Personal tools

FFCP PHASE1:Mm9::chr2:94104902..94104921,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
 
(7 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr2:94104902..94104921,-
|DHSsupport=NA
|short_description=p1@Mir670
|DPIdataset=NA
|description=CAGE_peak_1_at_Mir670_5end
|association_with_transcript=0bp_to_ENSMUST00000134563,uc008lgr.1,uc008lgs.1_5end
|EntrezGene=735259
|EntrezGene=735259
|HGNC=
|HGNC=
|MCL_coexpression_id=580
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=0bp_to_ENSMUST00000134563,uc008lgr.1,uc008lgs.1_5end
|cluster_id=chr2:94104902..94104921,-
|description=CAGE_peak_1_at_Mir670_5end
|id=chr2:94104902..94104921,-
|ontology_enrichment_celltype=CL:0000117!6.60e-14!23;CL:0000337!6.60e-14!23;CL:0000540!1.44e-13!33;CL:0000047!1.44e-13!33;CL:0000031!1.44e-13!33;CL:0000404!1.44e-13!33;CL:0000221!7.08e-11!44;CL:0000133!7.08e-11!44;CL:0002319!2.69e-10!43;CL:0000393!2.53e-09!39;CL:0000211!2.53e-09!39;CL:0000055!6.32e-07!50
|ontology_enrichment_celltype_v019_2=CL:0000117,1.24e-20,23;CL:0000337,1.24e-20,23;CL:0000540,5.73e-16,33;CL:0000047,5.73e-16,33;CL:0000031,5.73e-16,33;CL:0000404,5.73e-16,33;CL:0000393,2.64e-12,39;CL:0000211,2.64e-12,39;CL:0000221,3.73e-12,44;CL:0000133,3.73e-12,44;CL:0002319,2.53e-11,43;CL:0002609,3.61e-07,6
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!9.55e-31!71;UBERON:0003075!9.55e-31!71;UBERON:0007284!9.55e-31!71;UBERON:0000033!1.81e-26!63;UBERON:0001017!4.62e-26!73;UBERON:0005743!4.62e-26!73;UBERON:0004121!5.45e-26!102;UBERON:0000924!5.45e-26!102;UBERON:0006601!5.45e-26!102;UBERON:0000073!4.66e-25!75;UBERON:0001016!4.66e-25!75;UBERON:0001049!1.14e-22!52;UBERON:0005068!1.14e-22!52;UBERON:0006241!1.14e-22!52;UBERON:0007135!1.14e-22!52;UBERON:0003056!1.08e-21!49;UBERON:0000955!2.94e-21!50;UBERON:0006238!2.94e-21!50;UBERON:0002616!1.92e-20!49;UBERON:0003080!5.76e-16!40;UBERON:0002780!1.05e-15!39;UBERON:0001890!1.05e-15!39;UBERON:0006240!1.05e-15!39;UBERON:0002020!1.36e-14!34;UBERON:0007811!1.96e-12!86;UBERON:0002791!2.93e-11!29;UBERON:0003528!2.93e-11!29;UBERON:0001893!2.93e-11!29;UBERON:0000153!4.45e-10!94;UBERON:0000956!1.30e-07!21;UBERON:0001869!1.30e-07!21;UBERON:0000203!1.30e-07!21;UBERON:0003076!1.93e-07!12;UBERON:0003057!1.93e-07!12;UBERON:0000468!7.48e-07!333;UBERON:0000970!8.91e-07!9;UBERON:0000019!8.91e-07!9;UBERON:0000047!8.91e-07!9;UBERON:0004088!8.91e-07!9;UBERON:0002104!8.91e-07!9;UBERON:0001456!8.91e-07!9;UBERON:0003072!8.91e-07!9;UBERON:0003071!8.91e-07!9;UBERON:0004128!8.91e-07!9
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.20e-39,64;UBERON:0003075,1.20e-39,64;UBERON:0007284,1.20e-39,64;UBERON:0010314,4.14e-37,92;UBERON:0010371,1.65e-34,73;UBERON:0004121,1.64e-33,95;UBERON:0000924,1.64e-33,95;UBERON:0006601,1.64e-33,95;UBERON:0000073,1.15e-32,54;UBERON:0001017,2.38e-30,73;UBERON:0003056,5.31e-30,49;UBERON:0001049,3.01e-29,52;UBERON:0005068,3.01e-29,52;UBERON:0006241,3.01e-29,52;UBERON:0007135,3.01e-29,52;UBERON:0001016,4.17e-29,75;UBERON:0000955,1.07e-25,47;UBERON:0006238,1.07e-25,47;UBERON:0002616,1.83e-24,46;UBERON:0002780,8.56e-22,39;UBERON:0001890,8.56e-22,39;UBERON:0006240,8.56e-22,39;UBERON:0003080,5.45e-21,40;UBERON:0002020,5.91e-21,34;UBERON:0003528,1.21e-15,29;UBERON:0002791,1.21e-15,29;UBERON:0001893,1.21e-15,29;UBERON:0000025,3.09e-13,114;UBERON:0004111,2.74e-12,122;UBERON:0000483,6.46e-11,174;UBERON:0000956,1.26e-10,21;UBERON:0001869,1.26e-10,21;UBERON:0000203,1.26e-10,21;UBERON:0000119,1.36e-10,176;UBERON:0000970,4.25e-10,9;UBERON:0000019,4.25e-10,9;UBERON:0000047,4.25e-10,9;UBERON:0010312,4.25e-10,9;UBERON:0004088,4.25e-10,9;UBERON:0002104,4.25e-10,9;UBERON:0001456,4.25e-10,9;UBERON:0003072,4.25e-10,9;UBERON:0004128,4.25e-10,9;UBERON:0003071,4.25e-10,9;UBERON:0000020,7.67e-09,12;UBERON:0001032,7.67e-09,12;UBERON:0004456,7.67e-09,12;UBERON:0003076,1.14e-08,12;UBERON:0003057,1.14e-08,12;UBERON:0000033,5.97e-08,13;UBERON:0005085,5.97e-08,13;UBERON:0001444,7.93e-08,11;UBERON:0002619,2.40e-07,17;UBERON:0001894,4.20e-07,10;UBERON:0006222,4.20e-07,10;UBERON:0001948,4.85e-07,5;UBERON:0002315,4.85e-07,5
