FF:10838-111E1: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet= | |DRA_sample_Accession=CAGE@SAMD00004791 | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL: | |DRA_sample_Accession_RNASeq=RNA-Seq@SAMD00004791 | ||
|accession_numbers=CAGE;DRX007928;DRR008800;DRZ000225;DRZ001610;DRZ011575;DRZ012960 | |||
|accession_numbers_RNASeq=RNA-Seq;DRX057146;DRR062905;DRZ007981 | |||
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000955,UBERON:0004121,UBERON:0011216,UBERON:0000062,UBERON:0000061,UBERON:0000465,UBERON:0000477,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0010317,UBERON:0001017,UBERON:0001016 | |||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0002371,CL:0002319,CL:0000095,CL:0000243,CL:0000125,CL:0000255 | |||
|ancestors_in_disease_facet=DOID:4,DOID:0050686,DOID:162,DOID:14566,DOID:3093 | |||
|ancestors_in_ff_facet=FF:0000102,FF:0000003,FF:0000210,FF:0000101,FF:0000001,FF:0100711,FF:0100255,FF:0100690,FF:0101531,FF:0101359 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score | |||
|fonse_cell_line=FF:0100255 | |fonse_cell_line=FF:0100255 | ||
|fonse_cell_line_closure=FF:0100255 | |fonse_cell_line_closure=FF:0100255 | ||
| Line 35: | Line 43: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/medulloblastoma%2520cell%2520line%253aD283%2520Med.CNhs12805.10838-111E1.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/medulloblastoma%2520cell%2520line%253aD283%2520Med.CNhs12805.10838-111E1.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/medulloblastoma%2520cell%2520line%253aD283%2520Med.CNhs12805.10838-111E1.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.cell_line.hCAGE/medulloblastoma%2520cell%2520line%253aD283%2520Med.CNhs12805.10838-111E1.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.cell_line.hCAGE/medulloblastoma%2520cell%2520line%253aD283%2520Med.CNhs12805.10838-111E1.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:10838-111E1 | |id=FF:10838-111E1 | ||
|is_a=EFO:0002091;;FF: | |is_a=EFO:0002091;;FF:0000210;;FF:0101359 | ||
|is_obsolete= | |||
|library_id=CNhs12805 | |||
|library_id_phase_based=2:CNhs12805 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;10838 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10838 | |||
|name=medulloblastoma cell line:D283 Med | |name=medulloblastoma cell line:D283 Med | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
| Line 42: | Line 62: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs12805,LSID972,release012,COMPLETED | |profile_hcage=CNhs12805,LSID972,release012,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=,,, | |profile_srnaseq=,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
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|rna_box=111 | |rna_box=111 | ||
|rna_catalog_number= | |rna_catalog_number= | ||
| Line 54: | Line 77: | ||
|rna_rin= | |rna_rin= | ||
|rna_sample_type=total RNA | |rna_sample_type=total RNA | ||
|rna_tube_id= | |rna_tube_id=1.11E+03 | ||
|rna_weight_ug=92.0381 | |rna_weight_ug=92.0381 | ||
|rnaseq_library_id=RDhi10089 | |||
|sample_age=6 | |sample_age=6 | ||
|sample_category=cell lines | |||
|sample_cell_catalog=HTB185 | |sample_cell_catalog=HTB185 | ||
|sample_cell_line=D283 Med | |sample_cell_line=D283 Med | ||
| Line 69: | Line 94: | ||
|sample_ethnicity=C | |sample_ethnicity=C | ||
|sample_experimental_condition= | |sample_experimental_condition= | ||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;6.35612655664328e-293!GO:0043231;intracellular membrane-bound organelle;2.4705354756463e-259!GO:0043227;membrane-bound organelle;3.9053591538467e-259!GO:0043226;organelle;3.9053591538467e-259!GO:0043229;intracellular organelle;1.26159028456311e-258!GO:0005634;nucleus;1.12813548674313e-155!GO:0044422;organelle part;6.56260905561296e-150!GO:0044446;intracellular organelle part;9.40072947853222e-149!GO:0005737;cytoplasm;1.66234551269932e-145!GO:0044237;cellular metabolic process;2.24232815840722e-116!GO:0044238;primary metabolic process;5.27023466587864e-116!GO:0043170;macromolecule metabolic process;3.80402524346133e-114!GO:0032991;macromolecular complex;3.53839805886899e-109!GO:0030529;ribonucleoprotein complex;5.40853559304395e-99!GO:0044444;cytoplasmic part;4.09511039176944e-97!GO:0003723;RNA binding;8.91631265490428e-97!GO:0044428;nuclear part;5.48302156317364e-96!GO:0010467;gene expression;4.25622764175784e-90!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;8.55736919206924e-90!GO:0043283;biopolymer metabolic process;9.22992521733856e-90!GO:0043233;organelle lumen;3.90415732295641e-88!GO:0031974;membrane-enclosed lumen;3.90415732295641e-88!GO:0003676;nucleic acid binding;3.29915960841876e-72!GO:0006396;RNA processing;8.73095501350316e-66!GO:0005515;protein binding;1.42252909161694e-63!GO:0031981;nuclear lumen;2.50595812709592e-61!GO:0016070;RNA metabolic process;1.85742776569003e-56!GO:0005739;mitochondrion;3.35612072498587e-56!GO:0016043;cellular component organization and biogenesis;1.55661635348289e-54!GO:0005840;ribosome;1.21960062159061e-53!GO:0043234;protein complex;8.14107054764406e-53!GO:0016071;mRNA metabolic process;2.85857217919011e-51!GO:0006412;translation;7.10994676910654e-51!GO:0006259;DNA metabolic process;4.13926870350528e-48!GO:0008380;RNA splicing;2.6994214565546e-46!GO:0003735;structural constituent of ribosome;3.87353195684961e-45!GO:0006397;mRNA processing;2.93491503218498e-44!GO:0043228;non-membrane-bound organelle;6.44674198639441e-41!GO:0043232;intracellular non-membrane-bound organelle;6.44674198639441e-41!GO:0006996;organelle organization and biogenesis;1.12990325100684e-40!GO:0033279;ribosomal subunit;1.32059909225097e-40!GO:0022613;ribonucleoprotein complex biogenesis and assembly;5.93388400431567e-39!GO:0007049;cell cycle;1.48619962257788e-38!GO:0044249;cellular biosynthetic process;2.13348281395893e-38!GO:0005654;nucleoplasm;5.04673487682818e-38!GO:0033036;macromolecule localization;1.1930700495784e-37!GO:0044429;mitochondrial part;1.7646883147379e-36!GO:0019538;protein metabolic process;2.25565609240963e-36!GO:0031090;organelle membrane;2.83986779458856e-36!GO:0009059;macromolecule biosynthetic process;3.61499121779881e-36!GO:0015031;protein transport;2.39291538613027e-35!GO:0009058;biosynthetic process;3.329392617445e-35!GO:0065003;macromolecular complex assembly;2.10850486929333e-34!GO:0031967;organelle envelope;2.63282030786291e-34!GO:0031975;envelope;3.47818446534409e-34!GO:0046907;intracellular transport;6.51066210862286e-33!GO:0005681;spliceosome;1.11144604923151e-32!GO:0008104;protein localization;2.94341747826869e-32!GO:0044260;cellular macromolecule metabolic process;3.20130049358318e-32!GO:0044267;cellular protein metabolic process;4.33454352339145e-32!GO:0044451;nucleoplasm part;6.32524232918421e-32!GO:0005830;cytosolic ribosome (sensu Eukaryota);6.62789218774238e-32!GO:0022607;cellular component assembly;4.44020162516246e-31!GO:0045184;establishment of protein localization;5.61351827777193e-31!GO:0000166;nucleotide binding;6.39627609853775e-31!GO:0022402;cell cycle process;3.34765175548104e-30!GO:0006974;response to DNA damage stimulus;4.48085948920115e-30!GO:0005829;cytosol;1.74280420684784e-29!GO:0006886;intracellular protein transport;5.36796847631051e-27!GO:0005694;chromosome;1.98803200105846e-26!GO:0006281;DNA repair;2.23384402948713e-26!GO:0000278;mitotic cell cycle;2.28512889881951e-26!GO:0044445;cytosolic part;1.1835656991178e-25!GO:0051276;chromosome organization and biogenesis;1.79597763373479e-24!GO:0016874;ligase activity;2.55189851387518e-24!GO:0051649;establishment of cellular localization;3.10956201311567e-24!GO:0051641;cellular localization;4.78296177556595e-24!GO:0005730;nucleolus;7.16280263219954e-24!GO:0006512;ubiquitin cycle;1.07649152298461e-22!GO:0019866;organelle inner membrane;1.15991454985123e-22!GO:0000087;M phase of mitotic cell cycle;2.35075290058151e-22!GO:0044427;chromosomal part;3.17322520068096e-22!GO:0005740;mitochondrial envelope;4.95345280443816e-22!GO:0007067;mitosis;8.24239151264794e-22!GO:0022618;protein-RNA complex assembly;9.22079454339178e-22!GO:0022403;cell cycle phase;2.1445516407338e-21!GO:0031966;mitochondrial membrane;3.7826987029593e-21!GO:0015935;small ribosomal subunit;9.65582539873452e-21!GO:0019222;regulation of metabolic process;1.45765682535486e-20!GO:0015934;large ribosomal subunit;1.73954791561367e-20!GO:0005743;mitochondrial inner membrane;2.07513308976978e-20!GO:0006457;protein folding;5.13607543842543e-20!GO:0032553;ribonucleotide binding;5.27986688558829e-20!GO:0032555;purine ribonucleotide binding;5.27986688558829e-20!GO:0051301;cell division;5.39068879261449e-20!GO:0016462;pyrophosphatase activity;5.67954800553788e-20!GO:0006260;DNA replication;5.733981130566e-20!