FFCP PHASE1:Hg19::chr8:134087154..134087187,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr8:134087154..134087187,- to FFCP PHASE1:Hg19::chr8:134087154..134087187,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6503 | |EntrezGene=6503 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10902 | |HGNC=10902 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=10bp_to_ENST00000522002_5end | |||
|cluster_id=chr8:134087154..134087187,- | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_4_at_SLA_5end | |||
|id=chr8:134087154..134087187,- | |||
|ontology_enrichment_celltype=CL:0000037!4.56e-59!172;CL:0000566!4.56e-59!172;CL:0002032!2.38e-55!165;CL:0000837!2.38e-55!165;CL:0000988!6.74e-53!182;CL:0000738!3.62e-49!140;CL:0000763!2.10e-46!112;CL:0000049!2.10e-46!112;CL:0002087!1.15e-41!119;CL:0002031!2.74e-41!124;CL:0000766!2.16e-38!76;CL:0002009!1.84e-34!65;CL:0000557!1.13e-33!71;CL:0002194!5.76e-33!63;CL:0000576!5.76e-33!63;CL:0000040!5.76e-33!63;CL:0000559!5.76e-33!63;CL:0000839!4.90e-32!70;CL:0002057!1.18e-27!42;CL:0000860!1.29e-24!45;CL:0000084!1.34e-14!25;CL:0000827!1.34e-14!25;CL:0000791!2.04e-12!18;CL:0000789!2.04e-12!18;CL:0002420!2.04e-12!18;CL:0002419!2.04e-12!18;CL:0000790!2.04e-12!18;CL:0000838!3.05e-09!52;CL:0000625!5.38e-09!11;CL:0000542!7.30e-09!53;CL:0000051!7.30e-09!53;CL:0002393!1.08e-08!9;CL:0002397!1.08e-08!9;CL:0000094!4.85e-08!8;CL:0000134!1.88e-07!358 | |||
|ontology_enrichment_celltype_v019=CL:0000576;2.29e-24;48!CL:0000473;2.00e-23;39!CL:0000234;2.00e-23;39!CL:0000860;6.59e-22;33!CL:0002057;6.59e-22;33!CL:0000766;1.45e-20;69!CL:0000763;2.28e-16;100!CL:0000084;3.95e-16;25!CL:0000791;3.05e-15;18!CL:0000789;3.05e-15;18!CL:0002419;3.05e-15;18!CL:0002087;2.69e-13;104!CL:0000738;6.70e-12;136!CL:0000625;5.67e-11;11!CL:0000988;1.77e-10;177!CL:0000094;6.44e-10;8!CL:0002393;2.19e-07;6!CL:0002397;2.19e-07;6!CL:0000235;3.02e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,7.64e-64,168;CL:0002032,3.90e-60,161;CL:0000837,3.90e-60,161;CL:0000988,1.39e-58,177;CL:0000738,7.77e-56,136;CL:0000763,1.33e-52,108;CL:0000049,1.33e-52,108;CL:0002087,1.90e-50,115;CL:0000766,1.99e-49,72;CL:0002031,1.50e-46,120;CL:0002009,1.81e-46,61;CL:0002194,1.62e-44,59;CL:0000576,1.62e-44,59;CL:0000040,1.62e-44,59;CL:0000559,1.62e-44,59;CL:0000557,2.73e-43,67;CL:0000473,1.22e-39,48;CL:0000234,1.22e-39,48;CL:0000839,4.65e-39,66;CL:0000860,1.10e-33,42;CL:0002057,1.10e-33,42;CL:0000084,4.05e-16,25;CL:0000827,4.05e-16,25;CL:0000791,1.82e-15,18;CL:0000789,1.82e-15,18;CL:0002420,1.82e-15,18;CL:0002419,1.82e-15,18;CL:0000790,1.82e-15,18;CL:0000134,2.80e-12,354;CL:0002320,1.91e-11,361;CL:0000625,4.37e-11,11;CL:0002393,1.07e-10,9;CL:0002397,1.07e-10,9;CL:0000094,7.27e-10,8;CL:0000838,8.35e-09,52;CL:0000219,1.30e-08,386;CL:0000542,1.73e-08,53;CL:0000051,1.73e-08,53;CL:0000235,2.53e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002057;6.86e-24;42!CL:0000790;3.05e-15;18!CL:0000049;9.39e-15;108 | |||
|ontology_enrichment_disease=DOID:1240!1.69e-09!39;DOID:2531!5.44e-09!51;DOID:0060083!5.44e-09!51;DOID:8692!2.23e-08!31 | |||
|ontology_enrichment_disease_v019=DOID:8692;4.82e-08;31!DOID:1240;3.61e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,9.18e-09,39;DOID:8692,2.63e-08,31;DOID:2531,5.91e-08,51;DOID:0060083,5.91e-08,51 | |||
