FF:11686-122I3: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet= | |DRA_sample_Accession=CAGE@SAMD00005296 | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL: | |accession_numbers=CAGE;DRX008200;DRR009072;DRZ000497;DRZ001882;DRZ011847;DRZ013232 | ||
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0007100,UBERON:0000948,UBERON:0010314,UBERON:0000062,UBERON:0004120,UBERON:0000061,UBERON:0000465,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0003103,UBERON:0010317,UBERON:0004535,UBERON:0001009 | |||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0002371,CL:0000393,CL:0000183,CL:0000187,CL:0000211,CL:0000255,CL:0002494,CL:0000737,CL:0000746 | |||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000118 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score= | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
| Line 35: | Line 42: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Cardiac%2520Myocyte%252c%2520donor3.CNhs12571.11686-122I3.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Cardiac%2520Myocyte%252c%2520donor3.CNhs12571.11686-122I3.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Cardiac%2520Myocyte%252c%2520donor3.CNhs12571.11686-122I3.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Cardiac%2520Myocyte%252c%2520donor3.CNhs12571.11686-122I3.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Cardiac%2520Myocyte%252c%2520donor3.CNhs12571.11686-122I3.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:11686-122I3 | |id=FF:11686-122I3 | ||
|is_a=EFO:0002091;;FF: | |is_a=EFO:0002091;;FF:0000118 | ||
|is_obsolete= | |||
|library_id=CNhs12571 | |||
|library_id_phase_based=2:CNhs12571 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11686 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11686 | |||
|name=Cardiac Myocyte, donor3 | |name=Cardiac Myocyte, donor3 | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
| Line 42: | Line 61: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs12571,LSID917,release012,COMPLETED | |profile_hcage=CNhs12571,LSID917,release012,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=,,, | |profile_srnaseq=,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
|repeat_enrich_byfamily=0,0,0,0,0,0,0,-0.0614234466809992,0,-0.0627002998219774,-0.185772126107898,0,0,0,0,0,0,0,0,0,0,0,0,0,0.061338822023109,0,0,0,0.0896969280074965,0,-0.0979578962680575,0,0,-0.132956589778862,0,0,0,0,0,0,0,0,0,0,0,0,-0.0670782390287249,0,0,0,0,0,0,0,0,0.0252322705898591,0,0,0,0.141006687969447,0,0,0.098894583405387,-0.0447361802739647,0,0,-0.0450874462444566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.102655157069273,0,0,0,0,0,0,0.0410965416245539,0,0,0,-7.55798902623006e-05,0.167914572839493,0,0.277617907647794,0,0,-0.0980353512377064,-0.0679738568161715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0272662311718699,0,0,0,-0.0569532619297451,-0.224300641713726,0,0,0,0,0,0 | |||
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| |||
|rna_box=122 | |rna_box=122 | ||
|rna_catalog_number=SC6205 | |rna_catalog_number=SC6205 | ||
| Line 57: | Line 79: | ||
|rna_weight_ug=10 | |rna_weight_ug=10 | ||
|sample_age= | |sample_age= | ||
|sample_category=primary cells | |||
|sample_cell_catalog=N/A | |sample_cell_catalog=N/A | ||
|sample_cell_line= | |sample_cell_line= | ||
| Line 69: | Line 92: | ||
|sample_ethnicity= | |sample_ethnicity= | ||
|sample_experimental_condition= | |sample_experimental_condition= | ||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;1.17974582187463e-231!GO:0005737;cytoplasm;2.31183550128505e-206!GO:0043226;organelle;5.59504730295732e-181!GO:0043229;intracellular organelle;1.28974009495089e-180!GO:0043231;intracellular membrane-bound organelle;1.82486661652616e-180!GO:0043227;membrane-bound organelle;3.44281319900264e-180!GO:0044444;cytoplasmic part;5.32981276703514e-150!GO:0044422;organelle part;8.46669521541723e-137!GO:0044446;intracellular organelle part;2.67703539984925e-135!GO:0032991;macromolecular complex;3.36914775339373e-95!GO:0030529;ribonucleoprotein complex;1.57227150813394e-85!GO:0005515;protein binding;1.72866988508075e-83!GO:0044237;cellular metabolic process;1.82604879956411e-83!GO:0044238;primary metabolic process;1.82604879956411e-83!GO:0043170;macromolecule metabolic process;9.06491583494703e-74!GO:0005739;mitochondrion;5.703160832741e-70!GO:0043233;organelle lumen;3.45675597976154e-69!GO:0031974;membrane-enclosed lumen;3.45675597976154e-69!GO:0003723;RNA binding;3.44279702782737e-65!GO:0044428;nuclear part;1.584990756598e-61!GO:0005634;nucleus;3.1298396088935e-59!GO:0005840;ribosome;1.96735045991684e-54!GO:0019538;protein metabolic process;7.08215269568804e-54!GO:0031090;organelle membrane;1.81295499102178e-53!GO:0006412;translation;4.51344284177854e-52!GO:0016043;cellular component organization and biogenesis;6.86303911102657e-52!GO:0009058;biosynthetic process;1.00210449973775e-48!GO:0044260;cellular macromolecule metabolic process;1.58428878708577e-48!GO:0003735;structural constituent of ribosome;1.61261669828011e-48!GO:0044429;mitochondrial part;8.03896845795115e-48!GO:0043234;protein complex;1.50437538641757e-47!GO:0044267;cellular protein metabolic process;2.71555471140713e-47!GO:0015031;protein transport;1.29527408136632e-44!GO:0033036;macromolecule localization;3.01976695606628e-44!GO:0044249;cellular biosynthetic process;7.89669609960299e-44!GO:0006396;RNA processing;1.66134288659257e-42!GO:0033279;ribosomal subunit;1.9054553979788e-42!GO:0009059;macromolecule biosynthetic process;2.38490698154526e-42!GO:0031967;organelle envelope;2.06511702720388e-41!GO:0045184;establishment of protein localization;2.07516530741399e-41!GO:0008104;protein localization;2.47610899247489e-41!GO:0031975;envelope;5.36136795789294e-41!GO:0005829;cytosol;5.14486671238047e-40!GO:0031981;nuclear lumen;1.82020762647156e-36!GO:0043283;biopolymer metabolic process;3.90786193449588e-34!GO:0046907;intracellular transport;7.8958549985465e-34!GO:0065003;macromolecular complex assembly;1.01748252005021e-33!GO:0016071;mRNA metabolic process;2.65497914740561e-33!GO:0005830;cytosolic ribosome (sensu Eukaryota);1.48426313922704e-31!GO:0022607;cellular component assembly;6.39374307055291e-31!GO:0022613;ribonucleoprotein complex biogenesis and assembly;9.49472083788688e-31!GO:0010467;gene expression;9.95750157304097e-31!GO:0008380;RNA splicing;1.3051855554262e-30!GO:0006996;organelle organization and biogenesis;2.05794899693555e-30!GO:0005740;mitochondrial envelope;2.14949195991916e-30!GO:0043228;non-membrane-bound organelle;1.49622249821608e-29!GO:0043232;intracellular non-membrane-bound organelle;1.49622249821608e-29!GO:0006397;mRNA processing;4.85758069059917e-29!GO:0031966;mitochondrial membrane;1.36123257206434e-28!GO:0006886;intracellular protein transport;4.16500042831953e-28!GO:0019866;organelle inner membrane;3.34457795183156e-27!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;4.38848340093127e-26!GO:0005743;mitochondrial inner membrane;2.1315168191753e-25!GO:0044445;cytosolic part;3.80465579441119e-25!GO:0005783;endoplasmic reticulum;9.2310113202301e-25!GO:0012505;endomembrane system;7.98694716867079e-23!GO:0005681;spliceosome;9.48105068337896e-23!GO:0006457;protein folding;4.43458610925392e-22!GO:0015935;small ribosomal subunit;6.20693767392426e-22!GO:0005654;nucleoplasm;7.62008664761212e-22!GO:0006119;oxidative phosphorylation;1.29280773258053e-21!GO:0015934;large ribosomal subunit;1.82338100517871e-21!GO:0031980;mitochondrial lumen;2.89520161324899e-21!GO:0005759;mitochondrial matrix;2.89520161324899e-21!GO:0051649;establishment of cellular localization;3.4378666361334e-21!GO:0051641;cellular localization;5.96634748779129e-21!GO:0044455;mitochondrial membrane part;8.19843798062678e-21!GO:0000166;nucleotide binding;3.14695861475302e-20!GO:0044432;endoplasmic reticulum part;9.5055566697887e-20!GO:0048770;pigment granule;1.07204843821508e-19!GO:0042470;melanosome;1.07204843821508e-19!GO:0006259;DNA metabolic process;2.52215533338148e-19!GO:0022618;protein-RNA complex assembly;2.81097062686567e-19!GO:0007049;cell cycle;6.9979101658322e-19!GO:0016462;pyrophosphatase activity;7.6765923203976e-19!