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;7.23405984914326e-20!GO:0016817;hydrolase activity, acting on acid anhydrides;8.20893774611424e-20!GO:0017111;nucleoside-triphosphatase activity;1.2749427704479e-19!GO:0006325;establishment and/or maintenance of chromatin architecture;2.14049765522835e-19!GO:0005524;ATP binding;2.30851558739461e-19!GO:0006350;transcription;2.89617600403139e-19!GO:0032559;adenyl ribonucleotide binding;3.10828226659717e-19!GO:0009719;response to endogenous stimulus;3.80205636122911e-19!GO:0000279;M phase;4.16652893906982e-19!GO:0017076;purine nucleotide binding;5.03170058802166e-19!GO:0008134;transcription factor binding;1.18678518113989e-18!GO:0006323;DNA packaging;1.34014689159027e-18!GO:0008135;translation factor activity, nucleic acid binding;1.90537781295026e-18!GO:0031323;regulation of cellular metabolic process;3.10992617980762e-18!GO:0044455;mitochondrial membrane part;5.20495758765612e-18!GO:0030554;adenyl nucleotide binding;5.7931881491391e-18!GO:0042254;ribosome biogenesis and assembly;8.34608815638364e-18!GO:0006119;oxidative phosphorylation;1.00931694099805e-17!GO:0050794;regulation of cellular process;1.77399912160252e-17!GO:0031980;mitochondrial lumen;2.43568782988645e-17!GO:0005759;mitochondrial matrix;2.43568782988645e-17!GO:0010468;regulation of gene expression;3.39379451688558e-17!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);8.63448145704471e-17!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;9.75480866899192e-17!GO:0004386;helicase activity;2.46879283374271e-16!GO:0032774;RNA biosynthetic process;3.40159096542001e-16!GO:0006511;ubiquitin-dependent protein catabolic process;4.08081772737126e-16!GO:0000398;nuclear mRNA splicing, via spliceosome;5.5356461668147e-16!GO:0000375;RNA splicing, via transesterification reactions;5.5356461668147e-16!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;5.5356461668147e-16!GO:0044265;cellular macromolecule catabolic process;5.53985964118233e-16!GO:0006351;transcription, DNA-dependent;5.62862492257037e-16!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);6.56316349651498e-16!GO:0006366;transcription from RNA polymerase II promoter;1.13611028598967e-15!GO:0019941;modification-dependent protein catabolic process;1.17117338671181e-15!GO:0043632;modification-dependent macromolecule catabolic process;1.17117338671181e-15!GO:0051603;proteolysis involved in cellular protein catabolic process;1.28719055745727e-15!GO:0016887;ATPase activity;1.62842340613056e-15!GO:0042623;ATPase activity, coupled;2.54501360546862e-15!GO:0012505;endomembrane system;3.0463187569742e-15!GO:0044257;cellular protein catabolic process;3.69874436832852e-15!GO:0006605;protein targeting;6.23750358378767e-15!GO:0048770;pigment granule;7.39927903953636e-15!GO:0042470;melanosome;7.39927903953636e-15!GO:0045449;regulation of transcription;9.10286774133582e-15!GO:0000074;regulation of progression through cell cycle;1.02151421653504e-14!GO:0003677;DNA binding;1.05513638100438e-14!GO:0051726;regulation of cell cycle;1.19051331400693e-14!GO:0043412;biopolymer modification;2.68922297754141e-14!GO:0031965;nuclear membrane;2.91564859293258e-14!GO:0043285;biopolymer catabolic process;3.11151572018077e-14!GO:0015630;microtubule cytoskeleton;4.13713798255825e-14!GO:0005746;mitochondrial respiratory chain;4.50312486365502e-14!GO:0003743;translation initiation factor activity;7.76498763849713e-14!GO:0006413;translational initiation;1.00871331953003e-13!GO:0044453;nuclear membrane part;1.02680815605285e-13!GO:0016568;chromatin modification;1.25838627323395e-13!GO:0006403;RNA localization;1.3941646245797e-13!GO:0016604;nuclear body;1.43539225875012e-13!GO:0006355;regulation of transcription, DNA-dependent;3.13778758423295e-13!GO:0008026;ATP-dependent helicase activity;3.45334320064646e-13!GO:0006399;tRNA metabolic process;3.96811446715927e-13!GO:0050657;nucleic acid transport;4.03825169170893e-13!GO:0051236;establishment of RNA localization;4.03825169170893e-13!GO:0050658;RNA transport;4.03825169170893e-13!GO:0005635;nuclear envelope;5.29076376898439e-13!GO:0005643;nuclear pore;6.87990669776089e-13!GO:0005761;mitochondrial ribosome;9.83508642980525e-13!GO:0000313;organellar ribosome;9.83508642980525e-13!GO:0051082;unfolded protein binding;1.14866888913373e-12!GO:0050136;NADH dehydrogenase (quinone) activity;1.38324019848267e-12!GO:0003954;NADH dehydrogenase activity;1.38324019848267e-12!GO:0008137;NADH dehydrogenase (ubiquinone) activity;1.38324019848267e-12!GO:0009057;macromolecule catabolic process;1.52669521161161e-12!GO:0050789;regulation of biological process;1.80575486956514e-12!GO:0016607;nuclear speck;3.3261737307054e-12!GO:0003712;transcription cofactor activity;3.95985148948338e-12!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;4.12615727464744e-12!GO:0006364;rRNA processing;4.42453678374373e-12!GO:0006446;regulation of translational initiation;5.67438409866784e-12!GO:0000785;chromatin;5.96860618137334e-12!GO:0030163;protein catabolic process;8.01515537162164e-12!GO:0006913;nucleocytoplasmic transport;8.75074146550338e-12!GO:0006464;protein modification process;9.54397712412234e-12!GO:0016072;rRNA metabolic process;1.24211777025369e-11!GO:0006333;chromatin assembly or disassembly;1.58311692717554e-11!GO:0051169;nuclear transport;2.25941751690558e-11!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;3.12777424450962e-11!GO:0065004;protein-DNA complex assembly;3.13206250305266e-11!GO:0043687;post-translational protein modification;3.19480964358516e-11!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;3.19480964358516e-11!GO:0004812;aminoacyl-tRNA ligase activity;3.19480964358516e-11!GO:0016875;ligase activity, forming carbon-oxygen bonds;3.19480964358516e-11!GO:0008565;protein transporter activity;3.23634929855746e-11!GO:0051028;mRNA transport;4.04629217069723e-11!GO:0016879;ligase activity, forming carbon-nitrogen bonds;4.34422540650495e-11!GO:0042775;organelle ATP synthesis coupled electron transport;5.3303969292488e-11!GO:0042773;ATP synthesis coupled electron transport;5.3303969292488e-11!GO:0044248;cellular catabolic process;6.89155485620495e-11!GO:0043038;amino acid activation;7.10734668504362e-11!GO:0006418;tRNA aminoacylation for protein translation;7.10734668504362e-11!GO:0043039;tRNA aminoacylation;7.10734668504362e-11!GO:0030964;NADH dehydrogenase complex (quinone);9.11353157735741e-11!GO:0045271;respiratory chain complex I;9.11353157735741e-11!GO:0005747;mitochondrial respiratory chain complex I;9.11353157735741e-11!GO:0008639;small protein conjugating enzyme activity;1.09209009784441e-10!GO:0004842;ubiquitin-protein ligase activity;1.62619835193058e-10!GO:0065002;intracellular protein transport across a membrane;1.62837916052671e-10!GO:0000502;proteasome complex (sensu Eukaryota);1.63691930218795e-10!GO:0051186;cofactor metabolic process;1.76408638325846e-10!