FFCP PHASE1:Hg19::chr7:73624251..73624266,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr7:73624251..73624266,+ to FFCP PHASE1:Hg19::chr7:73624251..73624266,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7462 | |EntrezGene=7462 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12749 | |HGNC=12749 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000491595_5end | |||
|cluster_id=chr7:73624251..73624266,+ | |||
|coexpression_cluster_id=C4697 | |||
|description=CAGE_peak_3_at_LAT2_5end | |||
|id=chr7:73624251..73624266,+ | |||
|ontology_enrichment_celltype=CL:0000037!8.13e-64!172;CL:0000566!8.13e-64!172;CL:0002032!6.20e-62!165;CL:0000837!6.20e-62!165;CL:0000988!5.12e-58!182;CL:0000738!1.25e-51!140;CL:0000763!8.25e-50!112;CL:0000049!8.25e-50!112;CL:0002087!1.95e-45!119;CL:0002031!5.30e-45!124;CL:0000766!1.43e-41!76;CL:0000557!1.90e-38!71;CL:0000839!3.84e-36!70;CL:0002194!3.20e-34!63;CL:0000576!3.20e-34!63;CL:0000040!3.20e-34!63;CL:0000559!3.20e-34!63;CL:0002009!8.80e-34!65;CL:0002057!7.58e-30!42;CL:0000860!1.45e-26!45;CL:0000945!1.26e-13!24;CL:0000826!1.26e-13!24;CL:0000542!5.44e-11!53;CL:0000051!5.44e-11!53;CL:0000838!2.14e-10!52;CL:0000134!1.34e-08!358;CL:0002320!3.00e-08!365;CL:0002393!4.95e-08!9;CL:0002397!4.95e-08!9;CL:0000236!3.53e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000473;1.62e-31;39!CL:0000234;1.62e-31;39!CL:0000576;2.67e-31;48!CL:0000860;9.64e-31;33!CL:0002057;9.64e-31;33!CL:0000766;1.72e-29;69!CL:0000763;7.32e-23;100!CL:0000945;1.73e-17;24!CL:0002087;2.36e-16;104!CL:0000738;3.10e-15;136!CL:0000988;6.51e-13;177!CL:0000235;1.79e-08;6!CL:0000236;7.58e-08;13!CL:0002393;8.32e-08;6!CL:0002397;8.32e-08;6!CL:0000097;7.31e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,7.57e-81,168;CL:0002032,8.81e-79,161;CL:0000837,8.81e-79,161;CL:0000988,7.18e-75,177;CL:0000763,2.78e-72,108;CL:0000049,2.78e-72,108;CL:0000738,1.90e-65,136;CL:0000766,3.32e-65,72;CL:0000557,1.68e-60,67;CL:0002031,1.65e-58,120;CL:0002087,2.91e-58,115;CL:0000839,3.30e-57,66;CL:0002194,7.29e-54,59;CL:0000576,7.29e-54,59;CL:0000040,7.29e-54,59;CL:0000559,7.29e-54,59;CL:0002009,2.23e-53,61;CL:0000473,3.38e-51,48;CL:0000234,3.38e-51,48;CL:0000860,6.97e-44,42;CL:0002057,6.97e-44,42;CL:0000134,1.64e-20,354;CL:0002320,1.80e-19,361;CL:0000945,1.74e-17,24;CL:0000826,1.74e-17,24;CL:0000219,7.58e-16,386;CL:0000034,8.82e-12,441;CL:0000048,1.50e-11,427;CL:0002393,3.17e-11,9;CL:0002397,3.17e-11,9;CL:0000723,5.64e-11,433;CL:0000236,4.52e-09,14;CL:0000542,5.22e-09,53;CL:0000051,5.22e-09,53;CL:0000235,1.45e-08,6;CL:0000838,2.58e-08,52;CL:0000097,5.72e-07,5;CL:0002028,5.72e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002057;1.91e-31;42!CL:0000049;1.43e-19;108 | |||
|ontology_enrichment_disease=DOID:2531!1.72e-13!51;DOID:0060083!1.72e-13!51;DOID:8692!3.30e-12!31;DOID:1240!6.34e-12!39 | |||
