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FFCP PHASE1:Mm9::chr2:170557427..170557451,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr2:170557427..170557451,+
|DHSsupport=NA
|short_description=p3@Dok5
|DPIdataset=NA
|description=CAGE_peak_3_at_Dok5_5end
|association_with_transcript=120bp_to_ENSMUST00000029075,NM_001163686,NM_029761,uc008ocg.2,uc012ckm.1_5end
|EntrezGene=76829
|EntrezGene=76829
|HGNC=
|HGNC=
|MCL_coexpression_id=950
|TSSclassifier=NA
|UniProt=Q91ZM9,B1AVY6,Q6NXY7
|UniProt=Q91ZM9,B1AVY6,Q6NXY7
|association_with_transcript=120bp_to_ENSMUST00000029075,NM_001163686,NM_029761,uc008ocg.2,uc012ckm.1_5end
|cluster_id=chr2:170557427..170557451,+
|description=CAGE_peak_3_at_Dok5_5end
|id=chr2:170557427..170557451,+
|ontology_enrichment_celltype=CL:0000540!6.24e-16!33;CL:0000047!6.24e-16!33;CL:0000031!6.24e-16!33;CL:0000404!6.24e-16!33;CL:0000221!1.78e-15!44;CL:0000133!1.78e-15!44;CL:0002319!1.91e-15!43;CL:0000117!7.17e-15!23;CL:0000337!7.17e-15!23;CL:0000393!3.93e-12!39;CL:0000211!3.93e-12!39;CL:0000055!1.13e-11!50
|ontology_enrichment_celltype_v019_2=CL:0000117,2.15e-20,23;CL:0000337,2.15e-20,23;CL:0000540,2.29e-17,33;CL:0000047,2.29e-17,33;CL:0000031,2.29e-17,33;CL:0000404,2.29e-17,33;CL:0002319,3.90e-17,43;CL:0000221,1.82e-16,44;CL:0000133,1.82e-16,44;CL:0000393,4.29e-13,39;CL:0000211,4.29e-13,39;CL:0002609,2.34e-07,6
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!7.90e-29!75;UBERON:0001016!7.90e-29!75;UBERON:0001017!2.56e-27!73;UBERON:0005743!2.56e-27!73;UBERON:0004121!1.07e-23!102;UBERON:0000924!1.07e-23!102;UBERON:0006601!1.07e-23!102;UBERON:0001049!8.60e-21!52;UBERON:0005068!8.60e-21!52;UBERON:0006241!8.60e-21!52;UBERON:0007135!8.60e-21!52;UBERON:0002346!3.77e-20!71;UBERON:0003075!3.77e-20!71;UBERON:0007284!3.77e-20!71;UBERON:0002020!2.50e-19!34;UBERON:0000033!5.89e-19!63;UBERON:0000955!7.68e-19!50;UBERON:0006238!7.68e-19!50;UBERON:0002616!1.55e-18!49;UBERON:0003080!5.73e-16!40;UBERON:0002791!6.43e-16!29;UBERON:0003528!6.43e-16!29;UBERON:0001893!6.43e-16!29;UBERON:0003056!6.55e-16!49;UBERON:0002780!2.00e-15!39;UBERON:0001890!2.00e-15!39;UBERON:0006240!2.00e-15!39;UBERON:0000956!4.14e-12!21;UBERON:0001869!4.14e-12!21;UBERON:0000203!4.14e-12!21;UBERON:0007811!7.84e-10!86;UBERON:0000153!7.86e-10!94;UBERON:0002619!2.31e-09!17;UBERON:0002021!5.04e-08!10;UBERON:0000411!5.04e-08!10;UBERON:0001950!5.04e-08!10
|ontology_enrichment_uberon_v019_2=UBERON:0001016,3.36e-31,75;UBERON:0001017,3.06e-29,73;UBERON:0002020,2.25e-26,34;UBERON:0000073,4.86e-26,54;UBERON:0001049,1.91e-24,52;UBERON:0005068,1.91e-24,52;UBERON:0006241,1.91e-24,52;UBERON:0007135,1.91e-24,52;UBERON:0004121,8.60e-22,95;UBERON:0000924,8.60e-22,95;UBERON:0006601,8.60e-22,95;UBERON:0003528,1.50e-21,29;UBERON:0002791,1.50e-21,29;UBERON:0001893,1.50e-21,29;UBERON:0000955,1.49e-19,47;UBERON:0006238,1.49e-19,47;UBERON:0002616,3.92e-19,46;UBERON:0002346,7.31e-19,64;UBERON:0003075,7.31e-19,64;UBERON:0007284,7.31e-19,64;UBERON:0003080,2.05e-17,40;UBERON:0002780,1.09e-16,39;UBERON:0001890,1.09e-16,39;UBERON:0006240,1.09e-16,39;UBERON:0010371,2.87e-16,73;UBERON:0000956,3.73e-16,21;UBERON:0001869,3.73e-16,21;UBERON:0000203,3.73e-16,21;UBERON:0002619,2.76e-12,17;UBERON:0003056,4.20e-12,49;UBERON:0010314,1.02e-11,92;UBERON:0002021,1.04e-10,10;UBERON:0000411,1.04e-10,10;UBERON:0001950,1.04e-10,10;UBERON:0003076,1.14e-07,12;UBERON:0003057,1.14e-07,12;UBERON:0002240,9.38e-07,6;UBERON:0005174,9.38e-07,6;UBERON:0001137,9.38e-07,6
|phase1_expression=2.40223270657191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10556277196391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09012578190223,0.439372365468944,0,0.419959264876088,0,0,0,0,0.771778308107841,0.286533439938757,0,4.65327859977075,3.70293685490423,5.07065122804943,2.03306719241479,0.889294796111139,0.899899717281399,0,2.1314403448383,2.69640099466564,6.91592949578798,12.2353742524004,10.6654691282036,11.1472229516232,5.71301968807607,4.19650227808066,4.77714116938321,4.02550978276593,12.8690630125403,4.40463523997555,3.57524546638526,3.07213066512487,3.29715719325485,4.