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FFCP PHASE1:Mm9::chrX:133527792..133527811,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chrX:133527792..133527811,+
|DHSsupport=NA
|short_description=p2@Zcchc18
|DPIdataset=NA
|description=CAGE_peak_2_at_Zcchc18_5end
|association_with_transcript=-25bp_to_ENSMUST00000033804_5end
|EntrezGene=66995
|EntrezGene=66995
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q8VD24
|UniProt=Q8VD24
|association_with_transcript=-25bp_to_ENSMUST00000033804_5end
|cluster_id=chrX:133527792..133527811,+
|description=CAGE_peak_2_at_Zcchc18_5end
|id=chrX:133527792..133527811,+
|ontology_enrichment_celltype=CL:0000221!1.25e-13!44;CL:0000133!1.25e-13!44;CL:0000117!1.54e-13!23;CL:0000337!1.54e-13!23;CL:0002319!3.02e-13!43;CL:0000540!4.62e-13!33;CL:0000047!4.62e-13!33;CL:0000031!4.62e-13!33;CL:0000404!4.62e-13!33;CL:0000055!5.36e-10!50;CL:0000393!5.90e-10!39;CL:0000211!5.90e-10!39
|ontology_enrichment_celltype_v019_2=CL:0000117,1.77e-16,23;CL:0000337,1.77e-16,23;CL:0000221,2.90e-14,44;CL:0000133,2.90e-14,44;CL:0002319,8.42e-14,43;CL:0000540,8.84e-14,33;CL:0000047,8.84e-14,33;CL:0000031,8.84e-14,33;CL:0000404,8.84e-14,33;CL:0000393,5.60e-10,39;CL:0000211,5.60e-10,39
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!6.08e-35!73;UBERON:0005743!6.08e-35!73;UBERON:0000073!3.95e-34!75;UBERON:0001016!3.95e-34!75;UBERON:0002346!4.04e-33!71;UBERON:0003075!4.04e-33!71;UBERON:0007284!4.04e-33!71;UBERON:0004121!4.86e-31!102;UBERON:0000924!4.86e-31!102;UBERON:0006601!4.86e-31!102;UBERON:0001049!3.56e-29!52;UBERON:0005068!3.56e-29!52;UBERON:0006241!3.56e-29!52;UBERON:0007135!3.56e-29!52;UBERON:0000033!8.27e-29!63;UBERON:0000955!2.33e-27!50;UBERON:0006238!2.33e-27!50;UBERON:0002616!1.16e-26!49;UBERON:0003056!2.98e-26!49;UBERON:0003080!6.80e-24!40;UBERON:0002780!3.63e-23!39;UBERON:0001890!3.63e-23!39;UBERON:0006240!3.63e-23!39;UBERON:0002020!2.24e-21!34;UBERON:0002791!5.39e-18!29;UBERON:0003528!5.39e-18!29;UBERON:0001893!5.39e-18!29;UBERON:0007811!1.43e-14!86;UBERON:0000153!1.94e-14!94;UBERON:0000956!5.43e-13!21;UBERON:0001869!5.43e-13!21;UBERON:0000203!5.43e-13!21;UBERON:0002619!3.34e-11!17;UBERON:0002021!2.85e-08!10;UBERON:0000411!2.85e-08!10;UBERON:0001950!2.85e-08!10
|ontology_enrichment_uberon_v019_2=UBERON:0001017,6.47e-41,73;UBERON:0002346,2.13e-39,64;UBERON:0003075,2.13e-39,64;UBERON:0007284,2.13e-39,64;UBERON:0001016,4.84e-39,75;UBERON:0000073,8.71e-38,54;UBERON:0001049,2.36e-36,52;UBERON:0005068,2.36e-36,52;UBERON:0006241,2.36e-36,52;UBERON:0007135,2.36e-36,52;UBERON:0004121,3.70e-35,95;UBERON:0000924,3.70e-35,95;UBERON:0006601,3.70e-35,95;UBERON:0010371,4.16e-34,73;UBERON:0000955,6.45e-32,47;UBERON:0006238,6.45e-32,47;UBERON:0003056,1.42e-31,49;UBERON:0002616,4.67e-31,46;UBERON:0003080,2.15e-29,40;UBERON:0002780,1.74e-28,39;UBERON:0001890,1.74e-28,39;UBERON:0006240,1.74e-28,39;UBERON:0010314,7.36e-27,92;UBERON:0002020,2.97e-26,34;UBERON:0003528,4.93e-22,29;UBERON:0002791,4.93e-22,29;UBERON:0001893,4.93e-22,29;UBERON:0000956,8.51e-16,21;UBERON:0001869,8.51e-16,21;UBERON:0000203,8.51e-16,21;UBERON:0002619,1.44e-13,17;UBERON:0002021,6.40e-10,10;UBERON:0000411,6.40e-10,10;UBERON:0001950,6.40e-10,10;UBERON:0002420,2.23e-07,8;UBERON:0007245,2.23e-07,8;UBERON:0010009,2.23e-07,8;UBERON:0010011,2.23e-07,8;UBERON:0000454,2.23e-07,8;UBERON:0003076,2.79e-07,12;UBERON:0003057,2.79e-07,12;UBERON:0001894,2.97e-07,10;UBERON:0006222,2.97e-07,10