|ontology_enrichment_disease_v019=DOID:8692;4.96e-14;31!DOID:1240;5.77e-12;39!DOID:2531;9.78e-10;51!DOID:0060083;9.78e-10;51 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,6.90e-16,51;DOID:0060083,6.90e-16,51;DOID:8692,8.60e-15,31;DOID:1240,2.13e-14,39 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.23e-41!102;UBERON:0003061!1.23e-41!102;UBERON:0002193!5.46e-37!112;UBERON:0002371!2.36e-34!80;UBERON:0001474!1.02e-30!86;UBERON:0004765!1.46e-25!101;UBERON:0001434!1.46e-25!101;UBERON:0002405!5.01e-23!115;UBERON:0007023!3.17e-17!115;UBERON:0002204!1.81e-08!167;UBERON:0003081!5.23e-08!216;UBERON:0002384!2.31e-07!375;UBERON:0001049!2.37e-07!57;UBERON:0005068!2.37e-07!57;UBERON:0006241!2.37e-07!57;UBERON:0007135!2.37e-07!57;UBERON:0002020!3.94e-07!34;UBERON:0003528!3.94e-07!34;UBERON:0001893!4.56e-07!34;UBERON:0002780!6.00e-07!41;UBERON:0001890!6.00e-07!41;UBERON:0006240!6.00e-07!41;UBERON:0002791!7.72e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.42e-07;15!UBERON:0000179;2.42e-07;15!UBERON:0000463;2.42e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,8.70e-61,98;UBERON:0003061,8.70e-61,98;UBERON:0002193,1.01e-55,108;UBERON:0002371,4.45e-53,76;UBERON:0002405,9.96e-49,93;UBERON:0001474,1.33e-47,82;UBERON:0004765,1.88e-41,90;UBERON:0001434,3.53e-35,100;UBERON:0002384,4.66e-18,371;UBERON:0003081,2.74e-17,203;UBERON:0002204,8.25e-14,167;UBERON:0000178,2.57e-07,15;UBERON:0000179,2.57e-07,15;UBERON:0000463,2.57e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0.672325146451775,0,0.730310090387373,0,0,0,0,0,0,0,10.0865695587296,7.79955599774485,9.76013688289623,5.50709987588466,1.53531759238885,3.40595471295367,0,0,0,3.02122082263176,3.12772311472327,11.7440175733939,3.32397245119126,3.00816671205213,3.25516306073778,2.91090116511902,2.26725566213286,2.83333124397605,4.9435401185052,5.66813915533214,5.09426528494414,3.0215774797739,5.34518254428373,2.78735733805593,3.74000110018796,5.12321413058201,5.67557351732605,1.72372840368309,3.22742341791913,9.47985406160392,4.1413314699373,4.63940455098338,4.04502272001152,3.67300670845083,5.1348644332175,8.95071976118658,3.95821560224059,3.19141852194611,5.54092175692502,3.48251086354301,3.97169657283798,1.86846674698672,2.51248665256743,3.12889751052121,3.25783267057675,1.81619850790011,6.99727508376373,5.06339819905415,9.29523259772544,6.37812899895131,7.96702852931828,8.87396186057311,5.85689882081875,7.23265140136861,9.69043328720245,7.35991705636633,7.85455861187926,0,5.46138611262132,4.44754626931777,4.26730222566507,4.00395987036012,4.02326707968138,2.64417949113945,1.90810750907073,1.70763890732835,0,4.58727873750275,9.25199300053181,2.80254281490768,10.271979306228,0,0,0.616804496998528,0.83593247695339,0,0,0,2.56244050835899,0,0.221533894583621,0,1.28091319725675,1.04047478047903,3.94650971048823,2.76350017785848,2.31842468588042,0,0,0,1.69964014046349,0,0,0,0.637130828648193,0.651083453856419,0.950452044448374,1.05402583354441,0.255973222308837,0,0.473554504088034,0,0.403213486449465,0,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.72038491523742,0,0,1.9472843619281,0.870648686496336,2.52620124985844,0.476981248610684,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.90920814609754,3.97807250736704,5.49935300468294,0,0.16798212819886,0,0,0,0,1.97065295158377,4.22632483263485,10.3664057770386,8.79131715843465,9.84690980725764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0.823240336780769,0,0,0,0,0,0,13.378615870531,12.054170194371,6.32501818449095,0,0,0,0,0,0,2.69004345584465,2.36436912242313,0.646882724578552,2.05348858047597,0,0,0,0.335032530668698,0,3.74503511973591,8.97484377612075,2.90090859405225,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,2.68798433959754,2.80428461064202,2.24127871387233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0.