57438218012048,4.16730696445408,3.62937898701795,1.12552522006336,2.44477196442896,4.71405736757868,5.41012387036591,5.40558392893372,7.19398836665249,4.45872204630035,0.289864488701678,0,0,0,0,0,0.561777680527007,0,0,0,0.704217098883403,0,0,0,0,0,0,0,0,0,2.77576522825817,0,0.691846491768175,0.452167921657868,0.352766121407114,0.125666591329675,0,0.289198713839823,0,1.94120219936891,0.883366073841574,0.484875253135222,0,1.75668478206928,1.46612694769419,0,0,0,0,3.44518470631092,2.28750301409313,4.27224797183739,3.82413504423008,3.83573185995496,2.0778804455956,3.0825839982874,0.101839363850316,0.870848794270651,1.0108910337347,0.420883711772948,0.260240885925407,0.459804208866946,0.900310649026746,0.90422890701429,0.95251098811859,0.512454881139399,0.937017245597288,0.517406741478031,0.215567992932842,0,0.703804496655795,1.31517439456545,1.11218899690239,1.74126083261083,0.411564272815887,0,0,0,0,0.621377317606506,0.703578179943289,1.2604344302271,1.18372367792605,0.787056926989615,0.462801338662135,0,0.268273401399619,0.467061369468678,0.329119699826961,0.164167464079095,0.405344047729279,0.877199924551994,0.439100230582101,0,1.89260953707715,4.83651678182637,0,0,0.426576501070468,0.232236671860439,0.128867461322093,0.201683524623343,0,0.190225626112559,0,0.164698954724011,0.251335208800269,0,0,0,0,0,0.379335801906163,0.685491075658373,0,0.203651327845314,0,0,0.0632365371242573,0,0,0,0,0,0.393117990226406,0,0,0.482354319504834,0.25462585178142,0,0,0.274561413188081,1.43768206527355,0,0.312037673114561,0,0,0,0,0.189491411770485,0.977789858652155,0.339490171550376,0.234690248288502,0.167506257441816,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,2.72936002979246,3.16471553798949,0,1.26235463602186,1.57754109708128,0.780877488593277,1.93881057959519,0.955875191810208,0.668396022247182,0.849229592366497,1.61924280669958,1.75353514746787,0.395287777946524,1.60660658210904,0,0.712262414669021,0.488660878060728,0,0,0.485561272309963,0.302323556964751,0,0,0,0,0.363533729477506,0,0,0,0,0,0.540183282093931,0.517434735131018,1.07168517515796,0.532020700926821,0.891844088010353,0.822745103010605,0.304464949114599,0.23467170806371,0.42366414172764,0,0,0,1.08563264870681,0.119372344003136,0.164140899745061,0,3.70850604021019,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0.432021363287205,0,0.218362563746178,0,0.165306911450672,0,0,0,0,0.747582730219894,0.66183396182839,0.583353565032143,1.16243841129958,1.18269287843545,1.05621514781179,0.2604087696879,0,0,0.288030006257865,0,0.405450430580328,0.513554785824136,0.25984164595559,0.179026695667481,0.198681354781265,0.120195449519969,0,0.100966449948148,0.15241361331,0,0.0974578807397524,0,0,1.36038230169127,0,0.0897138566094757,0,0,0,0,0.214368379079066,0,9.03602948187307,5.52390283808612,8.59343270159095,12.0297227640581,5.48066015816514,5.2877572817279,6.75022500231806,4.05289082901798,3.17199686288943,5.1776031175182,1.03787347584177,1.19707462020309,1.70733605754134,1.21553358534147,1.46729213839588,0.919217542250071,1.33348036680969,2.47242068686673,1.28367683836726,1.76888048234658,2.02783439912192,1.88626341386076,1.87283014939765,2.81710670581425,3.0440798546475,3.33405583898152,3.01299247456624,2.50781986602817,3.29668720642645,2.06078488188156,1.37147700954166,1.59728225543404,3.33810665926249,1.74415699958794,1.78807822789128,1.94613598150856,1.09756783723664,1.05227884575137,2.58027816307137,1.68342681497322,2.25406534435931,2.75812550651578,1.63692417267876,2.16911577660352,1.15743966588685,3.74715866906919,2.33931608445408,0.859484216193193,0.191288332068843,0.441182838239031,2.55054619182464
