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FFCP PHASE1:Mm9::chrX:67618227..67618287,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chrX:67618227..67618287,-
|DHSsupport=NA
|short_description=p1@Ids
|DPIdataset=NA
|description=CAGE_peak_1_at_Ids_5end
|association_with_transcript=0bp_to_ENSMUST00000038111,ENSMUST00000101509,ENSMUST00000114633,NM_010498,uc012hjl.1_5end
|EntrezGene=15931
|EntrezGene=15931
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=F2Z439,Q08890,F7BPT3
|UniProt=F2Z439,Q08890,F7BPT3
|association_with_transcript=0bp_to_ENSMUST00000038111,ENSMUST00000101509,ENSMUST00000114633,NM_010498,uc012hjl.1_5end
|cluster_id=chrX:67618227..67618287,-
|description=CAGE_peak_1_at_Ids_5end
|id=chrX:67618227..67618287,-
|ontology_enrichment_celltype=CL:0000055!6.14e-14!50;CL:0002319!6.48e-13!43;CL:0000117!1.23e-12!23;CL:0000337!1.23e-12!23;CL:0000221!1.54e-12!44;CL:0000133!1.54e-12!44;CL:0000393!3.54e-12!39;CL:0000211!3.54e-12!39;CL:0000540!1.13e-10!33;CL:0000047!1.13e-10!33;CL:0000031!1.13e-10!33;CL:0000404!1.13e-10!33
|ontology_enrichment_celltype_v019_2=CL:0002319,6.48e-13,43;CL:0000117,1.23e-12,23;CL:0000337,1.23e-12,23;CL:0000221,1.54e-12,44;CL:0000133,1.54e-12,44;CL:0000393,3.54e-12,39;CL:0000211,3.54e-12,39;CL:0000540,1.13e-10,33;CL:0000047,1.13e-10,33;CL:0000031,1.13e-10,33;CL:0000404,1.13e-10,33
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!1.92e-26!75;UBERON:0001016!1.92e-26!75;UBERON:0001017!3.92e-26!73;UBERON:0005743!3.92e-26!73;UBERON:0001049!2.52e-22!52;UBERON:0005068!2.52e-22!52;UBERON:0006241!2.52e-22!52;UBERON:0007135!2.52e-22!52;UBERON:0004121!5.24e-22!102;UBERON:0000924!5.24e-22!102;UBERON:0006601!5.24e-22!102;UBERON:0000955!2.50e-21!50;UBERON:0006238!2.50e-21!50;UBERON:0002616!1.05e-20!49;UBERON:0002020!5.55e-20!34;UBERON:0000033!1.06e-18!63;UBERON:0002346!1.83e-17!71;UBERON:0003075!1.83e-17!71;UBERON:0007284!1.83e-17!71;UBERON:0002791!2.76e-17!29;UBERON:0003528!2.76e-17!29;UBERON:0001893!2.76e-17!29;UBERON:0003080!2.97e-16!40;UBERON:0002780!1.40e-15!39;UBERON:0001890!1.40e-15!39;UBERON:0006240!1.40e-15!39;UBERON:0003056!2.80e-14!49;UBERON:0000956!9.56e-13!21;UBERON:0001869!9.56e-13!21;UBERON:0000203!9.56e-13!21;UBERON:0002619!7.44e-11!17;UBERON:0004111!1.27e-09!122;UBERON:0000025!1.53e-08!114;UBERON:0002021!6.42e-08!10;UBERON:0000411!6.42e-08!10;UBERON:0001950!6.42e-08!10;UBERON:0007811!4.73e-07!86;UBERON:0003076!9.04e-07!12;UBERON:0003057!9.04e-07!12
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.92e-26,75;UBERON:0001017,3.92e-26,73;UBERON:0004121,2.36e-24,95;UBERON:0000924,2.36e-24,95;UBERON:0006601,2.36e-24,95;UBERON:0000073,1.45e-23,54;UBERON:0001049,2.52e-22,52;UBERON:0005068,2.52e-22,52;UBERON:0006241,2.52e-22,52;UBERON:0007135,2.52e-22,52;UBERON:0002346,3.06e-20,64;UBERON:0003075,3.06e-20,64;UBERON:0007284,3.06e-20,64;UBERON:0002020,5.55e-20,34;UBERON:0010371,1.53e-19,73;UBERON:0000955,1.83e-19,47;UBERON:0006238,1.83e-19,47;UBERON:0002616,7.47e-19,46;UBERON:0003528,2.76e-17,29;UBERON:0002791,2.76e-17,29;UBERON:0001893,2.76e-17,29;UBERON:0003080,2.97e-16,40;UBERON:0002780,1.40e-15,39;UBERON:0001890,1.40e-15,39;UBERON:0006240,1.40e-15,39;UBERON:0003056,2.80e-14,49;UBERON:0000956,9.56e-13,21;UBERON:0001869,9.56e-13,21;UBERON:0000203,9.56e-13,21;UBERON:0010314,2.10e-12,92;UBERON:0002619,7.44e-11,17;UBERON:0004111,1.27e-09,122;UBERON:0000025,1.53e-08,114;UBERON:0002021,6.42e-08,10;UBERON:0000411,6.42e-08,10;UBERON:0001950,6.42e-08,10;UBERON:0003076,9.04e-07,12;UBERON:0003057,9.04e-07,12
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046035128635,9.40897332065109,13.1017538247707,19.2856015330294,16.0347704107152,22.2492550686425,21.904930486313,19.2615187056947,3.94585057078933,9.27002585472668,10.2584264083401,17.1117045742762,13.949260935595,17.5714370510409,15.725869978531,16.2755481054938,11.1150905091254,7.24752362478018,9.21696020025169,10.1123558601017,5.0681303822541,7.9087437016917,5.71651621102298,3.22248052201467,8.14593554603186,5.4087952283986,7.38447635872886,8.4811817956444,6.85861259894999,8.06609481094724,7.9915462206597,7.69694733122636,9.11639837016238,25.3938029649037,1.77588762699252,2