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;2.09070350147064e-10!GO:0043566;structure-specific DNA binding;2.57506757404936e-10!GO:0005667;transcription factor complex;3.66062433607163e-10!GO:0046930;pore complex;3.81157289197287e-10!GO:0005819;spindle;5.23486836508749e-10!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;7.37218837563332e-10!GO:0044432;endoplasmic reticulum part;7.45195661501711e-10!GO:0019787;small conjugating protein ligase activity;9.74213810592182e-10!GO:0006357;regulation of transcription from RNA polymerase II promoter;1.00729415520446e-09!GO:0006261;DNA-dependent DNA replication;1.23701287690207e-09!GO:0000775;chromosome, pericentric region;2.66526950832644e-09!GO:0003697;single-stranded DNA binding;2.77538210750361e-09!GO:0017038;protein import;3.36974450883344e-09!GO:0030532;small nuclear ribonucleoprotein complex;4.27196945359159e-09!GO:0005783;endoplasmic reticulum;5.24767379262933e-09!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;6.47765668978286e-09!GO:0016881;acid-amino acid ligase activity;6.48191542066598e-09!GO:0006732;coenzyme metabolic process;6.83740320000308e-09!GO:0005794;Golgi apparatus;1.15484828767587e-08!GO:0016192;vesicle-mediated transport;1.9229240408095e-08!GO:0048193;Golgi vesicle transport;1.98274293264413e-08!GO:0032446;protein modification by small protein conjugation;2.18650841446819e-08!GO:0006461;protein complex assembly;2.61859292035245e-08!GO:0006163;purine nucleotide metabolic process;3.44478022292681e-08!GO:0009259;ribonucleotide metabolic process;3.92097450093336e-08!GO:0016567;protein ubiquitination;4.11421997788825e-08!GO:0005813;centrosome;4.21076532009288e-08!GO:0008094;DNA-dependent ATPase activity;4.84043880601478e-08!GO:0007051;spindle organization and biogenesis;7.49760053716088e-08!GO:0000245;spliceosome assembly;7.72722246530625e-08!GO:0006164;purine nucleotide biosynthetic process;9.97758040533567e-08!GO:0005815;microtubule organizing center;1.03621146313762e-07!GO:0045786;negative regulation of progression through cell cycle;1.92592490158693e-07!GO:0016779;nucleotidyltransferase activity;2.5715189431761e-07!GO:0000075;cell cycle checkpoint;2.67431316547879e-07!GO:0009260;ribonucleotide biosynthetic process;2.72014580507297e-07!GO:0009150;purine ribonucleotide metabolic process;2.86701011370917e-07!GO:0031202;RNA splicing factor activity, transesterification mechanism;2.92929290846506e-07!GO:0003682;chromatin binding;3.52229715037837e-07!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;4.17614273774142e-07!GO:0016564;transcription repressor activity;5.09757087138058e-07!GO:0016740;transferase activity;5.49271879027486e-07!GO:0003724;RNA helicase activity;5.6297614706549e-07!GO:0031324;negative regulation of cellular metabolic process;7.03436376656474e-07!GO:0045333;cellular respiration;7.70288816903081e-07!GO:0051329;interphase of mitotic cell cycle;8.42587348621739e-07!GO:0003714;transcription corepressor activity;8.58961180812919e-07!GO:0009152;purine ribonucleotide biosynthetic process;8.64666486153033e-07!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;9.06516742638297e-07!GO:0009060;aerobic respiration;1.35798668695757e-06!GO:0045259;proton-transporting ATP synthase complex;1.41871428079272e-06!GO:0051427;hormone receptor binding;1.49248193643142e-06!GO:0065007;biological regulation;1.51283165434358e-06!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.69487800407188e-06!GO:0005657;replication fork;1.69866472858009e-06!GO:0003713;transcription coactivator activity;1.73994731561864e-06!GO:0000151;ubiquitin ligase complex;1.86500994128945e-06!GO:0031497;chromatin assembly;1.87953119808413e-06!GO:0019829;cation-transporting ATPase activity;1.96183255432014e-06!GO:0003899;DNA-directed RNA polymerase activity;2.07181494796872e-06!GO:0006334;nucleosome assembly;2.14543685650752e-06!GO:0016853;isomerase activity;2.14543685650752e-06!GO:0006606;protein import into nucleus;2.33782307736935e-06!GO:0042175;nuclear envelope-endoplasmic reticulum network;2.49375023777486e-06!GO:0009055;electron carrier activity;2.55361561693768e-06!GO:0051170;nuclear import;2.74876598415749e-06!GO:0015986;ATP synthesis coupled proton transport;3.16509915842306e-06!GO:0015985;energy coupled proton transport, down electrochemical gradient;3.16509915842306e-06!GO:0005789;endoplasmic reticulum membrane;3.42442845626251e-06!GO:0035257;nuclear hormone receptor binding;3.47372806064376e-06!GO:0009141;nucleoside triphosphate metabolic process;3.58465798904237e-06!GO:0051325;interphase;3.67544042908451e-06!GO:0009199;ribonucleoside triphosphate metabolic process;3.79040494241757e-06!GO:0016563;transcription activator activity;4.05466762691934e-06!GO:0051188;cofactor biosynthetic process;4.19763309149255e-06!GO:0016363;nuclear matrix;4.46250015184015e-06!GO:0005793;ER-Golgi intermediate compartment;4.59313092576398e-06!GO:0005874;microtubule;4.78543137329426e-06!GO:0003690;double-stranded DNA binding;5.10920124887268e-06!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;5.36512498841141e-06!GO:0009142;nucleoside triphosphate biosynthetic process;5.83043638786285e-06!GO:0009201;ribonucleoside triphosphate biosynthetic process;5.83043638786285e-06!GO:0007017;microtubule-based process;6.34744663756062e-06!GO:0016481;negative regulation of transcription;6.37510052739559e-06!GO:0006099;tricarboxylic acid cycle;6.58876688579911e-06!GO:0046356;acetyl-CoA catabolic process;6.58876688579911e-06!GO:0005788;endoplasmic reticulum lumen;6.90429161773974e-06!GO:0015631;tubulin binding;7.05326270992478e-06!GO:0009205;purine ribonucleoside triphosphate metabolic process;7.47313837288583e-06!GO:0009144;purine nucleoside triphosphate metabolic process;7.47313837288583e-06!GO:0016772;transferase activity, transferring phosphorus-containing groups;8.82791901198909e-06!GO:0000226;microtubule cytoskeleton organization and biogenesis;8.86012159373345e-06!GO:0009892;negative regulation of metabolic process;9.17909029935495e-06!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;1.19872329016864e-05!GO:0009145;purine nucleoside triphosphate biosynthetic process;1.19872329016864e-05!GO:0051168;nuclear export;1.31867032737161e-05!GO:0000776;kinetochore;1.42958764441363e-05!GO:0007005;mitochondrion organization and biogenesis;1.58895955905638e-05!GO:0006302;double-strand break repair;1.60401744168612e-05!GO:0003729;mRNA binding;1.68052433012869e-05!GO:0006613;cotranslational protein targeting to membrane;1.69053292720049e-05!GO:0043623;cellular protein complex assembly;1.81112500225182e-05!GO:0006383;transcription from RNA polymerase III promoter;1.84178907548795e-05!GO:0006084;acetyl-CoA metabolic process;2.15087211155376e-05!GO:0008270;zinc ion binding;2.15627818325861e-05!GO:0016469;proton-transporting two-sector ATPase complex;2.22656540743505e-05!GO:0046034;ATP metabolic process;2.43585520309712e-05!GO:0031988;membrane-bound vesicle;2.61314894516766e-05!GO:0044452;nucleolar part;2.69050383680167e-05!GO:0003678;DNA helicase activity;2.89648171773084e-05!GO:0009056;catabolic process;2.99463536428936e-05!GO:0007059;chromosome segregation;3.00978177640397e-05!GO:0006752;group transfer coenzyme metabolic process;3.03704007019433e-05!GO:0016023;cytoplasmic membrane-bound vesicle;3.23449262709149e-05!GO:0006754;ATP biosynthetic process;3.31353197768257e-05!GO:0006753;nucleoside phosphate metabolic process;3.31353197768257e-05!