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{{f5samples
{{f5samples
|ancestors_in_anatomy_facet=UBERON:0000025,UBERON:0000061,UBERON:0000062,UBERON:0000119,UBERON:0000383,UBERON:0000465,UBERON:0000467,UBERON:0000468,UBERON:0000475,UBERON:0000479,UBERON:0000480,UBERON:0000481,UBERON:0000483,UBERON:0000486,UBERON:0000490,UBERON:0000914,UBERON:0000922,UBERON:0000923,UBERON:0000926,UBERON:0000948,UBERON:0001009,UBERON:0001015,UBERON:0001048,UBERON:0001062,UBERON:0001134,UBERON:0002036,UBERON:0002050,UBERON:0002204,UBERON:0002329,UBERON:0002385,UBERON:0002532,UBERON:0003059,UBERON:0003077,UBERON:0003081,UBERON:0003082,UBERON:0003084,UBERON:0003104,UBERON:0003914,UBERON:0004120,UBERON:0004140,UBERON:0004141,UBERON:0004290,UBERON:0004291,UBERON:0004535,UBERON:0004872,UBERON:0005291,UBERON:0005423,UBERON:0005498,UBERON:0007005,UBERON:0007100,UBERON:0009142
|DRA_sample_Accession=CAGE@SAMD00005296
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000004,CL:0000012,CL:0000034,CL:0000048,CL:0000055,CL:0000056,CL:0000144,CL:0000183,CL:0000187,CL:0000211,CL:0000220,CL:0000222,CL:0000255,CL:0000355,CL:0000393,CL:0000513,CL:0000548,CL:0000680,CL:0000723,CL:0000737,CL:0000746,CL:0002321,CL:0002371,CL:0002494
|accession_numbers=CAGE;DRX008200;DRR009072;DRZ000497;DRZ001882;DRZ011847;DRZ013232
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0007100,UBERON:0000948,UBERON:0010314,UBERON:0000062,UBERON:0004120,UBERON:0000061,UBERON:0000465,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0003103,UBERON:0010317,UBERON:0004535,UBERON:0001009
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0002371,CL:0000393,CL:0000183,CL:0000187,CL:0000211,CL:0000255,CL:0002494,CL:0000737,CL:0000746
|ancestors_in_disease_facet=
|ancestors_in_disease_facet=
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000118
|comment=
|comment=
|created_by=
|created_by=
|creation_date=
|creation_date=
|data_phase=2
|datafreeze_phase=2
|def=
|def=
|expression_enrichment_score=chr6:134210243..134210257,+!p1@TCF21!1.78!58.82!TCF21;;chr18:19749386..19749404,+!p2@GATA6!1.77!80.68!GATA6;;chr8:11561684..11561751,+!p1@GATA4!1.72!51.02!GATA4;;chr7:35293685..35293718,-!p1@TBX20!1.62!40.53!TBX20;;chr19:57352087..57352102,-!p1@PEG3,p1@ZIM2!1.47!28.77!PEG3;;chr5:92918919..92918942,+!p1@NR2F1!1.38!99.60!NR2F1;;chr6:19837592..19837621,+!p1@ID4!1.30!114.05!ID4;;chr4:174451370..174451387,-!p1@HAND2!1.29!18.28!HAND2;;chr2:19558373..19558392,-!p1@OSR1!1.28!48.97!OSR1;;chr18:19749541..19749557,+!p1@GATA6!1.25!51.78!GATA6;;chr8:55370487..55370503,+!p1@SOX17!1.25!16.62!SOX17;;chr5:92919375..92919438,+!p6@NR2F1!1.20!15.98!NR2F1;;chr18:19749353..19749367,+!p4@GATA6!1.17!13.68!GATA6;;chr20:62680984..62680999,-!p1@SOX18!1.14!16.88!SOX18;;chr19:46801639..46801699,+!p1@HIF3A!1.14!12.66!HIF3A;;chr11:32457075..32457095,-!p1@WT1!1.13!12.53!WT1;;chr11:61520075..61520136,+!p1@C11orf9!1.10!24.68!C11orf9;;chr5:92918956..92918969,+!p4@NR2F1!1.09!12.53!NR2F1;;chr19:47523058..47523114,+!p1@NPAS1!1.04!9.97!NPAS1;;chrX:131545273..131545287,-!p17@MBNL3!1.04!9.85!MBNL3;;chr11:46299199..46299233,+!p1@CREB3L1!1.02!49.87!CREB3L1;;chr17:1959369..1959388,+!p2@HIC1!1.01!24.81!HIC1;;chr1:40105299..40105326,-!p1@HEYL!1.00!9.08!HEYL;;chr16:8962202..8962222,-!p3@CARHSP1!0.99!15.98!CARHSP1;;chr6:85474299..85474324,-!p1@TBX18!0.99!15.85!TBX18;;chr3:25469724..25469773,+!p1@RARB!0.96!12.02!RARB;;chr18:53068911..53068935,-!p4@TCF4!0.94!8.69!TCF4;;chr1:8938709..8938720,-!p3@ENO1!0.93!381.16!ENO1;;chr19:45260775..45260838,+!p5@BCL3!0.93!9.85!BCL3;;chr5:92919100..92919135,+!p3@NR2F1!0.93!9.21!NR2F1;;chr14:62162285..62162296,+!p3@HIF1A!0.91!39.13!HIF1A;;chr17:70117153..70117174,+!p1@SOX9!0.88!70.71!SOX9;;chr14:62162258..62162269,+!p2@HIF1A!0.87!65.98!HIF1A;;chr1:170633348..170633399,+!p2@PRRX1!0.86!8.69!PRRX1;;chr15:66994561..66994597,+!p2@SMAD6!0.85!15.34!SMAD6;;chr4:174450089..174450153,-!p2@HAND2!0.85!6.01!HAND2;;chr15:66994663..66994680,+!p1@SMAD6!0.83!14.32!SMAD6;;chr15:66994615..66994630,+!p3@SMAD6!0.83!8.57!SMAD6;;chr17:26697276..26697303,-!p2@SEBOX,p2@VTN!0.83!5.75!SEBOX;;chr20:61051039..61051057,-!p1@GATA5!0.83!5.75!GATA5;;chr16:8962853..8962878,-!p1@CARHSP1!0.79!329.63!CARHSP1;;chr1:197886461..197886558,+!p1@LHX9!0.78!4.99!LHX9;;chr20:30193083..30193098,+!p1@ID1!0.77!437.93!ID1;;chr11:46299539..46299620,+!p2@CREB3L1!0.77!8.69!CREB3L1;;chr8:49833978..49833996,-!p1@SNAI2!0.75!106.13!SNAI2;;chr3:25470156..25470227,+!p2@RARB!0.75!4.60!RARB;;chr8:48650715..48650735,-!p1@CEBPD!0.74!644.17!CEBPD;;chr2:239756671..239756732,+!p1@TWIST2!0.74!15.60!TWIST2;;chr9:73029219..73029289,-!p2@KLF9!0.74!14.96!KLF9;;chr8:106330656..106330684,+!p1@ZFPM2!0.74!12.79!ZFPM2;;chr15:57511609..57511651,+!p2@TCF12!0.74!7.93!TCF12;;chr12:80084279..80084293,-!p8@PAWR!0.74!7.80!PAWR;;chr8:72756637..72756664,-!p3@MSC!0.74!5.24!MSC;;chr17:6926362..6926377,+!p1@BCL6B!0.74!4.48!BCL6B;;chr8:49833948..49833973,-!p2@SNAI2!0.72!30.43!SNAI2;;chr8:72756267..72756296,-!p4@MSC!0.71!6.39!MSC;;chr18:3450334..3450341,+!p15@TGIF1!0.71!5.50!TGIF1;;chr17:46132044..46132080,+!p4@NFE2L1!0.71!4.09!NFE2L1;;chr15:66994885..66994904,+!p7@SMAD6!0.70!3.96!SMAD6;;chrY:21906594..21906622,-!p1@KDM5D!0.70!3.96!KDM5D;;chrY:2803415..2803468,+!p1@ZFY!0.70!3.96!ZFY;;chr5:92918894..92918912,+!p2@NR2F1!0.69!14.06!NR2F1;;chr16:86600426..86600441,+!p1@FOXC2!0.69!10.61!FOXC2;;chr8:128749984..128750033,+!p4@MYC!0.68!15.47!MYC;;chr1:170632959..170632987,+!p4@PRRX1!0.68!4.22!PRRX1;;chr21:39870339..39870443,-!p1@ERG!0.68!3.84!ERG;;chr5:92919312..92919334,+!p13@NR2F1!0.68!3.84!NR2F1;;chr8:10588010..10588030,-!p1@SOX7!0.68!3.84!SOX7;;chr12:80085061..80085119,-!p6@PAWR!0.67!6.27!PAWR;;chr18:3450293..3450304,+!p4@TGIF1!0.66!9.72!TGIF1;;chr5:92919068..92919082,+!p5@NR2F1!0.66!4.35!NR2F1;;chrX:131545301..131545315,-!p22@MBNL3!0.66!3.58!MBNL3;;chr14:62162224..62162254,+!p1@HIF1A!0.65!597.63!HIF1A;;chr8:72756063..72756125,-!p1@MSC!0.65!7.67!MSC;;chr3:25469815..25469866,+!p3@RARB!0.65!3.45!RARB;;chr17:1958388..1958404,+!p1@HIC1!0.64!24.93!HIC1;;chr7:19157248..19157268,-!p1@TWIST1!0.64!10.48!TWIST1;;chr15:66994718..66994729,+!p4@SMAD6!0.64!3.32!SMAD6;;chr11:125034640..125034655,+!p1@PKNOX2!0.64!3.32!PKNOX2;;chr17:38498594..38498661,+!p2@RARA!0.63!12.40!RARA;;chr19:47922750..47922795,-!p1@MEIS3!0.63!5.75!MEIS3;;chr1:170632285..170632309,+!p1@PRRX1!0.63!3.84!PRRX1;;chr1:8938736..8938756,-!p1@ENO1!0.62!4146.97!ENO1;;chr1:23885981..23886002,-!p1@ID3!0.62!661.43!ID3;;chr6:126102292..126102329,+!p3@NCOA7!0.62!11.89!NCOA7;;chr8:72756667..72756736,-!p2@MSC!0.62!5.37!MSC;;chr10:131762504..131762555,-!p1@EBF3!0.62!3.20!EBF3;;chr8:128748308..128748324,+!p2@MYC!0.61!104.08!MYC;;chr10:63809013..63809041,+!p3@ARID5B!0.61!20.07!ARID5B;;chr2:85980951..85981004,+!p1@ATOH8!0.61!5.50!ATOH8;;chr2:85981222..85981259,+!p2@ATOH8!0.61!5.50!ATOH8;;chr8:37963466..37963506,+!p3@ASH2L!0.61!4.09!ASH2L;;chr8:72755987..72756002,-!p7@MSC!0.61!3.07!MSC;;chr19:50432453..50432468,+!p1@ATF5!0.60!203.94!ATF5;;chr12:8008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|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000056;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000187;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000222;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000513;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000737;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0002494;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000948;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002385;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0007100
|ffid_belonging_in_development=CL:0000355,CL:0000222,CL:0000513
|fonse_cell_line=
|fonse_cell_line=
|fonse_cell_line_closure=
|fonse_cell_line_closure=
Line 34: Line 42:
|fonse_treatment_closure=
|fonse_treatment_closure=
|has_quality=
|has_quality=
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Cardiac%2520Myocyte%252c%2520donor3.CNhs12571.11686-122I3.hg19.nobarcode.bam
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Cardiac%2520Myocyte%252c%2520donor3.CNhs12571.11686-122I3.hg19.ctss.bed.gz
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Cardiac%2520Myocyte%252c%2520donor3.CNhs12571.11686-122I3.hg19.nobarcode.rdna.fa.gz
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Cardiac%2520Myocyte%252c%2520donor3.CNhs12571.11686-122I3.hg38.nobarcode.bam
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Cardiac%2520Myocyte%252c%2520donor3.CNhs12571.11686-122I3.hg38.nobarcode.ctss.bed.gz
|id=FF:11686-122I3
|id=FF:11686-122I3
|is_a=EFO:0002091;;FF:0000002;;FF:0000118;;FF:0000210
|is_a=EFO:0002091;;FF:0000118
|is_obsolete=
|library_id=CNhs12571
|library_id_phase_based=2:CNhs12571
|microRNAs=
|microRNAs_nn=
