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FFCP PHASE1:Mm9::chr9:121404796..121404807,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr9:121404796..121404807,-
|DHSsupport=NA
|short_description=p2@Cck
|DPIdataset=NA
|description=CAGE_peak_2_at_Cck_5end
|association_with_transcript=0bp_to_ENSMUST00000035120,NM_031161,uc009sdg.2,uc009sdh.2_5end
|EntrezGene=12424
|EntrezGene=12424
|HGNC=
|HGNC=
|MCL_coexpression_id=2
|TSSclassifier=NA
|UniProt=P09240,Q8R041
|UniProt=P09240,Q8R041
|association_with_transcript=0bp_to_ENSMUST00000035120,NM_031161,uc009sdg.2,uc009sdh.2_5end
|cluster_id=chr9:121404796..121404807,-
|description=CAGE_peak_2_at_Cck_5end
|id=chr9:121404796..121404807,-
|ontology_enrichment_celltype=CL:0000117!5.43e-09!23;CL:0000337!5.43e-09!23;CL:0000540!2.68e-07!33;CL:0000047!2.68e-07!33;CL:0000031!2.68e-07!33;CL:0000404!2.68e-07!33
|ontology_enrichment_celltype_v019_2=CL:0000117,5.26e-09,23;CL:0000337,5.26e-09,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!1.80e-21!52;UBERON:0005068!1.80e-21!52;UBERON:0006241!1.80e-21!52;UBERON:0007135!1.80e-21!52;UBERON:0000955!1.12e-20!50;UBERON:0006238!1.12e-20!50;UBERON:0001017!2.31e-20!73;UBERON:0005743!2.31e-20!73;UBERON:0000073!3.91e-20!75;UBERON:0001016!3.91e-20!75;UBERON:0002616!5.83e-20!49;UBERON:0000033!4.13e-19!63;UBERON:0004121!6.21e-18!102;UBERON:0000924!6.21e-18!102;UBERON:0006601!6.21e-18!102;UBERON:0002346!1.91e-17!71;UBERON:0003075!1.91e-17!71;UBERON:0007284!1.91e-17!71;UBERON:0003080!1.22e-16!40;UBERON:0003056!5.59e-16!49;UBERON:0002780!5.64e-16!39;UBERON:0001890!5.64e-16!39;UBERON:0006240!5.64e-16!39;UBERON:0002020!2.99e-14!34;UBERON:0002791!1.50e-11!29;UBERON:0003528!1.50e-11!29;UBERON:0001893!1.50e-11!29;UBERON:0007811!7.46e-09!86;UBERON:0002021!1.00e-08!10;UBERON:0000411!1.00e-08!10;UBERON:0001950!1.00e-08!10;UBERON:0000153!7.15e-08!94;UBERON:0000956!8.19e-08!21;UBERON:0001869!8.19e-08!21;UBERON:0000203!8.19e-08!21;UBERON:0002619!7.85e-07!17
|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.53e-30,54;UBERON:0001049,9.60e-28,52;UBERON:0005068,9.60e-28,52;UBERON:0006241,9.60e-28,52;UBERON:0007135,9.60e-28,52;UBERON:0001017,3.38e-24,73;UBERON:0002346,1.48e-23,64;UBERON:0003075,1.48e-23,64;UBERON:0007284,1.48e-23,64;UBERON:0000955,1.66e-23,47;UBERON:0006238,1.66e-23,47;UBERON:0001016,4.16e-23,75;UBERON:0002616,1.76e-22,46;UBERON:0010371,2.49e-21,73;UBERON:0004121,5.68e-21,95;UBERON:0000924,5.68e-21,95;UBERON:0006601,5.68e-21,95;UBERON:0003080,1.94e-20,40;UBERON:0002780,1.82e-19,39;UBERON:0001890,1.82e-19,39;UBERON:0006240,1.82e-19,39;UBERON:0003056,2.74e-18,49;UBERON:0002020,1.80e-17,34;UBERON:0003528,1.69e-13,29;UBERON:0002791,1.69e-13,29;UBERON:0001893,1.69e-13,29;UBERON:0002021,1.24e-12,10;UBERON:0000411,1.24e-12,10;UBERON:0001950,1.24e-12,10;UBERON:0010314,6.42e-12,92;UBERON:0002619,3.84e-09,17;UBERON:0000956,4.35e-08,21;UBERON:0001869,4.35e-08,21;UBERON:0000203,4.35e-08,21;UBERON:0003076,9.28e-08,12;UBERON:0003057,9.28e-08,12;UBERON:0002420,3.79e-07,8;UBERON:0007245,3.79e-07,8;UBERON:0010009,3.79e-07,8;UBERON:0010011,3.79e-07,8;UBERON:0000454,3.79e-07,8;UBERON:0001894,4.82e-07,10;UBERON:0006222,4.82e-07,10
