FFCP PHASE1:Hg19::chr5:178772424..178772486,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr5:178772424..178772486,- to FFCP PHASE1:Hg19::chr5:178772424..178772486,-: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9509 | |EntrezGene=9509 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=218 | |HGNC=218 | ||
|TSSclassifier=strong | |||
|UniProt=O95450 | |UniProt=O95450 | ||
|association_with_transcript=0bp_to_ENST00000251582,ENST00000274609,NM_014244,NM_021599_5end | |||
|cluster_id=chr5:178772424..178772486,- | |||
|coexpression_cluster_id=C1530 | |||
|description=CAGE_peak_1_at_ADAMTS2_5end | |||
|id=chr5:178772424..178772486,- | |||
|ontology_enrichment_celltype=CL:0000055!4.68e-40!180;CL:0000057!3.53e-24!75;CL:0000680!1.67e-16!57;CL:0000056!1.67e-16!57;CL:0000355!1.67e-16!57;CL:0000187!3.71e-15!54;CL:0000183!8.76e-15!59;CL:0000393!7.20e-13!60;CL:0000211!7.20e-13!60;CL:0000192!1.51e-10!42;CL:0000514!1.51e-10!42;CL:0000048!2.46e-10!430;CL:0000034!1.43e-09!444;CL:0000723!1.47e-09!436;CL:0000136!1.65e-09!15;CL:0000222!4.86e-08!119;CL:0002334!8.75e-08!12;CL:0000359!3.39e-07!32;CL:0002620!8.21e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0000134;6.20e-11;55!CL:0000057;9.52e-11;73!CL:0000187;1.32e-09;55!CL:0000723;1.94e-09;61!CL:0000048;4.05e-09;58!CL:0000136;6.47e-09;13!CL:0002320;1.53e-08;188!CL:0002334;3.19e-08;12!CL:0000192;3.37e-08;43!CL:0000393;1.15e-07;61!CL:0000211;1.15e-07;61!CL:0002620;2.97e-07;23!CL:0000349;4.15e-07;19!CL:0000034;4.60e-07;69!CL:0000359;8.52e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.48e-26,76;CL:0000680,1.10e-17,58;CL:0000056,1.10e-17,58;CL:0000355,1.10e-17,58;CL:0000187,3.01e-16,55;CL:0000048,1.82e-13,427;CL:0000393,2.20e-13,61;CL:0000211,2.20e-13,61;CL:0000723,1.96e-12,433;CL:0000034,2.46e-12,441;CL:0000192,2.56e-11,43;CL:0000514,2.56e-11,43;CL:0000136,4.61e-10,15;CL:0002334,3.22e-08,12;CL:0000222,4.20e-08,121;CL:0002620,2.75e-07,23;CL:0000359,2.96e-07,32;CL:0000349,4.30e-07,19 | |||
|ontology_enrichment_development_v019=CL:0000355;4.24e-10;58!CL:0000514;3.37e-08;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!2.66e-19!83;UBERON:0002329!2.66e-19!83;UBERON:0003077!2.66e-19!83;UBERON:0003059!2.66e-19!83;UBERON:0007282!2.66e-19!83;UBERON:0009618!2.66e-19!83;UBERON:0007285!2.66e-19!83;UBERON:0004290!1.15e-18!70;UBERON:0002385!2.72e-17!63;UBERON:0001015!2.72e-17!63;UBERON:0000383!2.72e-17!63;UBERON:0001134!2.85e-17!61;UBERON:0002036!2.85e-17!61;UBERON:0003082!2.85e-17!61;UBERON:0000486!5.22e-14!82;UBERON:0005256!1.01e-12!143;UBERON:0000475!1.99e-10!365;UBERON:0002100!2.59e-09!216;UBERON:0001013!9.81e-09!14;UBERON:0000468!1.69e-08!659;UBERON:0002204!1.35e-07!167;UBERON:0002199!2.34e-07!45;UBERON:0002416!2.34e-07!45;UBERON:0007100!3.25e-07!27;UBERON:0000948!3.49e-07!24;UBERON:0005498!3.49e-07!24;UBERON:0004140!3.49e-07!24;UBERON:0009881!3.49e-07!24;UBERON:0004141!3.49e-07!24;UBERON:0003084!3.49e-07!24;UBERON:0007005!3.49e-07!24;UBERON:0004139!3.49e-07!24;UBERON:0004291!3.49e-07!