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11686
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11686
|name=Cardiac Myocyte, donor3
|name=Cardiac Myocyte, donor3
|namespace=FANTOM5
|namespace=FANTOM5
Line 41: Line 61:
|profile_cagescan=,,,
|profile_cagescan=,,,
|profile_hcage=CNhs12571,LSID917,release012,COMPLETED
|profile_hcage=CNhs12571,LSID917,release012,COMPLETED
|profile_rnaseq=,,,
|profile_rnaseq=
|profile_srnaseq=,,,
|profile_srnaseq=,,,
|refex=http://refex.dbcls.jp/genelist.php?lang
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|rna_box=122
|rna_box=122
|rna_catalog_number=SC6205
|rna_catalog_number=SC6205
Line 56: Line 79:
|rna_weight_ug=10
|rna_weight_ug=10
|sample_age=
|sample_age=
|sample_category=primary cells
|sample_cell_catalog=N/A
|sample_cell_catalog=N/A
|sample_cell_line=
|sample_cell_line=
Line 68: Line 92:
|sample_ethnicity=
|sample_ethnicity=
|sample_experimental_condition=
|sample_experimental_condition=
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;1.17974582187463e-231!GO:0005737;cytoplasm;2.31183550128505e-206!GO:0043226;organelle;5.59504730295732e-181!GO:0043229;intracellular organelle;1.28974009495089e-180!GO:0043231;intracellular membrane-bound organelle;1.82486661652616e-180!GO:0043227;membrane-bound organelle;3.44281319900264e-180!GO:0044444;cytoplasmic part;5.32981276703514e-150!GO:0044422;organelle part;8.46669521541723e-137!GO:0044446;intracellular organelle part;2.67703539984925e-135!GO:0032991;macromolecular complex;3.36914775339373e-95!GO:0030529;ribonucleoprotein complex;1.57227150813394e-85!GO:0005515;protein binding;1.72866988508075e-83!GO:0044237;cellular metabolic process;1.82604879956411e-83!GO:0044238;primary metabolic process;1.82604879956411e-83!GO:0043170;macromolecule metabolic process;9.06491583494703e-74!GO:0005739;mitochondrion;5.703160832741e-70!GO:0043233;organelle lumen;3.45675597976154e-69!GO:0031974;membrane-enclosed lumen;3.45675597976154e-69!GO:0003723;RNA binding;3.44279702782737e-65!GO:0044428;nuclear part;1.584990756598e-61!GO:0005634;nucleus;3.1298396088935e-59!GO:0005840;ribosome;1.96735045991684e-54!GO:0019538;protein metabolic process;7.08215269568804e-54!GO:0031090;organelle membrane;1.81295499102178e-53!GO:0006412;translation;4.51344284177854e-52!GO:0016043;cellular component organization and biogenesis;6.86303911102657e-52!GO:0009058;biosynthetic process;1.00210449973775e-48!GO:0044260;cellular macromolecule metabolic process;1.58428878708577e-48!GO:0003735;structural constituent of ribosome;1.61261669828011e-48!GO:0044429;mitochondrial part;8.03896845795115e-48!GO:0043234;protein complex;1.50437538641757e-47!GO:0044267;cellular protein metabolic process;2.71555471140713e-47!GO:0015031;protein transport;1.29527408136632e-44!GO:0033036;macromolecule localization;3.01976695606628e-44!GO:0044249;cellular biosynthetic process;7.89669609960299e-44!GO:0006396;RNA processing;1.66134288659257e-42!GO:0033279;ribosomal subunit;1.9054553979788e-42!GO:0009059;macromolecule biosynthetic process;2.38490698154526e-42!GO:0031967;organelle envelope;2.06511702720388e-41!GO:0045184;establishment of protein localization;2.07516530741399e-41!GO:0008104;protein localization;2.47610899247489e-41!GO:0031975;envelope;5.36136795789294e-41!GO:0005829;cytosol;5.14486671238047e-40!GO:0031981;nuclear lumen;1.82020762647156e-36!GO:0043283;biopolymer metabolic process;3.90786193449588e-34!GO:0046907;intracellular transport;7.8958549985465e-34!GO:0065003;macromolecular complex assembly;1.01748252005021e-33!GO:0016071;mRNA metabolic process;2.65497914740561e-33!GO:0005830;cytosolic ribosome (sensu Eukaryota);1.48426313922704e-31!GO:0022607;cellular component assembly;6.39374307055291e-31!GO:0022613;ribonucleoprotein complex biogenesis and assembly;9.49472083788688e-31!GO:0010467;gene expression;9.95750157304097e-31!GO:0008380;RNA splicing;1.3051855554262e-30!GO:0006996;organelle organization and biogenesis;2.05794899693555e-30!GO:0005740;mitochondrial envelope;2.14949195991916e-30!GO:0043228;non-membrane-bound organelle;1.49622249821608e-29!GO:0043232;intracellular non-membrane-bound organelle;1.49622249821608e-29!GO:0006397;mRNA processing;4.85758069059917e-29!GO:0031966;mitochondrial membrane;1.36123257206434e-28!GO:0006886;intracellular protein transport;4.16500042831953e-28!GO:0019866;organelle inner membrane;3.34457795183156e-27!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;4.38848340093127e-26!GO:0005743;mitochondrial inner membrane;2.1315168191753e-25!GO:0044445;cytosolic part;3.80465579441119e-25!GO:0005783;endoplasmic reticulum;9.2310113202301e-25!GO:0012505;endomembrane system;7.98694716867079e-23!GO:0005681;spliceosome;9.48105068337896e-23!GO:0006457;protein folding;4.43458610925392e-22!GO:0015935;small ribosomal subunit;6.20693767392426e-22!GO:0005654;nucleoplasm;7.62008664761212e-22!GO:0006119;oxidative phosphorylation;1.29280773258053e-21!GO:0015934;large ribosomal subunit;1.82338100517871e-21!GO:0031980;mitochondrial lumen;2.89520161324899e-21!GO:0005759;mitochondrial matrix;2.89520161324899e-21!GO:0051649;establishment of cellular localization;3.4378666361334e-21!GO:0051641;cellular localization;5.96634748779129e-21!GO:0044455;mitochondrial membrane part;8.19843798062678e-21!GO:0000166;nucleotide binding;3.14695861475302e-20!GO:0044432;endoplasmic reticulum part;9.5055566697887e-20!GO:0048770;pigment granule;1.07204843821508e-19!GO:0042470;melanosome;1.07204843821508e-19!GO:0006259;DNA metabolic process;2.52215533338148e-19!GO:0022618;protein-RNA complex assembly;2.81097062686567e-19!GO:0007049;cell cycle;6.9979101658322e-19!GO:0016462;pyrophosphatase activity;7.6765923203976e-19!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;8.20094871564027e-19!GO:0016817;hydrolase activity, acting on acid anhydrides;1.26107007975556e-18!GO:0017111;nucleoside-triphosphatase activity;1.26070876831216e-17!GO:0044451;nucleoplasm part;1.45454189808104e-17!GO:0005746;mitochondrial respiratory chain;1.61961851442838e-17!GO:0005794;Golgi apparatus;1.08261277707999e-16!GO:0044265;cellular macromolecule catabolic process;1.34681111199965e-16!GO:0008135;translation factor activity, nucleic acid binding;2.49027265873045e-16!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);2.63773771374009e-16!GO:0016874;ligase activity;3.02415767984246e-16!GO:0000502;proteasome complex (sensu Eukaryota);5.72087402928934e-16!GO:0005730;nucleolus;6.00154601657368e-16!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);9.77397940788991e-16!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;1.29672764933416e-15!GO:0005761;mitochondrial ribosome;1.6687090932342e-15!GO:0000313;organellar ribosome;1.6687090932342e-15!GO:0051603;proteolysis involved in cellular protein catabolic process;2.97835094760413e-15!GO:0051186;cofactor metabolic process;3.65503538618997e-15!GO:0050136;NADH dehydrogenase (quinone) activity;6.06196844995698e-15!GO:0003954;NADH dehydrogenase activity;6.06196844995698e-15!GO:0008137;NADH dehydrogenase (ubiquinone) activity;6.06196844995698e-15!GO:0019941;modification-dependent protein catabolic process;6.16394811737776e-15!GO:0043632;modification-dependent macromolecule catabolic process;6.16394811737776e-15!GO:0006511;ubiquitin-dependent protein catabolic process;6.9535994946273e-15!GO:0008134;transcription factor binding;7.74071579159008e-15!GO:0044257;cellular protein catabolic process;9.36943372798358e-15!GO:0043285;biopolymer catabolic process;1.04164354755386e-14!GO:0044248;cellular catabolic process;1.23939017857791e-14!GO:0009057;macromolecule catabolic process;1.24581663995272e-14!GO:0006512;ubiquitin cycle;1.30679312869686e-14!GO:0032553;ribonucleotide binding;1.38637575483991e-14!GO:0032555;purine ribonucleotide binding;1.38637575483991e-14!GO:0022402;cell cycle process;2.10470960559125e-14!GO:0017076;purine nucleotide binding;2.53144052530583e-14!GO:0016192;vesicle-mediated transport;3.43371513381967e-14!GO:0051082;unfolded protein binding;3.51272196388703e-14!GO:0048193;Golgi vesicle transport;5.85339035506668e-14!GO:0006605;protein targeting;7.68802421989307e-14!GO:0042175;nuclear envelope-endoplasmic reticulum network;8.66716144412505e-14!GO:0003676;nucleic acid binding;8.73482558866789e-14!GO:0000278;mitotic cell cycle;1.564563919215e-13!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;2.24024885276454e-13!GO:0005789;endoplasmic reticulum membrane;2.3338257099188e-13!GO:0042775;organelle ATP synthesis coupled electron transport;2.42483252451154e-13!GO:0042773;ATP synthesis coupled electron transport;2.42483252451154e-13!GO:0003743;translation initiation factor activity;3.18524282408553e-13!GO:0006413;translational initiation;3.19424038053397e-13!GO:0030163;protein catabolic process;3.78900947981283e-13!GO:0030964;NADH dehydrogenase complex (quinone);3.88840504276567e-13!GO:0045271;respiratory chain complex I;3.88840504276567e-13!GO:0005747;mitochondrial respiratory chain complex I;3.88840504276567e-13!