|phase1_expression=2.40223270657191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10556277196391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09012578190223,0.439372365468944,0,0.419959264876088,0,0,0,0,0.771778308107841,0.286533439938757,0,4.65327859977075,3.70293685490423,5.07065122804943,2.03306719241479,0.889294796111139,0.899899717281399,0,2.1314403448383,2.69640099466564,6.91592949578798,12.2353742524004,10.6654691282036,11.1472229516232,5.71301968807607,4.19650227808066,4.77714116938321,4.02550978276593,12.8690630125403,4.40463523997555,3.57524546638526,3.07213066512487,3.29715719325485,4.57438218012048,4.16730696445408,3.62937898701795,1.12552522006336,2.44477196442896,4.71405736757868,5.41012387036591,5.40558392893372,7.19398836665249,4.45872204630035,0.289864488701678,0,0,0,0,0,0.561777680527007,0,0,0,0.704217098883403,0,0,0,0,0,0,0,0,0,2.77576522825817,0,0.691846491768175,0.452167921657868,0.352766121407114,0.125666591329675,0,0.289198713839823,0,1.94120219936891,0.883366073841574,0.484875253135222,0,1.75668478206928,1.46612694769419,0,0,0,0,3.44518470631092,2.28750301409313,4.27224797183739,3.82413504423008,3.83573185995496,2.0778804455956,3.0825839982874,0.101839363850316,0.870848794270651,1.0108910337347,0.420883711772948,0.260240885925407,0.459804208866946,0.900310649026746,0.90422890701429,0.95251098811859,0.512454881139399,0.937017245597288,0.517406741478031,0.215567992932842,0,0.703804496655795,1.31517439456545,1.11218899690239,1.74126083261083,0.411564272815887,0,0,0,0,0.621377317606506,0.703578179943289,1.2604344302271,1.18372367792605,0.787056926989615,0.462801338662135,0,0.268273401399619,0.467061369468678,0.329119699826961,0.164167464079095,0.405344047729279,0.877199924551994,0.439100230582101,0,1.89260953707715,4.83651678182637,0,0,0.426576501070468,0.232236671860439,0.128867461322093,0.201683524623343,0,0.190225626112559,0,0.164698954724011,0.251335208800269,0,0,0,0,0,0.379335801906163,0.685491075658373,0,0.203651327845314,0,0,0.0632365371242573,0,0,0,0,0,0.393117990226406,0,0,0.482354319504834,0.25462585178142,0,0,0.274561413188081,1.43768206527355,0,0.312037673114561,0,0,0,0,0.189491411770485,0.977789858652155,0.339490171550376,0.234690248288502,0.167506257441816,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,2.72936002979246,3.16471553798949,0,1.26235463602186,1.57754109708128,0.780877488593277,1.93881057959519,0.955875191810208,0.668396022247182,0.849229592366497,1.61924280669958,1.75353514746787,0.395287777946524,1.60660658210904,0,0.712262414669021,0.488660878060728,0,0,0.485561272309963,0.302323556964751,0,0,0,0,0.363533729477506,0,0,0,0,0,0.540183282093931,0.517434735131018,1.07168517515796,0.532020700926821,0.891844088010353,0.822745103010605,0.304464949114599,0.23467170806371,0.42366414172764,0,0,0,1.08563264870681,0.119372344003136,0.164140899745061,0,3.70850604021019,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0.432021363287205,0,0.218362563746178,0,0.165306911450672,0,0,0,0,0.747582730219894,0.66183396182839,0.583353565032143,1.16243841129958,1.18269287843545,1.05621514781179,0.2604087696879,0,0,0.288030006257865,0,0.405450430580328,0.513554785824136,0.25984164595559,0.179026695667481,0.198681354781265,0.120195449519969,0,0.100966449948148,0.15241361331,0,0.0974578807397524,0,0,1.36038230169127,0,0.0897138566094757,0,0,0,0,0.214368379079066,0,9.03602948187307,5.52390283808612,8.59343270159095,12.0297227640581,5.48066015816514,5.2877572817279,6.75022500231806,4.05289082901798,3.17199686288943,5.1776031175182,1.03787347584177,1.19707462020309,1.70733605754134,1.21553358534147,1.46729213839588,0.919217542250071,1.33348036680969,2.47242068686673,1.28367683836726,1.76888048234658,2.02783439912192,1.88626341386076,1.87283014939765,2.81710670581425,3.0440798546475,3.33405583898152,3.01299247456624,2.50781986602817,3.29668720642645,2.06078488188156,1.37147700954166,1.59728225543404,3.33810665926249,1.74415699958794,1.78807822789128,1.94613598150856,1.09756783723664,1.05227884575137,2.58027816307137,1.68342681497322,2.25406534435931,2.75812550651578,1.63692417267876,2.16911577660352,1.15743966588685,3.74715866906919,2.33931608445408,0.859484216193193,0.191288332068843,0.441182838239031,2.55054619182464
|short_description=p3@Dok5
}}
}}

Latest revision as of 05:51, 26 September 2015

Short description:p3@Dok5
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Dok5_5end
Coexpression cluster:MCL_coexpression_mm9:950
Association with transcript: 120bp_to_ENSMUST00000029075, NM_001163686, NM_029761, uc008ocg.2, uc012ckm.1_5end