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;3.33810249587968e-05!GO:0008186;RNA-dependent ATPase activity;3.88751878100817e-05!GO:0003702;RNA polymerase II transcription factor activity;3.97075275848786e-05!GO:0006310;DNA recombination;4.61817016257249e-05!GO:0003684;damaged DNA binding;4.81441710770635e-05!GO:0009108;coenzyme biosynthetic process;4.99526874784537e-05!GO:0043021;ribonucleoprotein binding;5.31621315011213e-05!GO:0048523;negative regulation of cellular process;5.33229913930433e-05!GO:0015078;hydrogen ion transmembrane transporter activity;5.56280794283756e-05!GO:0004674;protein serine/threonine kinase activity;7.07972039016277e-05!GO:0048475;coated membrane;7.94228194784997e-05!GO:0030117;membrane coat;7.94228194784997e-05!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;8.54031830267022e-05!GO:0008168;methyltransferase activity;8.74370323085519e-05!GO:0016741;transferase activity, transferring one-carbon groups;8.74370323085519e-05!GO:0000059;protein import into nucleus, docking;8.74370323085519e-05!GO:0006352;transcription initiation;8.76133773543394e-05!GO:0000079;regulation of cyclin-dependent protein kinase activity;9.2505926210752e-05!GO:0008654;phospholipid biosynthetic process;9.2505926210752e-05!GO:0031982;vesicle;9.38050342959783e-05!GO:0009109;coenzyme catabolic process;9.45524587218451e-05!GO:0006414;translational elongation;9.57654303581197e-05!GO:0006793;phosphorus metabolic process;0.000101141908618998!GO:0006796;phosphate metabolic process;0.000101141908618998!GO:0016859;cis-trans isomerase activity;0.000108235526914428!GO:0006402;mRNA catabolic process;0.000109419372413948!GO:0005762;mitochondrial large ribosomal subunit;0.000115943530476727!GO:0000315;organellar large ribosomal subunit;0.000115943530476727!GO:0004004;ATP-dependent RNA helicase activity;0.000125772476427142!GO:0031410;cytoplasmic vesicle;0.000126890173306496!GO:0006888;ER to Golgi vesicle-mediated transport;0.000141409097130102!GO:0007052;mitotic spindle organization and biogenesis;0.000144023888419884!GO:0007050;cell cycle arrest;0.000149346513644704!GO:0006338;chromatin remodeling;0.000152473983610173!GO:0009117;nucleotide metabolic process;0.000154825924710801!GO:0005048;signal sequence binding;0.000161960971217516!GO:0015077;monovalent inorganic cation transmembrane transporter activity;0.000187240219881175!GO:0051246;regulation of protein metabolic process;0.000212344969897026!GO:0007088;regulation of mitosis;0.000216719936990597!GO:0000049;tRNA binding;0.000217752299139174!GO:0016310;phosphorylation;0.000239889699501181!GO:0051087;chaperone binding;0.000261792745781746!GO:0005876;spindle microtubule;0.000269228567583558!GO:0000922;spindle pole;0.000270039581345413!GO:0016281;eukaryotic translation initiation factor 4F complex;0.000283349484534103!GO:0044431;Golgi apparatus part;0.000288782956647384!GO:0008033;tRNA processing;0.000303786985418589!GO:0007093;mitotic cell cycle checkpoint;0.000358537750302119!GO:0043681;protein import into mitochondrion;0.000381141943269124!GO:0045454;cell redox homeostasis;0.000407820224677857!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000419757973444531!GO:0006401;RNA catabolic process;0.000430640829973996!GO:0051052;regulation of DNA metabolic process;0.000478436048754419!GO:0048471;perinuclear region of cytoplasm;0.00050607333492306!GO:0051187;cofactor catabolic process;0.000517916443468049!GO:0006839;mitochondrial transport;0.000517916443468049!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.000560770750094605!GO:0016251;general RNA polymerase II transcription factor activity;0.000562459596020554!GO:0005768;endosome;0.000637273012729342!GO:0008017;microtubule binding;0.000646571433061662!GO:0044440;endosomal part;0.000648073463783208!GO:0010008;endosome membrane;0.000648073463783208!GO:0046914;transition metal ion binding;0.000649858420771117!GO:0045892;negative regulation of transcription, DNA-dependent;0.000660466172825699!GO:0051539;4 iron, 4 sulfur cluster binding;0.000680471646162239!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000693028133823638!GO:0032259;methylation;0.000702454652458002!GO:0006612;protein targeting to membrane;0.000720262976673023!GO:0030880;RNA polymerase complex;0.00075951146229954!GO:0005852;eukaryotic translation initiation factor 3 complex;0.000791741927587635!GO:0000314;organellar small ribosomal subunit;0.000791741927587635!GO:0005763;mitochondrial small ribosomal subunit;0.000791741927587635!GO:0032508;DNA duplex unwinding;0.000793921017115309!GO:0032392;DNA geometric change;0.000793921017115309!GO:0007010;cytoskeleton organization and biogenesis;0.000797502182299909!GO:0019843;rRNA binding;0.000829892301331055!GO:0003711;transcription elongation regulator activity;0.00087297533814634!GO:0008250;oligosaccharyl transferase complex;0.000875820762128869!GO:0006405;RNA export from nucleus;0.000882356382093376!GO:0032200;telomere organization and biogenesis;0.000950164435723797!GO:0000723;telomere maintenance;0.000950164435723797!GO:0008276;protein methyltransferase activity;0.000972688783612708!GO:0006626;protein targeting to mitochondrion;0.00099517803245372!GO:0004576;oligosaccharyl transferase activity;0.00101099334012174!GO:0008139;nuclear localization sequence binding;0.00101398029089788!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.00102492608768441!GO:0030518;steroid hormone receptor signaling pathway;0.00104304185280233!GO:0035258;steroid hormone receptor binding;0.00110147578907225!GO:0030867;rough endoplasmic reticulum membrane;0.00116643315100427!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.00118339851472487!GO:0012501;programmed cell death;0.00122393473073949!GO:0051252;regulation of RNA metabolic process;0.00123207354932191!GO:0045045;secretory pathway;0.00128220297598126!GO:0006270;DNA replication initiation;0.00128220297598126!GO:0004527;exonuclease activity;0.00133966744285536!GO:0015980;energy derivation by oxidation of organic compounds;0.00133966744285536!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00138015732499375!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00138015732499375!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00138015732499375!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.00138015732499375!GO:0000428;DNA-directed RNA polymerase complex;0.00138015732499375!GO:0005798;Golgi-associated vesicle;0.00141956790978743!GO:0030521;androgen receptor signaling pathway;0.00143469303673546!GO:0019783;small conjugating protein-specific protease activity;0.00143593718986786!GO:0007006;mitochondrial membrane organization and biogenesis;0.00143744485981857!GO:0006915;apoptosis;0.00144392666063745!GO:0046489;phosphoinositide biosynthetic process;0.0015030393022195!GO:0016790;thiolester hydrolase activity;0.00156753479695358!GO:0004221;ubiquitin thiolesterase activity;0.0016118829318366!GO:0048519;negative regulation of biological process;0.00162622720775191!GO:0043414;biopolymer methylation;0.00170326249272273!GO:0000082;G1/S transition of mitotic cell cycle;0.00170995503347532!GO:0004843;ubiquitin-specific protease activity;0.00170995503347532!GO:0008022;protein C-terminus binding;0.00170995503347532!GO:0030120;vesicle coat;0.0017103310691452!GO:0030662;coated vesicle membrane;0.0017103310691452!GO:0003746;translation elongation factor activity;0.00173430640187703!GO:0051920;peroxiredoxin activity;0.00188579428017674!GO:0019899;enzyme binding;0.00188769113305913!GO:0006289;nucleotide-excision repair;0.00192062029873003!GO:0005637;nuclear inner membrane;0.00194064068337642!GO:0006268;DNA unwinding during replication;0.00199458814276819!GO:0008757;S-adenosylmethionine-dependent methyltransferase activity;0.00203985865313358!GO:0005684;U2-dependent spliceosome;0.00204961309204848!GO:0003756;protein disulfide isomerase activity;0.00210053676620822!