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;1.15240532665409e-12!GO:0043412;biopolymer modification;1.39501260082459e-12!GO:0042254;ribosome biogenesis and assembly;1.78715595168107e-12!GO:0006732;coenzyme metabolic process;3.21618852220456e-12!GO:0005635;nuclear envelope;5.60952110144238e-12!GO:0012501;programmed cell death;1.17896489894851e-11!GO:0009055;electron carrier activity;1.2900533684456e-11!GO:0006464;protein modification process;1.6886289397792e-11!GO:0000398;nuclear mRNA splicing, via spliceosome;2.20565793146656e-11!GO:0000375;RNA splicing, via transesterification reactions;2.20565793146656e-11!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;2.20565793146656e-11!GO:0005793;ER-Golgi intermediate compartment;2.30148434071954e-11!GO:0006915;apoptosis;2.84026837491279e-11!GO:0008219;cell death;2.03652428823768e-10!GO:0016265;death;2.03652428823768e-10!GO:0006974;response to DNA damage stimulus;2.6679005319696e-10!GO:0031965;nuclear membrane;2.67975659659506e-10!GO:0016070;RNA metabolic process;2.82422571154079e-10!GO:0006446;regulation of translational initiation;2.83517864904886e-10!GO:0005524;ATP binding;4.37044652426665e-10!GO:0044453;nuclear membrane part;4.83557919695408e-10!GO:0008565;protein transporter activity;5.2907749748732e-10!GO:0032559;adenyl ribonucleotide binding;5.74757935614974e-10!GO:0005694;chromosome;6.68313576089167e-10!GO:0003712;transcription cofactor activity;1.02149154890069e-09!GO:0051276;chromosome organization and biogenesis;1.02983194113811e-09!GO:0009259;ribonucleotide metabolic process;1.10402254899768e-09!GO:0030554;adenyl nucleotide binding;1.19244883448909e-09!GO:0003924;GTPase activity;1.41265570166325e-09!GO:0048523;negative regulation of cellular process;1.48160172856e-09!GO:0043687;post-translational protein modification;1.58422239681227e-09!GO:0006163;purine nucleotide metabolic process;1.83736226586305e-09!GO:0065004;protein-DNA complex assembly;1.88311376609618e-09!GO:0051301;cell division;1.93670637613754e-09!GO:0006913;nucleocytoplasmic transport;2.75894698383533e-09!GO:0006461;protein complex assembly;2.94090567604007e-09!GO:0044427;chromosomal part;3.54173745240305e-09!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;3.64695930663677e-09!GO:0005788;endoplasmic reticulum lumen;3.84311937121161e-09!GO:0000087;M phase of mitotic cell cycle;4.31063891972823e-09!GO:0006399;tRNA metabolic process;4.96811551595572e-09!GO:0009150;purine ribonucleotide metabolic process;5.00424533983164e-09!GO:0022403;cell cycle phase;5.02986474091294e-09!GO:0006164;purine nucleotide biosynthetic process;5.89648512539277e-09!GO:0007067;mitosis;5.89648512539277e-09!GO:0051726;regulation of cell cycle;5.89648512539277e-09!GO:0051169;nuclear transport;5.90054863576576e-09!GO:0000074;regulation of progression through cell cycle;6.25432305402385e-09!GO:0016604;nuclear body;8.30430613939834e-09!GO:0009060;aerobic respiration;8.9877631152504e-09!GO:0009260;ribonucleotide biosynthetic process;8.9877631152504e-09!GO:0006325;establishment and/or maintenance of chromatin architecture;1.01340107705105e-08!GO:0009056;catabolic process;1.05397939286449e-08!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;1.35580917873204e-08!GO:0016491;oxidoreductase activity;1.42822746660494e-08!GO:0009152;purine ribonucleotide biosynthetic process;1.57869743563718e-08!GO:0006333;chromatin assembly or disassembly;2.24887647510766e-08!GO:0016023;cytoplasmic membrane-bound vesicle;2.40723611120988e-08!GO:0031988;membrane-bound vesicle;2.42975889729533e-08!GO:0006888;ER to Golgi vesicle-mediated transport;2.75598474401441e-08!GO:0005525;GTP binding;2.87380981042236e-08!GO:0045333;cellular respiration;3.21862694329946e-08!GO:0006323;DNA packaging;3.23653476430222e-08!GO:0006364;rRNA processing;3.29930309793734e-08!GO:0006334;nucleosome assembly;3.47398837064521e-08!GO:0006281;DNA repair;3.52429939171201e-08!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;4.39500896535449e-08!GO:0048519;negative regulation of biological process;4.9112930902017e-08!GO:0008639;small protein conjugating enzyme activity;4.97552224129898e-08!GO:0006366;transcription from RNA polymerase II promoter;5.30324604904314e-08!GO:0016853;isomerase activity;5.32890742912424e-08!GO:0016072;rRNA metabolic process;6.30938198838774e-08!GO:0009199;ribonucleoside triphosphate metabolic process;6.36546263079384e-08!GO:0009141;nucleoside triphosphate metabolic process;6.58799858632854e-08!GO:0042623;ATPase activity, coupled;6.81349477638653e-08!GO:0065002;intracellular protein transport across a membrane;7.21043810710218e-08!GO:0004842;ubiquitin-protein ligase activity;8.71945283032235e-08!GO:0009719;response to endogenous stimulus;8.75566371128137e-08!GO:0030120;vesicle coat;9.24495279288808e-08!GO:0030662;coated vesicle membrane;9.24495279288808e-08!GO:0016887;ATPase activity;9.66765938144178e-08!GO:0005643;nuclear pore;9.67282748881211e-08!GO:0016879;ligase activity, forming carbon-nitrogen bonds;9.69048173090399e-08!GO:0015986;ATP synthesis coupled proton transport;9.76832528722012e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;9.76832528722012e-08!GO:0044431;Golgi apparatus part;9.76832528722012e-08!GO:0009205;purine ribonucleoside triphosphate metabolic process;9.86100172908732e-08!GO:0009144;purine nucleoside triphosphate metabolic process;9.86100172908732e-08!GO:0019787;small conjugating protein ligase activity;1.12528530960241e-07!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;1.22583869783231e-07!GO:0004812;aminoacyl-tRNA ligase activity;1.22583869783231e-07!GO:0016875;ligase activity, forming carbon-oxygen bonds;1.22583869783231e-07!GO:0017038;protein import;1.37262933505489e-07!GO:0009142;nucleoside triphosphate biosynthetic process;1.37262933505489e-07!GO:0009201;ribonucleoside triphosphate biosynthetic process;1.37262933505489e-07!GO:0031497;chromatin assembly;1.56626437839566e-07!GO:0006099;tricarboxylic acid cycle;1.63730843636916e-07!GO:0046356;acetyl-CoA catabolic process;1.63730843636916e-07!GO:0043038;amino acid activation;1.64470905648801e-07!GO:0006418;tRNA aminoacylation for protein translation;1.64470905648801e-07!GO:0043039;tRNA aminoacylation;1.64470905648801e-07!GO:0051246;regulation of protein metabolic process;1.95213242454565e-07!GO:0030532;small nuclear ribonucleoprotein complex;2.14699643673236e-07!GO:0046930;pore complex;2.17705429385965e-07!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;2.17705429385965e-07!GO:0009145;purine nucleoside triphosphate biosynthetic process;2.17705429385965e-07!GO:0009109;coenzyme catabolic process;2.43042747094404e-07!GO:0032561;guanyl ribonucleotide binding;2.45162566133793e-07!GO:0019001;guanyl nucleotide binding;2.45162566133793e-07!GO:0051187;cofactor catabolic process;2.57502207277761e-07!GO:0051188;cofactor biosynthetic process;3.02839193895786e-07!GO:0005768;endosome;3.63320339513828e-07!GO:0007005;mitochondrion organization and biogenesis;3.81855808423372e-07!GO:0048475;coated membrane;3.92357770953778e-07!GO:0030117;membrane coat;3.92357770953778e-07!GO:0031982;vesicle;4.26519618249731e-07!GO:0000785;chromatin;4.42647917841323e-07!GO:0004386;helicase activity;4.6720552665518e-07!GO:0008026;ATP-dependent helicase activity;4.80868856859057e-07!GO:0006260;DNA replication;4.99439776892767e-07!GO:0031410;cytoplasmic vesicle;5.04482031046824e-07!GO:0006084;acetyl-CoA metabolic process;5.52732169351175e-07!GO:0009117;nucleotide metabolic process;6.08395456830437e-07!GO:0016607;nuclear speck;6.17637071079603e-07!GO:0019829;cation-transporting ATPase activity;8.87492278379262e-07!GO:0050657;nucleic acid transport;8.87492278379262e-07!GO:0051236;establishment of RNA localization;8.87492278379262e-07!GO:0050658;RNA transport;8.87492278379262e-07!GO:0046034;ATP metabolic process;9.61724076143014e-07!GO:0003714;transcription corepressor activity;9.92099488513205e-07!GO:0006403;RNA localization;1.03804570476411e-06!GO:0016740;transferase activity;1.04861531913177e-06!GO:0008654;phospholipid biosynthetic process;1.2937063001881e-06!GO:0016881;acid-amino acid ligase activity;1.31439894068478e-06!GO:0005839;proteasome core complex (sensu Eukaryota);1.44255424260446e-06!GO:0008361;regulation of cell size;1.7158005684158e-06!