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;8.20094871564027e-19!GO:0016817;hydrolase activity, acting on acid anhydrides;1.26107007975556e-18!GO:0017111;nucleoside-triphosphatase activity;1.26070876831216e-17!GO:0044451;nucleoplasm part;1.45454189808104e-17!GO:0005746;mitochondrial respiratory chain;1.61961851442838e-17!GO:0005794;Golgi apparatus;1.08261277707999e-16!GO:0044265;cellular macromolecule catabolic process;1.34681111199965e-16!GO:0008135;translation factor activity, nucleic acid binding;2.49027265873045e-16!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);2.63773771374009e-16!GO:0016874;ligase activity;3.02415767984246e-16!GO:0000502;proteasome complex (sensu Eukaryota);5.72087402928934e-16!GO:0005730;nucleolus;6.00154601657368e-16!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);9.77397940788991e-16!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;1.29672764933416e-15!GO:0005761;mitochondrial ribosome;1.6687090932342e-15!GO:0000313;organellar ribosome;1.6687090932342e-15!GO:0051603;proteolysis involved in cellular protein catabolic process;2.97835094760413e-15!GO:0051186;cofactor metabolic process;3.65503538618997e-15!GO:0050136;NADH dehydrogenase (quinone) activity;6.06196844995698e-15!GO:0003954;NADH dehydrogenase activity;6.06196844995698e-15!GO:0008137;NADH dehydrogenase (ubiquinone) activity;6.06196844995698e-15!GO:0019941;modification-dependent protein catabolic process;6.16394811737776e-15!GO:0043632;modification-dependent macromolecule catabolic process;6.16394811737776e-15!GO:0006511;ubiquitin-dependent protein catabolic process;6.9535994946273e-15!GO:0008134;transcription factor binding;7.74071579159008e-15!GO:0044257;cellular protein catabolic process;9.36943372798358e-15!GO:0043285;biopolymer catabolic process;1.04164354755386e-14!GO:0044248;cellular catabolic process;1.23939017857791e-14!GO:0009057;macromolecule catabolic process;1.24581663995272e-14!GO:0006512;ubiquitin cycle;1.30679312869686e-14!GO:0032553;ribonucleotide binding;1.38637575483991e-14!GO:0032555;purine ribonucleotide binding;1.38637575483991e-14!GO:0022402;cell cycle process;2.10470960559125e-14!GO:0017076;purine nucleotide binding;2.53144052530583e-14!GO:0016192;vesicle-mediated transport;3.43371513381967e-14!GO:0051082;unfolded protein binding;3.51272196388703e-14!GO:0048193;Golgi vesicle transport;5.85339035506668e-14!GO:0006605;protein targeting;7.68802421989307e-14!GO:0042175;nuclear envelope-endoplasmic reticulum network;8.66716144412505e-14!GO:0003676;nucleic acid binding;8.73482558866789e-14!GO:0000278;mitotic cell cycle;1.564563919215e-13!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;2.24024885276454e-13!GO:0005789;endoplasmic reticulum membrane;2.3338257099188e-13!GO:0042775;organelle ATP synthesis coupled electron transport;2.42483252451154e-13!GO:0042773;ATP synthesis coupled electron transport;2.42483252451154e-13!GO:0003743;translation initiation factor activity;3.18524282408553e-13!GO:0006413;translational initiation;3.19424038053397e-13!GO:0030163;protein catabolic process;3.78900947981283e-13!GO:0030964;NADH dehydrogenase complex (quinone);3.88840504276567e-13!GO:0045271;respiratory chain complex I;3.88840504276567e-13!GO:0005747;mitochondrial respiratory chain complex I;3.88840504276567e-13!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;1.15240532665409e-12!GO:0043412;biopolymer modification;1.39501260082459e-12!GO:0042254;ribosome biogenesis and assembly;1.78715595168107e-12!GO:0006732;coenzyme metabolic process;3.21618852220456e-12!GO:0005635;nuclear envelope;5.60952110144238e-12!GO:0012501;programmed cell death;1.17896489894851e-11!GO:0009055;electron carrier activity;1.2900533684456e-11!GO:0006464;protein modification process;1.6886289397792e-11!GO:0000398;nuclear mRNA splicing, via spliceosome;2.20565793146656e-11!GO:0000375;RNA splicing, via transesterification reactions;2.20565793146656e-11!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;2.20565793146656e-11!GO:0005793;ER-Golgi intermediate compartment;2.30148434071954e-11!GO:0006915;apoptosis;2.84026837491279e-11!GO:0008219;cell death;2.03652428823768e-10!GO:0016265;death;2.03652428823768e-10!GO:0006974;response to DNA damage stimulus;2.6679005319696e-10!GO:0031965;nuclear membrane;2.67975659659506e-10!GO:0016070;RNA metabolic process;2.82422571154079e-10!GO:0006446;regulation of translational initiation;2.83517864904886e-10!GO:0005524;ATP binding;4.37044652426665e-10!GO:0044453;nuclear membrane part;4.83557919695408e-10!GO:0008565;protein transporter activity;5.2907749748732e-10!GO:0032559;adenyl ribonucleotide binding;5.74757935614974e-10!GO:0005694;chromosome;6.68313576089167e-10!GO:0003712;transcription cofactor activity;1.02149154890069e-09!GO:0051276;chromosome organization and biogenesis;1.02983194113811e-09!GO:0009259;ribonucleotide metabolic process;1.10402254899768e-09!GO:0030554;adenyl nucleotide binding;1.19244883448909e-09!GO:0003924;GTPase activity;1.41265570166325e-09!GO:0048523;negative regulation of cellular process;1.48160172856e-09!GO:0043687;post-translational protein modification;1.58422239681227e-09!GO:0006163;purine nucleotide metabolic process;1.83736226586305e-09!GO:0065004;protein-DNA complex assembly;1.88311376609618e-09!GO:0051301;cell division;1.93670637613754e-09!GO:0006913;nucleocytoplasmic transport;2.75894698383533e-09!GO:0006461;protein complex assembly;2.94090567604007e-09!GO:0044427;chromosomal part;3.54173745240305e-09!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;3.64695930663677e-09!GO:0005788;endoplasmic reticulum lumen;3.84311937121161e-09!GO:0000087;M phase of mitotic cell cycle;4.31063891972823e-09!GO:0006399;tRNA metabolic process;4.96811551595572e-09!GO:0009150;purine ribonucleotide metabolic process;5.00424533983164e-09!GO:0022403;cell cycle phase;5.02986474091294e-09!GO:0006164;purine nucleotide biosynthetic process;5.89648512539277e-09!GO:0007067;mitosis;5.89648512539277e-09!GO:0051726;regulation of cell cycle;5.89648512539277e-09!GO:0051169;nuclear transport;5.90054863576576e-09!GO:0000074;regulation of progression through cell cycle;6.25432305402385e-09!GO:0016604;nuclear body;8.30430613939834e-09!GO:0009060;aerobic respiration;8.9877631152504e-09!GO:0009260;ribonucleotide biosynthetic process;8.9877631152504e-09!GO:0006325;establishment and/or maintenance of chromatin architecture;1.01340107705105e-08!GO:0009056;catabolic process;1.05397939286449e-08!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;1.35580917873204e-08!GO:0016491;oxidoreductase activity;1.42822746660494e-08!GO:0009152;purine ribonucleotide biosynthetic process;1.57869743563718e-08!GO:0006333;chromatin assembly or disassembly;2.24887647510766e-08!GO:0016023;cytoplasmic membrane-bound vesicle;2.40723611120988e-08!GO:0031988;membrane-bound vesicle;2.42975889729533e-08!GO:0006888;ER to Golgi vesicle-mediated transport;2.75598474401441e-08!GO:0005525;GTP binding;2.87380981042236e-08!GO:0045333;cellular respiration;3.21862694329946e-08!GO:0006323;DNA packaging;3.23653476430222e-08!GO:0006364;rRNA processing;3.29930309793734e-08!GO:0006334;nucleosome assembly;3.47398837064521e-08!GO:0006281;DNA repair;3.52429939171201e-08!