FFCP PHASE1:Hg19::chr6:30652445..30652456,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr6:30652445..30652456,- to FFCP PHASE1:Hg19::chr6:30652445..30652456,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=170954 | |EntrezGene=170954 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=29413 | |HGNC=29413 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=6bp_to_BC023314_5end | |||
|cluster_id=chr6:30652445..30652456,- | |||
|coexpression_cluster_id=C4589 | |||
|description=CAGE_peak_14_at_PPP1R18_5end | |||
|id=chr6:30652445..30652456,- | |||
|ontology_enrichment_celltype=CL:0000037!1.39e-47!172;CL:0000566!1.39e-47!172;CL:0002032!2.81e-47!165;CL:0000837!2.81e-47!165;CL:0000988!4.06e-46!182;CL:0000738!3.69e-42!140;CL:0002087!3.81e-38!119;CL:0002031!1.41e-36!124;CL:0000763!1.41e-27!112;CL:0000049!1.41e-27!112;CL:0000766!1.16e-24!76;CL:0002057!7.39e-20!42;CL:0000557!1.48e-19!71;CL:0002194!1.84e-18!63;CL:0000576!1.84e-18!63;CL:0000040!1.84e-18!63;CL:0000559!1.84e-18!63;CL:0000838!1.99e-18!52;CL:0000839!3.36e-18!70;CL:0002009!5.65e-18!65;CL:0000542!1.22e-17!53;CL:0000051!1.22e-17!53;CL:0000860!4.09e-17!45;CL:0000048!7.56e-14!430;CL:0000134!8.34e-14!358;CL:0000723!1.24e-13!436;CL:0000034!1.36e-13!444;CL:0002320!3.90e-13!365;CL:0000791!9.06e-11!18;CL:0000789!9.06e-11!18;CL:0002420!9.06e-11!18;CL:0002419!9.06e-11!18;CL:0000790!9.06e-11!18;CL:0000084!1.52e-09!25;CL:0000827!1.52e-09!25;CL:0000219!1.86e-09!390;CL:0000625!7.13e-09!11;CL:0000945!2.19e-08!24;CL:0000826!2.19e-08!24;CL:0000094!4.10e-07!8;CL:0000236!6.35e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.60e-22;33!CL:0002057;1.60e-22;33!CL:0000473;1.67e-21;39!CL:0000234;1.67e-21;39!CL:0000576;5.76e-19;48!CL:0000766;1.17e-15;69!CL:0002087;5.46e-15;104!CL:0000791;3.25e-14;18!CL:0000789;3.25e-14;18!CL:0002419;3.25e-14;18!CL:0000763;4.76e-14;100!CL:0000625;1.32e-13;11!CL:0000542;1.66e-13;53!CL:0000738;5.87e-13;136!CL:0000084;1.37e-12;25!CL:0000236;5.71e-11;13!CL:0000988;1.05e-10;177!CL:0000094;1.33e-10;8!CL:0000945;5.08e-08;24!CL:0000071;3.80e-07;18!CL:0000081;4.24e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,5.89e-66,168;CL:0002032,5.32e-64,161;CL:0000837,5.32e-64,161;CL:0000988,1.15e-60,177;CL:0000738,3.82e-59,136;CL:0002087,4.99e-56,115;CL:0002031,5.27e-51,120;CL:0000763,2.67e-39,108;CL:0000049,2.67e-39,108;CL:0000766,4.88e-39,72;CL:0000473,5.49e-34,48;CL:0000234,5.49e-34,48;CL:0000860,2.60e-31,42;CL:0002057,2.60e-31,42;CL:0002194,4.82e-31,59;CL:0000576,4.82e-31,59;CL:0000040,4.82e-31,59;CL:0000559,4.82e-31,59;CL:0000557,8.32e-30,67;CL:0002009,1.69e-29,61;CL:0000839,5.57e-29,66;CL:0000838,7.66e-22,52;CL:0000542,3.48e-21,53;CL:0000051,3.48e-21,53;CL:0000134,2.20e-16,354;CL:0002320,2.03e-15,361;CL:0000791,2.56e-14,18;CL:0000789,2.56e-14,18;CL:0002420,2.56e-14,18;CL:0002419,2.56e-14,18;CL:0000790,2.56e-14,18;CL:0000625,8.03e-14,11;CL:0000084,1.49e-12,25;CL:0000827,1.49e-12,25;CL:0000034,3.83e-12,441;CL:0000219,4.27e-12,386;CL:0000048,9.77e-12,427;CL:0000236,1.24e-11,14;CL:0000723,1.68e-11,433;CL:0000094,7.02e-11,8;CL:0002393,2.20e-08,9;CL:0002397,2.20e-08,9;CL:0000945,5.03e-08,24;CL:0000826,5.03e-08,24;CL:0000081,2.76e-07,11;CL:0000071,4.36e-07,18;CL:0002546,4.36e-07,18 | |||
