FF:11753-123G7: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet= | |DRA_sample_Accession=CAGE@SAMD00005181 | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL: | |accession_numbers=CAGE;DRX008552;DRR009424;DRZ000849;DRZ002234;DRZ012199;DRZ013584 | ||
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0007100,UBERON:0000948,UBERON:0002384,UBERON:0000479,UBERON:0010314,UBERON:0000062,UBERON:0004120,UBERON:0000061,UBERON:0000465,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0003103,UBERON:0010317,UBERON:0004535,UBERON:0001009 | |||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000723,CL:0000048,CL:0000548,CL:0002320,CL:0002371,CL:0000219,CL:0000134,CL:0000255,CL:0002494,CL:0000034,CL:0000569 | |||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000271 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score= | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
| Line 35: | Line 42: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/mesenchymal%2520precursor%2520cell%2520-%2520cardiac%252c%2520donor2.CNhs12369.11753-123G7.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/mesenchymal%2520precursor%2520cell%2520-%2520cardiac%252c%2520donor2.CNhs12369.11753-123G7.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/mesenchymal%2520precursor%2520cell%2520-%2520cardiac%252c%2520donor2.CNhs12369.11753-123G7.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/mesenchymal%2520precursor%2520cell%2520-%2520cardiac%252c%2520donor2.CNhs12369.11753-123G7.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/mesenchymal%2520precursor%2520cell%2520-%2520cardiac%252c%2520donor2.CNhs12369.11753-123G7.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:11753-123G7 | |id=FF:11753-123G7 | ||
|is_a=EFO:0002091;;FF: | |is_a=EFO:0002091;;FF:0000271 | ||
|is_obsolete= | |||
|library_id=CNhs12369 | |||
|library_id_phase_based=2:CNhs12369 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11753 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11753 | |||
|name=mesenchymal precursor cell - cardiac, donor2 | |name=mesenchymal precursor cell - cardiac, donor2 | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
| Line 42: | Line 61: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs12369,LSID914,release011,COMPLETED | |profile_hcage=CNhs12369,LSID914,release011,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=,,, | |profile_srnaseq=,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
|repeat_enrich_byfamily=0,0,0.057382505275071,0,0.0305812234382831,0,0,0.0451363589254012,0,-0.216199685316948,0.183872541408106,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0521313786633596,0,0,0.0305812234382831,0,0,0.351485184803924,0,0,0.0295160410686988,0,0,0,0,0,0,0,0,0,0,0.162472630847561,0,-0.00568047372268965,0.162472630847561,0.0611624468765662,0,0.0611624468765662,0,0,0,0,0.00636620232544875,0,0,0,0,0,0,0,0.0177726493075369,0,0,-0.097343627213097,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0611624468765662,0,0,0,-0.0134131544156028,0,0,0,0,0,0,0.000352822441681888,0.102727194505894,0,0,-0.0792528993351374,0.249609858263764,0,0.162472630847561,0.057382505275071,0.0611624468765662,0.0167296593124356,0.155568275430087,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0389910886473899,0.0611624468765662,0,0,-0.0544285288907889,-0.226941207797068,0,0,0.0611624468765662,0,0,0 | |||
|repeat_enrich_byname=0,0,0,0,0.0167296593124356,0.0611624468765662,0.0611624468765662,0.0611624468765662,0,0,0.205454389011787,0,0,0.162472630847561,0,0,0.0663965669778016,0,-0.100975826456353,-0.0287501319733299,0.0305812234382831,0,0.0415139990816399,0,0,0,0,0.449443081071982,0,0.449443081071982,0.344362282769559,0,0.660179438236879,0,0.554312164930553,0,0,0,0,0.103777120009363,-0.190707220348265,0,0.0122971349983178,-0.007181814200802,0,0,0,0,0.563499585965382,0,-0.0597170369171744,-0.0827201683234173,-0.0591389572552457,0.137337257591309,0.0578759789042643,0,0,0,0.192991432658124,0.256822966804821,0,0,0.0953565678342366,0.0853173253012656,0,0.0611624468765662,2.01432192563524,0,0.407353602338141,0.132641211285421,0,0,0,0,0.0611624468765662,0,0,0,0,0,0,0,0,0.570976425456363,-0.0134131544156028,0,0,0,0,-0.0525344622527006,0,0.0807389805039901,0.445964477783458,-0.0250692262231457,0.00701235560919575,-0.218054997860149,0,0.211953959773522,0.0546554098942765,-0.557787538504414,-0.029931199704089,0.278057400178849,0.344005625925846,0,0.0320215533365369,0.0710880879591737,0.059777194114213,0.0218330395931348,-0.0409393636196064,0.613449370197851,0.0165843365022709,0.0611624468765662,0,0.0676655706885402,0.0123280199436249,0,-0.149434595397004,-0.0179432736294908,-0.0663555244062835,0.142886298372231,-0.136026931544995,0.0276959393209668,-0.0837700094071419,0.318834567097828,0.285832400740894,0.0130784710133577,0.310191909775952,0,0.0611624468765662,0,-0.00924060744051715,-0.0195446580079636,0.0049186543752735,0.000820393308172405,-0.139615179041421,0.0464207494727738,0.0305812234382831,0.0783096891548056,-0.0693681343461832,0,0,-0.298338744384765,0,0,0.0665122124856188,0,0,0.0641033787784593,-0.0673207021828836,-0.118090551005403,0,-0.0550513645540955,0,-0.140498359220904,0,-0.0556453682086823,-0.0312448869072522,-0.092619763349505,0.0180986251554929,0,-0.017688756635814,0.187235704011949,0.115841968568657,0.0497766354555453,-0.0584468268118252,-0.0115995617163835,-0.0153572300296198,-0.0792528993351374,-0.0339681648910323,-0.0165877036002541,0.284983559820367