.06341870201794,2.68615386182526,36.7060228661162,15.5776454624481,21.0624367907355,29.7972046919902,25.0786052017682,212.911444666634,198.8605021711,183.326564300607,239.391483004757,179.491620179908,184.316110963087,166.055535057024,176.976232867119,188.054099728445,167.75434100759,7.68026372122907,9.97562183502578,17.0733605754134,23.0951381214879,10.4806581313991,18.0166638281014,21.3356858689551,28.2268028417285,25.0316983481616,20.2157769411038,26.1083678886947,31.5005990114747,24.3467919421694,25.482010657138,29.1772182294515,27.1487404031352,20.5115256922394,23.9207433374994,21.0163809409686,23.1102304611004,18.5149396288124,20.4097177083238,23.8436189947321,19.912459078629,24.9389858100626,23.6074756017777,25.9757721479337,23.6762740294059,20.5064211907251,26.9348290395714,23.845638642959,23.5425712877597,22.0984763311632,23.2405261778949,13.5034627686799,49.4624944317133,17.0770074165148,23.6358159453128,22.3807348520547,22.0591419119515,18.0856911783929
|phase1_expression=13.9329496981171,2.44282785347553,1.81999695755814,0.90739263392049,0.500895729946347,4.02910252588535,3.03696432774183,13.5579489613655,3.66050677594334,3.5109678948299,1.19852577757853,1.91453181588807,13.8672591244277,15.5608316305815,8.66085380720723,6.47920855647443,6.29605690315332,14.6689906891581,13.4372144933624,8.48779303596061,53.662316085325,4.56738375524072,2.61199789138935,6.23970448894286,6.65286915094793,1.72269589234506,3.4460959692726,4.95583835177545,6.46079626151671,6.30075324399827,2.43903561720835,0,1.23012957516914,0,4.04392267651784,3.82339684324532,2.85837098767317,4.60384793810598,7.0320181007142,1.57057123192139,9.99993529652724,14.3439551841274,3.88408282424923,55.394599909254,55.2504275146354,48.4563425706839,21.1245662973971,32.703773457067,41.3010023540807,41.4135685028224,29.3971485413261,28.7505128729943,4.69791296961662,7.25362142011344,6.04968838456435,20.5807548828758,20.3438742356517,24.7522604293172,72.2269765268764,87.2835115798854,65.9184659646426,24.3968063089775,35.5717918444456,19.3478439215501,24.7216590641744,19.1829631035447,26.0652096151012,22.6688800139717,47.9046008865167,52.5173100110277,50.2676657629803,77.125765789027,79.0709376606776,53.283497658505,46.4850534438446,55.1531271966013,103.508928139425,141.732945274558,127.493422602682,78.208568624005,96.9769022185542,74.4906119896167,135.682937514671,123.245011596938,145.15833538797,91.0402329113633,98.8059464745774,74.3733788842949,18.2500125932974,31.2110543241024,23.7688880735376,9.46466264679525,4.75979933595425,7.55584468292944,5.84798775702902,4.48026887097336,26.1226621445058,38.6876832252191,23.9003124234639,26.5004680882755,12.6759077799012,15.3991772897181,2.54805239706646,7.11066703153331,11.4740251735943,5.82727690592727,7.07734223020697,23.1793275829692,37.8049310124871,28.5008907004464,6.7659277438793,6.39377504455497,7.84092690670599,10.0984169170257,14.345822270556,17.5933227861546,7.91023896749996,45.6933967866921,12.3845477272982,12.6178142958979,9.71702681225732,13.091631834651,14.9113408974498,99.8382517809376,67.8607330075594,17.6265368093928,5.03223522924865,3.59941638596045,3.55796635804581,197.274272096151,200.842764637377,70.3664371832041,269.949169258605,192.553739369739,136.308957231071,146.828343076321,20.8770695893148,19.5318943857846,25.2722758433675,39.3526270507706,7.41686524887411,9.88579049063934,12.0641626969584,11.3028613376786,23.1324097114515,18.4483757210184,15.1796793786761,34.6662516790281,9.91612767491074,14.1829560125864,16.5394056714112,14.4669183402199,10.0097009721215,13.5818344943645,15.0220959577799,9.95171334092466,0.702213187313235,2.83082697826187,4.83077948972507,8.28503090142008,6.3322036194896,6.30217215113552,9.2330446878232,7.08351234290654,8.4846912088058,7.44108623201305,9.92611585178591,8.4071046504362,11.0255099442032,17.5659186564632,14.1870416705248,16.9591985413385,16.4662586468288,17.8494536951294,213.654587741153,58.0382013819164,14.2080076683033,5.81791246659797,9.17139477301506,8.82499353069666,9.40732467651281,9.27744213267376,7.78323153457046,11.0330863145284,10.4396393539793,10.8701310117847,10.5560787696113,20.8904295643208