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;4.39500896535449e-08!GO:0048519;negative regulation of biological process;4.9112930902017e-08!GO:0008639;small protein conjugating enzyme activity;4.97552224129898e-08!GO:0006366;transcription from RNA polymerase II promoter;5.30324604904314e-08!GO:0016853;isomerase activity;5.32890742912424e-08!GO:0016072;rRNA metabolic process;6.30938198838774e-08!GO:0009199;ribonucleoside triphosphate metabolic process;6.36546263079384e-08!GO:0009141;nucleoside triphosphate metabolic process;6.58799858632854e-08!GO:0042623;ATPase activity, coupled;6.81349477638653e-08!GO:0065002;intracellular protein transport across a membrane;7.21043810710218e-08!GO:0004842;ubiquitin-protein ligase activity;8.71945283032235e-08!GO:0009719;response to endogenous stimulus;8.75566371128137e-08!GO:0030120;vesicle coat;9.24495279288808e-08!GO:0030662;coated vesicle membrane;9.24495279288808e-08!GO:0016887;ATPase activity;9.66765938144178e-08!GO:0005643;nuclear pore;9.67282748881211e-08!GO:0016879;ligase activity, forming carbon-nitrogen bonds;9.69048173090399e-08!GO:0015986;ATP synthesis coupled proton transport;9.76832528722012e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;9.76832528722012e-08!GO:0044431;Golgi apparatus part;9.76832528722012e-08!GO:0009205;purine ribonucleoside triphosphate metabolic process;9.86100172908732e-08!GO:0009144;purine nucleoside triphosphate metabolic process;9.86100172908732e-08!GO:0019787;small conjugating protein ligase activity;1.12528530960241e-07!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;1.22583869783231e-07!GO:0004812;aminoacyl-tRNA ligase activity;1.22583869783231e-07!GO:0016875;ligase activity, forming carbon-oxygen bonds;1.22583869783231e-07!GO:0017038;protein import;1.37262933505489e-07!GO:0009142;nucleoside triphosphate biosynthetic process;1.37262933505489e-07!GO:0009201;ribonucleoside triphosphate biosynthetic process;1.37262933505489e-07!GO:0031497;chromatin assembly;1.56626437839566e-07!GO:0006099;tricarboxylic acid cycle;1.63730843636916e-07!GO:0046356;acetyl-CoA catabolic process;1.63730843636916e-07!GO:0043038;amino acid activation;1.64470905648801e-07!GO:0006418;tRNA aminoacylation for protein translation;1.64470905648801e-07!GO:0043039;tRNA aminoacylation;1.64470905648801e-07!GO:0051246;regulation of protein metabolic process;1.95213242454565e-07!GO:0030532;small nuclear ribonucleoprotein complex;2.14699643673236e-07!GO:0046930;pore complex;2.17705429385965e-07!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;2.17705429385965e-07!GO:0009145;purine nucleoside triphosphate biosynthetic process;2.17705429385965e-07!GO:0009109;coenzyme catabolic process;2.43042747094404e-07!GO:0032561;guanyl ribonucleotide binding;2.45162566133793e-07!GO:0019001;guanyl nucleotide binding;2.45162566133793e-07!GO:0051187;cofactor catabolic process;2.57502207277761e-07!GO:0051188;cofactor biosynthetic process;3.02839193895786e-07!GO:0005768;endosome;3.63320339513828e-07!GO:0007005;mitochondrion organization and biogenesis;3.81855808423372e-07!GO:0048475;coated membrane;3.92357770953778e-07!GO:0030117;membrane coat;3.92357770953778e-07!GO:0031982;vesicle;4.26519618249731e-07!GO:0000785;chromatin;4.42647917841323e-07!GO:0004386;helicase activity;4.6720552665518e-07!GO:0008026;ATP-dependent helicase activity;4.80868856859057e-07!GO:0006260;DNA replication;4.99439776892767e-07!GO:0031410;cytoplasmic vesicle;5.04482031046824e-07!GO:0006084;acetyl-CoA metabolic process;5.52732169351175e-07!GO:0009117;nucleotide metabolic process;6.08395456830437e-07!GO:0016607;nuclear speck;6.17637071079603e-07!GO:0019829;cation-transporting ATPase activity;8.87492278379262e-07!GO:0050657;nucleic acid transport;8.87492278379262e-07!GO:0051236;establishment of RNA localization;8.87492278379262e-07!GO:0050658;RNA transport;8.87492278379262e-07!GO:0046034;ATP metabolic process;9.61724076143014e-07!GO:0003714;transcription corepressor activity;9.92099488513205e-07!GO:0006403;RNA localization;1.03804570476411e-06!GO:0016740;transferase activity;1.04861531913177e-06!GO:0008654;phospholipid biosynthetic process;1.2937063001881e-06!GO:0016881;acid-amino acid ligase activity;1.31439894068478e-06!GO:0005839;proteasome core complex (sensu Eukaryota);1.44255424260446e-06!GO:0008361;regulation of cell size;1.7158005684158e-06!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;1.85466063218133e-06!GO:0006754;ATP biosynthetic process;1.87385617061439e-06!GO:0006753;nucleoside phosphate metabolic process;1.87385617061439e-06!GO:0042981;regulation of apoptosis;1.87385617061439e-06!GO:0016859;cis-trans isomerase activity;1.91460507120771e-06!GO:0016049;cell growth;1.95138372798086e-06!GO:0043067;regulation of programmed cell death;1.95582316213722e-06!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;2.32814335541698e-06!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;2.52529616159473e-06!GO:0000279;M phase;2.55084040771933e-06!GO:0015078;hydrogen ion transmembrane transporter activity;2.64818299184225e-06!GO:0031252;leading edge;3.11197174302852e-06!GO:0003697;single-stranded DNA binding;4.18554431507114e-06!GO:0043069;negative regulation of programmed cell death;4.33323442488011e-06!GO:0015980;energy derivation by oxidation of organic compounds;4.33963681766637e-06!GO:0050794;regulation of cellular process;4.35666367951854e-06!GO:0043566;structure-specific DNA binding;4.41441418880713e-06!GO:0045259;proton-transporting ATP synthase complex;4.79319952471303e-06!GO:0001558;regulation of cell growth;5.62286561700533e-06!GO:0045786;negative regulation of progression through cell cycle;5.80423488295113e-06!GO:0006752;group transfer coenzyme metabolic process;6.20513976104428e-06!GO:0016469;proton-transporting two-sector ATPase complex;6.42448262779488e-06!GO:0043066;negative regulation of apoptosis;6.43922995800411e-06!GO:0005798;Golgi-associated vesicle;6.58581768027149e-06!GO:0005667;transcription factor complex;6.64957858707565e-06!GO:0006613;cotranslational protein targeting to membrane;7.16831934461525e-06!GO:0006793;phosphorus metabolic process;8.13686735742112e-06!GO:0006796;phosphate metabolic process;8.13686735742112e-06!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;8.14087994948694e-06!GO:0005773;vacuole;1.05289628495703e-05!GO:0006916;anti-apoptosis;1.07139664839233e-05!GO:0004298;threonine endopeptidase activity;1.07177612140735e-05!GO:0016564;transcription repressor activity;1.08142564205636e-05!GO:0044440;endosomal part;1.231362672767e-05!GO:0010008;endosome membrane;1.231362672767e-05!GO:0043623;cellular protein complex assembly;1.25414444606826e-05!GO:0009108;coenzyme biosynthetic process;1.36986584132765e-05!GO:0016310;phosphorylation;1.38082987074809e-05!GO:0000139;Golgi membrane;1.38082987074809e-05!GO:0031324;negative regulation of cellular metabolic process;1.38423144808629e-05!GO:0031968;organelle outer membrane;1.3948556910277e-05!GO:0045454;cell redox homeostasis;1.3948556910277e-05!