|ontology_enrichment_uberon=UBERON:0002390!2.01e-41!102;UBERON:0003061!2.01e-41!102;UBERON:0002193!2.68e-37!112;UBERON:0002371!7.73e-30!80;UBERON:0007023!3.01e-29!115;UBERON:0001474!5.93e-26!86;UBERON:0002405!1.73e-23!115;UBERON:0004765!3.44e-19!101;UBERON:0001434!3.44e-19!101;UBERON:0003081!3.85e-09!216;UBERON:0000178!1.11e-08!15;UBERON:0000179!1.11e-08!15;UBERON:0000463!1.11e-08!15;UBERON:0001049!3.93e-08!57;UBERON:0005068!3.93e-08!57;UBERON:0006241!3.93e-08!57;UBERON:0007135!3.93e-08!57;UBERON:0002780!4.88e-07!41;UBERON:0001890!4.88e-07!41;UBERON:0006240!4.88e-07!41 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.85e-11;15!UBERON:0000179;3.85e-11;15!UBERON:0000463;3.85e-11;15!UBERON:0002390;4.40e-09;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,8.70e-55,98;UBERON:0003061,8.70e-55,98;UBERON:0002193,2.49e-50,108;UBERON:0002405,1.13e-39,93;UBERON:0002371,3.83e-39,76;UBERON:0001474,1.07e-34,82;UBERON:0004765,9.99e-30,90;UBERON:0001434,1.10e-24,100;UBERON:0003081,1.09e-15,203;UBERON:0000178,3.32e-11,15;UBERON:0000179,3.32e-11,15;UBERON:0000463,3.32e-11,15;UBERON:0002384,9.89e-11,371;UBERON:0007023,1.23e-09,114;UBERON:0002204,1.74e-08,167 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.14691421479123,4.98978217526377,2.16742572642506,0,0,0,0,0,5.5784083473621,6.64794490238253,8.82395568868623,4.34021741431704,16.7936605679943,14.5752149708541,22.15149881654,5.08893835728477,3.77875943688809,6.0646015296954,3.71886459049095,4.52284676824008,2.78735733805593,3.45230870786581,3.84241059793651,4.02019790810595,5.5159308917859,2.5819387343353,5.41705946377367,3.57660445130949,1.91034305040492,2.24723484445085,2.75475503133812,1.92557416245656,3.19668562899521,1.9791078011203,1.99463657621632,3.83602275479425,3.19230162491442,0.56738522469114,1.24564449799115,4.52247597462138,2.60741459210101,3.04064382587163,4.84319602106695,2.94622108790052,2.84816148696796,10.1402537429732,5.31510749912609,4.19317291016752,8.53697596713363,8.10955221344134,6.75047464127737,13.3955989558387,14.7198341127327,8.40255107317316,0,2.18455444504853,0,2.13365111283254,0.400395987036012,0,0,0,0,0.587237189370939,0,0,3.36305137788922,2.89722493252585,1.96709770113833,2.35806457649499,1.64481199199607,2.50779743086017,2.60737813306872,2.36723902867367,0,4.45641827540694,4.12448270464772,5.53834736459053,4.33286182024025,2.5618263945135,4.03183977435623,0.822189523018381,1.93445012450094,1.73881851441031,4.30031033169975,2.94294910898684,5.22677619024884,4.41906436520508,3.44898444241729,3.09264700934367,3.03623630423403,2.86708872891687,3.25541726928209,2.85135613334512,9.18508226374414,9.08704939196371,8.74515085866421,4.2619905367923,2.46338399076314,6.24980903996671,5.88368430723716,4.63438092424957,0,0,0,0,0,0,0,0,0,0,0.175669571386252,0.785874452986276,0,0,9.08732702233113,6.96518949197069,9.97184703891489,0.715471872916026,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,56.6655794975072,73.6782501881818,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0.982827216677626,1.18157981336281,3.97316789473185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.8335482678455,1.8720341211139,8.9178697373237,0,0,0,0,0,0,0,0.352193736052904,0,1.44119953416961,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.29742683847143,9.04062764577828,6.32501818449095,0,0,0,0,0,0,2.69004345584465,3.94061520403854,6.03757209606648,4.2353201972317,0,0,0,0.670065061337395,0,56.1755267960387,44.8742188806037,78.3245320394107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