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;1.85466063218133e-06!GO:0006754;ATP biosynthetic process;1.87385617061439e-06!GO:0006753;nucleoside phosphate metabolic process;1.87385617061439e-06!GO:0042981;regulation of apoptosis;1.87385617061439e-06!GO:0016859;cis-trans isomerase activity;1.91460507120771e-06!GO:0016049;cell growth;1.95138372798086e-06!GO:0043067;regulation of programmed cell death;1.95582316213722e-06!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;2.32814335541698e-06!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;2.52529616159473e-06!GO:0000279;M phase;2.55084040771933e-06!GO:0015078;hydrogen ion transmembrane transporter activity;2.64818299184225e-06!GO:0031252;leading edge;3.11197174302852e-06!GO:0003697;single-stranded DNA binding;4.18554431507114e-06!GO:0043069;negative regulation of programmed cell death;4.33323442488011e-06!GO:0015980;energy derivation by oxidation of organic compounds;4.33963681766637e-06!GO:0050794;regulation of cellular process;4.35666367951854e-06!GO:0043566;structure-specific DNA binding;4.41441418880713e-06!GO:0045259;proton-transporting ATP synthase complex;4.79319952471303e-06!GO:0001558;regulation of cell growth;5.62286561700533e-06!GO:0045786;negative regulation of progression through cell cycle;5.80423488295113e-06!GO:0006752;group transfer coenzyme metabolic process;6.20513976104428e-06!GO:0016469;proton-transporting two-sector ATPase complex;6.42448262779488e-06!GO:0043066;negative regulation of apoptosis;6.43922995800411e-06!GO:0005798;Golgi-associated vesicle;6.58581768027149e-06!GO:0005667;transcription factor complex;6.64957858707565e-06!GO:0006613;cotranslational protein targeting to membrane;7.16831934461525e-06!GO:0006793;phosphorus metabolic process;8.13686735742112e-06!GO:0006796;phosphate metabolic process;8.13686735742112e-06!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;8.14087994948694e-06!GO:0005773;vacuole;1.05289628495703e-05!GO:0006916;anti-apoptosis;1.07139664839233e-05!GO:0004298;threonine endopeptidase activity;1.07177612140735e-05!GO:0016564;transcription repressor activity;1.08142564205636e-05!GO:0044440;endosomal part;1.231362672767e-05!GO:0010008;endosome membrane;1.231362672767e-05!GO:0043623;cellular protein complex assembly;1.25414444606826e-05!GO:0009108;coenzyme biosynthetic process;1.36986584132765e-05!GO:0016310;phosphorylation;1.38082987074809e-05!GO:0000139;Golgi membrane;1.38082987074809e-05!GO:0031324;negative regulation of cellular metabolic process;1.38423144808629e-05!GO:0031968;organelle outer membrane;1.3948556910277e-05!GO:0045454;cell redox homeostasis;1.3948556910277e-05!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;1.43331480561652e-05!GO:0019843;rRNA binding;1.46161900390187e-05!GO:0000245;spliceosome assembly;1.49864077148636e-05!GO:0015630;microtubule cytoskeleton;1.52115923187643e-05!GO:0032446;protein modification by small protein conjugation;1.58730230234523e-05!GO:0006091;generation of precursor metabolites and energy;1.60646798976e-05!GO:0051170;nuclear import;2.09740530479655e-05!GO:0019867;outer membrane;2.13144397244612e-05!GO:0044262;cellular carbohydrate metabolic process;2.15173590607429e-05!GO:0051028;mRNA transport;2.18607897050188e-05!GO:0005762;mitochondrial large ribosomal subunit;2.18743065033719e-05!GO:0000315;organellar large ribosomal subunit;2.18743065033719e-05!GO:0030036;actin cytoskeleton organization and biogenesis;2.45349948728937e-05!GO:0016567;protein ubiquitination;2.5301657026808e-05!GO:0016779;nucleotidyltransferase activity;2.9939494158139e-05!GO:0016787;hydrolase activity;3.38596875626723e-05!GO:0000151;ubiquitin ligase complex;3.39004213924733e-05!GO:0005770;late endosome;3.74538938641986e-05!GO:0000314;organellar small ribosomal subunit;3.75966988986145e-05!GO:0005763;mitochondrial small ribosomal subunit;3.75966988986145e-05!GO:0030867;rough endoplasmic reticulum membrane;4.26866566258785e-05!GO:0031202;RNA splicing factor activity, transesterification mechanism;4.57354873208605e-05!GO:0006606;protein import into nucleus;4.61234069804598e-05!GO:0000786;nucleosome;5.12931430289732e-05!GO:0051329;interphase of mitotic cell cycle;5.23775178576231e-05!GO:0005741;mitochondrial outer membrane;6.05392754109248e-05!GO:0000323;lytic vacuole;7.96695455448471e-05!GO:0005764;lysosome;7.96695455448471e-05!GO:0007249;I-kappaB kinase/NF-kappaB cascade;8.22151667994848e-05!GO:0003724;RNA helicase activity;8.37787354227559e-05!GO:0005852;eukaryotic translation initiation factor 3 complex;9.27010909492016e-05!GO:0030029;actin filament-based process;9.40577711984021e-05!GO:0006612;protein targeting to membrane;0.000101082240106517!GO:0043021;ribonucleoprotein binding;0.000102419997766773!GO:0005769;early endosome;0.000113247451203564!GO:0009892;negative regulation of metabolic process;0.00011538056931097!GO:0008610;lipid biosynthetic process;0.000117621081111065!GO:0030133;transport vesicle;0.000127684691727941!GO:0050789;regulation of biological process;0.000127966341573025!GO:0051325;interphase;0.000129790831583304!GO:0005905;coated pit;0.000134748720334868!GO:0007010;cytoskeleton organization and biogenesis;0.000136453794224297!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.000151927768818317!GO:0046474;glycerophospholipid biosynthetic process;0.000153407831584764!GO:0033116;ER-Golgi intermediate compartment membrane;0.000174756877911951!GO:0019899;enzyme binding;0.00017968837239942!GO:0008092;cytoskeletal protein binding;0.000202510001825864!GO:0016044;membrane organization and biogenesis;0.000230489792251075!GO:0051789;response to protein stimulus;0.00023050814603265!GO:0006986;response to unfolded protein;0.00023050814603265!GO:0005791;rough endoplasmic reticulum;0.000233222978648558!GO:0015077;monovalent inorganic cation transmembrane transporter activity;0.000240212344687606!GO:0051427;hormone receptor binding;0.000258532628336404!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000273536788260662!GO:0009165;nucleotide biosynthetic process;0.000279982984630511!GO:0003713;transcription coactivator activity;0.000327025621651509!GO:0005819;spindle;0.000330142437299431!GO:0016563;transcription activator activity;0.000346200708574217!GO:0005885;Arp2/3 protein complex;0.000347471209014574!GO:0030663;COPI coated vesicle membrane;0.000362656433947759!GO:0030126;COPI vesicle coat;0.000362656433947759!GO:0016568;chromatin modification;0.000364952351673869!GO:0048522;positive regulation of cellular process;0.000368106825498105!GO:0008250;oligosaccharyl transferase complex;0.000388221645720343!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00038863586628579!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.000398921939698791!GO:0016126;sterol biosynthetic process;0.00040252263670884!GO:0046467;membrane lipid biosynthetic process;0.000409339984906661!GO:0005813;centrosome;0.000409339984906661!GO:0040008;regulation of growth;0.000411236150547735!GO:0035257;nuclear hormone receptor binding;0.000486411104188756!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.000486411104188756!GO:0051087;chaperone binding;0.000537377828513128!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.0005447841917023!GO:0043681;protein import into mitochondrion;0.000552313733163342!GO:0005048;signal sequence binding;0.000581134968677093!GO:0006626;protein targeting to mitochondrion;0.000592958851153503!GO:0003899;DNA-directed RNA polymerase activity;0.000593391519922647!GO:0004576;oligosaccharyl transferase activity;0.00061035154156629!GO:0006082;organic acid metabolic process;0.000660673722322742!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000698282759567605!GO:0005815;microtubule organizing center;0.000723277020184373!GO:0051920;peroxiredoxin activity;0.000735854630457717!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000740801201276457!GO:0019752;carboxylic acid metabolic process;0.00074100954446569!GO:0008186;RNA-dependent ATPase activity;0.00079673651666303!GO:0018196;peptidyl-asparagine modification;0.000804752497300605!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.000804752497300605!GO:0006839;mitochondrial transport;0.000877078259477912!GO:0016481;negative regulation of transcription;0.000927865809068104!GO:0030137;COPI-coated vesicle;0.000973583507180181!GO:0007050;cell cycle arrest;0.000974226920338912!GO:0042802;identical protein binding;0.00102926293978472!GO:0007051;spindle organization and biogenesis;0.00110578445773664!GO:0030176;integral to endoplasmic reticulum membrane;0.00117030707617696!GO:0007264;small GTPase mediated signal transduction;0.00119354065115053!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00124266015074156!GO:0007006;mitochondrial membrane organization and biogenesis;0.00141070332634239!GO:0046489;phosphoinositide biosynthetic process;0.00159598874565712!GO:0051252;regulation of RNA metabolic process;0.00162440205943494!