|phase1_expression=0.80074423552397,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,1.09012578190223,0,0,0.139986421625363,0,0,0,0,0,0,0,4.24864567805155,2.11596391708813,3.80298842103708,0,0,0,0,0,0,0.768436610643109,2.69592992002042,3.51015439662396,2.94454945891935,4.28476476605705,4.19650227808066,4.65465037016825,3.25874601462004,1.83843757322004,3.30347642998166,1.14918604276669,2.30409799884365,3.42904348098504,2.10421580285542,2.08365348222704,2.51264699101243,0.56276261003168,1.5279824777681,5.89257170947335,5.26775218956681,2.23679334990361,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,3.94361575374705,0,0,0,0,0,0,0,0,0.148442139064825,0.693941307064543,0.304465478312141,0.922461989024234,0.60289056221049,0.940709657085638,0.376999773989026,0,0,0,0,0,0,0,4.39171195517321,6.0739544975902,0,0,0,0,0.898743836428936,2.28750301409313,11.3088916901578,2.25971616249959,1.53429274398198,1.87009240103604,1.62241263067758,0.203678727700633,0,0,1.26265113531884,1.95180664444056,3.67843367093557,5.40186389416048,4.21973489940002,3.12967896096108,4.09963904911519,2.62364828767241,4.39795730256327,0,0.189106080167819,0.175951124163949,0,0,0,0,0,0,0,0,3.10688658803253,3.28336483973535,3.06105504483725,5.20838418287463,4.52557733019029,2.62254091908543,2.09280550275367,0.804820204198858,1.63471479314037,1.6455984991348,0.32833492815819,0.162137619091711,0,0,0,2.3131894342054,2.88132914661996,0,0,0.853153002140936,0,0.515469845288373,0.201683524623343,0.444756087689741,0.190225626112559,0,0.988193728344065,0,0.198956472041151,0.779856348476481,0,0,0,0,0.228497025219458,0,0,0,0.0701358198903186,0.126473074248515,0.738050739898011,0.156998727841375,0.123397163921801,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,0,0.757965647081939,0.325929952884052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9266070798535,1.64096361229084,0.163934945376675,0,0.94652465824877,1.17131623288992,2.80050417052639,0,0,0.566153061577665,0.404810701674894,1.16902343164525,0.790575555893047,8.67567554338879,0.141940085208269,0.35613120733451,0.162886959353576,0.164970122972535,1.32745138339963,0,0,0.188605079755898,0.885905678642318,0.307435147943927,0.258428293168221,0.363533729477506,0.356497378384721,0.632073515871632,0,2.06271086496374,0.680879211507576,4.68158844481407,2.19909762430683,1.07168517515796,1.95074257006501,2.31879462882692,1.64549020602121,2.74018454203139,0,0,0,0,0,0,0,0,0,0.741701208042039,0,0.206386867963223,0,0,0,0,0,0,0,0,0.316335993581135,0.203319467126849,0.648032044930808,1.46361807210128,1.9652630737156,0.404593039154462,0.495920734352016,0.26175594198403,0,0,1.69107881605257,0.149516546043979,0.165458490457098,0.777804753376191,0.258319646955462,0,0.117357238645754,0.2604087696879,0.943734099831398,0.483168241652012,0.864090018773596,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.3885110557024,4.60325236507177,1.71868654031819,3.60891682921744,0.685082519770642,1.5107877947794,0,1.80128481289688,0.906284817968409,2.07104124700728,1.3492355185943,1.59609949360412,1.19513524027894,0.729320151204882,0.838452650511929,0.183843508450014,0.888986911206461,0.618105171716683,0.64183841918363,1.26348605881899,0.760437899670719,1.32038438970253,0.842773567228942,0.512201219238954,0.804096565378586,0.476293691283074,0.347652977834566,0.578727661391115,1.23625770240992,0.588795680537589,0.342869252385415,0.532427418478012,1.1921809497366,0.726732083161643,0.658765662907314,0.846146078916765,0.73171189149109,1.57841826862706,0.407412341537585,0,0.593175090620871,0.689531376628944,0.409231043169689,0.619747364743864,0.771626443924566,1.24905288968973,0.701794825336225,0.644613162144895,0,0,0.231867835620421