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;1.43331480561652e-05!GO:0019843;rRNA binding;1.46161900390187e-05!GO:0000245;spliceosome assembly;1.49864077148636e-05!GO:0015630;microtubule cytoskeleton;1.52115923187643e-05!GO:0032446;protein modification by small protein conjugation;1.58730230234523e-05!GO:0006091;generation of precursor metabolites and energy;1.60646798976e-05!GO:0051170;nuclear import;2.09740530479655e-05!GO:0019867;outer membrane;2.13144397244612e-05!GO:0044262;cellular carbohydrate metabolic process;2.15173590607429e-05!GO:0051028;mRNA transport;2.18607897050188e-05!GO:0005762;mitochondrial large ribosomal subunit;2.18743065033719e-05!GO:0000315;organellar large ribosomal subunit;2.18743065033719e-05!GO:0030036;actin cytoskeleton organization and biogenesis;2.45349948728937e-05!GO:0016567;protein ubiquitination;2.5301657026808e-05!GO:0016779;nucleotidyltransferase activity;2.9939494158139e-05!GO:0016787;hydrolase activity;3.38596875626723e-05!GO:0000151;ubiquitin ligase complex;3.39004213924733e-05!GO:0005770;late endosome;3.74538938641986e-05!GO:0000314;organellar small ribosomal subunit;3.75966988986145e-05!GO:0005763;mitochondrial small ribosomal subunit;3.75966988986145e-05!GO:0030867;rough endoplasmic reticulum membrane;4.26866566258785e-05!GO:0031202;RNA splicing factor activity, transesterification mechanism;4.57354873208605e-05!GO:0006606;protein import into nucleus;4.61234069804598e-05!GO:0000786;nucleosome;5.12931430289732e-05!GO:0051329;interphase of mitotic cell cycle;5.23775178576231e-05!GO:0005741;mitochondrial outer membrane;6.05392754109248e-05!GO:0000323;lytic vacuole;7.96695455448471e-05!GO:0005764;lysosome;7.96695455448471e-05!GO:0007249;I-kappaB kinase/NF-kappaB cascade;8.22151667994848e-05!GO:0003724;RNA helicase activity;8.37787354227559e-05!GO:0005852;eukaryotic translation initiation factor 3 complex;9.27010909492016e-05!GO:0030029;actin filament-based process;9.40577711984021e-05!GO:0006612;protein targeting to membrane;0.000101082240106517!GO:0043021;ribonucleoprotein binding;0.000102419997766773!GO:0005769;early endosome;0.000113247451203564!GO:0009892;negative regulation of metabolic process;0.00011538056931097!GO:0008610;lipid biosynthetic process;0.000117621081111065!GO:0030133;transport vesicle;0.000127684691727941!GO:0050789;regulation of biological process;0.000127966341573025!GO:0051325;interphase;0.000129790831583304!GO:0005905;coated pit;0.000134748720334868!GO:0007010;cytoskeleton organization and biogenesis;0.000136453794224297!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.000151927768818317!GO:0046474;glycerophospholipid biosynthetic process;0.000153407831584764!GO:0033116;ER-Golgi intermediate compartment membrane;0.000174756877911951!GO:0019899;enzyme binding;0.00017968837239942!GO:0008092;cytoskeletal protein binding;0.000202510001825864!GO:0016044;membrane organization and biogenesis;0.000230489792251075!GO:0051789;response to protein stimulus;0.00023050814603265!GO:0006986;response to unfolded protein;0.00023050814603265!GO:0005791;rough endoplasmic reticulum;0.000233222978648558!GO:0015077;monovalent inorganic cation transmembrane transporter activity;0.000240212344687606!GO:0051427;hormone receptor binding;0.000258532628336404!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000273536788260662!GO:0009165;nucleotide biosynthetic process;0.000279982984630511!GO:0003713;transcription coactivator activity;0.000327025621651509!GO:0005819;spindle;0.000330142437299431!GO:0016563;transcription activator activity;0.000346200708574217!GO:0005885;Arp2/3 protein complex;0.000347471209014574!GO:0030663;COPI coated vesicle membrane;0.000362656433947759!GO:0030126;COPI vesicle coat;0.000362656433947759!GO:0016568;chromatin modification;0.000364952351673869!GO:0048522;positive regulation of cellular process;0.000368106825498105!GO:0008250;oligosaccharyl transferase complex;0.000388221645720343!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00038863586628579!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.000398921939698791!GO:0016126;sterol biosynthetic process;0.00040252263670884!GO:0046467;membrane lipid biosynthetic process;0.000409339984906661!GO:0005813;centrosome;0.000409339984906661!GO:0040008;regulation of growth;0.000411236150547735!GO:0035257;nuclear hormone receptor binding;0.000486411104188756!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.000486411104188756!GO:0051087;chaperone binding;0.000537377828513128!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.0005447841917023!GO:0043681;protein import into mitochondrion;0.000552313733163342!GO:0005048;signal sequence binding;0.000581134968677093!GO:0006626;protein targeting to mitochondrion;0.000592958851153503!GO:0003899;DNA-directed RNA polymerase activity;0.000593391519922647!GO:0004576;oligosaccharyl transferase activity;0.00061035154156629!GO:0006082;organic acid metabolic process;0.000660673722322742!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000698282759567605!GO:0005815;microtubule organizing center;0.000723277020184373!GO:0051920;peroxiredoxin activity;0.000735854630457717!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000740801201276457!GO:0019752;carboxylic acid metabolic process;0.00074100954446569!GO:0008186;RNA-dependent ATPase activity;0.00079673651666303!GO:0018196;peptidyl-asparagine modification;0.000804752497300605!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.000804752497300605!GO:0006839;mitochondrial transport;0.000877078259477912!GO:0016481;negative regulation of transcription;0.000927865809068104!GO:0030137;COPI-coated vesicle;0.000973583507180181!GO:0007050;cell cycle arrest;0.000974226920338912!GO:0042802;identical protein binding;0.00102926293978472!GO:0007051;spindle organization and biogenesis;0.00110578445773664!GO:0030176;integral to endoplasmic reticulum membrane;0.00117030707617696!GO:0007264;small GTPase mediated signal transduction;0.00119354065115053!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00124266015074156!GO:0007006;mitochondrial membrane organization and biogenesis;0.00141070332634239!GO:0046489;phosphoinositide biosynthetic process;0.00159598874565712!GO:0051252;regulation of RNA metabolic process;0.00162440205943494!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00163298601449341!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00163298601449341!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00163298601449341!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00174183531135296!GO:0051045;negative regulation of membrane protein ectodomain proteolysis;0.00181469879207436!GO:0051043;regulation of membrane protein ectodomain proteolysis;0.00181469879207436!GO:0048471;perinuclear region of cytoplasm;0.0018190350745648!GO:0051168;nuclear export;0.00190572363249663!GO:0043284;biopolymer biosynthetic process;0.00191841914709134!GO:0004004;ATP-dependent RNA helicase activity;0.00194099539032878!GO:0030027;lamellipodium;0.00194099539032878!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.0019568208071369!GO:0016706;oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;0.00197779047585695!GO:0043488;regulation of mRNA stability;0.00197813355971763!GO:0043487;regulation of RNA stability;0.00197813355971763!GO:0048500;signal recognition particle;0.00205133819716241!GO:0030041;actin filament polymerization;0.0023084792232316!GO:0003690;double-stranded DNA binding;0.00231303804510761!GO:0031072;heat shock protein binding;0.00249341234303974!GO:0003729;mRNA binding;0.00253929785385683!GO:0016363;nuclear matrix;0.00258843475793055!GO:0006509;membrane protein ectodomain proteolysis;0.00258843475793055!GO:0033619;membrane protein proteolysis;0.00258843475793055!GO:0006414;translational elongation;0.00259723738348022!GO:0048487;beta-tubulin binding;0.00289749961377705!GO:0006695;cholesterol biosynthetic process;0.00289749961377705!GO:0007243;protein kinase cascade;0.00293181502128351!GO:0008180;signalosome;0.00297926595659605!GO:0006383;transcription from RNA polymerase III promoter;0.00300775733233433!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.00309879518477545!GO:0030134;ER to Golgi transport vesicle;0.00311827037719728!GO:0006650;glycerophospholipid metabolic process;0.00327366297553648!GO:0044452;nucleolar part;0.0033211482493728!GO:0031418;L-ascorbic acid binding;0.00346980477555088!GO:0006740;NADPH regeneration;0.00350728268918816!GO:0006098;pentose-phosphate shunt;0.00350728268918816!GO:0030658;transport vesicle membrane;0.00352050787059037!GO:0016860;intramolecular oxidoreductase activity;0.00367858917548345!