|phase1_expression=5.12476310735341,0,0,0,0,0,0,0.645616617207881,0,0,0,0,0,0.174840804837995,0,0,0,0.788655413395594,0.685572168028694,1.27316895539409,4.76242424845991,0,0,0,0.45881856213434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.304130793658544,0.367093504323363,0,1.52617609466313,3.07560655828261,2.72201858703997,2.65974201088189,10.062679505548,0.335565212115473,0,0.672187598284928,0,0,0,13.1505699558739,16.398720357433,8.87363964908651,0,0,0,0,0,2.39680088414724,2.68952813725088,4.25127410464758,5.26523159493594,4.6271491497304,32.5642122220336,22.5285911770646,7.22695715368229,9.20116521775069,6.43453150627015,6.60695285996332,11.3641730895817,10.2916377281683,13.1886287730194,17.6571152152651,16.6692278578163,11.725685958058,15.1945904708554,14.515833538797,15.3206864446307,18.2235751422852,15.8439528951505,0.302904773332736,0.226714680320357,0,0,0,0,0,0,0.702222100658759,0,0,0,4.3661460130771,0,0,0,0,0,0,0.91347103775248,0.517875767294343,1.63286352971307,3.99016251562112,2.74018930480927,1.84492397804847,3.16517545160507,1.64624189989987,0.251333182659351,0,0,0,0,0,0,0,7.02673912827713,5.02672096352292,0,0,0,0,24.2660835835813,36.1425476226715,24.5025986620086,25.2045264278801,28.3844157636667,22.648896856992,25.3096370385702,1.12023300235348,0.248813941220186,0,0.631325567659422,4.29397461776922,3.44853156650209,2.88099407688559,3.61691562805716,3.94611695077702,5.12454881139399,3.18585863503078,3.62184719034622,2.58681591519411,1.89106080167819,2.11141348996739,1.7535658594206,1.66828349535359,0,0,0.796137067273973,0,0,0,0.621377317606506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,28.3891430561572,17.3908794920991,0,0,0.853153002140936,1.39342003116263,0.515469845288373,1.00841762311671,0.889512175379481,0.570676878337677,0.949058123089023,0.658795818896044,0.754005626400808,0.994782360205754,0.19496408711912,0,0.216138049874694,0.199141273254367,2.27601481143698,1.5994791765362,1.1270773567308,0.814605311381257,0.969762435838129,1.05203729835478,0.632365371242573,0,0,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.947457058852424,0.488894929326078,0.339490171550376,0,0.167506257441816,0,0.195133647857799,0.472905432318573,0,0,0,0,0,0,0,0.491764273019036,0,14.4495530989013,16.8784828692773,0,0,1.57754109708128,2.34263246577983,2.36965737506079,0.238968797952552,0.668396022247182,0.283076530788832,2.02405350837447,1.75353514746787,0.790575555893047,17.0300297703558,0,0.534196811001766,0.651547837414304,0.494910368917606,0,1.69946445308487,2.11626489875326,0.565815239267694,0.590603785761546,0.614870295887855,0.775284879504663,0.727067458955011,0.356497378384721,0.316036757935816,0,0,8.17055053809091,7.20244376125241,7.50280365939976,5.5727629108214,4.78818630834139,3.92411398724555,5.92376474167636,7.00269382963578,0,0,0.441056796109924,0,0,0,0,0,0,12.9797711407357,0.170870880797853,0.206386867963223,0,0,0.27338845544205,0.686334519619568,0,0.559805809294632,0.414599921413271,0,1.73984796469624,1.21991680276109,0.756037385752609,0.836353184057875,0.87345025498471,0.539457385539283,0.826534557253359,0.523511883968059,0.129614973291793,0,0,0.149516546043979,0,0.388902376688095,0.129159823477731,0.337912250981556,0.234714477291508,0,0.104859344425711,0,0.576060012515731,0,0,0.410843828659309,0.129920822977795,0,0.198681354781265,0,0,0.201932899896295,0,0.201652370273681,0,0,0.116876902181569,0,0,0,0,0.386379188064381,0,0,0.214368379079066,0,36.7088697701093,32.2227665555024,33.8008352929244,29.5587473631143,23.2928056722018,14.3524840504043,25.6508550088086,26.1186297870048,30.8136838109259,17.6038505995619,2.07574695168353,2.79317411380722,4.43907374960749,0.972426868273176,2.51535795153579,2.02227859295016,4.22268782823069,4.73880631649457,4.49286893428541,4.04315538822076,4.81610669791456,2.45214243801899,2.43467919421694,2.62503124859964,3.50356360629241,1.42888107384922,3.70829843023538,1.92909220463705,2.47251540481984,2.79677948255355,4.80016953339582,2.8396128985494,2.62279808942053,2.18019624948493,3.67026583619789,3.04612588410035,3.47563148458268,3.15683653725411,3.66671107383827,4.48913817326191,2.37270036248348,3.44765688314472,3.6830793885272,3.25367366490529,1.15743966588685,4.24677982494508,2.10538447600868,3.65280791882107,1.91288332068843,1.10295709559758,1.39120701372253