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00163298601449341!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00163298601449341!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00163298601449341!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00174183531135296!GO:0051045;negative regulation of membrane protein ectodomain proteolysis;0.00181469879207436!GO:0051043;regulation of membrane protein ectodomain proteolysis;0.00181469879207436!GO:0048471;perinuclear region of cytoplasm;0.0018190350745648!GO:0051168;nuclear export;0.00190572363249663!GO:0043284;biopolymer biosynthetic process;0.00191841914709134!GO:0004004;ATP-dependent RNA helicase activity;0.00194099539032878!GO:0030027;lamellipodium;0.00194099539032878!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.0019568208071369!GO:0016706;oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;0.00197779047585695!GO:0043488;regulation of mRNA stability;0.00197813355971763!GO:0043487;regulation of RNA stability;0.00197813355971763!GO:0048500;signal recognition particle;0.00205133819716241!GO:0030041;actin filament polymerization;0.0023084792232316!GO:0003690;double-stranded DNA binding;0.00231303804510761!GO:0031072;heat shock protein binding;0.00249341234303974!GO:0003729;mRNA binding;0.00253929785385683!GO:0016363;nuclear matrix;0.00258843475793055!GO:0006509;membrane protein ectodomain proteolysis;0.00258843475793055!GO:0033619;membrane protein proteolysis;0.00258843475793055!GO:0006414;translational elongation;0.00259723738348022!GO:0048487;beta-tubulin binding;0.00289749961377705!GO:0006695;cholesterol biosynthetic process;0.00289749961377705!GO:0007243;protein kinase cascade;0.00293181502128351!GO:0008180;signalosome;0.00297926595659605!GO:0006383;transcription from RNA polymerase III promoter;0.00300775733233433!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.00309879518477545!GO:0030134;ER to Golgi transport vesicle;0.00311827037719728!GO:0006650;glycerophospholipid metabolic process;0.00327366297553648!GO:0044452;nucleolar part;0.0033211482493728!GO:0031418;L-ascorbic acid binding;0.00346980477555088!GO:0006740;NADPH regeneration;0.00350728268918816!GO:0006098;pentose-phosphate shunt;0.00350728268918816!GO:0030658;transport vesicle membrane;0.00352050787059037!GO:0016860;intramolecular oxidoreductase activity;0.00367858917548345!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.00369011353341213!GO:0030659;cytoplasmic vesicle membrane;0.00391787412889214!GO:0006891;intra-Golgi vesicle-mediated transport;0.00398114940041523!GO:0006950;response to stress;0.004050124021223!GO:0000049;tRNA binding;0.00405567157056965!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00425184669365825!GO:0015002;heme-copper terminal oxidase activity;0.00425184669365825!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00425184669365825!GO:0004129;cytochrome-c oxidase activity;0.00425184669365825!GO:0031543;peptidyl-proline dioxygenase activity;0.00442806821876802!GO:0004177;aminopeptidase activity;0.00446017146127869!GO:0015631;tubulin binding;0.00446876296411706!GO:0008033;tRNA processing;0.00448636748068329!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00460003652812685!GO:0045047;protein targeting to ER;0.00460003652812685!GO:0051101;regulation of DNA binding;0.00473133385711549!GO:0016197;endosome transport;0.00497063485630368!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.00498251740008511!GO:0065009;regulation of a molecular function;0.00499603496374823!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00513832095479384!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.00529894742488155!GO:0035258;steroid hormone receptor binding;0.00540770158765383!GO:0030118;clathrin coat;0.00547090902740062!GO:0030521;androgen receptor signaling pathway;0.00551035379898685!GO:0000082;G1/S transition of mitotic cell cycle;0.00553341396960829!GO:0008312;7S RNA binding;0.00553429010315141!GO:0008652;amino acid biosynthetic process;0.00553429010315141!GO:0006007;glucose catabolic process;0.00562862340003049!GO:0008632;apoptotic program;0.00563488202561483!GO:0030132;clathrin coat of coated pit;0.00588857527788642!GO:0000059;protein import into nucleus, docking;0.00596166053372837!GO:0017166;vinculin binding;0.00597436388580834!GO:0030127;COPII vesicle coat;0.00614601897620584!GO:0012507;ER to Golgi transport vesicle membrane;0.00614601897620584!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.00618571552440287!GO:0031901;early endosome membrane;0.00645675100833806!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.00646260875423494!GO:0051287;NAD binding;0.00649554745640366!GO:0006979;response to oxidative stress;0.00662738199285699!GO:0006520;amino acid metabolic process;0.0070316197999869!GO:0005684;U2-dependent spliceosome;0.00747764479950008!GO:0003711;transcription elongation regulator activity;0.007541424561174!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00756519391741!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00756519391741!GO:0030880;RNA polymerase complex;0.00767237719540873!GO:0030384;phosphoinositide metabolic process;0.00773612366233142!GO:0044433;cytoplasmic vesicle part;0.00773612366233142!GO:0045792;negative regulation of cell size;0.00796946906458213!GO:0046483;heterocycle metabolic process;0.00802517010537155!GO:0005869;dynactin complex;0.00818401357970834!GO:0030308;negative regulation of cell growth;0.00825885046417636!GO:0000096;sulfur amino acid metabolic process;0.00839405763021004!GO:0030660;Golgi-associated vesicle membrane;0.00857490004386!GO:0008139;nuclear localization sequence binding;0.00861096387940043!GO:0006720;isoprenoid metabolic process;0.00889403976153527!GO:0006402;mRNA catabolic process;0.00909310027414124!GO:0001726;ruffle;0.0092498894995504!GO:0048468;cell development;0.00942677704053932!GO:0006739;NADP metabolic process;0.00942677704053932!GO:0019798;procollagen-proline dioxygenase activity;0.00946636464061963!GO:0048518;positive regulation of biological process;0.00982284950441779!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.00987116543807231!GO:0015399;primary active transmembrane transporter activity;0.00987116543807231!GO:0005637;nuclear inner membrane;0.010033585957202!GO:0006897;endocytosis;0.010190102954293!GO:0010324;membrane invagination;0.010190102954293!GO:0005862;muscle thin filament tropomyosin;0.010427172949098!GO:0008320;protein transmembrane transporter activity;0.0104571396263809!GO:0031124;mRNA 3'-end processing;0.0104760806656298!GO:0012506;vesicle membrane;0.0104896085393198!GO:0003746;translation elongation factor activity;0.0106040649200644!GO:0006066;alcohol metabolic process;0.0106873769661402!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0107530873410461!GO:0019318;hexose metabolic process;0.0110645852307766!GO:0051098;regulation of binding;0.0113102733488703!GO:0016272;prefoldin complex;0.011386352093056!GO:0051270;regulation of cell motility;0.0116711651134976!GO:0030833;regulation of actin filament polymerization;0.0117859800714634!GO:0016408;C-acyltransferase activity;0.0117943453662517!GO:0001666;response to hypoxia;0.0121032087376972!GO:0051128;regulation of cellular component organization and biogenesis;0.012157991003211!GO:0008154;actin polymerization and/or depolymerization;0.012157991003211!GO:0006595;polyamine metabolic process;0.012168336988776!GO:0006144;purine base metabolic process;0.012168336988776!GO:0043022;ribosome binding;0.0123528663267319!GO:0050662;coenzyme binding;0.0124149394864306!GO:0006401;RNA catabolic process;0.012578482430838!GO:0065007;biological regulation;0.012578482430838!GO:0003756;protein disulfide isomerase activity;0.0130512203882159!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0130512203882159!GO:0033673;negative regulation of kinase activity;0.013204235871169!GO:0006469;negative regulation of protein kinase activity;0.013204235871169!GO:0005996;monosaccharide metabolic process;0.0133821507641874!GO:0005832;chaperonin-containing T-complex;0.0138886998633131!GO:0045892;negative regulation of transcription, DNA-dependent;0.0142598264716463!GO:0000339;RNA cap binding;0.014415476713494!GO:0005975;carbohydrate metabolic process;0.0145762206851419!GO:0051540;metal cluster binding;0.0150250322803064!GO:0051536;iron-sulfur cluster binding;0.0150250322803064!GO:0006261;DNA-dependent DNA replication;0.0155981613557414!