|ontology_enrichment_development_v019=CL:0002057;7.50e-23;42!CL:0000790;3.25e-14;18!CL:0000051;1.66e-13;53!CL:0000049;2.53e-12;108!CL:0002546;3.80e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!5.49e-27!112;UBERON:0002390!2.51e-25!102;UBERON:0003061!2.51e-25!102;UBERON:0003081!3.87e-18!216;UBERON:0002371!1.90e-16!80;UBERON:0002405!1.90e-15!115;UBERON:0001474!1.13e-14!86;UBERON:0002384!1.68e-11!375;UBERON:0004765!8.85e-11!101;UBERON:0001434!8.85e-11!101;UBERON:0004535!8.80e-08!110;UBERON:0000178!1.17e-07!15;UBERON:0000179!1.17e-07!15;UBERON:0000463!1.17e-07!15;UBERON:0002204!1.52e-07!167;UBERON:0001009!5.24e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.61e-10;15!UBERON:0000179;5.61e-10;15!UBERON:0000463;5.61e-10;15!UBERON:0002390;1.95e-07;32!UBERON:0004638;3.80e-07;18!UBERON:0001986;3.80e-07;18!UBERON:0004852;3.80e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.96e-37,98;UBERON:0003061,2.96e-37,98;UBERON:0002193,1.15e-36,108;UBERON:0002405,7.21e-28,93;UBERON:0002371,8.36e-26,76;UBERON:0001474,1.11e-22,82;UBERON:0003081,3.98e-22,203;UBERON:0004765,3.33e-19,90;UBERON:0001434,1.06e-15,100;UBERON:0002384,4.06e-14,371;UBERON:0000178,5.49e-10,15;UBERON:0000179,5.49e-10,15;UBERON:0000463,5.49e-10,15;UBERON:0000926,1.58e-07,315;UBERON:0004120,1.58e-07,315;UBERON:0006603,1.58e-07,315;UBERON:0004638,4.36e-07,18;UBERON:0001986,4.36e-07,18;UBERON:0004852,4.36e-07,18 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0.631719873426831,0,0,0,0,0,0,0,0.672325146451775,0,1.46062018077475,0.487932798790507,0,0,0,0,0,0.125542639594803,0.687720651731561,0.57470412614962,0.472264687882075,5.50709987588466,2.68680578668049,3.40595471295367,0,0.30120591877825,0,1.62681121218633,0.710846162437108,4.9912074686924,1.10799081706375,3.20871115952227,2.82114131930607,1.11957737119962,0.32389366601898,1.03030227053675,2.61716829803216,3.02300754951048,2.18325655069035,2.09186133215116,2.05583944010913,1.23882548358041,3.45230870786581,1.5369642391746,3.07426898855161,1.72372840368309,2.5819387343353,2.70852973188684,1.69418105588344,1.63743690034707,2.69668181334102,1.22433556948361,1.92557416245656,2.55734850319616,1.9791078011203,1.59570926097305,2.55734850319616,2.32167390902867,1.13477044938228,1.24564449799115,3.01498398308092,3.12889751052121,3.25783267057675,3.02699751316684,1.47311054395026,0.316462387440884,2.32380814943136,3.18906449947565,2.72556239160889,1.01095768031846,1.35159203557356,1.28580469357664,1.14005097496499,1.79025009479181,1.64397738388171,5.27988733383968,5.46138611262132,4.44754626931777,3.41384178053206,5.60554381850417,4.59801951963587,3.30522436392431,4.77026877267682,3.98449078376614,4.11066032559657,1.91136614062614,5.28685314316103,1.68152568894461,2.10707267820062,0.590129310341499,1.57204305099666,1.02800749499755,2.50779743086017,1.62961133316795,1.89379122293893,3.89653456815823,3.89936599098108,3.82987679717288,3.32300841875432,5.1452734115353,2.17755243533648,3.38154303655683,2.30213066445147,3.59255023121603,3.18783394308558,1.03800594213442,1.07016331235885,4.18142095219907,2.49280553934646,1.14966148080576,1.71813722741315,2.78321661221453,5.41561204350964,7.1619179924206,5.70271226669025,4.21610333417764,5.50342427963999,3.74792179657038,2.60454977248419,7.39015197228942,4.03213486449465,3.20928234940209,1.88271725047639,0,0,0.12786256184353,0,0,0.144846518960824,0,0,0,0.221729397462564,0.175669571386252,0.327447688744282,0.364295288292542,0,0.97364218096405,1.91542711029194,2.79211717089617,1.90792499444274,0,0,1.39133685156694,0.860234595106124,2.42998351125316,0,1.67799774483962,4.40188867104108,2.08994966536811,2.06733407335463,2.49036383880697,0,3.22263453687318,2.28081631715554,1.70843440283719,2.20597848207521,1.62028389576352,1.07159673940896,1.79623498100936,0.900891843866578,0,0,2.01521918323448,11.8602375692457,3.87780264148325,0,0,0.633152558322899,0.264818361626438,0,0,0,0,0.74000264525148,0,0.67355336034844,0.817309515567294,0,0,0,0,0.570471821544449