.03011288817817,8.84428223356329,4.90946765895844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0.261435451024901,0,0,0,2.47298427954533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,1.50630081242847,0,0,0,0,36.028780255484,38.9964975642611,37.5967143534947,37.4023887468729,47.3066614049123,40.2053452939485,26.4615404246676,26.9662559940052,0,0,0,0,0,0.284567373393656,2.23196781820351,12.1743416574018,2.48956981172077,6.77355464716425,1.62310970137278,5.33514638415572,6.16233633389619,4.7003968731907,2.50634477090067,9.98821489029459,3.05117342697029,12.3097821386539,12.3495408930195,12.3661924112075,1.53620382154229,1.56573275524691,1.50164227540718,17.7803166815857,0,0,0.811367035427949,0.33307196799782,0,0,2.19762268907841,0,1.22587722705226,0,0,0,0,0.994147647766298,2.11004124615769,0,1.15362711958732,0,1.39473591775749,2.21027132424918,0,0,0,0,0,0,4.09257896181497,0.197286811273867,4.7896618469388,0,3.87733098438087,0.834912883456661,1.99613798001194,0,0,0,0,0,0,0,0,0,0.885741385813839,1.68835014075571,0,0.442317039724898,0,0.658156191461918,0,0,0.615602068030377,0,0,0,0,0.31900115973192,0,0,7.15353087370155,6.43619051219602,0.332423363800313,0,0,0,0,0.158936578980379,0,0,0.141353071433941,0,0,0.973033209536731,0,0,0,0,2.22423738836234,0,0.702793337176017,0,0,0,0.394584402849391,0,0.91821828489147,3.79119477770928,0,0,0,0,0,0,0,0,0,0,0,1.57254001417827,0,0,0,0,0.872901148395775,0,0.451961481561065,0,0,0.633107959558787,0,0,1.49417096317547,0,0,0,0,0,0,0,0,0,0,0,1.20084057741958,3.28572909340783,1.27746588066972,0,0.262887354279314,0.558564802544508,0.916641696046735,0,0.199679000498991,0.429226048136571,1.56220020209311,0.806201669840715,0,0,0,0,0,0,0.254019996197353,0,3.26888174667781,0,0,0,4.94942561413301,5.41661368190565,0.789744236554321,0,0.788057072991982,0.367182116944987,0,0,0,0.714695326373367,1.32418394073086,0,0,0,0,0,0,0,0,0.58620893471233,0,1.16354660725395,1.85125642439766,0,0,2.13574825135389,1.72924735609633,4.55662960881915,12.9003165671107,1.58089305518355,0.60896299190448,0,0,0,0,0,0,0,0.122026264901963,2.253436752717,1.72022758707021,2.5513681853476,1.92498849118289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24432592536558,0.194860308839388,0.265729680626726,0,0,0,0,1.39991177098451,28.806767017418,7.06081416609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| ||
|short_description=p4@SLA | |||
}} | }} |
Latest revision as of 15:13, 16 September 2015
Short description: | p4@SLA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SLA_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 10bp_to_ENST00000522002_5end |
EntrezGene: | SLA |
HGNC: | 10902 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 8.70e-55 | 98 |
blood island | 8.70e-55 | 98 |
hemolymphoid system | 2.49e-50 | 108 |
immune system | 1.13e-39 | 93 |
bone marrow | 3.83e-39 | 76 |
bone element | 1.07e-34 | 82 |
skeletal element | 9.99e-30 | 90 |
skeletal system | 1.10e-24 | 100 |
lateral plate mesoderm | 1.09e-15 | 203 |
blood | 3.32e-11 | 15 |
haemolymphatic fluid | 3.32e-11 | 15 |
organism substance | 3.32e-11 | 15 |
connective tissue | 9.89e-11 | 371 |
adult organism | 1.23e-09 | 114 |
musculoskeletal system | 1.74e-08 | 167 |
Ontology term | p-value | n |
---|---|---|
leukemia | 9.18e-09 | 39 |
myeloid leukemia | 2.63e-08 | 31 |
hematologic cancer | 5.91e-08 | 51 |
immune system cancer | 5.91e-08 | 51 |