,0,0.000352822441681888,0,-0.036088797676198,0.134586626517717,0.162472630847561,-0.138297514149993,0,-0.10490001131345,0,-0.161093758607523,-0.0466644956833405,0.14880157788128,-0.0219172472552669,0,-0.15156625637135,1.03160573711701,0,0.00805411331466616,-0.0253838406959727,0,0.222743308961016,-0.0181978348910582,0.270242956063119,-0.0577531412554141,0,0.219586825867036,0,0.162472630847561,0.286540791267128,-0.0300216487526015,0,-0.116672250862075,-0.115433658423497,-0.110446785405395,-0.00120606288479203,0,0,-0.0749056937731384,0,0,0.0302668931836159,0.0620954532465581,-0.0670025095231521,-0.192163894610189,0.0480604313514897,0.219498133864474,0,0,0.102910720521471,0,0.103748367821352,0.0163017511123375,0,0.29293772243799,0.256482279305522,0,0.0305812234382831,0.70614018278665,0,0.0611624468765662,0,0,0,0,0,0,-0.346230730783212,0.159510356566987,0,0.00659274423901413,0,0,0,0.162472630847561,0,0,0,0.449443081071982,0.826261771903794,0.011094340043236,0.082436973335367,0,0,0,0,0.389001313966393,-0.0884715515445817,0.162472630847561,-0.0707002596210655,0.0611624468765662,0,0,0,0.0286240207609307,0,0,0,0,-0.057730457053664,-0.150866103457671,0,0,0,0.311136550860175,0,0,0,0,-0.0773790578399426,0,0,0.41466143388823,0,0.0559220153693079,0.198856606939805,0,0.0829295922238454,-0.227548340505777,-0.4257227676884,0,0,-0.200184684913321,0,0.197601748518394,0.167411212630767,-0.0520565411365451,0,-0.0167789489725171,0,0,0,0,0,0.114765010550142,-0.0995495018496136,0,0,0.00759929640156837,0,0,0,0,0,0,0,0.114765010550142,0.0705808181407832,0.188214429828136,0.162472630847561,0,0,0,0,0,0,0.456839576948741,-0.149202117916737,0,0,0,0,0,0,0,0,-0.226863189401527,0,0,0.0611624468765662,0,0,0.0177726493075369,0,0,0,0.114765010550142,0.367745082816212,0,0,-0.216199685316948,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0085540754853057,-0.336308163747078,0,0,0,0,0.0611624468765662,0,0,-0.160068287655948,0,0,0,0,0.000880636841164836,0,0,0,0.100658004222631,0,0.0451363589254012,0,0,0,0.057382505275071,0,0,0.0305812234382831,0,0,0,0,0,0,0,0,0,0,0.140219243243323,0,0,0,0.546194612996693,0.0841024163135658,0.0611624468765662,-0.0336230588375779,0,0,0.113883358227312,0,0,0,0,0,0,0.026042081246544,0,0,0,0,0,0,0,0.057382505275071,0,0,0,0,0,0,0,0,0,0,0.0611624468765662,0,0,0,0,0,0,-0.0656447478517201,0,0,0,0,0.373110392295655,0,0,0.351485184803924,0,0,-0.004069081087172,0,0,0,0,0,0,0.258481293543909,0.409861575566057,-0.0307376065820727,0,0,0,0.0268507429413255,0,0,0.0185510405181177,0,0.246798054844465,0,0,0,0,0,0,0,0,0.0611624468765662,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0521313786633596,0,0,0,0,0,0,0,0,0,0,0,0,0.0305812234382831,0,0,0,0,0,0,0,0,0,0,0,0,0.114765010550142,0,0.400073095228999,0,0,0,0,0,0,0,-0.00343013983713342,0.114765010550142,0,0,0,0,0,0,0,0,0,0,0,0.0305812234382831,0,0,0,0,0,0,0,0,0.162472630847561,0.200420018218008,0,0,0,0.0673522568296029,0,0,0,0,0,0,0.114765010550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| |||
|rna_box=123 | |rna_box=123 | ||
|rna_catalog_number= | |rna_catalog_number= | ||
| Line 57: | Line 79: | ||
|rna_weight_ug=41.62425 | |rna_weight_ug=41.62425 | ||
|sample_age= | |sample_age= | ||
|sample_category=primary cells | |||
|sample_cell_catalog= | |sample_cell_catalog= | ||
|sample_cell_line= | |sample_cell_line= | ||
| Line 69: | Line 92: | ||
|sample_ethnicity= | |sample_ethnicity= | ||
|sample_experimental_condition= | |sample_experimental_condition= | ||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;3.2747982029032e-210!GO:0005737;cytoplasm;2.94371211673375e-193!GO:0043226;organelle;1.79333682069663e-160!GO:0043229;intracellular organelle;5.02123329967362e-160!GO:0043231;intracellular membrane-bound organelle;7.28969524951563e-160!GO:0043227;membrane-bound organelle;1.31721496836009e-159!GO:0044444;cytoplasmic part;3.16401871846098e-144!GO:0044422;organelle part;3.83937591780451e-117!GO:0044446;intracellular organelle part;9.50883812078124e-116!GO:0032991;macromolecular complex;8.44766696240737e-79!GO:0005515;protein binding;1.53000804493647e-78!GO:0044238;primary metabolic process;1.12449633087245e-75!GO:0044237;cellular metabolic process;1.74506474471119e-75!GO:0030529;ribonucleoprotein complex;5.38189737440661e-75!GO:0043170;macromolecule metabolic process;7.14792374014925e-68!GO:0005739;mitochondrion;1.24098511860668e-61!GO:0043233;organelle lumen;2.4660150539616e-61!GO:0031974;membrane-enclosed lumen;2.4660150539616e-61!GO:0003723;RNA binding;5.70219401303251e-58!GO:0044428;nuclear part;4.93843875497862e-55!GO:0031090;organelle membrane;1.78458253243525e-53!GO:0005634;nucleus;1.61261909012866e-49!GO:0019538;protein metabolic process;1.80654826019698e-49!GO:0005840;ribosome;7.6387197705409e-47!GO:0015031;protein transport;1.25993309125826e-44!GO:0006412;translation;1.7880012334524e-44!GO:0044260;cellular macromolecule metabolic process;2.43628394460136e-44!GO:0044267;cellular protein metabolic process;2.04274124927785e-43!GO:0033036;macromolecule localization;3.03109881428232e-43!GO:0045184;establishment of protein localization;1.40980485339206e-41!GO:0016043;cellular component organization and biogenesis;1.50212503566808e-41!GO:0009058;biosynthetic process;4.77536065761329e-41!GO:0044429;mitochondrial part;4.77536065761329e-41!GO:0003735;structural constituent of ribosome;8.24618195166948e-41!GO:0005829;cytosol;1.0331677434861e-40!GO:0008104;protein localization;1.3630822899034e-40!GO:0006396;RNA