|phase1_expression=5.12476310735341,0,0,0,0,0,0,0.645616617207881,0,0,0,0,0,0.174840804837995,0,0,0,0.788655413395594,0.685572168028694,1.27316895539409,4.76242424845991,0,0,0,0.45881856213434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.304130793658544,0.367093504323363,0,1.52617609466313,3.07560655828261,2.72201858703997,2.65974201088189,10.062679505548,0.335565212115473,0,0.672187598284928,0,0,0,13.1505699558739,16.398720357433,8.87363964908651,0,0,0,0,0,2.39680088414724,2.68952813725088,4.25127410464758,5.26523159493594,4.6271491497304,32.5642122220336,22.5285911770646,7.22695715368229,9.20116521775069,6.43453150627015,6.60695285996332,11.3641730895817,10.2916377281683,13.1886287730194,17.6571152152651,16.6692278578163,11.725685958058,15.1945904708554,14.515833538797,15.3206864446307,18.2235751422852,15.8439528951505,0.302904773332736,0.226714680320357,0,0,0,0,0,0,0.702222100658759,0,0,0,4.3661460130771,0,0,0,0,0,0,0.91347103775248,0.517875767294343,1.63286352971307,3.99016251562112,2.74018930480927,1.84492397804847,3.16517545160507,1.64624189989987,0.251333182659351,0,0,0,0,0,0,0,7.02673912827713,5.02672096352292,0,0,0,0,24.2660835835813,36.1425476226715,24.5025986620086,25.2045264278801,28.3844157636667,22.648896856992,25.3096370385702,1.12023300235348,0.248813941220186,0,0.631325567659422,4.29397461776922,3.44853156650209,2.88099407688559,3.61691562805716,3.94611695077702,5.12454881139399,3.18585863503078,3.62184719034622,2.58681591519411,1.89106080167819,2.11141348996739,1.7535658594206,1.66828349535359,0,0,0.796137067273973,0,0,0,0.621377317606506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,28.3891430561572,17.3908794920991,0,0,0.853153002140936,1.39342003116263,0.515469845288373,1.00841762311671,0.889512175379481,0.570676878337677,0.949058123089023,0.658795818896044,0.754005626400808,0.994782360205754,0.19496408711912,0,0.216138049874694,0.199141273254367,2.27601481143698,1.5994791765362,1.1270773567308,0.814605311381257,0.969762435838129,1.05203729835478,0.632365371242573,0,0,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.947457058852424,0.488894929326078,0.339490171550376,0,0.167506257441816,0,0.195133647857799,0.472905432318573,0,0,0,0,0,0,0,0.491764273019036,0,14.4495530989013,16.8784828692773,0,0,1.57754109708128,2.34263246577983,2.36965737506079,0.238968797952552,0.668396022247182,0.283076530788832,2.02405350837447,1.75353514746787,0.790575555893047,17.0300297703558,0,0.534196811001766,0.651547837414304,0.494910368917606,0,1.69946445308487,2.11626489875326,0.565815239267694,0.590603785761546,0.614870295887855,0.775284879504663,0.727067458955011,0.356497378384721,0.316036757935816,0,0,8.17055053809091,7.20244376125241,7.50280365939976,5.5727629108214,4.78818630834139,3.92411398724555,5.92376474167636,7.00269382963578,0,0,0.441056796109924,0,0,0,0,0,0,12.9797711407357,0.170870880797853,0.206386867963223,0,0,0.27338845544205,0.686334519619568,0,0.559805809294632,0.414599921413271,0,1.73984796469624,1.21991680276109,0.756037385752609,0.836353184057875,0.87345025498471,0.539457385539283,0.826534557253359,0.523511883968059,0.129614973291793,0,0,0.149516546043979,0,0.388902376688095,0.129159823477731,0.337912250981556,0.234714477291508,0,0.104859344425711,0,0.576060012515731,0,0,0.410843828659309,0.129920822977795,0,0.198681354781265,0,0,0.201932899896295,0,0.201652370273681,0,0,0.116876902181569,0,0,0,0,0.386379188064381,0,0,0.214368379079066,0,36.7088697701093,32.2227665555024,33.8008352929244,29.5587473631143,23.2928056722018,14.3524840504043,25.6508550088086,26.1186297870048,30.8136838109259,17.6038505995619,2.07574695168353,2.79317411380722,4.43907374960749,0.972426868273176,2.51535795153579,2.02227859295016,4.22268782823069,4.73880631649457,4.49286893428541,4.04315538822076,4.81610669791456,2.45214243801899,2.43467919421694,2.62503124859964,3.50356360629241,1.42888107384922,3.70829843023538,1.92909220463705,2.47251540481984,2.79677948255355,4.80016953339582,2.8396128985494,2.62279808942053,2.18019624948493,3.67026583619789,3.04612588410035,3.47563148458268,3.15683653725411,3.66671107383827,4.48913817326191,2.37270036248348,3.44765688314472,3.6830793885272,3.25367366490529,1.15743966588685,4.24677982494508,2.10538447600868,3.65280791882107,1.91288332068843,1.10295709559758,1.39120701372253