,18.7165523634355,15.2799299471218,12.3198688428576,16.1304431336037,8.15571974098251,6.16941968092536,16.9061603509621,6.72049381889537,5.81857461502877,9.67874314486396,18.8444880630287,33.0646731474309,32.0277404796405,33.1938370949643,10.0793893209631,3.33690211432188,2.75182593158484,7.42044970870017,2.84004169943904,4.10001171579109,3.05551022137704,2.87696137450811,5.5125977103512,4.66754402419738,10.0637744569148,12.6527922207291,6.55279113540577,8.84026072814891,8.61107584905178,15.9206362049911,80.7371441028062,7.95863929436036,11.0816183980578,7.1292936025579,8.21415869009757,10.0503754465089,19.7576221935391,23.2209040950781,25.8521636334153,27.9045508957456,26.9478559031153,40.3103754200716,39.8902308110219,47.7341893318988,27.142431109069,33.72215239676,24.5882136509518,13.7968373152366,113.669817711357,106.897058172089,15.7377547561608,19.6927323219411,17.6684602873104,17.1793047490521,26.2816545234015,13.1432838873904,19.6062833192507,17.5507449089076,17.8116708736954,20.1656541958805,15.8115111178609,124.993992088083,36.478601898525,17.0942979520565,18.4062264069541,40.4176801282712,26.5490276679926,11.4106898992841,10.883648050731,12.4479352638893,14.7650946440386,11.9899707698132,13.1798429515793,17.0860852854428,12.4774082434652,16.7499481705982,15.8127912862498,16.5016869197099,53.4490181033447,8.28281032544027,13.8413791647547,10.0738406464848,15.0739198595933,17.3017753074008,16.9485491220185,19.1812917942198,10.560226862867,7.83778662196135,29.109748543255,22.4245304000413,15.9849782428946,23.9442311964779,20.2932984805332,17.3989353729765,15.4484843413821,164.472242883322,10.0813819670733,13.8279201535359,13.519200497989,10.1718966782533,14.6262823661497,10.2950177942935,8.49892149969276,6.71766971153558,8.29199842826543,19.0934123603023,14.0769517143605,10.5726122905961,12.2046035128635,9.40897332065109,13.1017538247707,19.2856015330294,16.0347704107152,22.2492550686425,21.904930486313,19.2615187056947,3.94585057078933,9.27002585472668,10.2584264083401,17.1117045742762,13.949260935595,17.5714370510409,15.725869978531,16.2755481054938,11.1150905091254,7.24752362478018,9.21696020025169,10.1123558601017,5.0681303822541,7.9087437016917,5.71651621102298,3.22248052201467,8.14593554603186,5.4087952283986,7.38447635872886,8.4811817956444,6.85861259894999,8.06609481094724,7.9915462206597,7.69694733122636,9.11639837016238,25.3938029649037,1.77588762699252,2.06341870201794,2.68615386182526,36.7060228661162,15.5776454624481,21.0624367907355,29.7972046919902,25.0786052017682,212.911444666634,198.8605021711,183.326564300607,239.391483004757,179.491620179908,184.316110963087,166.055535057024,176.976232867119,188.054099728445,167.75434100759,7.68026372122907,9.97562183502578,17.0733605754134,23.0951381214879,10.4806581313991,18.0166638281014,21.3356858689551,28.2268028417285,25.0316983481616,20.2157769411038,26.1083678886947,31.5005990114747,24.3467919421694,25.482010657138,29.1772182294515,27.1487404031352,20.5115256922394,23.9207433374994,21.0163809409686,23.1102304611004,18.5149396288124,20.4097177083238,23.8436189947321,19.912459078629,24.9389858100626,23.6074756017777,25.9757721479337,23.6762740294059,20.5064211907251,26.9348290395714,23.845638642959,23.5425712877597,22.0984763311632,23.2405261778949,13.5034627686799,49.4624944317133,17.0770074165148,23.6358159453128,22.3807348520547,22.0591419119515,18.0856911783929
|short_description=p1@Ids
}}
}}

Latest revision as of 23:08, 1 October 2015

Short description:p1@Ids
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Ids_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_ENSMUST00000038111, ENSMUST00000101509, ENSMUST00000114633, NM_010498, uc012hjl.1_5end
EntrezGene:Ids
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Ids

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G713.93
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I52.44
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.82
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.91
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I74.03
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I83.04