processing;1.42836405940998e-38!GO:0043234;protein complex;6.21256945534733e-38!GO:0031967;organelle envelope;6.55737803529807e-37!GO:0031975;envelope;1.14278711278008e-36!GO:0033279;ribosomal subunit;1.88695146033511e-36!GO:0044249;cellular biosynthetic process;2.9405530542208e-36!GO:0009059;macromolecule biosynthetic process;2.9405530542208e-36!GO:0046907;intracellular transport;3.45745431969773e-35!GO:0031981;nuclear lumen;7.46464196155127e-34!GO:0043283;biopolymer metabolic process;1.1474969339767e-32!GO:0016071;mRNA metabolic process;9.27240410291505e-32!GO:0010467;gene expression;3.33939763098074e-31!GO:0006886;intracellular protein transport;1.01739392953717e-29!GO:0008380;RNA splicing;1.89730984875568e-29!GO:0005740;mitochondrial envelope;1.64570363877211e-27!GO:0005830;cytosolic ribosome (sensu Eukaryota);5.11256402230205e-27!GO:0006397;mRNA processing;6.1594526570823e-27!GO:0031966;mitochondrial membrane;6.53622084687563e-26!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.42077477496683e-25!GO:0022613;ribonucleoprotein complex biogenesis and assembly;9.86437892030819e-25!GO:0019866;organelle inner membrane;2.27688022322406e-24!GO:0005783;endoplasmic reticulum;4.45894815297116e-24!GO:0065003;macromolecular complex assembly;2.00515935773453e-23!GO:0012505;endomembrane system;4.56966359507741e-23!GO:0005743;mitochondrial inner membrane;5.81045815561408e-23!GO:0006996;organelle organization and biogenesis;1.10409590701911e-22!GO:0006119;oxidative phosphorylation;8.16218478453062e-22!GO:0044445;cytosolic part;1.29384527223654e-21!GO:0051641;cellular localization;1.58343220938311e-21!GO:0051649;establishment of cellular localization;1.76108551231e-21!GO:0022607;cellular component assembly;4.12857484311871e-21!GO:0005654;nucleoplasm;1.44053629844394e-20!GO:0043228;non-membrane-bound organelle;2.10967392388492e-20!GO:0043232;intracellular non-membrane-bound organelle;2.10967392388492e-20!GO:0006457;protein folding;3.60326309095393e-20!GO:0005681;spliceosome;4.07229970806814e-20!GO:0044432;endoplasmic reticulum part;9.58308931834234e-20!GO:0015934;large ribosomal subunit;2.30147896316883e-19!GO:0048770;pigment granule;4.95315539295811e-19!GO:0042470;melanosome;4.95315539295811e-19!GO:0000166;nucleotide binding;5.39376851668449e-19!GO:0044455;mitochondrial membrane part;1.62145745935909e-18!GO:0016462;pyrophosphatase activity;2.55021688081078e-18!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;2.87269339692688e-18!GO:0005794;Golgi apparatus;3.09393291540556e-18!GO:0016817;hydrolase activity, acting on acid anhydrides;4.28562450288938e-18!GO:0015935;small ribosomal subunit;4.68327563698367e-18!GO:0008134;transcription factor binding;6.60761162817481e-18!GO:0017111;nucleoside-triphosphatase activity;1.35786262736073e-17!GO:0044451;nucleoplasm part;6.45713482253604e-17!GO:0031980;mitochondrial lumen;2.08901660778693e-16!GO:0005759;mitochondrial matrix;2.08901660778693e-16!GO:0051186;cofactor metabolic process;4.61545291241833e-16!GO:0005746;mitochondrial respiratory chain;5.48990312733402e-16!GO:0022618;protein-RNA complex assembly;9.55465782746137e-16!GO:0000502;proteasome complex (sensu Eukaryota);1.17838669631912e-15!GO:0044265;cellular macromolecule catabolic process;2.05912844411129e-15!GO:0006605;protein targeting;3.43852757284909e-15!GO:0006259;DNA metabolic process;4.65901395771577e-15!GO:0048193;Golgi vesicle transport;5.85239807921449e-15!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;6.60279619987025e-15!GO:0005730;nucleolus;8.63974724782507e-15!GO:0016874;ligase activity;1.11043424082126e-14!GO:0051603;proteolysis involved in cellular protein catabolic process;1.2648401597564e-14!GO:0043285;biopolymer catabolic process;1.69674749009527e-14!GO:0019941;modification-dependent protein catabolic process;2.55472098434068e-14!GO:0043632;modification-dependent macromolecule catabolic process;2.55472098434068e-14!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);2.93146932970475e-14!GO:0044257;cellular protein catabolic process;3.09878555390121e-14!GO:0006511;ubiquitin-dependent protein catabolic process;3.40374911023822e-14!GO:0006512;ubiquitin cycle;3.79560035029738e-14!GO:0016192;vesicle-mediated transport;3.83432415146597e-14!GO:0042175;nuclear envelope-endoplasmic reticulum network;4.47873352354394e-14!GO:0050136;NADH dehydrogenase (quinone) activity;4.51514932148666e-14!GO:0003954;NADH dehydrogenase activity;4.51514932148666e-14!GO:0008137;NADH dehydrogenase (ubiquinone) activity;4.51514932148666e-14!GO:0044248;cellular catabolic process;6.3521678342417e-14!GO:0051082;unfolded protein binding;7.079468447503e-14!GO:0008135;translation factor activity, nucleic acid binding;7.48160932154494e-14!GO:0009057;macromolecule catabolic process;8.90532089771501e-14!GO:0017076;purine nucleotide binding;1.21306995641191e-13!GO:0032553;ribonucleotide binding;1.35409179748481e-13!GO:0032555;purine ribonucleotide binding;1.35409179748481e-13!GO:0005789;endoplasmic reticulum membrane;1.63506014760481e-13!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);2.09087792892751e-13!GO:0005793;ER-Golgi intermediate compartment;2.38443125837334e-13!GO:0003676;nucleic acid binding;7.87221475402463e-13!GO:0030163;protein catabolic process;8.70728318633282e-13!GO:0005761;mitochondrial ribosome;1.25619691679897e-12!GO:0000313;organellar ribosome;1.25619691679897e-12!GO:0007049;cell cycle;1.60907149277561e-12!GO:0042775;organelle ATP synthesis coupled electron transport;2.09592236899489e-12!GO:0042773;ATP synthesis coupled electron transport;2.09592236899489e-12!GO:0030964;NADH dehydrogenase complex (quinone);2.4161874976705e-12!GO:0045271;respiratory chain complex I;2.4161874976705e-12!GO:0005747;mitochondrial respiratory chain complex I;2.4161874976705e-12!GO:0043412;biopolymer modification;2.48509382608324e-12!GO:0006732;coenzyme metabolic process;2.60443934315002e-12!