|phase1_expression=0,0,0,0,0,2.85394762250213,3.97141489012394,0,0,0,0,0,0,0,0,0,0,0,0,0,20.0702164756525,0,0,1.91990907352088,1.37645568640302,0.57423196411502,0.86152399231815,0.430942465371778,0.570070258369122,1.26015064879965,1.33038306393183,0,0,0,0,0.664938581433969,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,2.22548106945558,1.05798195854407,2.53532561402472,0,0,0,0.988866362566974,0,0,0,0.622137673850866,0.945041568321835,0.630974884054146,5.71301968807607,8.39300455616131,0.857435594504678,0.575072826109418,0,23.1243350098716,66.1420411281272,56.8344173048101,2.1101806036831,1.00636407962651,1.56274011167028,15.9134309430787,30.9519435517424,39.1163514308634,5.59794312399969,4.12877874317399,4.65998614563251,0.151452386666368,0.377857800533928,0,0,0,0,0,0,6.31999890592883,0,0,0,0,0,0,0,0,0,0,3.76806803072898,0,0,0.520455980298408,0.304465478312141,0,0,0,0,0.494389935468748,0.289198713839823,0,0.647067399789637,0.220841518460394,0.484875253135222,1.86391761218122,20.2018749937968,15.4990563041957,0.766371165625774,0,0,0,40.8928445575166,33.8550446085784,2.26177833803156,272.904182701874,219.915293304084,71.6868753730482,77.0645999571849,0,0.373220911830279,0,2.52530227063769,1.95180664444056,0,0.180062129805349,0.150704817835715,0.204109497453984,0.2562274405697,0.281105173679186,3.10444044886819,0.215567992932842,0,0,0.43839146485515,0,1.0447564995665,0.411564272815887,0,0,0,0,0.414251545071004,0,0,0,0,0,0.232533944750408,0,0,0.16455984991348,0,0.243206428637567,0,0.439100230582101,0.134206418760372,253.819967916902,25.4174392576833,1.65209391491899,0.264450566663544,0.213288250535234,0.232236671860439,0.128867461322093,1.00841762311671,0.889512175379481,1.71203063501303,0.949058123089023,0.494096864172033,1.00534083520108,0.994782360205754,0.779856348476481,0.898819408654221,0.864552199498777,0.995706366271836,0.379335801906163,0.342745537829186,0,0.407302655690628,0.581857461502877,0.701358198903186,2.78240763346732,1.47610147979602,2.19798218977925,1.48076596706161,0,0.166845105716094,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,16.7199852826472,4.69092468718045,15.0917554588524,10.6662634798905,0,0.252470927204373,0.315508219416257,0.390438744296638,0.861693590931196,0,0.222798674082394,0.283076530788832,0.404810701674894,0.292255857911312,0.395287777946524,75.1891880427029,0,0.35613120733451,0.162886959353576,0.329940245945071,0