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.00369011353341213!GO:0030659;cytoplasmic vesicle membrane;0.00391787412889214!GO:0006891;intra-Golgi vesicle-mediated transport;0.00398114940041523!GO:0006950;response to stress;0.004050124021223!GO:0000049;tRNA binding;0.00405567157056965!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00425184669365825!GO:0015002;heme-copper terminal oxidase activity;0.00425184669365825!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00425184669365825!GO:0004129;cytochrome-c oxidase activity;0.00425184669365825!GO:0031543;peptidyl-proline dioxygenase activity;0.00442806821876802!GO:0004177;aminopeptidase activity;0.00446017146127869!GO:0015631;tubulin binding;0.00446876296411706!GO:0008033;tRNA processing;0.00448636748068329!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00460003652812685!GO:0045047;protein targeting to ER;0.00460003652812685!GO:0051101;regulation of DNA binding;0.00473133385711549!GO:0016197;endosome transport;0.00497063485630368!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.00498251740008511!GO:0065009;regulation of a molecular function;0.00499603496374823!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00513832095479384!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.00529894742488155!GO:0035258;steroid hormone receptor binding;0.00540770158765383!GO:0030118;clathrin coat;0.00547090902740062!GO:0030521;androgen receptor signaling pathway;0.00551035379898685!GO:0000082;G1/S transition of mitotic cell cycle;0.00553341396960829!GO:0008312;7S RNA binding;0.00553429010315141!GO:0008652;amino acid biosynthetic process;0.00553429010315141!GO:0006007;glucose catabolic process;0.00562862340003049!GO:0008632;apoptotic program;0.00563488202561483!GO:0030132;clathrin coat of coated pit;0.00588857527788642!GO:0000059;protein import into nucleus, docking;0.00596166053372837!GO:0017166;vinculin binding;0.00597436388580834!GO:0030127;COPII vesicle coat;0.00614601897620584!GO:0012507;ER to Golgi transport vesicle membrane;0.00614601897620584!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.00618571552440287!GO:0031901;early endosome membrane;0.00645675100833806!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.00646260875423494!GO:0051287;NAD binding;0.00649554745640366!GO:0006979;response to oxidative stress;0.00662738199285699!GO:0006520;amino acid metabolic process;0.0070316197999869!GO:0005684;U2-dependent spliceosome;0.00747764479950008!GO:0003711;transcription elongation regulator activity;0.007541424561174!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00756519391741!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00756519391741!GO:0030880;RNA polymerase complex;0.00767237719540873!GO:0030384;phosphoinositide metabolic process;0.00773612366233142!GO:0044433;cytoplasmic vesicle part;0.00773612366233142!GO:0045792;negative regulation of cell size;0.00796946906458213!GO:0046483;heterocycle metabolic process;0.00802517010537155!GO:0005869;dynactin complex;0.00818401357970834!GO:0030308;negative regulation of cell growth;0.00825885046417636!GO:0000096;sulfur amino acid metabolic process;0.00839405763021004!GO:0030660;Golgi-associated vesicle membrane;0.00857490004386!GO:0008139;nuclear localization sequence binding;0.00861096387940043!GO:0006720;isoprenoid metabolic process;0.00889403976153527!GO:0006402;mRNA catabolic process;0.00909310027414124!GO:0001726;ruffle;0.0092498894995504!GO:0048468;cell development;0.00942677704053932!GO:0006739;NADP metabolic process;0.00942677704053932!GO:0019798;procollagen-proline dioxygenase activity;0.00946636464061963!GO:0048518;positive regulation of biological process;0.00982284950441779!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.00987116543807231!GO:0015399;primary active transmembrane transporter activity;0.00987116543807231!GO:0005637;nuclear inner membrane;0.010033585957202!GO:0006897;endocytosis;0.010190102954293!GO:0010324;membrane invagination;0.010190102954293!GO:0005862;muscle thin filament tropomyosin;0.010427172949098!GO:0008320;protein transmembrane transporter activity;0.0104571396263809!GO:0031124;mRNA 3'-end processing;0.0104760806656298!GO:0012506;vesicle membrane;0.0104896085393198!GO:0003746;translation elongation factor activity;0.0106040649200644!GO:0006066;alcohol metabolic process;0.0106873769661402!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0107530873410461!GO:0019318;hexose metabolic process;0.0110645852307766!GO:0051098;regulation of binding;0.0113102733488703!GO:0016272;prefoldin complex;0.011386352093056!GO:0051270;regulation of cell motility;0.0116711651134976!GO:0030833;regulation of actin filament polymerization;0.0117859800714634!GO:0016408;C-acyltransferase activity;0.0117943453662517!GO:0001666;response to hypoxia;0.0121032087376972!GO:0051128;regulation of cellular component organization and biogenesis;0.012157991003211!GO:0008154;actin polymerization and/or depolymerization;0.012157991003211!GO:0006595;polyamine metabolic process;0.012168336988776!GO:0006144;purine base metabolic process;0.012168336988776!GO:0043022;ribosome binding;0.0123528663267319!GO:0050662;coenzyme binding;0.0124149394864306!GO:0006401;RNA catabolic process;0.012578482430838!GO:0065007;biological regulation;0.012578482430838!GO:0003756;protein disulfide isomerase activity;0.0130512203882159!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0130512203882159!GO:0033673;negative regulation of kinase activity;0.013204235871169!GO:0006469;negative regulation of protein kinase activity;0.013204235871169!GO:0005996;monosaccharide metabolic process;0.0133821507641874!GO:0005832;chaperonin-containing T-complex;0.0138886998633131!GO:0045892;negative regulation of transcription, DNA-dependent;0.0142598264716463!GO:0000339;RNA cap binding;0.014415476713494!GO:0005975;carbohydrate metabolic process;0.0145762206851419!GO:0051540;metal cluster binding;0.0150250322803064!GO:0051536;iron-sulfur cluster binding;0.0150250322803064!GO:0006261;DNA-dependent DNA replication;0.0155981613557414!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.0156760928519423!GO:0000428;DNA-directed RNA polymerase complex;0.0156760928519423!GO:0007040;lysosome organization and biogenesis;0.0157181885319254!GO:0017015;regulation of transforming growth factor beta receptor signaling pathway;0.0158666551656233!GO:0030145;manganese ion binding;0.0160209990626126!GO:0031272;regulation of pseudopodium formation;0.0170381523030614!GO:0031269;pseudopodium formation;0.0170381523030614!GO:0031344;regulation of cell projection organization and biogenesis;0.0170381523030614!GO:0031268;pseudopodium organization and biogenesis;0.0170381523030614!GO:0031346;positive regulation of cell projection organization and biogenesis;0.0170381523030614!GO:0031274;positive regulation of pseudopodium formation;0.0170381523030614!GO:0006643;membrane lipid metabolic process;0.0176455028657237!GO:0000075;cell cycle checkpoint;0.0178698802691495!GO:0015992;proton transport;0.0179087619949882!GO:0006302;double-strand break repair;0.0179677200580885!GO:0006352;transcription initiation;0.0179821746439911!GO:0031902;late endosome membrane;0.0184633495046285!GO:0006417;regulation of translation;0.0185558117608498!GO:0006818;hydrogen transport;0.0187750778809398!GO:0006506;GPI anchor biosynthetic process;0.0187826826999542!GO:0007052;mitotic spindle organization and biogenesis;0.0187985003646242!GO:0009112;nucleobase metabolic process;0.0188501736675918!GO:0031123;RNA 3'-end processing;0.019116381210112!GO:0006518;peptide metabolic process;0.0191790046943914!GO:0008637;apoptotic mitochondrial changes;0.0192114640987812!GO:0000776;kinetochore;0.0197122970333934!GO:0006497;protein