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;4.33573622138894e-12!GO:0048523;negative regulation of cellular process;4.33573622138894e-12!GO:0016070;RNA metabolic process;5.73018330557107e-12!GO:0012501;programmed cell death;6.64683961969125e-12!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;7.30889947269781e-12!GO:0006915;apoptosis;1.4903459444479e-11!GO:0003712;transcription cofactor activity;4.38878548722421e-11!GO:0000398;nuclear mRNA splicing, via spliceosome;4.46925649238016e-11!GO:0000375;RNA splicing, via transesterification reactions;4.46925649238016e-11!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;4.46925649238016e-11!GO:0009055;electron carrier activity;5.48010503512544e-11!GO:0006464;protein modification process;5.69300190708753e-11!GO:0008219;cell death;7.16311238731936e-11!GO:0016265;death;7.16311238731936e-11!GO:0009259;ribonucleotide metabolic process;1.11358852681611e-10!GO:0006163;purine nucleotide metabolic process;1.36310612772958e-10!GO:0003743;translation initiation factor activity;1.55955266642124e-10!GO:0005635;nuclear envelope;1.79031509365259e-10!GO:0009150;purine ribonucleotide metabolic process;1.87435234398894e-10!GO:0005524;ATP binding;4.38928882460686e-10!GO:0006413;translational initiation;4.90440497387974e-10!GO:0048519;negative regulation of biological process;5.66626189550658e-10!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;5.82718908678599e-10!GO:0042254;ribosome biogenesis and assembly;5.82718908678599e-10!GO:0032559;adenyl ribonucleotide binding;5.82718908678599e-10!GO:0030554;adenyl nucleotide binding;6.48701240616013e-10!GO:0005768;endosome;9.32105002126709e-10!GO:0006164;purine nucleotide biosynthetic process;1.22998167816381e-09!GO:0031965;nuclear membrane;1.45133692209166e-09!GO:0009199;ribonucleoside triphosphate metabolic process;1.52532438596716e-09!GO:0009152;purine ribonucleotide biosynthetic process;1.67321088712275e-09!GO:0006913;nucleocytoplasmic transport;1.71309366776709e-09!GO:0016604;nuclear body;1.71309366776709e-09!GO:0009205;purine ribonucleoside triphosphate metabolic process;1.88423437977769e-09!GO:0009144;purine nucleoside triphosphate metabolic process;1.88423437977769e-09!GO:0008565;protein transporter activity;2.06113190255228e-09!GO:0016491;oxidoreductase activity;2.36235299793182e-09!GO:0009260;ribonucleotide biosynthetic process;3.05408587363595e-09!GO:0009141;nucleoside triphosphate metabolic process;3.1668199881798e-09!GO:0006446;regulation of translational initiation;3.36126781173511e-09!GO:0051169;nuclear transport;3.53370613385721e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;4.0477299912517e-09!GO:0043687;post-translational protein modification;4.06104600213677e-09!GO:0006974;response to DNA damage stimulus;5.29860396174519e-09!GO:0022402;cell cycle process;5.43022579493533e-09!GO:0005788;endoplasmic reticulum lumen;8.03208954563955e-09!GO:0030120;vesicle coat;8.54757770041183e-09!GO:0030662;coated vesicle membrane;8.54757770041183e-09!GO:0015986;ATP synthesis coupled proton transport;9.5348690023748e-09!GO:0015985;energy coupled proton transport, down electrochemical gradient;9.5348690023748e-09!GO:0009056;catabolic process;1.2230991152608e-08!GO:0006366;transcription from RNA polymerase II promoter;1.23867539389913e-08!GO:0046034;ATP metabolic process;1.44791673087891e-08!GO:0044431;Golgi apparatus part;1.64323383669532e-08!GO:0003924;GTPase activity;1.8448446078945e-08!GO:0009142;nucleoside triphosphate biosynthetic process;1.87095399582275e-08!GO:0009201;ribonucleoside triphosphate biosynthetic process;1.87095399582275e-08!GO:0044453;nuclear membrane part;1.87969539287845e-08!GO:0000074;regulation of progression through cell cycle;1.98453101049545e-08!GO:0051726;regulation of cell cycle;1.98459168445889e-08!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;2.31688716525968e-08!GO:0009145;purine nucleoside triphosphate biosynthetic process;2.31688716525968e-08!GO:0009060;aerobic respiration;2.51819050774201e-08!GO:0016887;ATPase activity;2.62573886897047e-08!GO:0019829;cation-transporting ATPase activity;3.60271846783674e-08!GO:0006399;tRNA metabolic process;3.60271846783674e-08!GO:0017038;protein import;3.80021985787771e-08!GO:0045333;cellular respiration;3.96014588965872e-08!GO:0042623;ATPase activity, coupled;5.39976672232189e-08!GO:0006888;ER to Golgi vesicle-mediated transport;5.83338340060717e-08!GO:0005773;vacuole;6.41729644469416e-08!GO:0048475;coated membrane;8.55256528794684e-08!GO:0030117;membrane coat;8.55256528794684e-08!GO:0016607;nuclear speck;9.1007943361006e-08!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;9.92806834152459e-08!GO:0006461;protein complex assembly;1.20325903858215e-07!GO:0045786;negative regulation of progression through cell cycle;1.45540741992131e-07!GO:0051188;cofactor biosynthetic process;1.60745435494918e-07!GO:0006754;ATP biosynthetic process;1.62602122443436e-07!GO:0006753;nucleoside phosphate metabolic process;1.62602122443436e-07!GO:0008639;small protein conjugating enzyme activity;1.6969803175346e-07!GO:0044440;endosomal part;1.79952632344839e-07!GO:0010008;endosome membrane;1.79952632344839e-07!GO:0016023;cytoplasmic membrane-bound vesicle;1.89305787604598e-07!GO:0042981;regulation of apoptosis;1.96010983271768e-07!GO:0031988;membrane-bound vesicle;1.96010983271768e-07!