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.0156760928519423!GO:0000428;DNA-directed RNA polymerase complex;0.0156760928519423!GO:0007040;lysosome organization and biogenesis;0.0157181885319254!GO:0017015;regulation of transforming growth factor beta receptor signaling pathway;0.0158666551656233!GO:0030145;manganese ion binding;0.0160209990626126!GO:0031272;regulation of pseudopodium formation;0.0170381523030614!GO:0031269;pseudopodium formation;0.0170381523030614!GO:0031344;regulation of cell projection organization and biogenesis;0.0170381523030614!GO:0031268;pseudopodium organization and biogenesis;0.0170381523030614!GO:0031346;positive regulation of cell projection organization and biogenesis;0.0170381523030614!GO:0031274;positive regulation of pseudopodium formation;0.0170381523030614!GO:0006643;membrane lipid metabolic process;0.0176455028657237!GO:0000075;cell cycle checkpoint;0.0178698802691495!GO:0015992;proton transport;0.0179087619949882!GO:0006302;double-strand break repair;0.0179677200580885!GO:0006352;transcription initiation;0.0179821746439911!GO:0031902;late endosome membrane;0.0184633495046285!GO:0006417;regulation of translation;0.0185558117608498!GO:0006818;hydrogen transport;0.0187750778809398!GO:0006506;GPI anchor biosynthetic process;0.0187826826999542!GO:0007052;mitotic spindle organization and biogenesis;0.0187985003646242!GO:0009112;nucleobase metabolic process;0.0188501736675918!GO:0031123;RNA 3'-end processing;0.019116381210112!GO:0006518;peptide metabolic process;0.0191790046943914!GO:0008637;apoptotic mitochondrial changes;0.0192114640987812!GO:0000776;kinetochore;0.0197122970333934!GO:0006497;protein amino acid lipidation;0.0198702817072524!GO:0032984;macromolecular complex disassembly;0.0199194203849285!GO:0051348;negative regulation of transferase activity;0.0199975219773232!GO:0016125;sterol metabolic process;0.0210658129667955!GO:0050681;androgen receptor binding;0.0213253184997138!GO:0044255;cellular lipid metabolic process;0.0214035418676187!GO:0042158;lipoprotein biosynthetic process;0.0218575753779684!GO:0006505;GPI anchor metabolic process;0.0219096374056452!GO:0006778;porphyrin metabolic process;0.0220720371422166!GO:0033013;tetrapyrrole metabolic process;0.0220720371422166!GO:0051539;4 iron, 4 sulfur cluster binding;0.0221272179761241!GO:0007033;vacuole organization and biogenesis;0.0221897427820863!GO:0045045;secretory pathway;0.0225777660544083!GO:0008047;enzyme activator activity;0.0229501233041803!GO:0030119;AP-type membrane coat adaptor complex;0.0236521933789452!GO:0000775;chromosome, pericentric region;0.0243312777094166!GO:0008147;structural constituent of bone;0.0244419307622408!GO:0003684;damaged DNA binding;0.0246447057618862!GO:0031529;ruffle organization and biogenesis;0.0247079136394002!GO:0043433;negative regulation of transcription factor activity;0.0247415949035514!GO:0009303;rRNA transcription;0.0247415949035514!GO:0005801;cis-Golgi network;0.025217664614341!GO:0009967;positive regulation of signal transduction;0.0252799351640395!GO:0005657;replication fork;0.0256694100807531!GO:0016251;general RNA polymerase II transcription factor activity;0.0257551741727627!GO:0031301;integral to organelle membrane;0.0262488674614283!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.0263698728696248!GO:0030032;lamellipodium biogenesis;0.0266277079316192!GO:0016584;nucleosome positioning;0.0269098446285618!GO:0033559;unsaturated fatty acid metabolic process;0.0269098446285618!GO:0006636;unsaturated fatty acid biosynthetic process;0.0269098446285618!GO:0008094;DNA-dependent ATPase activity;0.0270291197943221!GO:0006405;RNA export from nucleus;0.0277970221240567!GO:0007021;tubulin folding;0.0281156694820978!GO:0030518;steroid hormone receptor signaling pathway;0.0282514116274897!GO:0005581;collagen;0.0286805733469557!GO:0022890;inorganic cation transmembrane transporter activity;0.0288114362071281!GO:0030865;cortical cytoskeleton organization and biogenesis;0.0295469624629113!GO:0031227;intrinsic to endoplasmic reticulum membrane;0.0297163261957817!GO:0005586;collagen type III;0.029760002056613!GO:0006892;post-Golgi vesicle-mediated transport;0.0300239051795689!GO:0006611;protein export from nucleus;0.0302843276289396!GO:0005100;Rho GTPase activator activity;0.0302843276289396!GO:0003678;DNA helicase activity;0.0316311929481786!GO:0022884;macromolecule transmembrane transporter activity;0.0316448049276657!GO:0015450;P-P-bond-hydrolysis-driven protein transmembrane transporter activity;0.0316448049276657!GO:0031625;ubiquitin protein ligase binding;0.0319692847286821!GO:0015036;disulfide oxidoreductase activity;0.0319692847286821!GO:0030125;clathrin vesicle coat;0.0319692847286821!GO:0030665;clathrin coated vesicle membrane;0.0319692847286821!GO:0004656;procollagen-proline 4-dioxygenase activity;0.0319843770881311!GO:0031545;peptidyl-proline 4-dioxygenase activity;0.0319843770881311!GO:0006289;nucleotide-excision repair;0.0320713638405223!GO:0031970;organelle envelope lumen;0.0322241585393973!GO:0040011;locomotion;0.032331288252629!GO:0006378;mRNA polyadenylation;0.0325159334730175!GO:0006118;electron transport;0.0325848255312406!GO:0016407;acetyltransferase activity;0.032629548112369!GO:0043241;protein complex disassembly;0.0327728050990507!GO:0051493;regulation of cytoskeleton organization and biogenesis;0.0330564467214217!GO:0033043;regulation of organelle organization and biogenesis;0.0330564467214217!GO:0008097;5S rRNA binding;0.0331988120138837!GO:0005774;vacuolar membrane;0.0332372956438811!GO:0045185;maintenance of protein localization;0.0335828204287031!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.0335828204287031!GO:0008538;proteasome activator activity;0.0338100728977702!GO:0045941;positive regulation of transcription;0.0338977021222294!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.033953211541426!GO:0051235;maintenance of localization;0.0343773872714407!GO:0003779;actin binding;0.0350241084963403!GO:0050811;GABA receptor binding;0.0350477459105802!GO:0006807;nitrogen compound metabolic process;0.0350477459105802!GO:0005850;eukaryotic translation initiation factor 2 complex;0.0352218648835224!GO:0006779;porphyrin biosynthetic process;0.0352218648835224!GO:0033014;tetrapyrrole biosynthetic process;0.0352218648835224!GO:0045893;positive regulation of transcription, DNA-dependent;0.0352755035923775!GO:0031371;ubiquitin conjugating enzyme complex;0.035353516255678!GO:0047485;protein N-terminus binding;0.035353516255678!GO:0007034;vacuolar transport;0.0355144861125384!GO:0005784;translocon complex;0.0358580031163435!GO:0004448;isocitrate dehydrogenase activity;0.0359412146846889!GO:0003682;chromatin binding;0.0362932184444434!GO:0000209;protein polyubiquitination;0.0363640676954123!GO:0035035;histone acetyltransferase binding;0.036791880268404!GO:0009081;branched chain family amino acid metabolic process;0.0368696365458974!GO:0003923;GPI-anchor transamidase activity;0.0371020764431594!GO:0016255;attachment of GPI anchor to protein;0.0371020764431594!GO:0042765;GPI-anchor transamidase complex;0.0371020764431594!GO:0046365;monosaccharide catabolic process;0.037760849648843!GO:0005583;fibrillar collagen;0.0379943696638828!GO:0005092;GDP-dissociation inhibitor activity;0.0385169400101772!GO:0001725;stress fiber;0.0385189658235455!GO:0032432;actin filament bundle;0.0385189658235455!GO:0000097;sulfur amino acid biosynthetic process;0.0385507823665362!GO:0005874;microtubule;0.0385936339366638!GO:0008022;protein C-terminus binding;0.0387381730046945!GO:0008283;cell proliferation;0.0389875519817931!GO:0030131;clathrin adaptor complex;0.0392683010035862!GO:0005758;mitochondrial intermembrane space;0.0393546297659869!GO:0006354;RNA elongation;0.0394515299113316!GO:0040012;regulation of locomotion;0.0396052340431043!GO:0032507;maintenance of cellular protein localization;0.0396052340431043!GO:0009116;nucleoside metabolic process;0.0399545152825673!GO:0048037;cofactor binding;0.0399972256460746!GO:0007179;transforming growth factor beta receptor signaling pathway;0.0399984003063816!GO:0043065;positive regulation of apoptosis;0.0404254952744279!GO:0006790;sulfur metabolic process;0.0405608980400885!GO:0008234;cysteine-type peptidase activity;0.0412643484761421!GO:0008475;procollagen-lysine 5-dioxygenase activity;0.0420132894564338!GO:0030508;thiol-disulfide exchange intermediate activity;0.0424003170389516!GO:0045926;negative regulation of growth;0.0426345361328728!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0435305399925291!GO:0000902;cell morphogenesis;0.043568545772029!GO:0032989;cellular structure morphogenesis;0.043568545772029!GO:0019222;regulation of metabolic process;0.0439910389775042!GO:0042168;heme metabolic process;0.0441938605208509!GO:0030433;ER-associated protein catabolic process;0.0442746586253064!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.0442746586253064!GO:0008168;methyltransferase activity;0.0443171650722211!GO:0030100;regulation of endocytosis;0.0446064316540315!GO:0006769;nicotinamide metabolic process;0.0447068601183161!GO:0005669;transcription factor TFIID complex;0.045136982600628!GO:0043068;positive regulation of programmed cell death;0.0454168928572229!GO:0009308;amine metabolic process;0.0461853327718779!GO:0009889;regulation of biosynthetic process;0.0462223098222503!GO:0006096;glycolysis;0.0466477123436113!GO:0009003;signal peptidase activity;0.0471727528409067!GO:0050178;phenylpyruvate tautomerase activity;0.0474296275201253!GO:0006220;pyrimidine nucleotide metabolic process;0.0475100617255237!GO:0006644;phospholipid metabolic process;0.0478453257396678!GO:0048144;fibroblast proliferation;0.0478677526803351!GO:0048145;regulation of fibroblast proliferation;0.0478677526803351!GO:0043624;cellular protein complex disassembly;0.0478680238124653!GO:0030911;TPR domain binding;0.0485627256962778!GO:0022411;cellular component disassembly;0.0486593947616806!GO:0006607;NLS-bearing substrate import into nucleus;0.0497231421026763!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0498491313416318