,0,0,0.161872944368132,0,0,0.368502951935304,0.103325781175765,0,0.247266929278557,0,0.718618141816238,0,0,0.277064115484183,0.438977620880838,0,0,0.453728732640084,0,0,0.211931901159562,0,0,0,0,0.168776332241266,0.779496041289589,0.252433774244115,0,0.161646056818812,0,1.5112814734146,1.01736355386293,0.773043412653187,0,0.573609190778008,0,0,0,0,0,0,0,0,1.38134921352481,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0.738155454624648,2.80483547606892,0.4115740113314,0,0,0,0,0,0,0.514703430895577,0.219500570817251,1.1240175325762,0.201057944823262,0,0.325808305310325,0,0,0,0.352226082707465,0.866198686566443,0.925971025153221,0.761016608938393,0,0,1.96973604869918,2.57404691653161,2.67536092119711,0,0.16798212819886,0.425325291727159,0,0,0,1.97065295158377,3.16974362447614,0.621984346622316,0.432359860250884,0.12624243342638,0,0.381988425558278,0,0,0.102827492703324,0,0,0,0.43596006883328,0.22001485746285,0.387815147273333,0,0.845302752556,0.797814349754612,2.08014873822732,0,0,0.266422179016099,0,0,0,0.325736184293735,0.355391948742546,0,0.301439377059586,0,0.299918973546171,1.2162378064119,1.50677127429638,0,0.479249710983165,0,0,0.579125226670317,0,0.716243852959582,0.672510863961164,3.34952292343276,4.09692392233083,3.46526197955321,0,0,0,0,0,8.98808428736619,5.9832291840805,3.72973962092432,0.12269149171914,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0.347534457872331,0.195801157462741,0.343143423810856,1.44737618286021,3.23571301227925,2.24127871387233,0,0,0,0.496215615637554,0.153461973288062,0,0,1.53512174720011,0.321707842287215,0,0.462629081407967,0.177561725313127,0.492762936082855,0,1.16210378459959,0,0.200506470303285,0.0920809889358963,0.114814448164607,0.546273504020151,0.262248829918848,0,0.15403067420883,0,0,0,1.13733384070897,1.87103075804167,0.215915916102139,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0.154048617114644,0,0.137836572484531,0.107420244868274,0,0.170453254832202,0,0,0,0,0.10115778085555,1.85938219718914,0,0.6970372701606,0.924100740528266,1.06461206063404,0,0.74129687641568,0.715624433709956,0.372158369359667,0,0.38126038784765,0.767693373934002,0,0,0.78494864019923,0,0,0,1.2130948894399,0,1.68503382495592,0.48763373908959,0.974853958525138,1.05650146756755,0,0,0,0,0.66343897524122,1.31535265576129,0,0,0.608731130888112,0.6196469961995,0.281695602532241,0.143411352204052,0,0.7133421029625,0.354761064070598,0,0,0,0,0.0962221127255121,0.670302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| ||
|short_description=p14@PPP1R18 | |||
}} | }} |
Latest revision as of 17:35, 17 September 2015
Short description: | p14@PPP1R18 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_PPP1R18_5end |
Coexpression cluster: | C4589_Neutrophils_Eosinophils_acute_CD8_Whole_thymus_CD4 |
Association with transcript: | 6bp_to_BC023314_5end |
EntrezGene: | PPP1R18 |
HGNC: | 29413 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.96e-37 | 98 |
blood island | 2.96e-37 | 98 |
hemolymphoid system | 1.15e-36 | 108 |
immune system | 7.21e-28 | 93 |
bone marrow | 8.36e-26 | 76 |
bone element | 1.11e-22 | 82 |
lateral plate mesoderm | 3.98e-22 | 203 |
skeletal element | 3.33e-19 | 90 |
skeletal system | 1.06e-15 | 100 |
connective tissue | 4.06e-14 | 371 |
blood | 5.49e-10 | 15 |
haemolymphatic fluid | 5.49e-10 | 15 |
organism substance | 5.49e-10 | 15 |
mesoderm | 1.58e-07 | 315 |
mesoderm-derived structure | 1.58e-07 | 315 |
presumptive mesoderm | 1.58e-07 | 315 |
blood vessel endothelium | 4.36e-07 | 18 |
endothelium | 4.36e-07 | 18 |
cardiovascular system endothelium | 4.36e-07 | 18 |