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;2.20412189850256e-07!GO:0004812;aminoacyl-tRNA ligase activity;2.20412189850256e-07!GO:0016875;ligase activity, forming carbon-oxygen bonds;2.20412189850256e-07!GO:0043067;regulation of programmed cell death;2.2486145796489e-07!GO:0051246;regulation of protein metabolic process;2.44277509675243e-07!GO:0050794;regulation of cellular process;2.62307396445656e-07!GO:0019787;small conjugating protein ligase activity;2.87344048803255e-07!GO:0004842;ubiquitin-protein ligase activity;2.89382073112332e-07!GO:0016879;ligase activity, forming carbon-nitrogen bonds;3.09559241385372e-07!GO:0043038;amino acid activation;3.09559241385372e-07!GO:0006418;tRNA aminoacylation for protein translation;3.09559241385372e-07!GO:0043039;tRNA aminoacylation;3.09559241385372e-07!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;3.38398895198837e-07!GO:0003714;transcription corepressor activity;5.30680925970454e-07!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;5.49825858205917e-07!GO:0015078;hydrogen ion transmembrane transporter activity;5.65333949709416e-07!GO:0051187;cofactor catabolic process;6.05025928258492e-07!GO:0031982;vesicle;6.31117118902673e-07!GO:0009719;response to endogenous stimulus;6.75091895742845e-07!GO:0005839;proteasome core complex (sensu Eukaryota);7.66601921547457e-07!GO:0030532;small nuclear ribonucleoprotein complex;8.11013201934006e-07!GO:0016787;hydrolase activity;8.11013201934006e-07!GO:0006099;tricarboxylic acid cycle;8.12930558034686e-07!GO:0046356;acetyl-CoA catabolic process;8.12930558034686e-07!GO:0006281;DNA repair;8.21225850908138e-07!GO:0031410;cytoplasmic vesicle;8.95554490082148e-07!GO:0043069;negative regulation of programmed cell death;9.24815544727914e-07!GO:0000323;lytic vacuole;9.53589849632166e-07!GO:0005764;lysosome;9.53589849632166e-07!GO:0005770;late endosome;9.8716374777467e-07!GO:0004386;helicase activity;1.12334554235819e-06!GO:0016469;proton-transporting two-sector ATPase complex;1.1437285116248e-06!GO:0000139;Golgi membrane;1.17226048821956e-06!GO:0008361;regulation of cell size;1.18044806440673e-06!GO:0043066;negative regulation of apoptosis;1.18044806440673e-06!GO:0016881;acid-amino acid ligase activity;1.62561239267213e-06!GO:0065002;intracellular protein transport across a membrane;1.67881151593067e-06!GO:0016049;cell growth;1.69156419515384e-06!GO:0031252;leading edge;1.71418876299878e-06!GO:0007005;mitochondrion organization and biogenesis;1.8173160217539e-06!GO:0009117;nucleotide metabolic process;1.92329639064897e-06!GO:0016564;transcription repressor activity;1.92574798587497e-06!GO:0009109;coenzyme catabolic process;2.07277602283463e-06!GO:0006084;acetyl-CoA metabolic process;2.09483742471061e-06!GO:0006325;establishment and/or maintenance of chromatin architecture;2.24890997218423e-06!GO:0006364;rRNA processing;2.55075279081503e-06!GO:0001558;regulation of cell growth;2.86939954578579e-06!GO:0006091;generation of precursor metabolites and energy;2.91119124705531e-06!GO:0005643;nuclear pore;2.9632067322146e-06!GO:0007249;I-kappaB kinase/NF-kappaB cascade;3.10134834591686e-06!GO:0000278;mitotic cell cycle;3.14966300392837e-06!GO:0005798;Golgi-associated vesicle;3.35406744749874e-06!GO:0008026;ATP-dependent helicase activity;3.4693099982448e-06!GO:0031324;negative regulation of cellular metabolic process;3.52240429915627e-06!GO:0005525;GTP binding;3.56193076220112e-06!GO:0008654;phospholipid biosynthetic process;3.81529135858981e-06!GO:0006752;group transfer coenzyme metabolic process;4.25300968870376e-06!GO:0045259;proton-transporting ATP synthase complex;4.63367084376342e-06!GO:0016072;rRNA metabolic process;4.70006073289434e-06!GO:0004298;threonine endopeptidase activity;5.07786016118272e-06!GO:0009108;coenzyme biosynthetic process;5.46021676797342e-06!GO:0006323;DNA packaging;5.6601157719777e-06!GO:0051170;nuclear import;5.83238299105763e-06!GO:0006793;phosphorus metabolic process;5.98782182224455e-06!GO:0006796;phosphate metabolic process;5.98782182224455e-06!GO:0006916;anti-apoptosis;6.95393646830537e-06!GO:0016853;isomerase activity;7.03268086331029e-06!GO:0043566;structure-specific DNA binding;8.25348460139436e-06!GO:0006606;protein import into nucleus;1.0203802438433e-05!GO:0046930;pore complex;1.11627631338077e-05!GO:0000245;spliceosome assembly;1.16802349914105e-05!GO:0016310;phosphorylation;1.2955620412903e-05!GO:0003697;single-stranded DNA binding;1.30158406946293e-05!GO:0045454;cell redox homeostasis;1.44772115608655e-05!GO:0006613;cotranslational protein targeting to membrane;1.57297313580117e-05!GO:0051789;response to protein stimulus;1.6023721398885e-05!GO:0006986;response to unfolded protein;1.6023721398885e-05!GO:0031968;organelle outer membrane;1.76871887146028e-05!GO:0005769;early endosome;1.8190259370541e-05!GO:0051276;chromosome organization and biogenesis;1.93025964129793e-05!GO:0009892;negative regulation of metabolic process;1.93025964129793e-05!GO:0032561;guanyl ribonucleotide binding;2.07016675238862e-05!GO:0019001;guanyl nucleotide binding;2.07016675238862e-05!GO:0016740;transferase activity;2.07823075788463e-05!GO:0019867;outer membrane;2.3712077658252e-05!GO:0030036;actin cytoskeleton organization and biogenesis;2.83014556622298e-05!