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.00210053676620822!GO:0009112;nucleobase metabolic process;0.00220924806774424!GO:0003924;GTPase activity;0.00225009730472081!GO:0000139;Golgi membrane;0.00229158123039142!GO:0048500;signal recognition particle;0.00239691894554605!GO:0000096;sulfur amino acid metabolic process;0.00248588977964007!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00248756766810357!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00248756766810357!GO:0031124;mRNA 3'-end processing;0.00249148960073859!GO:0006607;NLS-bearing substrate import into nucleus;0.00261865830284591!GO:0006611;protein export from nucleus;0.00270336008609095!GO:0016407;acetyltransferase activity;0.00273178463500983!GO:0004003;ATP-dependent DNA helicase activity;0.00290503773955243!GO:0007004;telomere maintenance via telomerase;0.00291771502296269!GO:0031072;heat shock protein binding;0.00294471773746973!GO:0018196;peptidyl-asparagine modification;0.00297537351754811!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.00297537351754811!GO:0000339;RNA cap binding;0.00308898931851252!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.00321932670137516!GO:0006730;one-carbon compound metabolic process;0.00325080196133492!GO:0008652;amino acid biosynthetic process;0.00336579117926557!GO:0008312;7S RNA binding;0.00345042150195221!GO:0045947;negative regulation of translational initiation;0.00356401976865548!GO:0000792;heterochromatin;0.0036407092952609!GO:0051540;metal cluster binding;0.00366047840231692!GO:0051536;iron-sulfur cluster binding;0.00366047840231692!GO:0046474;glycerophospholipid biosynthetic process;0.00367751628014787!GO:0046467;membrane lipid biosynthetic process;0.00377406531873389!GO:0000228;nuclear chromosome;0.00379086910560017!GO:0046966;thyroid hormone receptor binding;0.00382861107278473!GO:0006891;intra-Golgi vesicle-mediated transport;0.00382885122756417!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.00412465734166167!GO:0006284;base-excision repair;0.00413231984760525!GO:0005770;late endosome;0.00424098886221222!GO:0005839;proteasome core complex (sensu Eukaryota);0.00430874272176445!GO:0008219;cell death;0.0043233517773508!GO:0016265;death;0.0043233517773508!GO:0000786;nucleosome;0.00438740075543887!GO:0006144;purine base metabolic process;0.00474998970023077!GO:0047485;protein N-terminus binding;0.00480115164037004!GO:0030384;phosphoinositide metabolic process;0.00483646831552354!GO:0005669;transcription factor TFIID complex;0.00489193136727991!GO:0009116;nucleoside metabolic process;0.00496496546062951!GO:0043284;biopolymer biosynthetic process;0.00505783243782918!GO:0016584;nucleosome positioning;0.0052284076840516!GO:0009165;nucleotide biosynthetic process;0.00535719391354917!GO:0000781;chromosome, telomeric region;0.00543092751617706!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0056014778455766!GO:0030522;intracellular receptor-mediated signaling pathway;0.00567055143654683!GO:0007021;tubulin folding;0.00617686711964178!GO:0009451;RNA modification;0.00628668794371459!GO:0048487;beta-tubulin binding;0.00628668794371459!GO:0005769;early endosome;0.00640795438367204!GO:0000725;recombinational repair;0.00646870085134884!GO:0000724;double-strand break repair via homologous recombination;0.00646870085134884!GO:0031123;RNA 3'-end processing;0.00656586841245634!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.00672685593373539!GO:0015399;primary active transmembrane transporter activity;0.00672685593373539!GO:0044450;microtubule organizing center part;0.00681658909393536!GO:0006367;transcription initiation from RNA polymerase II promoter;0.00682121180928648!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00682489272315833!GO:0045047;protein targeting to ER;0.00682489272315833!GO:0046112;nucleobase biosynthetic process;0.00702765404577759!GO:0006278;RNA-dependent DNA replication;0.00703737705258653!GO:0006376;mRNA splice site selection;0.00707723114870044!GO:0000389;nuclear mRNA 3'-splice site recognition;0.00707723114870044!GO:0009303;rRNA transcription;0.00720629864757261!GO:0006378;mRNA polyadenylation;0.00749936236942067!GO:0000819;sister chromatid segregation;0.00762871961358356!GO:0006520;amino acid metabolic process;0.00796344584893104!GO:0042393;histone binding;0.00801672036189641!GO:0031570;DNA integrity checkpoint;0.00819565376879699!GO:0005832;chaperonin-containing T-complex;0.00848549246403266!GO:0004518;nuclease activity;0.00887125408419626!GO:0042054;histone methyltransferase activity;0.00898354715221157!GO:0043022;ribosome binding;0.00905717277074572!GO:0043488;regulation of mRNA stability;0.00967705473656188!GO:0043487;regulation of RNA stability;0.00967705473656188!GO:0006595;polyamine metabolic process;0.00967705473656188!GO:0000070;mitotic sister chromatid segregation;0.00974970337835101!GO:0031536;positive regulation of exit from mitosis;0.0097842841868204!GO:0006400;tRNA modification;0.00995363466380972!GO:0000287;magnesium ion binding;0.0100107385474238!GO:0000209;protein polyubiquitination;0.0102498265408808!GO:0000097;sulfur amino acid biosynthetic process;0.0102849675306909!GO:0016272;prefoldin complex;0.0104353582879674!GO:0033116;ER-Golgi intermediate compartment membrane;0.0105020407100109!GO:0042770;DNA damage response, signal transduction;0.0106196376571175!GO:0051098;regulation of binding;0.0108342781568485!GO:0043596;nuclear replication fork;0.0117522309219996!GO:0000178;exosome (RNase complex);0.0117696072354385!GO:0051789;response to protein stimulus;0.0120316770850445!GO:0006986;response to unfolded protein;0.0120316770850445!GO:0004298;threonine endopeptidase activity;0.0121884759812272!GO:0005875;microtubule associated complex;0.0123644120482402!GO:0030137;COPI-coated vesicle;0.012417935621838!GO:0045941;positive regulation of transcription;0.0125990129358704!GO:0045893;positive regulation of transcription, DNA-dependent;0.012914063879507!GO:0031369;translation initiation factor binding;0.012914063879507!GO:0005741;mitochondrial outer membrane;0.0131618171073266!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.0131618171073266!GO:0005905;coated pit;0.0135966881519951!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.0137678094769002!GO:0005525;GTP binding;0.0145616760020727!GO:0008190;eukaryotic initiation factor 4E binding;0.0147070959576885!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.0148506509774744!GO:0015002;heme-copper terminal oxidase activity;0.0148506509774744!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.0148506509774744!GO:0004129;cytochrome-c oxidase activity;0.0148506509774744!GO:0046483;heterocycle metabolic process;0.0152942405790963!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.0154534595666971!GO:0006541;glutamine metabolic process;0.0156326498223858!GO:0016279;protein-lysine N-methyltransferase activity;0.0163963418206156!GO:0018024;histone-lysine N-methyltransferase activity;0.0163963418206156!GO:0016278;lysine N-methyltransferase activity;0.0163963418206156!GO:0005869;dynactin complex;0.0166283646118891!GO:0030176;integral to endoplasmic reticulum membrane;0.0166303051565572!