FFCP PHASE1:Hg19::chr4:8442496..8442541,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr4:8442496..8442541,+ to FFCP PHASE1:Hg19::chr4:8442496..8442541,+: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=152992 | |EntrezGene=152992 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26653 | |HGNC=26653 | ||
|TSSclassifier=strong | |||
|UniProt=Q8IYL2 | |UniProt=Q8IYL2 | ||
|association_with_transcript=0bp_to_ENST00000528167,NM_152544_5end | |||
|cluster_id=chr4:8442496..8442541,+ | |||
|description=CAGE_peak_1_at_METTL19_5end | |||
|id=chr4:8442496..8442541,+ | |||
|ontology_enrichment_celltype=CL:0000838!4.17e-11!52;CL:0000542!9.35e-11!53;CL:0000051!9.35e-11!53;CL:0000791!1.37e-08!18;CL:0000789!1.37e-08!18;CL:0002420!1.37e-08!18;CL:0002419!1.37e-08!18;CL:0000790!1.37e-08!18;CL:0000084!3.96e-08!25;CL:0000827!3.96e-08!25;CL:0000625!7.35e-07!11;CL:0000988!9.41e-07!182 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.46e-08;18!CL:0000789;1.46e-08;18!CL:0002419;1.46e-08;18!CL:0000084;6.08e-08;25!CL:0000542;4.80e-07;53!CL:0000625;7.54e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,4.17e-11,52;CL:0000542,9.35e-11,53;CL:0000051,9.35e-11,53;CL:0000791,1.37e-08,18;CL:0000789,1.37e-08,18;CL:0002420,1.37e-08,18;CL:0002419,1.37e-08,18;CL:0000790,1.37e-08,18;CL:0000084,3.96e-08,25;CL:0000827,3.96e-08,25;CL:0000988,1.42e-07,177;CL:0000037,5.36e-07,168;CL:0000625,7.35e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000790;1.46e-08;18!CL:0000051;4.80e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.27e-16!57;UBERON:0005068!3.27e-16!57;UBERON:0006241!3.27e-16!57;UBERON:0007135!3.27e-16!57;UBERON:0007023!1.50e-15!115;UBERON:0002780!4.53e-15!41;UBERON:0001890!4.53e-15!41;UBERON:0006240!4.53e-15!41;UBERON:0003080!4.60e-15!42;UBERON:0001893!3.67e-14!34;UBERON:0002616!4.66e-14!59;UBERON:0002791!9.12e-14!33;UBERON:0002020!2.00e-13!34;UBERON:0003528!2.00e-13!34;UBERON:0001869!3.18e-13!32;UBERON:0003056!7.34e-13!61;UBERON:0002346!1.25e-12!90;UBERON:0003075!2.71e-12!86;UBERON:0007284!2.71e-12!86;UBERON:0005743!3.34e-12!86;UBERON:0000073!4.45e-12!94;UBERON:0001016!4.45e-12!94;UBERON:0001017!5.72e-12!82;UBERON:0000955!6.13e-12!69;UBERON:0006238!6.13e-12!69;UBERON:0002619!5.10e-11!22;UBERON:0000956!2.58e-10!25;UBERON:0000203!2.58e-10!25;UBERON:0001950!3.19e-10!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;2.38e-12;34!UBERON:0001869;4.36e-12;32!UBERON:0002791;4.39e-12;32!UBERON:0003528;5.58e-12;34!UBERON:0002020;5.58e-12;34!UBERON:0002780;2.12e-11;41!UBERON:0001890;2.12e-11;41!UBERON:0002619;3.62e-11;22!UBERON:0000956;1.60e-10;25!UBERON:0000203;1.60e-10;25!UBERON:0000073;2.16e-10;53!UBERON:0002616;2.16e-10;53!UBERON:0001950;2.28e-10;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.13e-16,53;UBERON:0002616,2.13e-16,53;UBERON:0001049,3.49e-16,56;UBERON:0005068,3.49e-16,56;UBERON:0006241,3.49e-16,56;UBERON:0007135,3.49e-16,56;UBERON:0007023,4.13e-15,114;UBERON:0002780,4.53e-15,41;UBERON:0001890,4.53e-15,41;UBERON:0003080,4.53e-15,41;UBERON:0006240,4.53e-15,41;UBERON:0001893,3.67e-14,34;UBERON:0002346,9.12e-14,86;UBERON:0003075,1.91e-13,82;UBERON:0007284,1.91e-13,82;UBERON:0003528,2.00e-13,34;UBERON:0002020,2.00e-13,34;UBERON:0003056,2.68e-13,61;UBERON:0002791,3.09e-13,32;UBERON:0001869,3.18e-13,32;UBERON:0001017,6.82e-12,81;UBERON:0000955,7.18e-12,68;UBERON:0006238,7.18e-12,68;UBERON:0001016,9.54e-12,89;UBERON:0002619,5.10e-11,22;UBERON:0000956,2.58e-10,25;UBERON:0000203,2.58e-10,25;UBERON:0001950,3.19e-10,20;UBERON:0010371,4.32e-09,104 | |||
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|short_description=p1@METTL19 | |||
}} | }} |
Latest revision as of 02:21, 19 September 2015
Short description: | p1@METTL19 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_METTL19_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000528167, NM_152544_5end |
EntrezGene: | METTL19 |
HGNC: | 26653 |
UniProt: | Q8IYL2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 4.17e-11 | 52 |
lymphocyte | 9.35e-11 | 53 |
common lymphoid progenitor | 9.35e-11 | 53 |
mature alpha-beta T cell | 1.37e-08 | 18 |
alpha-beta T cell | 1.37e-08 | 18 |
immature T cell | 1.37e-08 | 18 |
mature T cell | 1.37e-08 | 18 |
immature alpha-beta T cell | 1.37e-08 | 18 |
T cell | 3.96e-08 | 25 |
pro-T cell | 3.96e-08 | 25 |
hematopoietic cell | 1.42e-07 | 177 |
hematopoietic stem cell | 5.36e-07 | 168 |
CD8-positive, alpha-beta T cell | 7.35e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 2.13e-16 | 53 |
regional part of brain | 2.13e-16 | 53 |
neural tube | 3.49e-16 | 56 |
neural rod | 3.49e-16 | 56 |
future spinal cord | 3.49e-16 | 56 |
neural keel | 3.49e-16 | 56 |
adult organism | 4.13e-15 | 114 |
regional part of forebrain | 4.53e-15 | 41 |
forebrain | 4.53e-15 | 41 |
anterior neural tube | 4.53e-15 | 41 |
future forebrain | 4.53e-15 | 41 |
telencephalon | 3.67e-14 | 34 |
neurectoderm | 9.12e-14 | 86 |
neural plate | 1.91e-13 | 82 |
presumptive neural plate | 1.91e-13 | 82 |
brain grey matter | 2.00e-13 | 34 |
gray matter | 2.00e-13 | 34 |
pre-chordal neural plate | 2.68e-13 | 61 |
regional part of telencephalon | 3.09e-13 | 32 |
cerebral hemisphere | 3.18e-13 | 32 |
central nervous system | 6.82e-12 | 81 |
brain | 7.18e-12 | 68 |
future brain | 7.18e-12 | 68 |
nervous system | 9.54e-12 | 89 |
regional part of cerebral cortex | 5.10e-11 | 22 |
cerebral cortex | 2.58e-10 | 25 |
pallium | 2.58e-10 | 25 |
neocortex | 3.19e-10 | 20 |
ecto-epithelium | 4.32e-09 | 104 |