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;3.4758893826165e-05!GO:0016568;chromatin modification;3.68871231926729e-05!GO:0032446;protein modification by small protein conjugation;3.74705887707189e-05!GO:0006403;RNA localization;4.00722960803886e-05!GO:0005667;transcription factor complex;4.13688790287524e-05!GO:0050789;regulation of biological process;4.13973665111829e-05!GO:0030133;transport vesicle;4.56860905597044e-05!GO:0005905;coated pit;4.78461833465932e-05!GO:0016567;protein ubiquitination;5.06766619812884e-05!GO:0005762;mitochondrial large ribosomal subunit;5.10791907715745e-05!GO:0000315;organellar large ribosomal subunit;5.10791907715745e-05!GO:0050657;nucleic acid transport;5.24974487706433e-05!GO:0051236;establishment of RNA localization;5.24974487706433e-05!GO:0050658;RNA transport;5.24974487706433e-05!GO:0015077;monovalent inorganic cation transmembrane transporter activity;5.51068067890798e-05!GO:0015980;energy derivation by oxidation of organic compounds;6.15504172204814e-05!GO:0000151;ubiquitin ligase complex;6.33047712268612e-05!GO:0003713;transcription coactivator activity;7.5350545562201e-05!GO:0031202;RNA splicing factor activity, transesterification mechanism;7.66377927914361e-05!GO:0033116;ER-Golgi intermediate compartment membrane;8.63294986431608e-05!GO:0030867;rough endoplasmic reticulum membrane;9.71978670779565e-05!GO:0016563;transcription activator activity;9.76826307624045e-05!GO:0005791;rough endoplasmic reticulum;0.000100231043536704!GO:0005741;mitochondrial outer membrane;0.00010625635200929!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.000110376719502213!GO:0016126;sterol biosynthetic process;0.000119413945666923!GO:0048522;positive regulation of cellular process;0.00012195776723666!GO:0006260;DNA replication;0.000141533664798957!GO:0016859;cis-trans isomerase activity;0.000145812986414628!GO:0030029;actin filament-based process;0.000149898769205271!GO:0005048;signal sequence binding;0.00016400380764857!GO:0007243;protein kinase cascade;0.000167112910840654!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.000202210008777146!GO:0051427;hormone receptor binding;0.000226434088281842!GO:0003724;RNA helicase activity;0.000228665051590294!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.000245143783346438!GO:0008610;lipid biosynthetic process;0.00025972423590981!GO:0006612;protein targeting to membrane;0.000285088738049568!GO:0019899;enzyme binding;0.000285088738049568!GO:0016779;nucleotidyltransferase activity;0.000298965339231267!GO:0015630;microtubule cytoskeleton;0.000336822768248325!GO:0005813;centrosome;0.000337084808845548!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000340747879864165!GO:0040008;regulation of growth;0.000366431167268452!GO:0043021;ribonucleoprotein binding;0.0003700267372012!GO:0004576;oligosaccharyl transferase activity;0.000382514512564117!GO:0016481;negative regulation of transcription;0.000383905309201703!GO:0044262;cellular carbohydrate metabolic process;0.000386997596672948!GO:0065004;protein-DNA complex assembly;0.000386999347823861!GO:0008250;oligosaccharyl transferase complex;0.000392537902958531!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.000395200530707953!GO:0046474;glycerophospholipid biosynthetic process;0.0004144110949421!GO:0005885;Arp2/3 protein complex;0.000430352081771862!GO:0035257;nuclear hormone receptor binding;0.000442270226861811!GO:0030663;COPI coated vesicle membrane;0.000474994515253007!GO:0030126;COPI vesicle coat;0.000474994515253007!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000491705752440363!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.000491705752440363!GO:0007050;cell cycle arrest;0.000516951113527175!GO:0016044;membrane organization and biogenesis;0.000546956240037656!GO:0000314;organellar small ribosomal subunit;0.000550934761934161!GO:0005763;mitochondrial small ribosomal subunit;0.000550934761934161!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;0.000582140827140274!GO:0006979;response to oxidative stress;0.000597046713980994!GO:0005694;chromosome;0.000614903439738531!GO:0051252;regulation of RNA metabolic process;0.000628009082332081!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.000726546786485044!GO:0015399;primary active transmembrane transporter activity;0.000726546786485044!GO:0005815;microtubule organizing center;0.000754378015315714!GO:0018196;peptidyl-asparagine modification;0.000776307484696524!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.000776307484696524!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000779443194468734!GO:0043623;cellular protein complex assembly;0.000779939175252569!GO:0006695;cholesterol biosynthetic process;0.000785815649719652!GO:0051028;mRNA transport;0.000818777741662196!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000850927553064057!GO:0006333;chromatin assembly or disassembly;0.000891953798021411!GO:0051920;peroxiredoxin activity;0.000965396156961553!GO:0030658;transport vesicle membrane;0.00103119208852896!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00105632400109437!GO:0007264;small GTPase mediated signal transduction;0.0010607212488067!GO:0016197;endosome transport;0.0010607212488067!GO:0007010;cytoskeleton organization and biogenesis;0.0010607212488067!GO:0019843;rRNA binding;0.00108910969955742!GO:0048471;perinuclear region of cytoplasm;0.0010911924871443!GO:0019752;carboxylic acid metabolic process;0.00111498009859815!GO:0006082;organic acid metabolic process;0.00115677302451255!GO:0009165;nucleotide biosynthetic process;0.00119072623232811!GO:0046467;membrane lipid biosynthetic process;0.00121870973341821!GO:0006626;protein targeting to mitochondrion;0.00122391007140134!GO:0030137;COPI-coated vesicle;0.00127820670771214!