|sample_id=11686
|sample_id=11686
|sample_note=
|sample_note=
Line 75: Line 100:
|sample_tissue=heart
|sample_tissue=heart
|top_motifs=HIF1A:2.23764739609;HOX{A5,B5}:1.45841350037;TFAP4:1.39019422915;IKZF1:1.35746156547;NKX3-1:1.2525265895;MYBL2:1.12949103599;TLX1..3_NFIC{dimer}:1.11059038874;TEAD1:1.03645375579;EN1,2:1.01988538455;SRF:0.99707103709;TAL1_TCF{3,4,12}:0.97549449266;GLI1..3:0.964667518831;ZNF238:0.865746097967;HMGA1,2:0.81645923242;NR3C1:0.81366560545;RXRA_VDR{dimer}:0.803881700575;EBF1:0.791527816904;HSF1,2:0.778382128741;SOX17:0.766550645124;ZNF423:0.765621329105;GTF2A1,2:0.755121265229;LHX3,4:0.750247040806;TBP:0.739354277998;GCM1,2:0.732934086647;NFATC1..3:0.695296166325;XBP1:0.68250814845;NANOG:0.662210001451;FOX{I1,J2}:0.65808916238;NR5A1,2:0.61587799882;ZNF148:0.604462277278;GATA6:0.600590350038;PAX5:0.572698485835;SMAD1..7,9:0.571134437196;HES1:0.570210122205;MAZ:0.543643456364;GTF2I:0.539087081276;XCPE1{core}:0.533263277817;CRX:0.529684251766;MTE{core}:0.528153856433;PPARG:0.523129333256;PATZ1:0.522568165372;ZNF384:0.506499287451;HAND1,2:0.499115875137;ALX4:0.495088557412;FOXM1:0.470044474488;FOXL1:0.466139702386;AR:0.427636689457;ADNP_IRX_SIX_ZHX:0.422119895731;SOX5:0.410007472592;ZIC1..3:0.409919585959;FOXA2:0.399198660215;PAX6:0.383085635077;NR6A1:0.378500602018;RXR{A,B,G}:0.377404827827;NKX2-2,8:0.374077382887;TEF:0.359189709118;MAFB:0.34123468125;GFI1B:0.337051653359;ESRRA:0.328433153125;CEBPA,B_DDIT3:0.319691102332;LEF1_TCF7_TCF7L1,2:0.310576137325;TP53:0.284878222833;TBX4,5:0.284471293658;PAX1,9:0.276750274742;POU5F1:0.269822552624;SPZ1:0.267106531284;CDC5L:0.26332674959;NFY{A,B,C}:0.251232985999;UFEwm:0.248130052843;MEF2{A,B,C,D}:0.242417645296;SP1:0.231413234531;STAT5{A,B}:0.231342942145;NFE2L1:0.229497240083;NKX3-2:0.184179952626;NFIX:0.183567666179;HNF1A:0.174030864222;HIC1:0.171239428382;REST:0.168782724696;ATF6:0.15854257043;NHLH1,2:0.132391912613;HLF:0.128571341074;EVI1:0.110892359777;HNF4A_NR2F1,2:0.0883266973034;HOX{A6,A7,B6,B7}:0.0879834421477;AHR_ARNT_ARNT2:0.0845245056877;TFCP2:0.0775391388541;SOX{8,9,10}:0.0756100922192;RBPJ:0.0617535678026;PAX8:0.0602182502352;FOX{F1,F2,J1}:0.0564759292458;E2F1..5:0.0466927876936;STAT1,3:0.0407029608607;NKX2-1,4:0.0396558956737;KLF4:0.0391729215237;FOXP3:0.0249808823328;FOXQ1:0.0108884050466;NFE2L2:0.00888703987988;MYFfamily:0.00449435606826;ZNF143:-9.64769813367e-05;PBX1:-0.00304144275191;HMX1:-0.0162657947676;PAX4:-0.0194938422408;NFIL3:-0.0282163533489;MYB:-0.0284483562384;SOX2:-0.0294528101799;STAT2,4,6:-0.0344012714957;TOPORS:-0.0653439481017;GFI1:-0.0683288178303;PRDM1:-0.0741041129867;GZF1:-0.0755579841649;TFAP2B:-0.0989291278052;EGR1..3:-0.0994182718643;AIRE:-0.121008209016;ZFP161:-0.121915854413;CDX1,2,4:-0.123541320512;MZF1:-0.126539410583;NANOG{mouse}:-0.136365212016;TFDP1:-0.165291792987;PRRX1,2:-0.166760901587;ATF2:-0.171617863347;FOS_FOS{B,L1}_JUN{B,D}:-0.171852068863;VSX1,2:-0.187232720627;ZBTB6:-0.198998377072;NFE2:-0.20184527491;JUN:-0.203470962867;HOX{A4,D4}:-0.207194257107;bHLH_family:-0.21584167621;NFKB1_REL_RELA:-0.221480653026;RREB1:-0.222239054941;ELF1,2,4:-0.225587050406;GATA4:-0.228676147827;EP300:-0.231909781084;POU1F1:-0.239147043277;ETS1,2:-0.240942765503;POU3F1..4:-0.241394104808;ALX1:-0.242825937732;ONECUT1,2:-0.251714395801;RFX1:-0.259707289464;FOSL2:-0.260632781173;HBP1_HMGB_SSRP1_UBTF:-0.279569816756;TFAP2{A,C}:-0.285857397033;HOXA9_MEIS1:-0.289469540928;RORA:-0.293559168863;LMO2:-0.298533229805;NR1H4:-0.298747143778;MED-1{core}:-0.304026497117;ELK1,4_GABP{A,B1}:-0.313556154833;PAX3,7:-0.317895535717;SPIB:-0.330563188028;ARID5B:-0.338041691129;OCT4_SOX2{dimer}:-0.34443152254;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.350232819482;NRF1:-0.352409583031;DBP:-0.3564803276;ATF4:-0.361362767341;CUX2:-0.367606362792;IRF1,2:-0.381052511078;BACH2:-0.381509641046;PAX2:-0.398571774;IRF7:-0.400686216229;ESR1:-0.405637321319;FOXD3:-0.420385018296;BREu{core}:-0.429857678848;FOX{D1,D2}:-0.432997264497;MTF1:-0.436771310323;RUNX1..3:-0.44001764712;T:-0.445482396603;SPI1:-0.465392432215;NKX2-3_NKX2-5:-0.552607141544;FOXO1,3,4:-0.554641019496;MYOD1:-0.58452273237;YY1:-0.624218722438;POU2F1..3:-0.625346407575;ZEB1:-0.659708187571;PDX1:-0.662692732641;POU6F1:-0.667679646751;SNAI1..3:-0.678175655755;TGIF1:-0.679704836017;ATF5_CREB3:-0.733291999502;PITX1..3:-0.754442381989;CREB1:-0.812122867557;DMAP1_NCOR{1,2}_SMARC:-0.816379246317;SREBF1,2:-0.835720706824;FOXN1:-0.835863367029;BPTF:-0.906149821106;FOXP1:-0.926651408875;IKZF2:-0.936827634083;ZBTB16:-0.949721726849;NKX6-1,2:-1.04407149895;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-1.07038710708;TLX2:-1.26256448468;RFX2..5_RFXANK_RFXAP:-1.40971450932
|top_motifs=HIF1A:2.23764739609;HOX{A5,B5}:1.45841350037;TFAP4:1.39019422915;IKZF1:1.35746156547;NKX3-1:1.2525265895;MYBL2:1.12949103599;TLX1..3_NFIC{dimer}:1.11059038874;TEAD1:1.03645375579;EN1,2:1.01988538455;SRF:0.99707103709;TAL1_TCF{3,4,12}:0.97549449266;GLI1..3:0.964667518831;ZNF238:0.865746097967;HMGA1,2:0.81645923242;NR3C1:0.81366560545;RXRA_VDR{dimer}:0.803881700575;EBF1:0.791527816904;HSF1,2:0.778382128741;SOX17:0.766550645124;ZNF423:0.765621329105;GTF2A1,2:0.755121265229;LHX3,4:0.750247040806;TBP:0.739354277998;GCM1,2:0.732934086647;NFATC1..3:0.695296166325;XBP1:0.68250814845;NANOG:0.662210001451;FOX{I1,J2}:0.65808916238;NR5A1,2:0.61587799882;ZNF148:0.604462277278;GATA6:0.600590350038;PAX5:0.572698485835;SMAD1..7,9:0.571134437196;HES1:0.570210122205;MAZ:0.543643456364;GTF2I:0.539087081276;XCPE1{core}:0.533263277817;CRX:0.529684251766;MTE{core}:0.528153856433;PPARG:0.523129333256;PATZ1:0.522568165372;ZNF384:0.506499287451;HAND1,2:0.499115875137;ALX4:0.495088557412;FOXM1:0.470044474488;FOXL1:0.466139702386;AR:0.427636689457;ADNP_IRX_SIX_ZHX:0.422119895731;SOX5:0.410007472592;ZIC1..3:0.409919585959;FOXA2:0.399198660215;PAX6:0.383085635077;NR6A1:0.378500602018;RXR{A,B,G}:0.377404827827;NKX2-2,8:0.374077382887;TEF:0.359189709118;MAFB:0.34123468125;GFI1B:0.337051653359;ESRRA:0.328433153125;CEBPA,B_DDIT3:0.319691102332;LEF1_TCF7_TCF7L1,2:0.310576137325;TP53:0.284878222833;TBX4,5:0.284471293658;PAX1,9:0.276750274742;POU5F1:0.269822552624;SPZ1:0.267106531284;CDC5L:0.26332674959;NFY{A,B,C}:0.251232985999;UFEwm:0.248130052843;MEF2{A,B,C,D}:0.242417645296;SP1:0.231413234531;STAT5{A,B}:0.231342942145;NFE2L1:0.229497240083;NKX3-2:0.184179952626;NFIX:0.183567666179;HNF1A:0.174030864222;HIC1:0.171239428382;REST:0.168782724696;ATF6:0.15854257043;NHLH1,2:0.132391912613;HLF:0.128571341074;EVI1:0.110892359777;HNF4A_NR2F1,2:0.0883266973034;HOX{A6,A7,B6,B7}:0.0879834421477;AHR_ARNT_ARNT2:0.0845245056877;TFCP2:0.0775391388541;SOX{8,9,10}:0.0756100922192;RBPJ:0.0617535678026;PAX8:0.0602182502352;FOX{F1,F2,J1}:0.0564759292458;E2F1..5:0.0466927876936;STAT1,3:0.0407029608607;NKX2-1,4:0.0396558956737;KLF4:0.0391729215237;FOXP3:0.0249808823328;FOXQ1:0.0108884050466;NFE2L2:0.00888703987988;MYFfamily:0.00449435606826;ZNF143:-9.64769813367e-05;PBX1:-0.00304144275191;HMX1:-0.0162657947676;PAX4:-0.0194938422408;NFIL3:-0.0282163533489;MYB:-0.0284483562384;SOX2:-0.0294528101799;STAT2,4,6:-0.0344012714957;TOPORS:-0.0653439481017;GFI1:-0.0683288178303;PRDM1:-0.0741041129867;GZF1:-0.0755579841649;TFAP2B:-0.0989291278052;EGR1..3:-0.0994182718643;AIRE:-0.121008209016;ZFP161:-0.121915854413;CDX1,2,4:-0.123541320512;MZF1:-0.126539410583;NANOG{mouse}:-0.136365212016;TFDP1:-0.165291792987;PRRX1,2:-0.166760901587;ATF2:-0.171617863347;FOS_FOS{B,L1}_JUN{B,D}:-0.171852068863;VSX