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E913.56
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E73.66
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F23.51
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.20
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.91
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E413.87
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E815.56
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A18.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A36.48
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A56.30
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A214.67
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A413.44
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A68.49
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A353.66
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H24.57
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I92.61
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D16.24
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D26.65
GP2+ M cell, pool1.CNhs13228.11845-124H91.72
GP2+ M cell, pool2.CNhs13231.11846-124I13.45
GP2+ M cell, pool3.CNhs13240.11847-124I24.96
Ileum epithelium, pool1.CNhs13199.10252-104B96.46
Ileum epithelium, pool2.CNhs13232.10253-104C16.30
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C82.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F54.04
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F63.82
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F72.86
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G84.60
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H17.03
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.57
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G910.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H214.34
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H43.88
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D855.39
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D955.25
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B348.46
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B721.12
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C232.70
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B841.30
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C341.41
Mouse Astrocytes, donor2.CNhs12078.11552-120C429.40
Mouse Astrocytes, donor3.CNhs12107.11633-122C428.75
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A24.70
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I97.25
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A16.05
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C120.58
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E120.34
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C524.75
Mouse Granule cells, donor1.CNhs12131.11713-123C372.23
Mouse Granule cells, donor2.CNhs12357.11731-123E387.28
Mouse Granule cells, donor3.CNhs12108.11636-122C765.92
Mouse Meningeal cells, donor1.CNhs12132.11716-123C624.40
Mouse Meningeal cells, donor3.CNhs12109.11639-122D135.57
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C719.35
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E724.72
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D219.18
Mouse Microglia, donor1.CNhs12629.11718-123C826.07
Mouse Microglia, donor2.CNhs12634.11736-123E822.67
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D547.90
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F552.52
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D950.27
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F177.13
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D579.07
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D253.28
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F246.49
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D655.15
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3103.51
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3141.73
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7127.49
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D478.21
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F496.98