|phase1_expression=0.80074423552397,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,1.09012578190223,0,0,0.139986421625363,0,0,0,0,0,0,0,4.24864567805155,2.11596391708813,3.80298842103708,0,0,0,0,0,0,0.768436610643109,2.69592992002042,3.51015439662396,2.94454945891935,4.28476476605705,4.19650227808066,4.65465037016825,3.25874601462004,1.83843757322004,3.30347642998166,1.14918604276669,2.30409799884365,3.42904348098504,2.10421580285542,2.08365348222704,2.51264699101243,0.56276261003168,1.5279824777681,5.89257170947335,5.26775218956681,2.23679334990361,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,3.94361575374705,0,0,0,0,0,0,0,0,0.148442139064825,0.693941307064543,0.304465478312141,0.922461989024234,0.60289056221049,0.940709657085638,0.376999773989026,0,0,0,0,0,0,0,4.39171195517321,6.0739544975902,0,0,0,0,0.898743836428936,2.28750301409313,11.3088916901578,2.25971616249959,1.53429274398198,1.87009240103604,1.62241263067758,0.203678727700633,0,0,1.26265113531884,1.95180664444056,3.67843367093557,5.40186389416048,4.21973489940002,3.12967896096108,4.09963904911519,2.62364828767241,4.39795730256327,0,0.189106080167819,0.175951124163949,0,0,0,0,0,0,0,0,3.10688658803253,3.28336483973535,3.06105504483725,5.20838418287463,4.52557733019029,2.62254091908543,2.09280550275367,0.804820204198858,1.63471479314037,1.6455984991348,0.32833492815819,0.162137619091711,0,0,0,2.3131894342054,2.88132914661996,0,0,0.853153002140936,0,0.515469845288373,0.201683524623343,0.444756087689741,0.190225626112559,0,0.988193728344065,0,0.198956472041151,0.779856348476481,0,0,0,0,0.228497025219458,0,0,0,0.0701358198903186,0.126473074248515,0.738050739898011,0.156998727841375,0.123397163921801,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,0,0.757965647081939,0.325929952884052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9266070798535,1.64096361229084,0.163934945376675,0,0.94652465824877,1.17131623288992,2.80050417052639,0,0,0.566153061577665,0.404810701674894,1.16902343164525,0.790575555893047,8.67567554338879,0.141940085208269,0.35613120733451,0.162886959353576,0.164970122972535,1.32745138339963,0,0,0.188605079755898,0.885905678642318,0.307435147943927,0.258428293168221,0.363533729477506,0.356497378384721,0.632073515871632,0,2.06271086496374,0.680879211507576,4.68158844481407,2.19909762430683,1.07168517515796,1.95074257006501,2.31879462882692,1.64549020602121,2.74018454203139,0,0,0,0,0,0,0,0,0,0.741701208042039,0,0.206386867963223,0,0,0,0,0,0,0,0,0.316335993581135,0.203319467126849,0.648032044930808,1.46361807210128,1.9652630737156,0.404593039154462,0.495920734352016,0.26175594198403,0,0,1.69107881605257,0.149516546043979,0.165458490457098,0.777804753376191,0.258319646955462,0,0.117357238645754,0.2604087696879,0.943734099831398,0.483168241652012,0.864090018773596,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.3885110557024,4.60325236507177,1.71868654031819,3.60891682921744,0.685082519770642,1.5107877947794,0,1.80128481289688,0.906284817968409,2.07104124700728,1.3492355185943,1.59609949360412,1.19513524027894,0.729320151204882,0.838452650511929,0.183843508450014,0.888986911206461,0.618105171716683,0.64183841918363,1.26348605881899,0.760437899670719,1.32038438970253,0.842773567228942,0.512201219238954,0.804096565378586,0.476293691283074,0.347652977834566,0.578727661391115,1.23625770240992,0.588795680537589,0.342869252385415,0.532427418478012,1.1921809497366,0.726732083161643,0.658765662907314,0.846146078916765,0.73171189149109,1.57841826862706,0.407412341537585,0,0.593175090620871,0.689531376628944,0.409231043169689,0.619747364743864,0.771626443924566,1.24905288968973,0.701794825336225,0.644613162144895,0,0,0.231867835620421