,4.12727081463468,1.51161778482376,0.188605079755898,0.885905678642318,0,0,0,0,0,0,0,0.340439605753788,1.08036656418786,2.19909762430683,3.00071849044229,2.83744373827638,3.0322698992352,5.26556865926787,8.22055362609418,0.938686832254841,0,0.220528398054962,0.32977250588296,0.161464426695906,0.180938774784468,0.238744688006273,0,0,15.5757253688828,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.406638934253697,0,0,0,0,0.165306911450672,0.26175594198403,0.648074866458964,3.72803587852155,0,0.299033092087958,0.165458490457098,0,0,0.168956125490778,0,0,0,0,0,0,0,0.410843828659309,0,0,0,0.240390899039938,0,0,0.0762068066549998,0,0.194915761479505,0,0,0.453460767230423,0,0,0,3.28422309854724,0.375364950902364,0.36630324853453,0,0,154.177253034459,164.336109433062,135.203341171698,154.496010926975,211.690498609128,160.143506246617,177.530917560965,217.054819954074,238.352907125692,258.88015587591,0,0.399024873401031,0,1.21553358534147,0.209613162627982,1.2869045591501,1.55572709461131,1.85431551515005,0.320919209591815,0.758091635291392,1.2673964994512,1.50901073108861,1.49826411951812,0.89635213366817,1.43588672389033,1.42888107384922,1.39061191133827,0.578727661391115,2.47251540481984,0.735994600671987,0.685738504770831,1.06485483695602,0.715308569841963,1.59881058295561,0.564656282491984,0.761531471025089,2.0122077016005,1.31534855718921,1.49384525230448,0,0.474540072496697,0.591026894253381,1.22769312950907,2.16911577660352,0.578719832943424,2.24829520144151,0.935726433781634,0.859484216193193,0.765153328275374,1.98532277207564,0
|phase1_expression=0,0,0,0,0,2.85394762250213,3.97141489012394,0,0,0,0,0,0,0,0,0,0,0,0,0,20.0702164756525,0,0,1.91990907352088,1.37645568640302,0.57423196411502,0.86152399231815,0.430942465371778,0.570070258369122,1.26015064879965,1.33038306393183,0,0,0,0,0.664938581433969,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,2.22548106945558,1.05798195854407,2.53532561402472,0,0,0,0.988866362566974,0,0,0,0.622137673850866,0.945041568321835,0.630974884054146,5.71301968807607,8.39300455616131,0.857435594504678,0.575072826109418,0,23.1243350098716,66.1420411281272,56.8344173048101,2.1101806036831,1.00636407962651,1.56274011167028,15.9134309430787,30.9519435517424,39.1163514308634,5.59794312399969,4.12877874317399,4.65998614563251,0.151452386666368,0.377857800533928,0,0,0,0,0,0,6.31999890592883,0,0,0,0,0,0,0,0,0,0,3.76806803072898,0,0,0.520455980298408,0.304465478312141,0,0,0,0,0.494389935468748,0.289198713839823,0,0.647067399789637,0.220841518460394,0.484875253135222,1.86391761218122,20.2018749937968,15.4990563041957,0.766371165625774,0,0,0,40.8928445575166,33.8550446085784,2.26177833803156,272.904182701874,219.915293304084,71.6868753730482,77.0645999571849,0,0.373220911830279,0,2.52530227063769,1.95180