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.016681014765934!GO:0042809;vitamin D receptor binding;0.0171164235051806!GO:0005844;polysome;0.0174585963321614!GO:0006506;GPI anchor biosynthetic process;0.0180052566968775!GO:0043624;cellular protein complex disassembly;0.0184788783502201!GO:0006505;GPI anchor metabolic process;0.0184801155143895!GO:0016585;chromatin remodeling complex;0.0190659412744643!GO:0046128;purine ribonucleoside metabolic process;0.01965902466424!GO:0042278;purine nucleoside metabolic process;0.01965902466424!GO:0042802;identical protein binding;0.0198536901930533!GO:0031968;organelle outer membrane;0.0199434569315321!GO:0000152;nuclear ubiquitin ligase complex;0.0202401021571782!GO:0031577;spindle checkpoint;0.0203495999031383!GO:0065009;regulation of a molecular function;0.0203809569775473!GO:0005663;DNA replication factor C complex;0.0204496828407616!GO:0006275;regulation of DNA replication;0.0205653875137438!GO:0008097;5S rRNA binding;0.020567714854201!GO:0045792;negative regulation of cell size;0.0206086465181081!GO:0006497;protein amino acid lipidation;0.020624003879936!GO:0016891;endoribonuclease activity, producing 5'-phosphomonoesters;0.0206883988387794!GO:0016893;endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.0207391414692814!GO:0040029;regulation of gene expression, epigenetic;0.0211095207084856!GO:0019867;outer membrane;0.021221177455419!GO:0030374;ligand-dependent nuclear receptor transcription coactivator activity;0.0213080365893252!GO:0030330;DNA damage response, signal transduction by p53 class mediator;0.0214753160225804!GO:0000910;cytokinesis;0.0215186739821351!GO:0004402;histone acetyltransferase activity;0.0220619316996146!GO:0004468;lysine N-acetyltransferase activity;0.0220619316996146!GO:0051287;NAD binding;0.0228484358253909!GO:0000726;non-recombinational repair;0.0228484358253909!GO:0031252;leading edge;0.0228992372467021!GO:0006650;glycerophospholipid metabolic process;0.0233369392040542!GO:0008180;signalosome;0.0235062846444539!GO:0043130;ubiquitin binding;0.0240511107078282!GO:0032182;small conjugating protein binding;0.0240511107078282!GO:0032039;integrator complex;0.0243262715779773!GO:0000123;histone acetyltransferase complex;0.0245174447454896!GO:0050681;androgen receptor binding;0.0245674602889337!GO:0030308;negative regulation of cell growth;0.0247407416510052!GO:0030134;ER to Golgi transport vesicle;0.0247636028086246!GO:0016579;protein deubiquitination;0.0260466617129146!GO:0005850;eukaryotic translation initiation factor 2 complex;0.0263073292824532!GO:0045815;positive regulation of gene expression, epigenetic;0.0263073292824532!GO:0000086;G2/M transition of mitotic cell cycle;0.026345111868321!GO:0006916;anti-apoptosis;0.0265280943553628!GO:0030118;clathrin coat;0.026817504578174!GO:0004523;ribonuclease H activity;0.027351412314091!GO:0000077;DNA damage checkpoint;0.0275647828740837!GO:0043631;RNA polyadenylation;0.0282884245177784!GO:0032561;guanyl ribonucleotide binding;0.0286946778612382!GO:0019001;guanyl nucleotide binding;0.0286946778612382!GO:0008092;cytoskeletal protein binding;0.0297888672607132!GO:0006354;RNA elongation;0.0297888672607132!GO:0005784;translocon complex;0.0310910632221859!GO:0030145;manganese ion binding;0.0311725496594628!GO:0004748;ribonucleoside-diphosphate reductase activity;0.0327693835338952!GO:0016728;oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor;0.0327693835338952!GO:0043601;nuclear replisome;0.033050701090394!GO:0030894;replisome;0.033050701090394!GO:0006220;pyrimidine nucleotide metabolic process;0.0335062532073613!GO:0005487;nucleocytoplasmic transporter activity;0.033525702619158!GO:0005665;DNA-directed RNA polymerase II, core complex;0.033525702619158!GO:0030027;lamellipodium;0.0336609033611722!GO:0051297;centrosome organization and biogenesis;0.0336609033611722!GO:0031023;microtubule organizing center organization and biogenesis;0.0336609033611722!GO:0016301;kinase activity;0.03382692356942!GO:0050811;GABA receptor binding;0.0339160336516713!GO:0009113;purine base biosynthetic process;0.0342116719715213!GO:0032507;maintenance of cellular protein localization;0.0345984813255261!GO:0005652;nuclear lamina;0.0347514031127568!GO:0043492;ATPase activity, coupled to movement of substances;0.0349684079057287!GO:0007007;inner mitochondrial membrane organization and biogenesis;0.0352262247246238!GO:0008143;poly(A) binding;0.035434370529676!GO:0035267;NuA4 histone acetyltransferase complex;0.035728928412539!GO:0007096;regulation of exit from mitosis;0.0361256315846932!GO:0010458;exit from mitosis;0.0361256315846932!GO:0031625;ubiquitin protein ligase binding;0.0369522134512736!GO:0043069;negative regulation of programmed cell death;0.0370374044793743!GO:0032984;macromolecular complex disassembly;0.0370681284327075!GO:0006356;regulation of transcription from RNA polymerase I promoter;0.0378294959186384!GO:0030663;COPI coated vesicle membrane;0.0379155457297206!GO:0030126;COPI vesicle coat;0.0379155457297206!GO:0012506;vesicle membrane;0.0380004490393549!GO:0044433;cytoplasmic vesicle part;0.0388455256724846!GO:0046983;protein dimerization activity;0.0392799218370775!GO:0003887;DNA-directed DNA polymerase activity;0.0392799218370775!GO:0008287;protein serine/threonine phosphatase complex;0.0399011393133718!GO:0051059;NF-kappaB binding;0.0404829935671641!GO:0031970;organelle envelope lumen;0.0407476236030101!GO:0005791;rough endoplasmic reticulum;0.0407901378051361!GO:0003923;GPI-anchor transamidase activity;0.0409348800523058!GO:0016255;attachment of GPI anchor to protein;0.0409348800523058!GO:0042765;GPI-anchor transamidase complex;0.0409348800523058!GO:0043066;negative regulation of apoptosis;0.0412964697694107!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.0420002966604694!GO:0004815;aspartate-tRNA ligase activity;0.0425874307054586!GO:0006422;aspartyl-tRNA aminoacylation;0.0425874307054586!GO:0006360;transcription from RNA polymerase I promoter;0.0427343029368805!GO:0042706;eye photoreceptor cell fate commitment;0.0427411214310931!GO:0046552;photoreceptor cell fate commitment;0.0427411214310931!GO:0009081;branched chain family amino acid metabolic process;0.0432227938154034!GO:0000118;histone deacetylase complex;0.0433563671069671!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.0438145255710915!GO:0006406;mRNA export from nucleus;0.0438591002687606!GO:0004532;exoribonuclease activity;0.0438820796312237!GO:0016896;exoribonuclease activity, producing 5'-phosphomonoesters;0.0438820796312237!GO:0007018;microtubule-based movement;0.0441918208008797!GO:0009067;aspartate family amino acid biosynthetic process;0.0443460132295838!GO:0006301;postreplication repair;0.0443852602782586!GO:0042158;lipoprotein biosynthetic process;0.0444903480307365!GO:0005680;anaphase-promoting complex;0.0452940056600228!GO:0003725;double-stranded RNA binding;0.0456001555018265!GO:0006415;translational termination;0.0456001555018265!GO:0043241;protein complex disassembly;0.0459701823597014!GO:0000119;mediator complex;0.0466226050196855!GO:0050662;coenzyme binding;0.0468806825615579!GO:0009124;nucleoside monophosphate biosynthetic process;0.0469990827348738!GO:0009123;nucleoside monophosphate metabolic process;0.0469990827348738!GO:0045926;negative regulation of growth;0.047049414945214!GO:0005885;Arp2/3 protein complex;0.0473223667244636!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0478531586460209!GO:0010257;NADH dehydrogenase complex assembly;0.0478531586460209!GO:0033108;mitochondrial respiratory chain complex assembly;0.0478531586460209!GO:0008080;N-acetyltransferase activity;0.0478531586460209!GO:0004239;methionyl aminopeptidase activity;0.0484332992680541!GO:0046982;protein heterodimerization activity;0.0485095798854631!GO:0008213;protein amino acid alkylation;0.0494082911824945!GO:0006479;protein amino acid methylation;0.0494082911824945!GO:0022890;inorganic cation transmembrane transporter activity;0.0494806957128617 | |||