|short_description=p1@Mir670
}}
}}

Latest revision as of 03:49, 27 September 2015

Short description:p1@Mir670
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Mir670_5end
Coexpression cluster:MCL_coexpression_mm9:580
Association with transcript: 0bp_to_ENSMUST00000134563, uc008lgr.1, uc008lgs.1_5end
EntrezGene:Mir670
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Mir670

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.80
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.68
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.09
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C34.25
Mouse Granule cells, donor2.CNhs12357.11731-123E32.12
Mouse Granule cells, donor3.CNhs12108.11636-122C73.80
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.70
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.51
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.94
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D54.20
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D24.65
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.26
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.15
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.30
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.43
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.10
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.08
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.51
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.53
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D65.89
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F65.27
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.24
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G63.94
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.69
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F50.60
adrenal gland, neonate N00.CNhs11191.1311-23C10.94
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B24.39
cerebellum, neonate N30.CNhs11135.1395-42I26.07
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.90
corpus striatum, adult.CNhs10487.19-21D82.29
corpus striatum, neonate N00.CNhs11226.630-43F111.31
cortex, adult.CNhs10473.12-14D52.26
cortex, neonate N30.CNhs11107.1392-42F21.53
diencephalon, adult.CNhs10482.20-12F21.87
diencephalon, neonate N30.CNhs11201.1388-42B21.62
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G41.26
eyeball, embryo E12.CNhs11016.345-16C61.95
eyeball, embryo E14.CNhs10521.399-16E23.68
eyeball, embryo E15.CNhs10593.426-16C95.40
eyeball, embryo E17.CNhs11023.1261-18D44.22
eyeball, neonate N00.CNhs11207.633-15C63.13
eyeball, neonate N01.CNhs11140.1532-43E74.10
eyeball, neonate N02.CNhs11205.1551-44G82.62
eyeball, neonate N16.CNhs11188.777-19A24.40
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E93.11
heart, embryo E12.CNhs11015.353-12F53.28
heart, embryo E13.CNhs11013.376-3I93.06
heart, embryo E14.CNhs10597.403-26D45.21
heart, embryo E15.CNhs11017.431-16C84.53
heart, embryo E16.CNhs11021.457-17C62.62
heart, embryo E17.CNhs11025.479-18E52.09
heart, embryo E18.CNhs11030.1283-20G30.80
heart, neonate N00.CNhs11213.639-21E31.63
heart, neonate N03.CNhs11221.1349-25I21.65
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E82.31
hippocampus, neonate N00.CNhs11228.627-43G12.88
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.52
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.99
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.78