664444056,0,0.180062129805349,0.150704817835715,0.204109497453984,0.2562274405697,0.281105173679186,3.10444044886819,0.215567992932842,0,0,0.43839146485515,0,1.0447564995665,0.411564272815887,0,0,0,0,0.414251545071004,0,0,0,0,0,0.232533944750408,0,0,0.16455984991348,0,0.243206428637567,0,0.439100230582101,0.134206418760372,253.819967916902,25.4174392576833,1.65209391491899,0.264450566663544,0.213288250535234,0.232236671860439,0.128867461322093,1.00841762311671,0.889512175379481,1.71203063501303,0.949058123089023,0.494096864172033,1.00534083520108,0.994782360205754,0.779856348476481,0.898819408654221,0.864552199498777,0.995706366271836,0.379335801906163,0.342745537829186,0,0.407302655690628,0.581857461502877,0.701358198903186,2.78240763346732,1.47610147979602,2.19798218977925,1.48076596706161,0,0.166845105716094,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,16.7199852826472,4.69092468718045,15.0917554588524,10.6662634798905,0,0.252470927204373,0.315508219416257,0.390438744296638,0.861693590931196,0,0.222798674082394,0.283076530788832,0.404810701674894,0.292255857911312,0.395287777946524,75.1891880427029,0,0.35613120733451,0.162886959353576,0.329940245945071,0,4.12727081463468,1.51161778482376,0.188605079755898,0.885905678642318,0,0,0,0,0,0,0,0.340439605753788,1.08036656418786,2.19909762430683,3.00071849044229,2.83744373827638,3.0322698992352,5.26556865926787,8.22055362609418,0.938686832254841,0,0.220528398054962,0.32977250588296,0.161464426695906,0.180938774784468,0.238744688006273,0,0,15.5757253688828,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.406638934253697,0,0,0,0,0.165306911450672,0.26175594198403,0.648074866458964,3.72803587852155,0,0.299033092087958,0.165458490457098,0,0,0.168956125490778,0,0,0,0,0,0,0,0.410843828659309,0,0,0,0.240390899039938,0,0,0.0762068066549998,0,0.194915761479505,0,0,0.453460767230423,0,0,0,3.28422309854724,0.375364950902364,0.36630324853453,0,0,154.177253034459,164.336109433062,135.203341171698,154.496010926975,211.690498609128,160.143506246617,177.530917560965,217.054819954074,238.352907125692,258.88015587591,0,0.399024873401031,0,1.21553358534147,0.209613162627982,1.2869045591501,1.55572709461131,1.85431551515005,0.320919209591815,0.758091635291392,1.2673964994512,1.50901073108861,1.49826411951812,0.89635213366817,1.43588672389033,1.42888107384922,1.39061191133827,0.578727661391115,2.47251540481984,0.735994600671987,0.685738504770831,1.06485483695602,0.715308569841963,1.59881058295561,0.564656282491984,0.761531471025089,2.0122077016005,1.31534855718921,1.49384525230448,0,0.474540072496697,0.591026894253381,1.22769312950907,2.16911577660352,0.578719832943424,2.24829520144151,0.935726433781634,0.859484216193193,0.765153328275374,1.98532277207564,0
|short_description=p2@Cck
}}
}}