|short_description=p2@Zcchc18
}}
}}

Latest revision as of 15:03, 1 October 2015

Short description:p2@Zcchc18
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Zcchc18_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: -25bp_to_ENSMUST00000033804_5end
EntrezGene:Zcchc18
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Zcchc18

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G75.12
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.65
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.17
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.79
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.69
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.27
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A34.76
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.38
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.30
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.53
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B83.08
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.72
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.66
Mouse Astrocytes, donor3.CNhs12107.11633-122C410.06
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.34
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.67
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C313.15
Mouse Granule cells, donor2.CNhs12357.11731-123E316.40
Mouse Granule cells, donor3.CNhs12108.11636-122C78.87
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C82.40
Mouse Microglia, donor2.CNhs12634.11736-123E82.69
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D54.25
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F55.27
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D94.63
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F132.56
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D522.53
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D27.23
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F29.20
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D66.43
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D36.61
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F311.36
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D710.29
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D413.19
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F417.66
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D816.67
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E411.73
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E515.19
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I614.52
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D615.32
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F618.22
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E115.84
Mouse Schwann, donor1.CNhs12507.11728-123D90.30
Mouse Schwann, donor2.CNhs12573.11746-123F90.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G64.37
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.91
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D71.63
adrenal gland, embryo E14.CNhs11038.406-44C53.99
adrenal gland, embryo E16.CNhs11004.1254-43D62.74
adrenal gland, embryo E17.CNhs11043.1263-45I11.84
adrenal gland, embryo E18.CNhs11026.1262-18F53.17
adrenal gland, neonate N00.CNhs11191.1311-23C11.65
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B27.03
cerebellum, neonate N30.CNhs11135.1395-42I25.03
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A424.27
corpus striatum, adult.CNhs10487.19-21D836.14