|sample_id=10838 | |sample_id=10838 | ||
|sample_note= | |sample_note= | ||
| Line 76: | Line 102: | ||
|sample_tissue=brain | |sample_tissue=brain | ||
|top_motifs=CRX:3.89411254545;HOX{A6,A7,B6,B7}:2.68923477091;TOPORS:2.26225138659;CDX1,2,4:2.25861044008;ADNP_IRX_SIX_ZHX:2.21370455949;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:2.14898089447;PITX1..3:2.14329702707;LHX3,4:2.10289105939;POU1F1:2.05308904069;BREu{core}:2.00261718331;TFDP1:1.9952104764;FOX{I1,J2}:1.68448098589;E2F1..5:1.65421308718;NANOG:1.64366777861;AHR_ARNT_ARNT2:1.64320420305;NFY{A,B,C}:1.62512883576;bHLH_family:1.57431620853;ZNF143:1.53180533514;YY1:1.47556551787;ZBTB16:1.42265743862;FOXM1:1.40666831641;VSX1,2:1.33792691124;ARID5B:1.31495230201;POU6F1:1.28412449231;IKZF2:1.27117234269;HIF1A:1.24025655951;NRF1:1.18651167492;TEF:1.18065830012;PRRX1,2:1.16769304883;AIRE:1.1496470568;PDX1:1.12963232349;PAX3,7:1.12169099681;ZNF384:1.11958634397;FOXP1:1.11896989519;NKX2-3_NKX2-5:1.09530089262;ZFP161:1.09281343629;PAX4:1.04572460979;NKX2-2,8:1.02470817188;BPTF:1.02002646954;ZIC1..3:1.00790816923;RREB1:0.973499515791;GATA4:0.964793961918;EVI1:0.941426490741;PBX1:0.904851240696;PATZ1:0.872871948206;GFI1:0.843380126814;MYB:0.840214374669;MED-1{core}:0.835947152614;MZF1:0.798706528671;SOX{8,9,10}:0.797187835286;ATF4:0.779053533108;RBPJ:0.749323443391;TAL1_TCF{3,4,12}:0.645931836261;POU2F1..3:0.638856669925;ELK1,4_GABP{A,B1}:0.628077948067;FOXD3:0.623002390645;PAX8:0.605708308076;NKX2-1,4:0.601328121216;NKX6-1,2:0.594351423585;TFAP2B:0.580258391417;MYBL2:0.574005425043;FOXN1:0.560196586357;NR6A1:0.552700223819;TLX1..3_NFIC{dimer}:0.551138615493;PAX6:0.533078070295;HMGA1,2:0.452785637659;SOX17:0.431199461324;STAT5{A,B}:0.417533225912;HSF1,2:0.415674317387;UFEwm:0.360569153201;OCT4_SOX2{dimer}:0.354520081587;MYOD1:0.340278109913;RFX1:0.325271968403;RFX2..5_RFXANK_RFXAP:0.299511290001;POU5F1:0.289054033669;KLF4:0.250529672203;TGIF1:0.242198793823;ATF5_CREB3:0.237747553483;MAZ:0.236719526255;PAX5:0.228977426631;CREB1:0.210323355763;GTF2I:0.206679609969;SOX5:0.182780445816;GTF2A1,2:0.180636637563;RXR{A,B,G}:0.169552679734;CDC5L:0.146828996827;SP1:0.134961038921;HOXA9_MEIS1:0.123612368989;TFAP2{A,C}:0.117886059622;HIC1:0.115100373885;T:0.0971767045507;FOXO1,3,4:0.0620806206364;CUX2:0.058630664536;GFI1B:0.0405514343814;FOXP3:0.0387954977942;ZNF423:0.0362550890003;NFIL3:0.00166235105085;MEF2{A,B,C,D}:-0.00158243413551;STAT1,3:-0.0310833902958;SOX2:-0.0363076330851;GATA6:-0.0409591765115;MTE{core}:-0.0578974708418;ALX1:-0.0671942330283;RORA:-0.067459707901;PAX1,9:-0.103995064563;NHLH1,2:-0.106337348207;HOX{A5,B5}:-0.10873780956;EGR1..3:-0.112822564048;TP53:-0.125568225033;ALX4:-0.128610045013;FOXA2:-0.152013158857;ZBTB6:-0.158823726635;REST:-0.169472980165;HNF1A:-0.18631398644;LEF1_TCF7_TCF7L1,2:-0.204388815078;GZF1:-0.211551373024;ONECUT1,2:-0.222791119539;NKX3-1:-0.224498331872;POU3F1..4:-0.230202184041;FOX{F1,F2,J1}:-0.244803808042;HNF4A_NR2F1,2:-0.284665694493;NKX3-2:-0.287160575375;XCPE1{core}:-0.291604400877;JUN:-0.30701841092;AR:-0.315469495727;FOXQ1:-0.334816632536;PAX2:-0.360480760763;FOXL1:-0.385735646228;LMO2:-0.396931661153;HAND1,2:-0.401660648287;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.406418732509;SNAI1..3:-0.428056337803;CEBPA,B_DDIT3:-0.440411011762;MYFfamily:-0.44631360484;ZEB1:-0.470246718653;NFKB1_REL_RELA:-0.480731832735;IKZF1:-0.485881708477;PRDM1:-0.496062188673;TEAD1:-0.530995257023;NR1H4:-0.540249968238;HOX{A4,D4}:-0.540411930912;EN1,2:-0.556094819554;EP300:-0.571061391999;FOX{D1,D2}:-0.582611199585;TBP:-0.622212806404;HES1:-0.627756710815;TBX4,5:-0.658285986619;ATF2:-0.661391563138;HLF:-0.691349200816;NFE2:-0.723325240946;IRF7:-0.741727893526;NR5A1,2:-0.768156167253;DBP:-0.783031102336;SPIB:-0.799535925415;SPI1:-0.804845826529;XBP1:-0.805620975348;ESRRA:-0.80640584513;FOSL2:-0.807847114718;MTF1:-0.844166677221;BACH2:-0.848709188319;FOS_FOS{B,L1}_JUN{B,D}:-0.859318617575;NFE2L2:-0.882605049622;DMAP1_NCOR{1,2}_SMARC:-0.889137355071;HBP1_HMGB_SSRP1_UBTF:-0.88965212655;PPARG:-0.893996166414;RUNX1..3:-0.913947146294;SMAD1..7,9:-0.947245878004;ELF1,2,4:-1.00606556001;NFE2L1:-1.0061438554;NR3C1:-1.01294581497;SPZ1:-1.01611456501;GCM1,2:-1.23462219021;GLI1..3:-1.23562670048;SREBF1,2:-1.2718590306;RXRA_VDR{dimer}:-1.28469896906;SRF:-1.30714716139;IRF1,2:-1.32331825843;ETS1,2:-1.40298331698;NFIX:-1.49883005999;HMX1:-1.52929682334;MAFB:-1.53373402198;NFATC1..3:-1.55716745083;ATF6:-1.57118336089;ZNF238:-1.57174275827;EBF1:-1.65623740507;NANOG{mouse}:-1.65992963252;ESR1:-1.72333673117;TFAP4:-1.73056626625;TLX2:-1.75662504092;ZNF148:-1.83424918951;TFCP2:-2.01833052776;STAT2,4,6:-2.03091061632 | |top_motifs=CRX:3.89411254545;HOX{A6,A7,B6,B7}:2.68923477091;TOPORS:2.26225138659;CDX1,2,4:2.25861044008;ADNP_IRX_SIX_ZHX:2.21370455949;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:2.14898089447;PITX1..3:2.14329702707;LHX3,4:2.10289105939;POU1F1:2.05308904069;BREu{core}:2.00261718331;TFDP1:1.9952104764;FOX{I1,J2}:1.68448098589;E2F1..5:1.65421308718;NANOG:1.64366777861;AHR_ARNT_ARNT2:1.64320420305;NFY{A,B,C}:1.62512883576;bHLH_family:1.57431620853;ZNF143:1.53180533514;YY1:1.47556551787;ZBTB16:1.42265743862;FOXM1:1.40666831641;VSX1,2:1.33792691124;ARID5B:1.31495230201;POU6F1:1.28412449231;IKZF2:1.27117234269;HIF1A:1.24025655951;NRF1:1.18651167492;TEF:1.18065830012;PRRX1,2:1.16769304883;AIRE:1.1496470568;PDX1:1.12963232349;PAX3,7:1.12169099681;ZNF384:1.11958634397;FOXP1:1.11896989519;NKX2-3_NKX2-5:1.09530089262;ZFP161:1.09281343629;PAX4:1.04572460979;NKX2-2,8:1.02470817188;BPTF:1.02002646954;ZIC1..3:1.00790816923;RREB1:0.973499515791;GATA4:0.964793961918;EVI1:0.941426490741;PBX1:0.904851240696;PATZ1:0.872871948206;GFI1:0.843380126814;MYB:0.840214374669;MED-1{core}:0.835947152614;MZF1:0.798706528671;SOX{8,9,10}:0.797187835286;ATF4:0.779053533108;RBPJ:0.749323443391;TAL1_TCF{3,4,12}:0.645931836261;POU2F1..3:0.638856669925;ELK1,4_GABP{A,B1}:0.628077948067;FOXD3:0.623002390645;PAX8:0.605708308076;NKX2-1,4:0.601328121216;NKX6-1,2:0.594351423585;TFAP2B:0.580258391417;MYBL2:0.574005425043;FOXN1:0.560196586357;NR6A1:0.552700223819;TLX1..3_NFIC{dimer}:0.551138615493;PAX6:0.533078070295;HMGA1,2:0.452785637659;SOX17:0.431199461324;STAT5{A,B}:0.417533225912;HSF1,2:0.415674317387;UFEwm:0.360569153201;OCT4_SOX2{dimer}:0.354520081587;MYOD1:0.340278109913;RFX1:0.325271968403;RFX2..5_RFXANK_RFXAP:0.299511290001;POU5F1:0.289054033669;KLF4:0.250529672203;TGIF1:0.242198793823;ATF5_CREB3:0.237747553483;MAZ:0.236719526255;PAX5:0.228977426631;CREB1:0.210323355763;GTF2I:0.206679609969;SOX5:0.182780445816;GTF2A1,2:0.180636637563;RXR{A,B,G}:0.169552679734;CDC5L:0.146828996827;SP1:0.134961038921;HOXA9_MEIS1:0.123612368989;TFAP2{A,C}:0.117886059622;HIC1:0.115100373885;T:0.0971767045507;FOXO1,3,4:0.0620806206364;CUX2:0.058630664536;GFI1B:0.0405514343814;FOXP3:0.0387954977942;ZNF423:0.0362550890003;NFIL3:0.00166235105085;MEF2{A,B,C,D}:-0.00158243413551;STAT1,3:-0.0310833902958;SOX2:-0.0363076330851;GATA6:-0.0409591765115;MTE{core}:-0.0578974708418;ALX1:-0.0671942330283;RORA:-0.067459707901;PAX1,9:-0.103995064563;NHLH1,2:-0.106337348207;HOX{A5,B5}:-0.10873780956;EGR1..3:-0.112822564048;TP53:-0.125568225033;ALX4:-0.128610045013;FOXA2:-0.152013158857;ZBTB6:-0.158823726635;REST:-0.169472980165;HNF1A:-0.18631398644;LEF1_TCF7_TCF7L1,2:-0.204388815078;GZF1:-0.211551373024;ONECUT1,2:-0.222791119539;NKX3-1:-0.224498331872;POU3F1..4:-0.230202184041;FOX{F1,F2,J1}:-0.244803808042;HNF