EntrezGene:Dok5
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Dok5

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.40
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.11
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.09
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.42
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.77
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C34.65
Mouse Granule cells, donor2.CNhs12357.11731-123E33.70
Mouse Granule cells, donor3.CNhs12108.11636-122C75.07
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.03
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.13
Mouse Microglia, donor1.CNhs12629.11718-123C82.70
Mouse Microglia, donor2.CNhs12634.11736-123E86.92
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D512.24
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F510.67
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D911.15
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F15.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D54.20
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D24.78
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F24.03
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D612.87
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D34.40
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.58
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.07
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.30
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F44.57
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D84.17
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.63
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.44
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D64.71
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F65.41
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E15.41
Mouse Schwann, donor1.CNhs12507.11728-123D97.19
Mouse Schwann, donor2.CNhs12573.11746-123F94.46
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.70
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C52.78
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F51.94
bone (os femoris), neonate N16.CNhs11225.1525-43A60.88
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.76
cerebellum, neonate N30.CNhs11135.1395-42I21.47
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A43.45
corpus striatum, adult.CNhs10487.19-21D82.29
corpus striatum, neonate N00.CNhs11226.630-43F14.27
cortex, adult.CNhs10473.12-14D53.82
cortex, neonate N30.CNhs11107.1392-42F23.84
diencephalon, adult.CNhs10482.20-12F22.08
diencephalon, neonate N30.CNhs11201.1388-42B23.08
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.87
epididymis, adult.CNhs10490.58-23B21.01
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.90
eyeball, embryo E17.CNhs11023.1261-18D40.90
eyeball, neonate N00.CNhs11207.633-15C60.95
eyeball, neonate N01.CNhs11140.1532-43E70.51
eyeball, neonate N02.CNhs11205.1551-44G80.94
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.70
forelimb, embryo E14.CNhs10577.413-26A81.32
forelimb, embryo E15.CNhs11007.437-20E71.11
forelimb, embryo E17.CNhs10598.1517-43C41.74
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F50.70
heart, embryo E13.CNhs11013.376-3I91.26
heart, embryo E14.CNhs10597.403-26D41.18
heart, embryo E15.CNhs11017.431-16C80.79
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.47
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.41
heart, neonate N20.CNhs11127.821-26I60.88
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E81.89
hippocampus, neonate N00.CNhs11228.627-43G14.84
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.69
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.98
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C22.73
medulla oblongata, neonate N30.CNhs11200.1396-42A33.16
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.26
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.58
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.94
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.96