amino acid lipidation;0.0198702817072524!GO:0032984;macromolecular complex disassembly;0.0199194203849285!GO:0051348;negative regulation of transferase activity;0.0199975219773232!GO:0016125;sterol metabolic process;0.0210658129667955!GO:0050681;androgen receptor binding;0.0213253184997138!GO:0044255;cellular lipid metabolic process;0.0214035418676187!GO:0042158;lipoprotein biosynthetic process;0.0218575753779684!GO:0006505;GPI anchor metabolic process;0.0219096374056452!GO:0006778;porphyrin metabolic process;0.0220720371422166!GO:0033013;tetrapyrrole metabolic process;0.0220720371422166!GO:0051539;4 iron, 4 sulfur cluster binding;0.0221272179761241!GO:0007033;vacuole organization and biogenesis;0.0221897427820863!GO:0045045;secretory pathway;0.0225777660544083!GO:0008047;enzyme activator activity;0.0229501233041803!GO:0030119;AP-type membrane coat adaptor complex;0.0236521933789452!GO:0000775;chromosome, pericentric region;0.0243312777094166!GO:0008147;structural constituent of bone;0.0244419307622408!GO:0003684;damaged DNA binding;0.0246447057618862!GO:0031529;ruffle organization and biogenesis;0.0247079136394002!GO:0043433;negative regulation of transcription factor activity;0.0247415949035514!GO:0009303;rRNA transcription;0.0247415949035514!GO:0005801;cis-Golgi network;0.025217664614341!GO:0009967;positive regulation of signal transduction;0.0252799351640395!GO:0005657;replication fork;0.0256694100807531!GO:0016251;general RNA polymerase II transcription factor activity;0.0257551741727627!GO:0031301;integral to organelle membrane;0.0262488674614283!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.0263698728696248!GO:0030032;lamellipodium biogenesis;0.0266277079316192!GO:0016584;nucleosome positioning;0.0269098446285618!GO:0033559;unsaturated fatty acid metabolic process;0.0269098446285618!GO:0006636;unsaturated fatty acid biosynthetic process;0.0269098446285618!GO:0008094;DNA-dependent ATPase activity;0.0270291197943221!GO:0006405;RNA export from nucleus;0.0277970221240567!GO:0007021;tubulin folding;0.0281156694820978!GO:0030518;steroid hormone receptor signaling pathway;0.0282514116274897!GO:0005581;collagen;0.0286805733469557!GO:0022890;inorganic cation transmembrane transporter activity;0.0288114362071281!GO:0030865;cortical cytoskeleton organization and biogenesis;0.0295469624629113!GO:0031227;intrinsic to endoplasmic reticulum membrane;0.0297163261957817!GO:0005586;collagen type III;0.029760002056613!GO:0006892;post-Golgi vesicle-mediated transport;0.0300239051795689!GO:0006611;protein export from nucleus;0.0302843276289396!GO:0005100;Rho GTPase activator activity;0.0302843276289396!GO:0003678;DNA helicase activity;0.0316311929481786!GO:0022884;macromolecule transmembrane transporter activity;0.0316448049276657!GO:0015450;P-P-bond-hydrolysis-driven protein transmembrane transporter activity;0.0316448049276657!GO:0031625;ubiquitin protein ligase binding;0.0319692847286821!GO:0015036;disulfide oxidoreductase activity;0.0319692847286821!GO:0030125;clathrin vesicle coat;0.0319692847286821!GO:0030665;clathrin coated vesicle membrane;0.0319692847286821!GO:0004656;procollagen-proline 4-dioxygenase activity;0.0319843770881311!GO:0031545;peptidyl-proline 4-dioxygenase activity;0.0319843770881311!GO:0006289;nucleotide-excision repair;0.0320713638405223!GO:0031970;organelle envelope lumen;0.0322241585393973!GO:0040011;locomotion;0.032331288252629!GO:0006378;mRNA polyadenylation;0.0325159334730175!GO:0006118;electron transport;0.0325848255312406!GO:0016407;acetyltransferase activity;0.032629548112369!GO:0043241;protein complex disassembly;0.0327728050990507!GO:0051493;regulation of cytoskeleton organization and biogenesis;0.0330564467214217!GO:0033043;regulation of organelle organization and biogenesis;0.0330564467214217!GO:0008097;5S rRNA binding;0.0331988120138837!GO:0005774;vacuolar membrane;0.0332372956438811!GO:0045185;maintenance of protein localization;0.0335828204287031!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.0335828204287031!GO:0008538;proteasome activator activity;0.0338100728977702!GO:0045941;positive regulation of transcription;0.0338977021222294!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.033953211541426!GO:0051235;maintenance of localization;0.0343773872714407!GO:0003779;actin binding;0.0350241084963403!GO:0050811;GABA receptor binding;0.0350477459105802!GO:0006807;nitrogen compound metabolic process;0.0350477459105802!GO:0005850;eukaryotic translation initiation factor 2 complex;0.0352218648835224!GO:0006779;porphyrin biosynthetic process;0.0352218648835224!GO:0033014;tetrapyrrole biosynthetic process;0.0352218648835224!GO:0045893;positive regulation of transcription, DNA-dependent;0.0352755035923775!GO:0031371;ubiquitin conjugating enzyme complex;0.035353516255678!GO:0047485;protein N-terminus binding;0.035353516255678!GO:0007034;vacuolar transport;0.0355144861125384!GO:0005784;translocon complex;0.0358580031163435!GO:0004448;isocitrate dehydrogenase activity;0.0359412146846889!GO:0003682;chromatin binding;0.0362932184444434!GO:0000209;protein polyubiquitination;0.0363640676954123!GO:0035035;histone acetyltransferase binding;0.036791880268404!GO:0009081;branched chain family amino acid metabolic process;0.0368696365458974!GO:0003923;GPI-anchor transamidase activity;0.0371020764431594!GO:0016255;attachment of GPI anchor to protein;0.0371020764431594!GO:0042765;GPI-anchor transamidase complex;0.0371020764431594!GO:0046365;monosaccharide catabolic process;0.037760849648843!GO:0005583;fibrillar collagen;0.0379943696638828!GO:0005092;GDP-dissociation inhibitor activity;0.0385169400101772!GO:0001725;stress fiber;0.0385189658235455!GO:0032432;actin filament bundle;0.0385189658235455!GO:0000097;sulfur amino acid biosynthetic process;0.0385507823665362!GO:0005874;microtubule;0.0385936339366638!GO:0008022;protein C-terminus binding;0.0387381730046945!GO:0008283;cell proliferation;0.0389875519817931!GO:0030131;clathrin adaptor complex;0.0392683010035862!GO:0005758;mitochondrial intermembrane space;0.0393546297659869!GO:0006354;RNA elongation;0.0394515299113316!GO:0040012;regulation of locomotion;0.0396052340431043!GO:0032507;maintenance of cellular protein localization;0.0396052340431043!GO:0009116;nucleoside metabolic process;0.0399545152825673!GO:0048037;cofactor binding;0.0399972256460746!GO:0007179;transforming growth factor beta receptor signaling pathway;0.0399984003063816!GO:0043065;positive regulation of apoptosis;0.0404254952744279!GO:0006790;sulfur metabolic process;0.0405608980400885!GO:0008234;cysteine-type peptidase activity;0.0412643484761421!GO:0008475;procollagen-lysine 5-dioxygenase activity;0.0420132894564338!GO:0030508;thiol-disulfide exchange intermediate activity;0.0424003170389516!GO:0045926;negative regulation of growth;0.0426345361328728!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0435305399925291!GO:0000902;cell morphogenesis;0.043568545772029!GO:0032989;cellular structure morphogenesis;0.043568545772029!GO:0019222;regulation of metabolic process;0.0439910389775042!GO:0042168;heme metabolic process;0.0441938605208509!GO:0030433;ER-associated protein catabolic process;0.0442746586253064!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.0442746586253064!GO:0008168;methyltransferase activity;0.0443171650722211!GO:0030100;regulation of endocytosis;0.0446064316540315!GO:0006769;nicotinamide metabolic process;0.0447068601183161!GO:0005669;transcription factor TFIID complex;0.045136982600628!GO:0043068;positive regulation of programmed cell death;0.0454168928572229!GO:0009308;amine metabolic process;0.0461853327718779!GO:0009889;regulation of biosynthetic process;0.0462223098222503!GO:0006096;glycolysis;0.0466477123436113!GO:0009003;signal peptidase activity;0.0471727528409067!GO:0050178;phenylpyruvate tautomerase activity;0.0474296275201253!GO:0006220;pyrimidine nucleotide metabolic process;0.0475100617255237!GO:0006644;phospholipid metabolic process;0.0478453257396678!GO:0048144;fibroblast proliferation;0.0478677526803351!GO:0048145;regulation of fibroblast proliferation;0.0478677526803351!GO:0043624;cellular protein complex disassembly;0.0478680238124653!GO:0030911;TPR domain binding;0.0485627256962778!GO:0022411;cellular component disassembly;0.0486593947616806!GO:0006607;NLS-bearing substrate import into nucleus;0.0497231421026763!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0498491313416318 | |||