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.00131380353121658!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00133963926602438!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00141793492014694!GO:0043681;protein import into mitochondrion;0.00146421310464357!GO:0006891;intra-Golgi vesicle-mediated transport;0.0014805224619089!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00169299517645681!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.0017389704867187!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.0017389704867187!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.0017389704867187!GO:0051045;negative regulation of membrane protein ectodomain proteolysis;0.0018890792995072!GO:0051043;regulation of membrane protein ectodomain proteolysis;0.0018890792995072!GO:0046489;phosphoinositide biosynthetic process;0.0018890792995072!GO:0003899;DNA-directed RNA polymerase activity;0.00190993556554406!GO:0065009;regulation of a molecular function;0.00209711907860447!GO:0000087;M phase of mitotic cell cycle;0.00218162078694223!GO:0043488;regulation of mRNA stability;0.0021871504681752!GO:0043487;regulation of RNA stability;0.0021871504681752!GO:0030132;clathrin coat of coated pit;0.00221199871480646!GO:0006414;translational elongation;0.00222168831379413!GO:0003729;mRNA binding;0.00226162015963486!GO:0007067;mitosis;0.00253952437436411!GO:0006650;glycerophospholipid metabolic process;0.00255693414546882!GO:0044427;chromosomal part;0.00259943669521851!GO:0030118;clathrin coat;0.00275983845512249!GO:0033673;negative regulation of kinase activity;0.0028764583688477!GO:0006469;negative regulation of protein kinase activity;0.0028764583688477!GO:0030027;lamellipodium;0.00292730368169068!GO:0000785;chromatin;0.00295014494534225!GO:0048500;signal recognition particle;0.00296060652974708!GO:0004177;aminopeptidase activity;0.00297298762350787!GO:0001726;ruffle;0.00298586406255089!GO:0006950;response to stress;0.00304489458476153!GO:0048518;positive regulation of biological process;0.00304800553338828!GO:0031072;heat shock protein binding;0.0030882568375739!GO:0008186;RNA-dependent ATPase activity;0.00311479424787367!GO:0005774;vacuolar membrane;0.00311692383465536!GO:0030660;Golgi-associated vesicle membrane;0.00332959266317521!GO:0030659;cytoplasmic vesicle membrane;0.00333684751067373!GO:0022403;cell cycle phase;0.00339771141536174!GO:0043284;biopolymer biosynthetic process;0.00341421881330093!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.00347199634142253!GO:0007006;mitochondrial membrane organization and biogenesis;0.00351278729977215!GO:0003690;double-stranded DNA binding;0.0035190826576149!GO:0065007;biological regulation;0.00358681251151804!GO:0031902;late endosome membrane;0.00358681251151804!GO:0006839;mitochondrial transport;0.00364796403063081!GO:0030176;integral to endoplasmic reticulum membrane;0.00369741011151389!GO:0031901;early endosome membrane;0.0037978762015361!GO:0006509;membrane protein ectodomain proteolysis;0.00381740003423216!GO:0033619;membrane protein proteolysis;0.00381740003423216!GO:0051348;negative regulation of transferase activity;0.00383705400844796!GO:0051329;interphase of mitotic cell cycle;0.00392947919031285!GO:0008632;apoptotic program;0.00395950515095327!GO:0016628;oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor;0.00402273879282101!GO:0022890;inorganic cation transmembrane transporter activity;0.00404259630035373!GO:0051287;NAD binding;0.00410774788036075!GO:0006818;hydrogen transport;0.00446625398159084!GO:0015992;proton transport;0.00454876382457514!GO:0051301;cell division;0.00462777909753524!GO:0016860;intramolecular oxidoreductase activity;0.00469596446432899!GO:0035258;steroid hormone receptor binding;0.00483976125004554!GO:0030125;clathrin vesicle coat;0.00499647909007134!GO:0030665;clathrin coated vesicle membrane;0.00499647909007134!GO:0030134;ER to Golgi transport vesicle;0.00504995070393366!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00533326207215718!GO:0045792;negative regulation of cell size;0.00561492644460248!GO:0007034;vacuolar transport;0.0056445645716317!GO:0008092;cytoskeletal protein binding;0.00567522617699099!GO:0006740;NADPH regeneration;0.00571938265552282!GO:0006098;pentose-phosphate shunt;0.00571938265552282!GO:0006892;post-Golgi vesicle-mediated transport;0.00571938265552282!GO:0045941;positive regulation of transcription;0.00581007874145338!GO:0030880;RNA polymerase complex;0.00583945869905772!GO:0016363;nuclear matrix;0.00588072197204502!GO:0051168;nuclear export;0.00596649956456927!GO:0043492;ATPase activity, coupled to movement of substances;0.00597660985023125!GO:0005869;dynactin complex;0.00598476113323505!GO:0006402;mRNA catabolic process;0.006056484572948!GO:0046519;sphingoid metabolic process;0.00613706604021477!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00614871743827603!GO:0045047;protein targeting to ER;0.00614871743827603!GO:0017166;vinculin binding;0.00614871743827603!GO:0008047;enzyme activator activity;0.00620516295959762!GO:0008180;signalosome;0.00631050404481176!GO:0003746;translation elongation factor activity;0.0063290959417575!GO:0007179;transforming growth factor beta receptor signaling pathway;0.00653904651828231!