309123034943167,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.847294206991012,0,0,0,0,2.02979043692868,0.764637207142375,4.5571774973933,3.09701308095126,4.52498500394814,2.59389324477087,2.16012574895246,3.96562588147135,0,0,0,9.29015875628594,12.8399599549036,0,0,13.9705560002972,31.9813968121052,9.73698480529861,0,21.0597883585094,30.811681669481,9.55747364215442,0,10.1575066680962,18.9493928622365,18.1619736471943,19.1630806960647,9.61814965316141,6.75929681478608,8.4996920999118,11.5125907781217,17.7803166815857,0,0,11.3591384959913,9.65908707193678,2.81974010175699,0,0.586032717087576,0,0.891547074219827,0.284136146806413,0,0,0,1.9882952955326,2.2507106625682,0,1.15362711958732,0,0.796991953004279,3.59169090190492,0,0.20453736500431,9.60061482596342,0,0.0898683511473268,0,11.2545921449912,0.0986434056369336,4.7896618469388,0,1.93866549219044,1.29875337426592,0,0,0,0,0,0,0,0,0,0,0,0.60298219312704,0,0.331737779793674,0,0.438770794307945,0,0,0.230850775511391,0,0,0,0,0,0,0,0,4.70940769185074,0.332423363800313,0,0,0.167821586975843,0,0.635746315921515,0,0.326465616318295,0,0,0.995261931078505,1.14994833854341,0.611030144933625,0,0,0,2.02203398942031,0,0.468528891450678,0.91227394607833,0.19566461893209,0,0,1.20990716048664,0.91821828489147,1.39010475182674,0.150323419414493,0.207376382794494,0.664653872707185,0.330991955875499,0,0,0.284609546029793,3.46686682532847,0,0,0,0.34945333648406,1.54787429224455,0,0,0,0.387956065953678,0,0.451961481561065,0,0,0.886351143382302,0,0,1.49417096317547,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0.600420288709789,3.69644523008381,10.2197270453578,0,0,0.837847203816763,0,0,0,0,0,0.201550417460179,0,0,0,0,0,0,10.9228598364862,0,1.63444087333891,0,0,0,1.799791132412,0,0.546746009922222,0,0.236417121897595,0.0524545881349981,0.316801009558219,0.35857467866569,0,0.714695326373367,0,0,0,0,0,0,0.82092520749339,0,0,0.732761168390412,0,0.646414781807753,2.38018683136842,0.171086837884329,0,0.961086713109252,0.471612915298998,1.24271716604159,1.9846640872478,2.17372795087739,2.80122976276061,0,0,0.2506898940227,0,0,0,1.77213635993397,0.366078794705889,1.3771002377715,0.573409195690071,3.43880059764242,1.73869928235874,0,0,0,0,0.23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|short_description=p3@LAT2 | |||
}} | }} |
Latest revision as of 11:23, 19 September 2015
Short description: | p3@LAT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LAT2_5end |
Coexpression cluster: | C4697_Eosinophils_Mast_acute_non_CD14_Neutrophils_myelodysplastic |
Association with transcript: | 0bp_to_ENST00000491595_5end |
EntrezGene: | LAT2 |
HGNC: | 12749 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 8.70e-61 | 98 |
blood island | 8.70e-61 | 98 |
hemolymphoid system | 1.01e-55 | 108 |
bone marrow | 4.45e-53 | 76 |
immune system | 9.96e-49 | 93 |
bone element | 1.33e-47 | 82 |
skeletal element | 1.88e-41 | 90 |
skeletal system | 3.53e-35 | 100 |
connective tissue | 4.66e-18 | 371 |
lateral plate mesoderm | 2.74e-17 | 203 |
musculoskeletal system | 8.25e-14 | 167 |
blood | 2.57e-07 | 15 |
haemolymphatic fluid | 2.57e-07 | 15 |
organism substance | 2.57e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 6.90e-16 | 51 |
immune system cancer | 6.90e-16 | 51 |
myeloid leukemia | 8.60e-15 | 31 |
leukemia | 2.13e-14 | 39 |