corpus striatum, neonate N00.CNhs11226.630-43F124.50
cortex, adult.CNhs10473.12-14D525.20
cortex, neonate N30.CNhs11107.1392-42F228.38
diencephalon, adult.CNhs10482.20-12F222.65
diencephalon, neonate N30.CNhs11201.1388-42B225.31
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.12
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C64.29
eyeball, embryo E14.CNhs10521.399-16E23.45
eyeball, embryo E15.CNhs10593.426-16C92.88
eyeball, embryo E17.CNhs11023.1261-18D43.62
eyeball, neonate N00.CNhs11207.633-15C63.95
eyeball, neonate N01.CNhs11140.1532-43E75.12
eyeball, neonate N02.CNhs11205.1551-44G83.19
eyeball, neonate N16.CNhs11188.777-19A23.62
forelimb, embryo E11.CNhs10596.335-25E22.59
forelimb, embryo E12.CNhs10600.359-14H21.89
forelimb, embryo E13.CNhs10589.384-1E22.11
forelimb, embryo E14.CNhs10577.413-26A81.75
forelimb, embryo E15.CNhs11007.437-20E71.67
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.80
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E828.39
hippocampus, neonate N00.CNhs11228.627-43G117.39
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D51.39
intestine, embryo E15.CNhs10602.976-16D80.52
intestine, embryo E16.CNhs10585.463-22H41.01
intestine, embryo E17.CNhs10582.482-18D30.89
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E90.66
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F20.99
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I92.28
kidney, embryo E15.CNhs10997.434-16F81.60
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.81
kidney, embryo E18.CNhs11001.1288-20C70.97
kidney, neonate N00.CNhs11214.646-21G71.05
kidney, neonate N10.CNhs11206.758-6D50.63
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.95
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.47
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C214.45
medulla oblongata, neonate N30.CNhs11200.1396-42A316.88
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.58
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E22.34
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.37
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.02
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.75
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I917.03
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I40.65
oviduct, adult pregnant day01.CNhs10500.988-6G60.49
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.70
pancreas, embryo E15.CNhs11042.1556-45F22.12
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G88.17
pituitary gland, embryo E12.CNhs11018.346-16E67.20
pituitary gland, embryo E13.CNhs11009.370-44C77.50
pituitary gland, embryo E14.CNhs11037.398-44A55.57
pituitary gland, embryo E15.CNhs10592.427-16B94.79
pituitary gland, embryo E16.CNhs11036.449-43F63.92
pituitary gland, embryo E17.CNhs11039.1265-44F55.92
pituitary gland, neonate N00.CNhs11190.1308-22E97.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C912.98
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.69
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.56
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.41
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.74
stomach, embryo E15.CNhs10603.1252-16G81.22
stomach, embryo E16.CNhs11022.459-17D40.76
stomach, embryo E17.CNhs11006.1035-18D50.84
stomach, embryo E18.CNhs10999.1286-20C60.87
stomach, neonate N03.CNhs11193.1340-24B80.54
stomach, neonate N07.CNhs11210.718-18A90.83
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.41
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A136.71
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A232.22
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A333.80
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D729.56
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A423.29
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A514.35
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A625.65