1,2:-0.187232720627;ZBTB6:-0.198998377072;NFE2:-0.20184527491;JUN:-0.203470962867;HOX{A4,D4}:-0.207194257107;bHLH_family:-0.21584167621;NFKB1_REL_RELA:-0.221480653026;RREB1:-0.222239054941;ELF1,2,4:-0.225587050406;GATA4:-0.228676147827;EP300:-0.231909781084;POU1F1:-0.239147043277;ETS1,2:-0.240942765503;POU3F1..4:-0.241394104808;ALX1:-0.242825937732;ONECUT1,2:-0.251714395801;RFX1:-0.259707289464;FOSL2:-0.260632781173;HBP1_HMGB_SSRP1_UBTF:-0.279569816756;TFAP2{A,C}:-0.285857397033;HOXA9_MEIS1:-0.289469540928;RORA:-0.293559168863;LMO2:-0.298533229805;NR1H4:-0.298747143778;MED-1{core}:-0.304026497117;ELK1,4_GABP{A,B1}:-0.313556154833;PAX3,7:-0.317895535717;SPIB:-0.330563188028;ARID5B:-0.338041691129;OCT4_SOX2{dimer}:-0.34443152254;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.350232819482;NRF1:-0.352409583031;DBP:-0.3564803276;ATF4:-0.361362767341;CUX2:-0.367606362792;IRF1,2:-0.381052511078;BACH2:-0.381509641046;PAX2:-0.398571774;IRF7:-0.400686216229;ESR1:-0.405637321319;FOXD3:-0.420385018296;BREu{core}:-0.429857678848;FOX{D1,D2}:-0.432997264497;MTF1:-0.436771310323;RUNX1..3:-0.44001764712;T:-0.445482396603;SPI1:-0.465392432215;NKX2-3_NKX2-5:-0.552607141544;FOXO1,3,4:-0.554641019496;MYOD1:-0.58452273237;YY1:-0.624218722438;POU2F1..3:-0.625346407575;ZEB1:-0.659708187571;PDX1:-0.662692732641;POU6F1:-0.667679646751;SNAI1..3:-0.678175655755;TGIF1:-0.679704836017;ATF5_CREB3:-0.733291999502;PITX1..3:-0.754442381989;CREB1:-0.812122867557;DMAP1_NCOR{1,2}_SMARC:-0.816379246317;SREBF1,2:-0.835720706824;FOXN1:-0.835863367029;BPTF:-0.906149821106;FOXP1:-0.926651408875;IKZF2:-0.936827634083;ZBTB16:-0.949721726849;NKX6-1,2:-1.04407149895;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-1.07038710708;TLX2:-1.26256448468;RFX2..5_RFXANK_RFXAP:-1.40971450932
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11686-122I3;search_select_hide=table117:FF:11686-122I3
}}
}}

Latest revision as of 18:14, 4 June 2020

Name:Cardiac Myocyte, donor3
Species:Human (Homo sapiens)
Library ID:CNhs12571
Sample type:primary cells
Genomic View: UCSC
RefEX:Specific genes
FANTOM CAT:1, 2, 3, 4, 5, 6, 7, 8, 9
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissueheart
dev stageNA
sexNA
ageNA
cell typecardiac muscle cell
cell lineNA
companySciencell/3H
collaborationFANTOM5 OSC CORE (contact: Al Forrest)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot number6755
catalog numberSC6205
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-TRIzol-ethanol-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00005296
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs12571 CAGE DRX008200 DRR009072
Accession ID Hg19

Library idBAMCTSS
CNhs12571 DRZ000497 DRZ001882
Accession ID Hg38

Library idBAMCTSS
CNhs12571 DRZ011847 DRZ013232
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis-0.204
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma0.1
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0.215
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0.425
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural-0.0408
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19-0.197
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle-0.556
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140.0989
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0.117
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed-0.142
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte-0.118
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0.0989
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0.0523
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus0.0923
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory-0.0316
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0.745
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8-0.0574
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth0.631
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small0.0451
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0.0503
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0.0523
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0.179
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0.319
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0.142
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0.404
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0.446
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0.581
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs12571

Jaspar motifP-value
MA0002.20.121
MA0003.10.484
MA0004.10.0411
MA0006.10.196
MA0007.10.0432
MA0009.10.504
MA0014.10.739
MA0017.10.948
MA0018.24.32127e-5
MA0019.10.937
MA0024.10.879
MA0025.10.363
MA0027.10.928
MA0028.10.061
MA0029.10.354
MA0030.10.172
MA0031.10.268
MA0035.20.00459
MA0038.10.769
MA0039.20.406
MA0040.10.319
MA0041.10.3
MA0042.10.258
MA0043.10.102
MA0046.10.92
MA0047.20.81
MA0048.10.627
MA0050.14.30599e-4
MA0051.10.794
MA0052.10.613
MA0055.10.654
MA0057.10.317
MA0058.10.00207
MA0059.10.453
MA0060.10.0873
MA0061.10.0837
MA0062.21.2285e-7
MA0065.20.476
MA0066.10.326
MA0067.10.00461
MA0068.10.731
MA0069.10.913
MA0070.10.682
MA0071.10.606
MA0072.10.965
MA0073.10.992
MA0074.10.879
MA0076.10.00139
MA0077.10.39
MA0078.10.108
MA0079.20.914
MA0080.28.16256e-7
MA0081.10.0574
MA0083.10.00676
MA0084.10.128
MA0087.10.174
MA0088.10.647
MA0090.12.61168e-7
MA0091.10.0903
MA0092.10.00975
MA0093.10.0419
MA0099.20.00488
MA0100.10.533
MA0101.10.241
MA0102.20.471
MA0103.10.00179
MA0104.20.128
MA0105.10.0795
MA0106.10.593
MA0107.10.235
MA0108.24.35098e-12
MA0111.10.333
MA0112.20.228
MA0113.10.0375
MA0114.10.718
MA0115.10.0598
MA0116.10.966
MA0117.10.345
MA0119.10.119
MA0122.10.529
MA0124.10.226
MA0125.10.648
MA0131.10.432
MA0135.10.255
MA0136.12.30798e-8
MA0137.20.33
MA0138.20.316
MA0139.10.41
MA0140.19.19531e-4
MA0141.10.255
MA0142.10.355
MA0143.10.467
MA0144.10.175
MA0145.10.192
MA0146.10.696
MA0147.10.242
MA0148.10.847
MA0149.10.556
MA0150.10.0285
MA0152.10.0246
MA0153.10.712
MA0154.10.865
MA0155.10.537
MA0156.15.40785e-5
MA0157.10.705
MA0159.10.69
MA0160.10.77
MA0162.10.151
MA0163.10.836
MA0164.10.173
MA0258.10.825
MA0259.10.366



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs12571

Novel motifP-value
10.584
100.00917
1000.859
1010.751
1020.165
1030.433
1040.298
1050.596
1060.4
1070.0433
1080.622
1090.855
110.887
1100.949
1110.0378
1120.467
1130.0782
1140.406
1150.815
1160.264
1170.0122
1180.801
1190.682
120.693
1200.59
1210.777
1220.964
1232.43847e-4
1240.985
1250.519
1260.859
1270.775
1280.304
1290.722
130.584
1300.0397
1310.183
1320.343
1330.933
1340.118
1350.138
1360.695
1370.162
1380.144
1390.0691
140.254
1400.267
1410.876
1420.872
1430.623
1440.769
1450.899
1460.0945
1470.437
1480.43
1490.00471
150.963
1500.15
1510.596
1520.128
1530.651
1540.0839
1550.0183
1560.806
1570.533
1587.41707e-4
1590.296
160.175
1600.0982
1610.854
1620.933
1630.448
1640.94
1650.0523
1660.116
1670.092
1680.461
1690.148
170.932
180.24
190.0857
20.24
200.329
210.693
220.383
230.587
240.793
250.207
260.75
270.655
280.199
290.603
30.837
300.114
310.419
321.67756e-9
330.505
340.312
350.208
360.468
370.848
380.527
390.124
40.649
400.615
410.831
420.699
430.679
440.943
450.348
460.839
470.662
480.977
490.725
50.424
500.424
510.873
520.624
530.373
540.991
550.465
560.811
570.553
580.264
590.37
60.773
600.651
610.681
620.436
630.624
640.742
650.811
660.347
670.562
680.842
690.957
70.871
700.274
710.324
720.844
730.277
740.665
750.471
760.108
770.102
780.573
790.196
80.225
800.399
810.363
820.223
830.0685
840.293
850.182
860.27
870.0812
880.482
890.135
90.711
900.716
910.861
920.493
930.534
940.849
950.883
960.51
970.398
980.15
990.00419



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs12571


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0002371 (somatic cell)
0000393 (electrically responsive cell)
0000183 (contractile cell)
0000187 (muscle cell)
0000211 (electrically active cell)
0000255 (eukaryotic cell)
0002494 (cardiocyte)
0000737 (striated muscle cell)
0000746 (cardiac muscle cell)

UBERON: Anatomy
0000468 (multi-cellular organism)
0007100 (primary circulatory organ)
0000948 (heart)
0010314 (structure with developmental contribution from neural crest)
0000062 (organ)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0003103 (compound organ)
0010317 (germ layer / neural crest derived structure)
0004535 (cardiovascular system)
0001009 (circulatory system)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000118 (human cardiac myocyte sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000355 (multi-potent skeletal muscle stem cell)
CL:0000222 (mesodermal cell)
CL:0000513 (cardiac muscle myoblast)

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