|sample_id=11686 | |sample_id=11686 | ||
|sample_note= | |sample_note= | ||
| Line 76: | Line 100: | ||
|sample_tissue=heart | |sample_tissue=heart | ||
|top_motifs=HIF1A:2.23764739609;HOX{A5,B5}:1.45841350037;TFAP4:1.39019422915;IKZF1:1.35746156547;NKX3-1:1.2525265895;MYBL2:1.12949103599;TLX1..3_NFIC{dimer}:1.11059038874;TEAD1:1.03645375579;EN1,2:1.01988538455;SRF:0.99707103709;TAL1_TCF{3,4,12}:0.97549449266;GLI1..3:0.964667518831;ZNF238:0.865746097967;HMGA1,2:0.81645923242;NR3C1:0.81366560545;RXRA_VDR{dimer}:0.803881700575;EBF1:0.791527816904;HSF1,2:0.778382128741;SOX17:0.766550645124;ZNF423:0.765621329105;GTF2A1,2:0.755121265229;LHX3,4:0.750247040806;TBP:0.739354277998;GCM1,2:0.732934086647;NFATC1..3:0.695296166325;XBP1:0.68250814845;NANOG:0.662210001451;FOX{I1,J2}:0.65808916238;NR5A1,2:0.61587799882;ZNF148:0.604462277278;GATA6:0.600590350038;PAX5:0.572698485835;SMAD1..7,9:0.571134437196;HES1:0.570210122205;MAZ:0.543643456364;GTF2I:0.539087081276;XCPE1{core}:0.533263277817;CRX:0.529684251766;MTE{core}:0.528153856433;PPARG:0.523129333256;PATZ1:0.522568165372;ZNF384:0.506499287451;HAND1,2:0.499115875137;ALX4:0.495088557412;FOXM1:0.470044474488;FOXL1:0.466139702386;AR:0.427636689457;ADNP_IRX_SIX_ZHX:0.422119895731;SOX5:0.410007472592;ZIC1..3:0.409919585959;FOXA2:0.399198660215;PAX6:0.383085635077;NR6A1:0.378500602018;RXR{A,B,G}:0.377404827827;NKX2-2,8:0.374077382887;TEF:0.359189709118;MAFB:0.34123468125;GFI1B:0.337051653359;ESRRA:0.328433153125;CEBPA,B_DDIT3:0.319691102332;LEF1_TCF7_TCF7L1,2:0.310576137325;TP53:0.284878222833;TBX4,5:0.284471293658;PAX1,9:0.276750274742;POU5F1:0.269822552624;SPZ1:0.267106531284;CDC5L:0.26332674959;NFY{A,B,C}:0.251232985999;UFEwm:0.248130052843;MEF2{A,B,C,D}:0.242417645296;SP1:0.231413234531;STAT5{A,B}:0.231342942145;NFE2L1:0.229497240083;NKX3-2:0.184179952626;NFIX:0.183567666179;HNF1A:0.174030864222;HIC1:0.171239428382;REST:0.168782724696;ATF6:0.15854257043;NHLH1,2:0.132391912613;HLF:0.128571341074;EVI1:0.110892359777;HNF4A_NR2F1,2:0.0883266973034;HOX{A6,A7,B6,B7}:0.0879834421477;AHR_ARNT_ARNT2:0.0845245056877;TFCP2:0.0775391388541;SOX{8,9,10}:0.0756100922192;RBPJ:0.0617535678026;PAX8:0.0602182502352;FOX{F1,F2,J1}:0.0564759292458;E2F1..5:0.0466927876936;STAT1,3:0.0407029608607;NKX2-1,4:0.0396558956737;KLF4:0.0391729215237;FOXP3:0.0249808823328;FOXQ1:0.0108884050466;NFE2L2:0.00888703987988;MYFfamily:0.00449435606826;ZNF143:-9.64769813367e-05;PBX1:-0.00304144275191;HMX1:-0.0162657947676;PAX4:-0.0194938422408;NFIL3:-0.0282163533489;MYB:-0.0284483562384;SOX2:-0.0294528101799;STAT2,4,6:-0.0344012714957;TOPORS:-0.0653439481017;GFI1:-0.0683288178303;PRDM1:-0.0741041129867;GZF1:-0.0755579841649;TFAP2B:-0.0989291278052;EGR1..3:-0.0994182718643;AIRE:-0.121008209016;ZFP161:-0.121915854413;CDX1,2,4:-0.123541320512;MZF1:-0.126539410583;NANOG{mouse}:-0.136365212016;TFDP1:-0.165291792987;PRRX1,2:-0.166760901587;ATF2:-0.171617863347;FOS_FOS{B,L1}_JUN{B,D}:-0.171852068863;VSX1,2:-0.187232720627;ZBTB6:-0.198998377072;NFE2:-0.20184527491;JUN:-0.203470962867;HOX{A4,D4}:-0.207194257107;bHLH_family:-0.21584167621;NFKB1_REL_RELA:-0.221480653026;RREB1:-0.222239054941;ELF1,2,4:-0.225587050406;GATA4:-0.228676147827;EP300:-0.231909781084;POU1F1:-0.239147043277;ETS1,2:-0.240942765503;POU3F1..4:-0.241394104808;ALX1:-0.242825937732;ONECUT1,2:-0.251714395801;RFX1:-0.259707289464;FOSL2:-0.260632781173;HBP1_HMGB_SSRP1_UBTF:-0.279569816756;TFAP2{A,C}:-0.285857397033;HOXA9_MEIS1:-0.289469540928;RORA:-0.293559168863;LMO2:-0.298533229805;NR1H4:-0.298747143778;MED-1{core}:-0.304026497117;ELK1,4_GABP{A,B1}:-0.313556154833;PAX3,7:-0.317895535717;SPIB:-0.330563188028;ARID5B:-0.338041691129;OCT4_SOX2{dimer}:-0.34443152254;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.350232819482;NRF1:-0.352409583031;DBP:-0.3564803276;ATF4:-0.361362767341;CUX2:-0.367606362792;IRF1,2:-0.381052511078;BACH2:-0.381509641046;PAX2:-0.398571774;IRF7:-0.400686216229;ESR1:-0.405637321319;FOXD3:-0.420385018296;BREu{core}:-0.429857678848;FOX{D1,D2}:-0.432997264497;MTF1:-0.436771310323;RUNX1..3:-0.44001764712;T:-0.445482396603;SPI1:-0.465392432215;NKX2-3_NKX2-5:-0.552607141544;FOXO1,3,4:-0.554641019496;MYOD1:-0.58452273237;YY1:-0.624218722438;POU2F1..3:-0.625346407575;ZEB1:-0.659708187571;PDX1:-0.662692732641;POU6F1:-0.667679646751;SNAI1..3:-0.678175655755;TGIF1:-0.679704836017;ATF5_CREB3:-0.733291999502;PITX1..3:-0.754442381989;CREB1:-0.812122867557;DMAP1_NCOR{1,2}_SMARC:-0.816379246317;SREBF1,2:-0.835720706824;FOXN1:-0.835863367029;BPTF:-0.906149821106;FOXP1:-0.926651408875;IKZF2:-0.936827634083;ZBTB16:-0.949721726849;NKX6-1,2:-1.04407149895;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-1.07038710708;TLX2:-1.26256448468;RFX2..5_RFXANK_RFXAP:-1.40971450932 | |top_motifs=HIF1A:2.23764739609;HOX{A5,B5}:1.45841350037;TFAP4:1.39019422915;IKZF1:1.35746156547;NKX3-1:1.2525265895;MYBL2:1.12949103599;TLX1..3_NFIC{dimer}:1.11059038874;TEAD1:1.03645375579;EN1,2:1.01988538455;SRF:0.99707103709;TAL1_TCF{3,4,12}:0.97549449266;GLI1..3:0.964667518831;ZNF238:0.865746097967;HMGA1,2:0.81645923242;NR3C1:0.81366560545;RXRA_VDR{dimer}:0.803881700575;EBF1:0.791527816904;HSF1,2:0.778382128741;SOX17:0.766550645124;ZNF423:0.765621329105;GTF2A1,2:0.755121265229;LHX3,4:0.750247040806;TBP:0.739354277998;GCM1,2:0.732934086647;NFATC1..3:0.695296166325;XBP1:0.68250814845;NANOG:0.662210001451;FOX{I1,J2}:0.65808916238;NR5A1,2:0.61587799882;ZNF148:0.604462277278;GATA6:0.600590350038;PAX5:0.572698485835;SMAD1..7,9:0.571134437196;HES1:0.570210122205;MAZ:0.543643456364;GTF2I:0.539087081276;XCPE1{core}:0.533263277817;CRX:0.529684251766;MTE{core}:0.528153856433;PPARG:0.523129333256;PATZ1:0.522568165372;ZNF384:0.506499287451;HAND1,2:0.499115875137;ALX4:0.495088557412;FOXM1:0.470044474488;FOXL1:0.466139702386;AR:0.427636689457;ADNP_IRX_SIX_ZHX:0.422119895731;SOX5:0.410007472592;ZIC1..3:0.409919585959;FOXA2:0.399198660215;PAX6:0.383085635077;NR6A1:0.378500602018;RXR{A,B,G}:0.377404827827;NKX2-2,8:0.374077382887;TEF:0.359189709118;MAFB:0.34123468125;GFI1B:0.337051653359;ESRRA:0.328433153125;CEBPA,B_DDIT3:0.319691102332;LEF1_TCF7_TCF7L1,2:0.310576137325;TP53:0.284878222833;TBX4,5:0.284471293658;PAX1,9:0.276750274742;POU5F1:0.269822552624;SPZ1:0.267106531284;CDC5L:0.26332674959;NFY{A,B,C}:0.251232985999;UFEwm:0.248130052843;MEF2{A,B,C,D}:0.242417645296;SP1:0.231413234531;STAT5{A,B}:0.231342942145;NFE2L1:0.229497240083;NKX3-2:0.184179952626;NFIX:0.183567666179;HNF1A:0.174030864222;HIC1:0.171239428382;REST:0.168782724696;ATF6:0.15854257043;NHLH1,2:0.132391912613;HLF:0.128571341074;EVI1:0.110892359777;HNF4A_NR2F1,2:0.0883266973034;HOX{A6,A7,B6,B7}:0.0879834421477;AHR_ARNT_ARNT2:0.0845245056877;TFCP2:0.0775391388541;SOX{8,9,10}:0.0756100922192;RBPJ:0.0617535678026;PAX8:0.0602182502352;FOX{F1,F2,J1}:0.0564759292458;E2F1..5:0.0466927876936;STAT1,3:0.0407029608607;NKX2-1,4:0.0396558956737;KLF4:0.0391729215237;FOXP3:0.0249808823328;FOXQ1:0.0108884050466;NFE2L2:0.00888703987988;MYFfamily:0.00449435606826;ZNF143:-9.64769813367e