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D874.49
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E4135.68
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5123.25
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I6145.16
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D691.04
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F698.81
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E174.37
Mouse Schwann, donor1.CNhs12507.11728-123D918.25
Mouse Schwann, donor2.CNhs12573.11746-123F931.21
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G323.77
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F79.46
Mouse hepatocyte, donor1.CNhs13078.11714-123C44.76
Mouse hepatocyte, donor3.CNhs12615.11637-122C87.56
Mouse hepatocyte, donor6.CNhs13090.11822-124F45.85
Mouse hepatocyte, donor8.CNhs13091.11824-124F64.48
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A726.12
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I738.69
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E323.90
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I826.50
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G612.68
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H115.40
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G111.47
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G25.83
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G37.08
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B623.18
accessory axillary lymph node, adult.CNhs10475.1063-29H937.80
adrenal gland, adult.CNhs10508.49-24D728.50
adrenal gland, embryo E14.CNhs11038.406-44C56.77
adrenal gland, embryo E16.CNhs11004.1254-43D66.39
adrenal gland, embryo E17.CNhs11043.1263-45I17.84
adrenal gland, embryo E18.CNhs11026.1262-18F510.10
adrenal gland, neonate N00.CNhs11191.1311-23C114.35
adrenal gland, neonate N25.CNhs11223.1377-27I317.59
amnion, adult pregnant day17.5.CNhs10488.583-22A87.91
aorta, adult.CNhs10498.46-23H145.69
bone (os femoris), adult.CNhs10483.56-12G212.38
bone (os femoris), neonate N02.CNhs11227.1985-43F512.62
bone (os femoris), neonate N16.CNhs11225.1525-43A69.72
bone (os femoris), neonate N20.CNhs11195.1350-25C313.09
cecum, adult.CNhs10467.37-13H414.91
cerebellum, adult.CNhs10494.15-8B299.84
cerebellum, neonate N30.CNhs11135.1395-42I267.86
colon, adult.CNhs10468.36-18H717.63
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C75.03
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D13.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D43.56
corpora quadrigemina, adult.CNhs10501.16-22A4197.27
corpus striatum, adult.CNhs10487.19-21D8200.84
corpus striatum, neonate N00.CNhs11226.630-43F170.37
cortex, adult.CNhs10473.12-14D5269.95
cortex, neonate N30.CNhs11107.1392-42F2192.55
diencephalon, adult.CNhs10482.20-12F2136.31
diencephalon, neonate N30.CNhs11201.1388-42B2146.83
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B120.88
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A219.53
epididymis, adult.CNhs10490.58-23B225.27
eyeball, adult.CNhs10484.31-12G439.35
eyeball, embryo E12.CNhs11016.345-16C67.42
eyeball, embryo E14.CNhs10521.399-16E29.89
eyeball, embryo E15.CNhs10593.426-16C912.06
eyeball, embryo E17.CNhs11023.1261-18D411.30
eyeball, neonate N00.CNhs11207.633-15C623.13
eyeball, neonate N01.CNhs11140.1532-43E718.45
eyeball, neonate N02.CNhs11205.1551-44G815.18
eyeball, neonate N16.CNhs11188.777-19A234.67
forelimb, embryo E11.CNhs10596.335-25E29.92
forelimb, embryo E12.CNhs10600.359-14H214.18
forelimb, embryo E13.CNhs10589.384-1E216.54
forelimb, embryo E14.CNhs10577.413-26A814.47
forelimb, embryo E15.CNhs11007.437-20E710.01
forelimb, embryo E17.CNhs10598.1517-43C413.58
forelimb, embryo E18.CNhs11008.1520-43B515.02
gonad, embryo E13.CNhs11044.1564-45I69.95
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D22.83
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D54.83
heart, embryo E11.CNhs10586.331-24E98.29
heart, embryo E12.CNhs11015.353-12F56.33
heart, embryo E13.CNhs11013.376-3I96.30
heart, embryo E14.CNhs10597.403-26D49.23
heart, embryo E15.CNhs11017.431-16C87.08
heart, embryo E16.CNhs11021.457-17C68.48
heart, embryo E17.CNhs11025.479-18E57.44