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.74
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.76
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C21.93
medulla oblongata, neonate N30.CNhs11200.1396-42A31.64
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.80
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I98.68
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.89
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E64.68
pituitary gland, embryo E13.CNhs11009.370-44C72.20
pituitary gland, embryo E14.CNhs11037.398-44A51.07
pituitary gland, embryo E15.CNhs10592.427-16B91.95
pituitary gland, embryo E16.CNhs11036.449-43F62.32
pituitary gland, embryo E17.CNhs11039.1265-44F51.65
pituitary gland, neonate N00.CNhs11190.1308-22E92.74
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.74
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.65
stomach, embryo E17.CNhs11006.1035-18D51.46
stomach, embryo E18.CNhs10999.1286-20C61.97
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.50
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G51.69
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.78
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.94
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.86
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.39
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A24.60
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.72
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.61
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.80
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.07
whole body, embryo E11.CNhs11014.324-5I81.35
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H21.20
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.26
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.84
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.80
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.85
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F90.77
whole body, embryo E17.CNhs10517.475-3I51.25
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
neurectoderm1.20e-3964
neural plate1.20e-3964
presumptive neural plate1.20e-3964
structure with developmental contribution from neural crest4.14e-3792
ecto-epithelium1.65e-3473
ectoderm-derived structure1.64e-3395
ectoderm1.64e-3395
presumptive ectoderm1.64e-3395
regional part of nervous system1.15e-3254
central nervous system2.38e-3073
pre-chordal neural plate5.31e-3049
neural tube3.01e-2952
neural rod3.01e-2952
future spinal cord3.01e-2952
neural keel3.01e-2952
nervous system4.17e-2975
brain1.07e-2547
future brain1.07e-2547
regional part of brain1.83e-2446
regional part of forebrain8.56e-2239
forebrain8.56e-2239
future forebrain8.56e-2239
anterior neural tube5.45e-2140
gray matter5.91e-2134
brain grey matter1.21e-1529
regional part of telencephalon1.21e-1529
telencephalon1.21e-1529
tube3.09e-13114
anatomical conduit2.74e-12122
epithelium6.46e-11174
cerebral cortex1.26e-1021
cerebral hemisphere1.26e-1021
pallium1.26e-1021
cell layer1.36e-10176
eye4.25e-109
camera-type eye4.25e-109
simple eye4.25e-109
immature eye4.25e-109
ocular region4.25e-109
visual system4.25e-109
face4.25e-109
optic cup4.25e-109
optic vesicle4.25e-109
eye primordium4.25e-109
sense organ7.67e-0912
sensory system7.67e-0912
entire sense organ system7.67e-0912
posterior neural tube1.14e-0812
chordal neural plate1.14e-0812
head5.97e-0813
ectodermal placode5.97e-0813
subdivision of head7.93e-0811
regional part of cerebral cortex2.40e-0717
diencephalon4.20e-0710
future diencephalon4.20e-0710
regional part of spinal cord4.85e-075
gray matter of spinal cord4.85e-075
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr2:94104902..94104921,-&oldid=4291181"