.2,uc010zjh.1_5end | |||
|cluster_id=chr2:211341411..211341499,- | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_1_at_LANCL1_5end | |||
|id=chr2:211341411..211341499,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.15e-12;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.14e-31!94;UBERON:0001016!1.14e-31!94;UBERON:0005743!6.17e-31!86;UBERON:0001017!1.06e-30!82;UBERON:0000955!1.64e-28!69;UBERON:0006238!1.64e-28!69;UBERON:0000924!9.02e-28!173;UBERON:0006601!9.02e-28!173;UBERON:0001049!2.08e-27!57;UBERON:0005068!2.08e-27!57;UBERON:0006241!2.08e-27!57;UBERON:0007135!2.08e-27!57;UBERON:0004121!1.68e-26!169;UBERON:0002616!1.10e-24!59;UBERON:0002346!6.07e-24!90;UBERON:0000153!2.54e-23!129;UBERON:0007811!2.54e-23!129;UBERON:0003080!4.15e-23!42;UBERON:0002780!4.74e-23!41;UBERON:0001890!4.74e-23!41;UBERON:0006240!4.74e-23!41;UBERON:0003075!1.02e-22!86;UBERON:0007284!1.02e-22!86;UBERON:0000033!5.17e-22!123;UBERON:0007023!1.15e-21!115;UBERON:0001893!3.60e-20!34;UBERON:0002020!4.88e-20!34;UBERON:0003528!4.88e-20!34;UBERON:0002791!1.75e-19!33;UBERON:0001869!8.48e-19!32;UBERON:0003056!5.05e-18!61;UBERON:0000956!2.47e-14!25;UBERON:0000203!2.47e-14!25;UBERON:0000475!9.46e-14!365;UBERON:0002619!3.02e-13!22;UBERON:0001950!4.09e-12!20;UBERON:0000064!1.29e-11!219;UBERON:0000481!3.40e-10!347;UBERON:0000477!7.60e-08!286;UBERON:0002308!3.16e-07!9;UBERON:0000125!3.16e-07!9;UBERON:0002420!3.64e-07!9;UBERON:0007245!3.64e-07!9;UBERON:0010009!3.64e-07!9;UBERON:0010011!3.64e-07!9;UBERON:0000454!3.64e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;1.40e-17;34!UBERON:0003528;3.02e-17;34!UBERON:0002020;3.02e-17;34!UBERON:0002791;4.82e-17;32!UBERON:0001869;4.99e-17;32!UBERON:0002780;1.21e-16;41!UBERON:0001890;1.21e-16;41!UBERON:0000073;2.30e-15;53!UBERON:0002616;2.30e-15;53!UBERON:0000956;2.30e-14;25!UBERON:0000203;2.30e-14;25!UBERON:0000955;1.70e-13;68!UBERON:0002619;2.91e-13;22!UBERON:0001017;4.48e-13;75!UBERON:0001950;3.96e-12;20!UBERON:0001016;5.40e-12;83!UBERON:0000125;3.11e-07;9!UBERON:0002308;3.11e-07;9!UBERON:0002420;3.59e-07;9!UBERON:0007245;3.59e-07;9!UBERON:0010009;3.59e-07;9!UBERON:0010011;3.59e-07;9!UBERON:0000454;3.59e-07;9!UBERON:0007023;6.33e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,3.21e-31,89;UBERON:0001017,1.48e-30,81;UBERON:0011216,2.12e-28,223;UBERON:0000955,2.18e-28,68;UBERON:0006238,2.18e-28,68;UBERON:0004121,7.43e-28,171;UBERON:0000924,7.43e-28,171;UBERON:0006601,7.43e-28,171;UBERON:0001049,2.57e-27,56;UBERON:0005068,2.57e-27,56;UBERON:0006241,2.57e-27,56;UBERON:0007135,2.57e-27,56;UBERON:0000073,2.10e-25,53;UBERON:0002616,2.10e-25,53;UBERON:0002346,8.97e-24,86;UBERON:0002780,4.74e-23,41;UBERON:0001890,4.74e-23,41;UBERON:0003080,4.74e-23,41;UBERON:0006240,4.74e-23,41;UBERON:0010371,9.75e-23,104;UBERON:0003075,1.50e-22,82;UBERON:0007284,1.50e-22,82;UBERON:0007023,3.72e-21,114;UBERON:0001893,3.60e-20,34;UBERON:0003528,4.88e-20,34;UBERON:0002020,4.88e-20,34;UBERON:0001869,8.48e-19,32;UBERON:0002791,8.58e-19,32;UBERON:0003056,1.76e-18,61;UBERON:0010314,7.79e-16,132;UBERON:0000956,2.47e-14,25;UBERON:0000203,2.47e-14,25;UBERON:0002619,3.02e-13,22;UBERON:0001950,4.09e-12,20;UBERON:0000125,3.16e-07,9;UBERON:0002308,3.16e-07,9;UBERON:0002420,3.64e-07,9;UBERON:0007245,3.64e-07,9;UBERON:0010009,3.64e-07,9;UBERON:0010011,3.64e-07,9;UBERON:0000454,3.64e-07,9 | |||
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| ||
|short_description=p1@LANCL1 | |||
}} | }} |
Latest revision as of 22:10, 19 September 2015
Short description: | p1@LANCL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LANCL1_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 0bp_to_ENST00000233714, ENST00000431941, ENST00000441020, ENST00000443314, ENST00000450366, ENST00000453956, NM_001136574, NM_001136575, NM_006055, uc002ved.2, uc010fuq.2, uc010zjh.1_5end |
EntrezGene: | LANCL1 |
HGNC: | 6508 |
UniProt: | O43813F8WDS9Q53TN2B2R602 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data