heart, embryo E18.CNhs11030.1283-20G39.93
heart, neonate N00.CNhs11213.639-21E38.41
heart, neonate N03.CNhs11221.1349-25I211.03
heart, neonate N10.CNhs11118.749-24G117.57
heart, neonate N16.CNhs11209.782-15G114.19
heart, neonate N20.CNhs11127.821-26I616.96
heart, neonate N25.CNhs11196.1351-25D316.47
heart, neonate N30.CNhs11202.1390-42D217.85
hippocampus, adult.CNhs10478.13-16E8213.65
hippocampus, neonate N00.CNhs11228.627-43G158.04
intestinal mucosa, adult.CNhs10506.860-29I314.21
intestine, adult.CNhs10496.178-9A35.82
intestine, embryo E12.CNhs11019.1251-16I59.17
intestine, embryo E13.CNhs11010.381-16D58.82
intestine, embryo E15.CNhs10602.976-16D89.41
intestine, embryo E16.CNhs10585.463-22H49.28
intestine, embryo E17.CNhs10582.482-18D37.78
intestine, embryo E18.CNhs10526.1289-20F711.03
intestine, neonate N00.CNhs11126.644-26D110.44
intestine, neonate N01.CNhs11192.1322-23E910.87
intestine, neonate N06.CNhs11102.688-20B810.56
intestine, neonate N07.CNhs11095.720-20F220.89
intestine, neonate N10.CNhs11098.755-23A518.72
intestine, neonate N20.CNhs11187.827-18D115.28
intestine, neonate N25.CNhs11121.1352-25E312.32
intestine, neonate N30.CNhs11131.1384-42G116.13
kidney, embryo E14.CNhs10606.411-4I98.16
kidney, embryo E15.CNhs10997.434-16F86.17
kidney, embryo E16.CNhs10584.464-22A516.91
kidney, embryo E17.CNhs11028.483-18I26.72
kidney, embryo E18.CNhs11001.1288-20C75.82
kidney, neonate N00.CNhs11214.646-21G79.68
kidney, neonate N10.CNhs11206.758-6D518.84
kidney, neonate N20.CNhs11113.832-19I133.06
kidney, neonate N25.CNhs11122.1353-25F332.03
kidney, neonate N30.CNhs11203.1385-42H133.19
liver, adult pregnant day01.CNhs10466.508-5B210.08
liver, embryo E12.CNhs10601.355-15F83.34
liver, embryo E13.CNhs10524.378-3H62.75
liver, embryo E14.CNhs10594.409-16E17.42
liver, embryo E15.CNhs10520.433-16D72.84
liver, embryo E16.CNhs10523.462-17F54.10
liver, embryo E17.CNhs10510.481-18A33.06
liver, embryo E18.CNhs10579.499-43G42.88
liver, neonate N00.CNhs11117.641-24F45.51
liver, neonate N03.CNhs11123.1345-25G24.67
liver, neonate N06.CNhs11101.684-20A810.06
liver, neonate N07.CNhs11103.716-20H212.65
liver, neonate N10.CNhs11115.751-24B96.55
liver, neonate N20.CNhs11220.823-25A38.84
liver, neonate N25.CNhs11198.1368-26H18.61
liver, neonate N30.CNhs11106.1382-42D115.92
lung, adult.CNhs10474.28-22B180.74
lung, embryo E12.CNhs10522.354-16G27.96
lung, embryo E14.CNhs10604.404-26F811.08
lung, embryo E15.CNhs11020.432-17C57.13
lung, embryo E16.CNhs10998.458-17B68.21
lung, embryo E17.CNhs10605.480-44A610.05
lung, embryo E18.CNhs10583.1287-20I619.76
lung, neonate N00.CNhs11224.640-42C623.22
lung, neonate N06.CNhs11212.683-20E525.85
lung, neonate N07.CNhs11111.715-19A327.90
lung, neonate N10.CNhs11219.750-23E626.95
lung, neonate N20.CNhs11109.822-18A440.31
lung, neonate N25.CNhs11119.1359-25C739.89
lung, neonate N30.CNhs11133.1394-42H247.73
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A127.14
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A133.72
mammary gland, adult lactating day02.CNhs10480.595-22B624.59
mammary gland, adult pregnant day19.CNhs10476.588-5H213.80
medulla oblongata, adult.CNhs10477.17-12C2113.67
medulla oblongata, neonate N30.CNhs11200.1396-42A3106.90
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C715.74
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C219.69
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E117.67
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E217.18
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E326.28
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D713.14
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D819.61
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D917.55
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D417.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D520.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D615.81
olfactory brain, adult.CNhs10489.18-22I9124.99
ovary, adult.CNhs10507.91-2I736.48
ovary, embryo E18.CNhs11040.505-44H717.09
ovary, neonate N00.CNhs11217.1299-22I418.41
oviduct, adult pregnant day01.CNhs10500.988-6G640.42
pancreas, adult.CNhs10486.34-16E426.55