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.62
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.75
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I91.61
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.71
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C70.52
pituitary gland, embryo E14.CNhs11037.398-44A51.07
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.89
pituitary gland, embryo E17.CNhs11039.1265-44F50.82
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H31.09
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C93.71
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.43
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.75
testis, embryo E15.CNhs11034.443-27C50.66
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I51.16
testis, embryo E18.CNhs11027.503-18G51.18
testis, neonate N00.CNhs11189.1300-22B71.06
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.51
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B41.36
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A19.04
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A25.52
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A38.59
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D712.03
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A45.48
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A55.29
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A66.75
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.05
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.17
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A95.18
whole body, embryo E11.CNhs11014.324-5I81.04
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H21.71
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B11.47
whole body, embryo E16.CNhs10514.453-14F20.92
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.03
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.89
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.87
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.82
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.04
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G53.33
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.01
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.51
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G53.34
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.79
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.95
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.58
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.25
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.76
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.17
whole body, embryo E17.5.CNhs10513.490-9F91.16
whole body, embryo E17.CNhs10517.475-3I53.75
whole body, embryo E18.CNhs10516.493-3B32.34
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B42.55





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
nervous system3.36e-3175
central nervous system3.06e-2973
gray matter2.25e-2634
regional part of nervous system4.86e-2654
neural tube1.91e-2452
neural rod1.91e-2452
future spinal cord1.91e-2452
neural keel1.91e-2452
ectoderm-derived structure8.60e-2295
ectoderm8.60e-2295
presumptive ectoderm8.60e-2295
brain grey matter1.50e-2129
regional part of telencephalon1.50e-2129
telencephalon1.50e-2129
brain1.49e-1947
future brain1.49e-1947
regional part of brain3.92e-1946
neurectoderm7.31e-1964
neural plate7.31e-1964
presumptive neural plate7.31e-1964
anterior neural tube2.05e-1740
regional part of forebrain1.09e-1639
forebrain1.09e-1639
future forebrain1.09e-1639
ecto-epithelium2.87e-1673
cerebral cortex3.73e-1621
cerebral hemisphere3.73e-1621
pallium3.73e-1621
regional part of cerebral cortex2.76e-1217
pre-chordal neural plate4.20e-1249
structure with developmental contribution from neural crest1.02e-1192
occipital lobe1.04e-1010
visual cortex1.04e-1010
neocortex1.04e-1010
posterior neural tube1.14e-0712
chordal neural plate1.14e-0712
spinal cord9.38e-076
dorsal region element9.38e-076
dorsum9.38e-076
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