-05;PBX1:-0.00304144275191;HMX1:-0.0162657947676;PAX4:-0.0194938422408;NFIL3:-0.0282163533489;MYB:-0.0284483562384;SOX2:-0.0294528101799;STAT2,4,6:-0.0344012714957;TOPORS:-0.0653439481017;GFI1:-0.0683288178303;PRDM1:-0.0741041129867;GZF1:-0.0755579841649;TFAP2B:-0.0989291278052;EGR1..3:-0.0994182718643;AIRE:-0.121008209016;ZFP161:-0.121915854413;CDX1,2,4:-0.123541320512;MZF1:-0.126539410583;NANOG{mouse}:-0.136365212016;TFDP1:-0.165291792987;PRRX1,2:-0.166760901587;ATF2:-0.171617863347;FOS_FOS{B,L1}_JUN{B,D}:-0.171852068863;VSX1,2:-0.187232720627;ZBTB6:-0.198998377072;NFE2:-0.20184527491;JUN:-0.203470962867;HOX{A4,D4}:-0.207194257107;bHLH_family:-0.21584167621;NFKB1_REL_RELA:-0.221480653026;RREB1:-0.222239054941;ELF1,2,4:-0.225587050406;GATA4:-0.228676147827;EP300:-0.231909781084;POU1F1:-0.239147043277;ETS1,2:-0.240942765503;POU3F1..4:-0.241394104808;ALX1:-0.242825937732;ONECUT1,2:-0.251714395801;RFX1:-0.259707289464;FOSL2:-0.260632781173;HBP1_HMGB_SSRP1_UBTF:-0.279569816756;TFAP2{A,C}:-0.285857397033;HOXA9_MEIS1:-0.289469540928;RORA:-0.293559168863;LMO2:-0.298533229805;NR1H4:-0.298747143778;MED-1{core}:-0.304026497117;ELK1,4_GABP{A,B1}:-0.313556154833;PAX3,7:-0.317895535717;SPIB:-0.330563188028;ARID5B:-0.338041691129;OCT4_SOX2{dimer}:-0.34443152254;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.350232819482;NRF1:-0.352409583031;DBP:-0.3564803276;ATF4:-0.361362767341;CUX2:-0.367606362792;IRF1,2:-0.381052511078;BACH2:-0.381509641046;PAX2:-0.398571774;IRF7:-0.400686216229;ESR1:-0.405637321319;FOXD3:-0.420385018296;BREu{core}:-0.429857678848;FOX{D1,D2}:-0.432997264497;MTF1:-0.436771310323;RUNX1..3:-0.44001764712;T:-0.445482396603;SPI1:-0.465392432215;NKX2-3_NKX2-5:-0.552607141544;FOXO1,3,4:-0.554641019496;MYOD1:-0.58452273237;YY1:-0.624218722438;POU2F1..3:-0.625346407575;ZEB1:-0.659708187571;PDX1:-0.662692732641;POU6F1:-0.667679646751;SNAI1..3:-0.678175655755;TGIF1:-0.679704836017;ATF5_CREB3:-0.733291999502;PITX1..3:-0.754442381989;CREB1:-0.812122867557;DMAP1_NCOR{1,2}_SMARC:-0.816379246317;SREBF1,2:-0.835720706824;FOXN1:-0.835863367029;BPTF:-0.906149821106;FOXP1:-0.926651408875;IKZF2:-0.936827634083;ZBTB16:-0.949721726849;NKX6-1,2:-1.04407149895;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-1.07038710708;TLX2:-1.26256448468;RFX2..5_RFXANK_RFXAP:-1.40971450932 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11686-122I3;search_select_hide=table117:FF:11686-122I3 | |||
}} | }} | ||
Latest revision as of 18:14, 4 June 2020
| Name: | Cardiac Myocyte, donor3 |
|---|---|
| Species: | Human (Homo sapiens) |
| Library ID: | CNhs12571 |
| Sample type: | primary cells |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| FANTOM CAT: | 1, 2, 3, 4, 5, 6, 7, 8, 9 |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
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Sample information
RNA information
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| Download raw sequence, BAM & CTSS | ||||||||||||||
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12571
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12571
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.584 |
| 10 | 10 | 0.00917 |
| 100 | 100 | 0.859 |
| 101 | 101 | 0.751 |
| 102 | 102 | 0.165 |
| 103 | 103 | 0.433 |
| 104 | 104 | 0.298 |
| 105 | 105 | 0.596 |
| 106 | 106 | 0.4 |
| 107 | 107 | 0.0433 |
| 108 | 108 | 0.622 |
| 109 | 109 | 0.855 |
| 11 | 11 | 0.887 |
| 110 | 110 | 0.949 |
| 111 | 111 | 0.0378 |
| 112 | 112 | 0.467 |
| 113 | 113 | 0.0782 |
| 114 | 114 | 0.406 |
| 115 | 115 | 0.815 |
| 116 | 116 | 0.264 |
| 117 | 117 | 0.0122 |
| 118 | 118 | 0.801 |
| 119 | 119 | 0.682 |
| 12 | 12 | 0.693 |
| 120 | 120 | 0.59 |
| 121 | 121 | 0.777 |
| 122 | 122 | 0.964 |
| 123 | 123 | 2.43847e-4 |
| 124 | 124 | 0.985 |
| 125 | 125 | 0.519 |
| 126 | 126 | 0.859 |
| 127 | 127 | 0.775 |
| 128 | 128 | 0.304 |
| 129 | 129 | 0.722 |
| 13 | 13 | 0.584 |
| 130 | 130 | 0.0397 |
| 131 | 131 | 0.183 |
| 132 | 132 | 0.343 |
| 133 | 133 | 0.933 |
| 134 | 134 | 0.118 |
| 135 | 135 | 0.138 |
| 136 | 136 | 0.695 |
| 137 | 137 | 0.162 |
| 138 | 138 | 0.144 |
| 139 | 139 | 0.0691 |
| 14 | 14 | 0.254 |
| 140 | 140 | 0.267 |
| 141 | 141 | 0.876 |
| 142 | 142 | 0.872 |
| 143 | 143 | 0.623 |
| 144 | 144 | 0.769 |
| 145 | 145 | 0.899 |
| 146 | 146 | 0.0945 |
| 147 | 147 | 0.437 |
| 148 | 148 | 0.43 |
| 149 | 149 | 0.00471 |
| 15 | 15 | 0.963 |
| 150 | 150 | 0.15 |
| 151 | 151 | 0.596 |
| 152 | 152 | 0.128 |
| 153 | 153 | 0.651 |
| 154 | 154 | 0.0839 |
| 155 | 155 | 0.0183 |
| 156 | 156 | 0.806 |
| 157 | 157 | 0.533 |
| 158 | 158 | 7.41707e-4 |
| 159 | 159 | 0.296 |
| 16 | 16 | 0.175 |
| 160 | 160 | 0.0982 |
| 161 | 161 | 0.854 |
| 162 | 162 | 0.933 |
| 163 | 163 | 0.448 |
| 164 | 164 | 0.94 |
| 165 | 165 | 0.0523 |
| 166 | 166 | 0.116 |
| 167 | 167 | 0.092 |
| 168 | 168 | 0.461 |
| 169 | 169 | 0.148 |
| 17 | 17 | 0.932 |
| 18 | 18 | 0.24 |
| 19 | 19 | 0.0857 |
| 2 | 2 | 0.24 |
| 20 | 20 | 0.329 |
| 21 | 21 | 0.693 |
| 22 | 22 | 0.383 |
| 23 | 23 | 0.587 |
| 24 | 24 | 0.793 |
| 25 | 25 | 0.207 |
| 26 | 26 | 0.75 |
| 27 | 27 | 0.655 |
| 28 | 28 | 0.199 |
| 29 | 29 | 0.603 |
| 3 | 3 | 0.837 |
| 30 | 30 | 0.114 |
| 31 | 31 | 0.419 |
| 32 | 32 | 1.67756e-9 |
| 33 | 33 | 0.505 |
| 34 | 34 | 0.312 |
| 35 | 35 | 0.208 |
| 36 | 36 | 0.468 |
| 37 | 37 | 0.848 |
| 38 | 38 | 0.527 |
| 39 | 39 | 0.124 |
| 4 | 4 | 0.649 |
| 40 | 40 | 0.615 |
| 41 | 41 | 0.831 |
| 42 | 42 | 0.699 |
| 43 | 43 | 0.679 |
| 44 | 44 | 0.943 |
| 45 | 45 | 0.348 |
| 46 | 46 | 0.839 |
| 47 | 47 | 0.662 |
| 48 | 48 | 0.977 |
| 49 | 49 | 0.725 |
| 5 | 5 | 0.424 |
| 50 | 50 | 0.424 |
| 51 | 51 | 0.873 |
| 52 | 52 | 0.624 |
| 53 | 53 | 0.373 |
| 54 | 54 | 0.991 |
| 55 | 55 | 0.465 |
| 56 | 56 | 0.811 |
| 57 | 57 | 0.553 |
| 58 | 58 | 0.264 |
| 59 | 59 | 0.37 |
| 6 | 6 | 0.773 |
| 60 | 60 | 0.651 |
| 61 | 61 | 0.681 |
| 62 | 62 | 0.436 |
| 63 | 63 | 0.624 |
| 64 | 64 | 0.742 |
| 65 | 65 | 0.811 |
| 66 | 66 | 0.347 |
| 67 | 67 | 0.562 |
| 68 | 68 | 0.842 |
| 69 | 69 | 0.957 |
| 7 | 7 | 0.871 |
| 70 | 70 | 0.274 |
| 71 | 71 | 0.324 |
| 72 | 72 | 0.844 |
| 73 | 73 | 0.277 |
| 74 | 74 | 0.665 |
| 75 | 75 | 0.471 |
| 76 | 76 | 0.108 |
| 77 | 77 | 0.102 |
| 78 | 78 | 0.573 |
| 79 | 79 | 0.196 |
| 8 | 8 | 0.225 |
| 80 | 80 | 0.399 |
| 81 | 81 | 0.363 |
| 82 | 82 | 0.223 |
| 83 | 83 | 0.0685 |
| 84 | 84 | 0.293 |
| 85 | 85 | 0.182 |
| 86 | 86 | 0.27 |
| 87 | 87 | 0.0812 |
| 88 | 88 | 0.482 |
| 89 | 89 | 0.135 |
| 9 | 9 | 0.711 |
| 90 | 90 | 0.716 |
| 91 | 91 | 0.861 |
| 92 | 92 | 0.493 |
| 93 | 93 | 0.534 |
| 94 | 94 | 0.849 |
| 95 | 95 | 0.883 |
| 96 | 96 | 0.51 |
| 97 | 97 | 0.398 |
| 98 | 98 | 0.15 |
| 99 | 99 | 0.00419 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs12571
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0000118 human cardiac myocyte sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0002371 (somatic cell)
0000393 (electrically responsive cell)
0000183 (contractile cell)
0000187 (muscle cell)
0000211 (electrically active cell)
0000255 (eukaryotic cell)
0002494 (cardiocyte)
0000737 (striated muscle cell)
0000746 (cardiac muscle cell)
UBERON: Anatomy
0000468 (multi-cellular organism)
0007100 (primary circulatory organ)
0000948 (heart)
0010314 (structure with developmental contribution from neural crest)
0000062 (organ)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0003103 (compound organ)
0010317 (germ layer / neural crest derived structure)
0004535 (cardiovascular system)
0001009 (circulatory system)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000118 (human cardiac myocyte sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000355 (multi-potent skeletal muscle stem cell)
CL:0000222 (mesodermal cell)
CL:0000513 (cardiac muscle myoblast)