pancreas, embryo E14.CNhs11012.405-44F411.41
pancreas, embryo E15.CNhs11042.1556-45F210.88
pancreas, embryo E16.CNhs11003.460-26E512.45
pancreas, embryo E17.CNhs10599.1558-45G314.77
pancreas, embryo E18.CNhs10580.1535-43I711.99
pancreas, neonate N00.CNhs11105.645-26G913.18
pancreas, neonate N01.CNhs11138.1531-43D717.09
pancreas, neonate N02.CNhs11139.1539-43D812.48
pancreas, neonate N16.CNhs11136.787-43B616.75
pancreas, neonate N25.CNhs11094.1555-45E215.81
pancreas, neonate N30.CNhs11182.1548-44H516.50
pituitary gland, adult.CNhs10493.21-1G853.45
pituitary gland, embryo E12.CNhs11018.346-16E68.28
pituitary gland, embryo E13.CNhs11009.370-44C713.84
pituitary gland, embryo E14.CNhs11037.398-44A510.07
pituitary gland, embryo E15.CNhs10592.427-16B915.07
pituitary gland, embryo E16.CNhs11036.449-43F617.30
pituitary gland, embryo E17.CNhs11039.1265-44F516.95
pituitary gland, neonate N00.CNhs11190.1308-22E919.18
placenta, adult pregnant day10.CNhs10472.539-13I710.56
placenta, adult pregnant day17.CNhs10464.577-18G37.84
prostate, adult.CNhs10470.859-1F829.11
skin, adult.CNhs10492.30-1C322.42
skin, neonate N00.CNhs11124.650-25G415.98
skin, neonate N03.CNhs11215.662-22H323.94
skin, neonate N06.CNhs11097.693-20I520.29
skin, neonate N10.CNhs11108.762-6C417.40
small intestine, neonate N16.CNhs11114.790-21I115.45
spinal cord, adult.CNhs10505.24-13C9164.47
spleen, adult.CNhs10465.25-2G210.08
spleen, embryo E16.CNhs11035.461-43C113.83
spleen, embryo E18.CNhs11011.1271-21F213.52
spleen, neonate N10.CNhs11116.752-24D110.17
spleen, neonate N20.CNhs11112.824-19H114.63
spleen, neonate N25.CNhs11099.1354-25G310.30
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C68.50
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C96.72
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D38.29
stomach, adult.CNhs10503.33-1H619.09
stomach, embryo E12.CNhs10588.356-43E314.08
stomach, embryo E15.CNhs10603.1252-16G810.57
stomach, embryo E16.CNhs11022.459-17D412.20
stomach, embryo E17.CNhs11006.1035-18D59.41
stomach, embryo E18.CNhs10999.1286-20C613.10
stomach, neonate N03.CNhs11193.1340-24B819.29
stomach, neonate N07.CNhs11210.718-18A916.03
stomach, neonate N25.CNhs11104.1355-25E422.25
stomach, neonate N30.CNhs11134.1386-42I121.90
submandibular gland, adult.CNhs10469.59-29C119.26
testis, adult.CNhs10504.57-7G53.95
testis, embryo E13.CNhs11031.389-23F59.27
testis, embryo E15.CNhs11034.443-27C510.26
testis, embryo E16.CNhs11033.470-26G517.11
testis, embryo E17.CNhs11029.486-18I513.95
testis, embryo E18.CNhs11027.503-18G517.57
testis, neonate N00.CNhs11189.1300-22B715.73
testis, neonate N07.CNhs11222.726-26I416.28
testis, neonate N10.CNhs11204.763-44D911.12
testis, neonate N20.CNhs11110.839-18H37.25
testis, neonate N30.CNhs11130.1391-42E29.22
thymus, adult.CNhs10471.38-12B510.11
thymus, embryo E14.CNhs11041.402-44I45.07
thymus, embryo E15.CNhs11005.430-45I27.91
thymus, embryo E16.CNhs11002.456-26C55.72
thymus, embryo E17.CNhs10581.478-18C13.22
thymus, embryo E18.CNhs10595.1273-19G48.15
thymus, neonate N02.CNhs11181.1541-43F85.41
thymus, neonate N03.CNhs11137.2104-43C77.38
thymus, neonate N06.CNhs11197.681-26C48.48
thymus, neonate N07.CNhs11211.713-19D36.86
thymus, neonate N10.CNhs11194.748-24E48.07
thymus, neonate N20.CNhs11186.820-7A27.99
thymus, neonate N25.CNhs11125.1362-25G77.70
thymus, neonate N30.CNhs11132.1393-42G29.12
tongue, adult.CNhs10499.32-1B425.39
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.78
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F72.06
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.69
urinary bladder, adult.CNhs10481.879-12E436.71
uterus, adult pregnant day19.CNhs10497.590-15F515.58
uterus, adult.CNhs10509.92-27E521.06
vagina, adult.CNhs10502.89-27D529.80
vesicular gland, adult.CNhs10491.51-27F825.08
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1212.91
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2198.86
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3183.33
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7239.39
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4179.49
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5184.32