4A_NR2F1,2:-0.284665694493;NKX3-2:-0.287160575375;XCPE1{core}:-0.291604400877;JUN:-0.30701841092;AR:-0.315469495727;FOXQ1:-0.334816632536;PAX2:-0.360480760763;FOXL1:-0.385735646228;LMO2:-0.396931661153;HAND1,2:-0.401660648287;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.406418732509;SNAI1..3:-0.428056337803;CEBPA,B_DDIT3:-0.440411011762;MYFfamily:-0.44631360484;ZEB1:-0.470246718653;NFKB1_REL_RELA:-0.480731832735;IKZF1:-0.485881708477;PRDM1:-0.496062188673;TEAD1:-0.530995257023;NR1H4:-0.540249968238;HOX{A4,D4}:-0.540411930912;EN1,2:-0.556094819554;EP300:-0.571061391999;FOX{D1,D2}:-0.582611199585;TBP:-0.622212806404;HES1:-0.627756710815;TBX4,5:-0.658285986619;ATF2:-0.661391563138;HLF:-0.691349200816;NFE2:-0.723325240946;IRF7:-0.741727893526;NR5A1,2:-0.768156167253;DBP:-0.783031102336;SPIB:-0.799535925415;SPI1:-0.804845826529;XBP1:-0.805620975348;ESRRA:-0.80640584513;FOSL2:-0.807847114718;MTF1:-0.844166677221;BACH2:-0.848709188319;FOS_FOS{B,L1}_JUN{B,D}:-0.859318617575;NFE2L2:-0.882605049622;DMAP1_NCOR{1,2}_SMARC:-0.889137355071;HBP1_HMGB_SSRP1_UBTF:-0.88965212655;PPARG:-0.893996166414;RUNX1..3:-0.913947146294;SMAD1..7,9:-0.947245878004;ELF1,2,4:-1.00606556001;NFE2L1:-1.0061438554;NR3C1:-1.01294581497;SPZ1:-1.01611456501;GCM1,2:-1.23462219021;GLI1..3:-1.23562670048;SREBF1,2:-1.2718590306;RXRA_VDR{dimer}:-1.28469896906;SRF:-1.30714716139;IRF1,2:-1.32331825843;ETS1,2:-1.40298331698;NFIX:-1.49883005999;HMX1:-1.52929682334;MAFB:-1.53373402198;NFATC1..3:-1.55716745083;ATF6:-1.57118336089;ZNF238:-1.57174275827;EBF1:-1.65623740507;NANOG{mouse}:-1.65992963252;ESR1:-1.72333673117;TFAP4:-1.73056626625;TLX2:-1.75662504092;ZNF148:-1.83424918951;TFCP2:-2.01833052776;STAT2,4,6:-2.03091061632 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10838-111E1;search_select_hide=table117:FF:10838-111E1 | |||
}} | }} | ||
Latest revision as of 15:08, 3 June 2020
| Name: | medulloblastoma cell line:D283 Med |
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| Species: | Human (Homo sapiens) |
| Library ID: | CNhs12805 |
| Sample type: | cell lines |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
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Sample information
RNA information
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| Download raw sequence, BAM & CTSS | ||||||||||||||
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| RNA-Seq Accession numbers | ||||||||||||||||||||||||||||||||
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12805
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12805
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.22 |
| 10 | 10 | 0.207 |
| 100 | 100 | 0.8 |
| 101 | 101 | 0.722 |
| 102 | 102 | 0.969 |
| 103 | 103 | 0.0324 |
| 104 | 104 | 0.446 |
| 105 | 105 | 0.0502 |
| 106 | 106 | 0.0127 |
| 107 | 107 | 0.0783 |
| 108 | 108 | 0.846 |
| 109 | 109 | 0.0586 |
| 11 | 11 | 0.0994 |
| 110 | 110 | 0.399 |
| 111 | 111 | 0.271 |
| 112 | 112 | 0.223 |
| 113 | 113 | 0.451 |
| 114 | 114 | 0.0148 |
| 115 | 115 | 0.602 |
| 116 | 116 | 0.675 |
| 117 | 117 | 0.322 |
| 118 | 118 | 0.788 |
| 119 | 119 | 0.378 |
| 12 | 12 | 0.838 |
| 120 | 120 | 0.353 |
| 121 | 121 | 0.816 |
| 122 | 122 | 0.513 |
| 123 | 123 | 0.893 |
| 124 | 124 | 0.149 |
| 125 | 125 | 0.956 |
| 126 | 126 | 0.534 |
| 127 | 127 | 0.336 |
| 128 | 128 | 0.0387 |
| 129 | 129 | 0.333 |
| 13 | 13 | 0.855 |
| 130 | 130 | 0.713 |
| 131 | 131 | 0.42 |
| 132 | 132 | 0.448 |
| 133 | 133 | 0.0397 |
| 134 | 134 | 0.292 |
| 135 | 135 | 0.00813 |
| 136 | 136 | 0.659 |
| 137 | 137 | 0.129 |
| 138 | 138 | 0.195 |
| 139 | 139 | 0.0133 |
| 14 | 14 | 0.529 |
| 140 | 140 | 0.353 |
| 141 | 141 | 0.965 |
| 142 | 142 | 0.67 |
| 143 | 143 | 0.00129 |
| 144 | 144 | 0.966 |
| 145 | 145 | 0.414 |
| 146 | 146 | 0.289 |
| 147 | 147 | 0.845 |
| 148 | 148 | 0.0759 |
| 149 | 149 | 0.0526 |
| 15 | 15 | 0.17 |
| 150 | 150 | 0.462 |
| 151 | 151 | 0.134 |
| 152 | 152 | 0.0226 |
| 153 | 153 | 0.98 |
| 154 | 154 | 0.823 |
| 155 | 155 | 0.909 |
| 156 | 156 | 0.458 |
| 157 | 157 | 0.257 |
| 158 | 158 | 0.884 |
| 159 | 159 | 0.0789 |
| 16 | 16 | 0.195 |
| 160 | 160 | 0.508 |
| 161 | 161 | 0.0918 |
| 162 | 162 | 0.659 |
| 163 | 163 | 0.696 |
| 164 | 164 | 0.516 |
| 165 | 165 | 0.151 |
| 166 | 166 | 0.895 |
| 167 | 167 | 0.587 |
| 168 | 168 | 0.231 |
| 169 | 169 | 0.0068 |
| 17 | 17 | 0.295 |
| 18 | 18 | 0.263 |
| 19 | 19 | 0.12 |
| 2 | 2 | 0.103 |
| 20 | 20 | 0.53 |
| 21 | 21 | 0.891 |
| 22 | 22 | 0.153 |
| 23 | 23 | 0.00965 |
| 24 | 24 | 0.563 |
| 25 | 25 | 0.315 |
| 26 | 26 | 0.222 |
| 27 | 27 | 0.0646 |
| 28 | 28 | 0.905 |
| 29 | 29 | 0.41 |
| 3 | 3 | 0.19 |
| 30 | 30 | 0.402 |
| 31 | 31 | 0.329 |
| 32 | 32 | 0.0145 |
| 33 | 33 | 0.435 |
| 34 | 34 | 0.239 |
| 35 | 35 | 0.997 |
| 36 | 36 | 0.199 |
| 37 | 37 | 0.17 |
| 38 | 38 | 0.242 |
| 39 | 39 | 0.326 |
| 4 | 4 | 0.755 |
| 40 | 40 | 0.244 |
| 41 | 41 | 0.0595 |
| 42 | 42 | 0.443 |
| 43 | 43 | 0.135 |
| 44 | 44 | 0.554 |
| 45 | 45 | 0.307 |
| 46 | 46 | 0.208 |
| 47 | 47 | 0.386 |
| 48 | 48 | 0.277 |
| 49 | 49 | 0.213 |
| 5 | 5 | 0.158 |
| 50 | 50 | 0.562 |
| 51 | 51 | 0.243 |
| 52 | 52 | 0.329 |
| 53 | 53 | 0.636 |
| 54 | 54 | 0.283 |
| 55 | 55 | 0.143 |
| 56 | 56 | 0.33 |
| 57 | 57 | 0.878 |
| 58 | 58 | 0.245 |
| 59 | 59 | 0.0302 |
| 6 | 6 | 0.943 |
| 60 | 60 | 0.0554 |
| 61 | 61 | 0.407 |
| 62 | 62 | 0.105 |
| 63 | 63 | 0.196 |
| 64 | 64 | 0.478 |
| 65 | 65 | 0.0518 |
| 66 | 66 | 0.91 |
| 67 | 67 | 0.966 |
| 68 | 68 | 0.495 |
| 69 | 69 | 0.507 |
| 7 | 7 | 0.473 |
| 70 | 70 | 0.0235 |
| 71 | 71 | 0.103 |
| 72 | 72 | 0.0463 |
| 73 | 73 | 0.0216 |
| 74 | 74 | 0.326 |
| 75 | 75 | 0.226 |
| 76 | 76 | 0.885 |
| 77 | 77 | 0.0547 |
| 78 | 78 | 0.737 |
| 79 | 79 | 0.0572 |
| 8 | 8 | 0.291 |
| 80 | 80 | 0.0184 |
| 81 | 81 | 0.53 |
| 82 | 82 | 0.0321 |
| 83 | 83 | 0.792 |
| 84 | 84 | 0.207 |
| 85 | 85 | 0.0467 |
| 86 | 86 | 0.659 |
| 87 | 87 | 0.177 |
| 88 | 88 | 0.918 |
| 89 | 89 | 0.0845 |
| 9 | 9 | 0.0933 |
| 90 | 90 | 0.814 |
| 91 | 91 | 0.257 |
| 92 | 92 | 0.0443 |
| 93 | 93 | 0.801 |
| 94 | 94 | 0.106 |
| 95 | 95 | 0.315 |
| 96 | 96 | 0.224 |
| 97 | 97 | 0.436 |
| 98 | 98 | 0.114 |
| 99 | 99 | 0.58 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs12805
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0000210 human sample
FF:0101359 medulloblastoma cell line sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0002371 (somatic cell)
0002319 (neural cell)
0000095 (neuron associated cell)
0000243 (glial cell (sensu Vertebrata))
0000125 (glial cell)
0000255 (eukaryotic cell)
DOID: Disease
4 (disease)
0050686 (organ system cancer)
162 (cancer)
14566 (disease of cellular proliferation)
3093 (nervous system cancer)
UBERON: Anatomy
0000468 (multi-cellular organism)
0000955 (brain)
0004121 (ectoderm-derived structure)
0011216 (organ system subdivision)
0000062 (organ)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000477 (anatomical cluster)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0010317 (germ layer / neural crest derived structure)
0001017 (central nervous system)
0001016 (nervous system)
FF: FANTOM5
0000102 (sample by type)
0000003 (cell line sample)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0100711 (glioma cell line sample)
0100255 (brain cell line sample)
0100690 (brain cancer cell line sample)
0101531 (glial cell line sample)
0101359 (medulloblastoma cell line sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000133 (neurectodermal cell)
CL:0000339 (glioblast (sensu Vertebrata))
CL:0000221 (ectodermal cell)
UBERON:0002532 (epiblast (generic))
UBERON:0006601 (presumptive ectoderm)
UBERON:0006238 (future brain)
UBERON:0010316 (germ layer / neural crest)