Latest revision as of 08:25, 26 September 2015

Short description:p2@Cck
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Cck_5end
Coexpression cluster:MCL_coexpression_mm9:2
Association with transcript: 0bp_to_ENSMUST00000035120, NM_031161, uc009sdg.2, uc009sdh.2_5end
EntrezGene:Cck
Link to Zenbu:ZENBU


View on UCSC genome browser


Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression


Sample

p2@Cck

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I72.85
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I83.97
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A320.07
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.92
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.38
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.86
GP2+ M cell, pool3.CNhs13240.11847-124I20.43
Ileum epithelium, pool1.CNhs13199.10252-104B90.57
Ileum epithelium, pool2.CNhs13232.10253-104C11.26
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.33
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.66
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C32.23
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C72.54
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.62
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.95
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.63
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F15.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D58.39
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.86
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.58
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D323.12
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F366.14
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D756.83
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.11
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.01
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E415.91
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E530.95
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I639.12
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D65.60
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F64.13
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E14.66
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.38
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A76.32
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B63.77
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.65
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B220.20
cerebellum, neonate N30.CNhs11135.1395-42I215.50
colon, adult.CNhs10468.36-18H70.77
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A440.89
corpus striatum, adult.CNhs10487.19-21D833.86
corpus striatum, neonate N00.CNhs11226.630-43F12.26
cortex, adult.CNhs10473.12-14D5272.90
cortex, neonate N30.CNhs11107.1392-42F2219.92
diencephalon, adult.CNhs10482.20-12F271.69
diencephalon, neonate N30.CNhs11201.1388-42B277.06
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.37
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G42.53
eyeball, embryo E12.CNhs11016.345-16C61.95
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.20
eyeball, neonate N01.CNhs11140.1532-43E70.26
eyeball, neonate N02.CNhs11205.1551-44G80.28
eyeball, neonate N16.CNhs11188.777-19A23.10
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.24
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E8253.82
hippocampus, neonate N00.CNhs11228.627-43G125.42
intestinal mucosa, adult.CNhs10506.860-29I31.65
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H41.01
intestine, embryo E17.CNhs10582.482-18D30.89
intestine, embryo E18.CNhs10526.1289-20F71.71
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B81.01
intestine, neonate N07.CNhs11095.720-20F20.99
intestine, neonate N10.CNhs11098.755-23A50.78
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.86
intestine, neonate N30.CNhs11131.1384-42G11.00
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.58
kidney, neonate N00.CNhs11214.646-21G70.70
kidney, neonate N10.CNhs11206.758-6D52.78
kidney, neonate N20.CNhs11113.832-19I11.48
kidney, neonate N25.CNhs11122.1353-25F32.20
kidney, neonate N30.CNhs11203.1385-42H11.48
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B616.72
mammary gland, adult pregnant day19.CNhs10476.588-5H24.69
medulla oblongata, adult.CNhs10477.17-12C215.09
medulla oblongata, neonate N30.CNhs11200.1396-42A310.67
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.86
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I975.19
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F44.13
pancreas, embryo E15.CNhs11042.1556-45F21.51
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.89
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E61.08
pituitary gland, embryo E13.CNhs11009.370-44C72.20
pituitary gland, embryo E14.CNhs11037.398-44A53.00
pituitary gland, embryo E15.CNhs10592.427-16B92.84
pituitary gland, embryo E16.CNhs11036.449-43F63.03
pituitary gland, embryo E17.CNhs11039.1265-44F55.27
pituitary gland, neonate N00.CNhs11190.1308-22E98.22
placenta, adult pregnant day10.CNhs10472.539-13I70.94
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.18
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C915.58
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.65
submandibular gland, adult.CNhs10469.59-29C13.73
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.41
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E43.28
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1154.18
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2164.34
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3135.20
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7154.50
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4211.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5160.14
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6177.53
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7217.05
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8238.35
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9258.88
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F21.29
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.85
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.50
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.90
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.39
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.74
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.06
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.01
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.49
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.17
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I52.25
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D11.99
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data


Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)5.26e-0923
neuroblast (sensu Vertebrata)5.26e-0923

Uber anatomy
Ontology termp-valuen
regional part of nervous system6.53e-3054
neural tube9.60e-2852
neural rod9.60e-2852
future spinal cord9.60e-2852
neural keel9.60e-2852
central nervous system3.38e-2473
neurectoderm1.48e-2364
neural plate1.48e-2364
presumptive neural plate1.48e-2364
brain1.66e-2347
future brain1.66e-2347
nervous system4.16e-2375
regional part of brain1.76e-2246
ecto-epithelium2.49e-2173
ectoderm-derived structure5.68e-2195
ectoderm5.68e-2195
presumptive ectoderm5.68e-2195
anterior neural tube1.94e-2040
regional part of forebrain1.82e-1939
forebrain1.82e-1939
future forebrain1.82e-1939
pre-chordal neural plate2.74e-1849
gray matter1.80e-1734
brain grey matter1.69e-1329
regional part of telencephalon1.69e-1329
telencephalon1.69e-1329
occipital lobe1.24e-1210
visual cortex1.24e-1210
neocortex1.24e-1210
structure with developmental contribution from neural crest6.42e-1292
regional part of cerebral cortex3.84e-0917
cerebral cortex4.35e-0821
cerebral hemisphere4.35e-0821
pallium4.35e-0821
posterior neural tube9.28e-0812
chordal neural plate9.28e-0812
basal ganglion3.79e-078
nuclear complex of neuraxis3.79e-078
aggregate regional part of brain3.79e-078
collection of basal ganglia3.79e-078
cerebral subcortex3.79e-078
diencephalon4.82e-0710
future diencephalon4.82e-0710