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6166.06
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7176.98
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8188.05
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9167.75
whole body, embryo E11.CNhs11014.324-5I87.68
whole body, embryo E12.CNhs10587.857-27C99.98
whole body, embryo E13.CNhs10512.372-23H217.07
whole body, embryo E14.5.CNhs10578.420-27D223.10
whole body, embryo E14.CNhs10519.395-14B110.48
whole body, embryo E16.CNhs10514.453-14F218.02
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G521.34
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G528.23
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G525.03
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G520.22
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G526.11
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G531.50
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G524.35
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G525.48
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G529.18
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G527.15
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G520.51
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G523.92
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G521.02
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G523.11
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G518.51
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G520.41
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G523.84
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G519.91
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G524.94
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G523.61
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G525.98
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G523.68
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G520.51
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G526.93
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G523.85
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G523.54
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G522.10
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G523.24
whole body, embryo E17.5.CNhs10513.490-9F913.50
whole body, embryo E17.CNhs10517.475-3I549.46
whole body, embryo E18.CNhs10516.493-3B317.08
whole body, neonate N00.CNhs10525.657-19C223.64
whole body, neonate N01.CNhs10576.659-23C622.38
whole body, neonate N06.CNhs10515.692-21D122.06
whole body, neonate N10.CNhs10518.761-6B418.09





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neural cell6.48e-1343
CNS neuron (sensu Vertebrata)1.23e-1223
neuroblast (sensu Vertebrata)1.23e-1223
ectodermal cell1.54e-1244
neurectodermal cell1.54e-1244
electrically responsive cell3.54e-1239
electrically active cell3.54e-1239
neuron1.13e-1033
neuronal stem cell1.13e-1033
neuroblast1.13e-1033
electrically signaling cell1.13e-1033

Uber anatomy
Ontology termp-valuen
nervous system1.92e-2675
central nervous system3.92e-2673
ectoderm-derived structure2.36e-2495
ectoderm2.36e-2495
presumptive ectoderm2.36e-2495
regional part of nervous system1.45e-2354
neural tube2.52e-2252
neural rod2.52e-2252
future spinal cord2.52e-2252
neural keel2.52e-2252
neurectoderm3.06e-2064
neural plate3.06e-2064
presumptive neural plate3.06e-2064
gray matter5.55e-2034
ecto-epithelium1.53e-1973
brain1.83e-1947
future brain1.83e-1947
regional part of brain7.47e-1946
brain grey matter2.76e-1729
regional part of telencephalon2.76e-1729
telencephalon2.76e-1729
anterior neural tube2.97e-1640
regional part of forebrain1.40e-1539
forebrain1.40e-1539
future forebrain1.40e-1539
pre-chordal neural plate2.80e-1449
cerebral cortex9.56e-1321
cerebral hemisphere9.56e-1321
pallium9.56e-1321
structure with developmental contribution from neural crest2.10e-1292
regional part of cerebral cortex7.44e-1117
anatomical conduit1.27e-09122
tube1.53e-08114
occipital lobe6.42e-0810
visual cortex6.42e-0810
neocortex6.42e-0810
posterior neural tube9.04e-0712
chordal neural plate9.04e-0712
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