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A726.12
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A830.81
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A917.60
whole body, embryo E11.CNhs11014.324-5I82.08
whole body, embryo E12.CNhs10587.857-27C92.79
whole body, embryo E13.CNhs10512.372-23H24.44
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B12.52
whole body, embryo E16.CNhs10514.453-14F22.02
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G54.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G54.74
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G54.49
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G54.04
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G54.82
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.45
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.43
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.63
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.50
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.71
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.80
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G54.80
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.84
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.18
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.67
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.05
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.48
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.16
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.67
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G54.49
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.37
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.45
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G53.68
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.25
whole body, embryo E17.5.CNhs10513.490-9F91.16
whole body, embryo E17.CNhs10517.475-3I54.25
whole body, embryo E18.CNhs10516.493-3B32.11
whole body, neonate N00.CNhs10525.657-19C23.65
whole body, neonate N01.CNhs10576.659-23C61.91
whole body, neonate N06.CNhs10515.692-21D11.10
whole body, neonate N10.CNhs10518.761-6B41.39





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.77e-1623
neuroblast (sensu Vertebrata)1.77e-1623
ectodermal cell2.90e-1444
neurectodermal cell2.90e-1444
neural cell8.42e-1443
neuron8.84e-1433
neuronal stem cell8.84e-1433
neuroblast8.84e-1433
electrically signaling cell8.84e-1433
electrically responsive cell5.60e-1039
electrically active cell5.60e-1039

Uber anatomy
Ontology termp-valuen
central nervous system6.47e-4173
neurectoderm2.13e-3964
neural plate2.13e-3964
presumptive neural plate2.13e-3964
nervous system4.84e-3975
regional part of nervous system8.71e-3854
neural tube2.36e-3652
neural rod2.36e-3652
future spinal cord2.36e-3652
neural keel2.36e-3652
ectoderm-derived structure3.70e-3595
ectoderm3.70e-3595
presumptive ectoderm3.70e-3595
ecto-epithelium4.16e-3473
brain6.45e-3247
future brain6.45e-3247
pre-chordal neural plate1.42e-3149
regional part of brain4.67e-3146
anterior neural tube2.15e-2940
regional part of forebrain1.74e-2839
forebrain1.74e-2839
future forebrain1.74e-2839
structure with developmental contribution from neural crest7.36e-2792
gray matter2.97e-2634
brain grey matter4.93e-2229
regional part of telencephalon4.93e-2229
telencephalon4.93e-2229
cerebral cortex8.51e-1621
cerebral hemisphere8.51e-1621
pallium8.51e-1621
regional part of cerebral cortex1.44e-1317
occipital lobe6.40e-1010
visual cortex6.40e-1010
neocortex6.40e-1010
basal ganglion2.23e-078
nuclear complex of neuraxis2.23e-078
aggregate regional part of brain2.23e-078
collection of basal ganglia2.23e-078
cerebral subcortex2.23e-078
posterior neural tube2.79e-0712
chordal neural plate2.79e-0712
diencephalon2.97e-0710
future diencephalon2.97e-0710
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