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;3.08e-09;14!UBERON:0002384;6.57e-09;198!UBERON:0002385;1.04e-08;31!UBERON:0001015;1.04e-08;31!UBERON:0000383;1.04e-08;31!UBERON:0001134;3.69e-07;16!UBERON:0002036;3.69e-07;16!UBERON:0007100;4.53e-07;25!UBERON:0000948;5.13e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,3.59e-20,73;UBERON:0002329,5.20e-20,71;UBERON:0003059,5.20e-20,71;UBERON:0007282,5.20e-20,71;UBERON:0004290,5.20e-20,71;UBERON:0009618,5.20e-20,71;UBERON:0003077,9.37e-20,72;UBERON:0007285,9.37e-20,72;UBERON:0002385,1.55e-18,64;UBERON:0001015,1.55e-18,64;UBERON:0000383,1.55e-18,64;UBERON:0001134,1.64e-18,62;UBERON:0002036,1.64e-18,62;UBERON:0003082,1.64e-18,62;UBERON:0007503,3.98e-17,78;UBERON:0000486,5.01e-15,83;UBERON:0005256,3.89e-14,122;UBERON:0003104,5.67e-13,160;UBERON:0009142,5.67e-13,160;UBERON:0000926,7.60e-11,315;UBERON:0004120,7.60e-11,315;UBERON:0006603,7.60e-11,315;UBERON:0001013,3.11e-09,14;UBERON:0002100,1.26e-08,199;UBERON:0002199,8.30e-08,46;UBERON:0002416,8.30e-08,46;UBERON:0007100,1.31e-07,27;UBERON:0000948,1.41e-07,24;UBERON:0005498,1.41e-07,24;UBERON:0004140,1.41e-07,24;UBERON:0009881,1.41e-07,24;UBERON:0004141,1.41e-07,24;UBERON:0003084,1.41e-07,24;UBERON:0007005,1.41e-07,24;UBERON:0004139,1.41e-07,24;UBERON:0004291,1.41e-07,24;UBERON:0004923,4.03e-07,66;UBERON:0002204,4.24e-07,167 | |||
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| ||
|short_description=p1@ADAMTS2 | |||
}} | }} |
Latest revision as of 08:18, 17 September 2015
Short description: | p1@ADAMTS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ADAMTS2_5end |
Coexpression cluster: | C1530_Mesenchymal_Adipocyte_osteoclastoma_Fibroblast_Preadipocyte_Hepatic_Osteoblast |
Association with transcript: | 0bp_to_ENST00000251582, ENST00000274609, NM_014244, NM_021599_5end |
EntrezGene: | ADAMTS2 |
HGNC: | 218 |
UniProt: | O95450 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.48e-26 | 76 |
muscle precursor cell | 1.10e-17 | 58 |
myoblast | 1.10e-17 | 58 |
multi-potent skeletal muscle stem cell | 1.10e-17 | 58 |
muscle cell | 3.01e-16 | 55 |
multi fate stem cell | 1.82e-13 | 427 |
electrically responsive cell | 2.20e-13 | 61 |
electrically active cell | 2.20e-13 | 61 |
somatic stem cell | 1.96e-12 | 433 |
stem cell | 2.46e-12 | 441 |
smooth muscle cell | 2.56e-11 | 43 |
smooth muscle myoblast | 2.56e-11 | 43 |
fat cell | 4.61e-10 | 15 |
preadipocyte | 3.22e-08 | 12 |
mesodermal cell | 4.20e-08 | 121 |
skin fibroblast | 2.75e-07 | 23 |
vascular associated smooth muscle cell | 2.96e-07 | 32 |
extraembryonic cell | 4.30e-07 | 19 |