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00654055940471887!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00654055940471887!GO:0030127;COPII vesicle coat;0.0066640406870509!GO:0012507;ER to Golgi transport vesicle membrane;0.0066640406870509!GO:0006383;transcription from RNA polymerase III promoter;0.00671896080711013!GO:0030308;negative regulation of cell growth;0.00675885125414104!GO:0045893;positive regulation of transcription, DNA-dependent;0.00680866901757082!GO:0008154;actin polymerization and/or depolymerization;0.0071417963877079!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00725537269795594!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.00725537269795594!GO:0006790;sulfur metabolic process;0.00737962982256534!GO:0004004;ATP-dependent RNA helicase activity;0.00743774672640363!GO:0019222;regulation of metabolic process;0.00746909898238476!GO:0008312;7S RNA binding;0.00749423151229811!GO:0000059;protein import into nucleus, docking;0.00757832398380961!GO:0007040;lysosome organization and biogenesis;0.00757832398380961!GO:0009967;positive regulation of signal transduction;0.00766578180489424!GO:0000096;sulfur amino acid metabolic process;0.00775530589066853!GO:0051087;chaperone binding;0.00776178085604104!GO:0008139;nuclear localization sequence binding;0.00797802660105286!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00811846036425834!GO:0044437;vacuolar part;0.00817918349511356!GO:0050662;coenzyme binding;0.00817918349511356!GO:0006693;prostaglandin metabolic process;0.00817918349511356!GO:0006692;prostanoid metabolic process;0.00817918349511356!GO:0017015;regulation of transforming growth factor beta receptor signaling pathway;0.00822779833890786!GO:0044433;cytoplasmic vesicle part;0.008649715221606!GO:0051128;regulation of cellular component organization and biogenesis;0.00876153834974055!GO:0000049;tRNA binding;0.00891093737338534!GO:0001872;zymosan binding;0.00894103419452695!GO:0001878;response to yeast;0.00894103419452695!GO:0048468;cell development;0.00921366335250071!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.00969752926415996!GO:0005684;U2-dependent spliceosome;0.00971372897729453!GO:0005765;lysosomal membrane;0.010391493865831!GO:0030384;phosphoinositide metabolic process;0.0104087591849491!GO:0048487;beta-tubulin binding;0.0104291028654144!GO:0051270;regulation of cell motility;0.010483910062053!GO:0003711;transcription elongation regulator activity;0.0106793164172895!GO:0045892;negative regulation of transcription, DNA-dependent;0.010773860926616!GO:0016408;C-acyltransferase activity;0.0108505594627518!GO:0006118;electron transport;0.0110615963003675!GO:0051325;interphase;0.0110743662116463!GO:0051059;NF-kappaB binding;0.0111973131640632!GO:0030119;AP-type membrane coat adaptor complex;0.0116512682078684!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.0116512682078684!GO:0000428;DNA-directed RNA polymerase complex;0.0116512682078684!GO:0003756;protein disulfide isomerase activity;0.0121948170731591!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0121948170731591!GO:0043433;negative regulation of transcription factor activity;0.0122432438466115!GO:0046483;heterocycle metabolic process;0.0122998598909485!GO:0045045;secretory pathway;0.0123018758507977!GO:0030521;androgen receptor signaling pathway;0.012429511429662!GO:0006672;ceramide metabolic process;0.0125519759143529!GO:0030041;actin filament polymerization;0.0129620277078802!GO:0043022;ribosome binding;0.0131717600403026!GO:0008033;tRNA processing;0.0131979437344017!GO:0000339;RNA cap binding;0.0134594900787964!GO:0051540;metal cluster binding;0.0137159889476379!GO:0051536;iron-sulfur cluster binding;0.0137159889476379!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.0137760257120798!GO:0006595;polyamine metabolic process;0.0137838952759137!GO:0006354;RNA elongation;0.0137908755956432!GO:0006289;nucleotide-excision repair;0.013886345098779!GO:0005586;collagen type III;0.0139037648654959!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.0139489270014891!GO:0015002;heme-copper terminal oxidase activity;0.0139489270014891!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.0139489270014891!GO:0004129;cytochrome-c oxidase activity;0.0139489270014891!GO:0015631;tubulin binding;0.0139751069685443!GO:0031529;ruffle organization and biogenesis;0.0139968045333265!GO:0007041;lysosomal transport;0.0140401035205041!GO:0006778;porphyrin metabolic process;0.0140401035205041!GO:0033013;tetrapyrrole metabolic process;0.0140401035205041!GO:0042802;identical protein binding;0.0143965948580695!GO:0044452;nucleolar part;0.0145818284378147!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.0146141484160293!GO:0007033;vacuole organization and biogenesis;0.0147005815406724!GO:0006643;membrane lipid metabolic process;0.0147499824879267!GO:0012506;vesicle membrane;0.0154786132588803!GO:0030145;manganese ion binding;0.0158682854972205!GO:0005581;collagen;0.0161753548937437!GO:0035035;histone acetyltransferase binding;0.0162541470994156!GO:0001527;microfibril;0.0163725607008962!GO:0006007;glucose catabolic process;0.0164266180696881!GO:0006334;nucleosome assembly;0.0166978494374473!GO:0006520;amino acid metabolic process;0.016736188911283!GO:0042158;lipoprotein biosynthetic process;0.0171745731332864!GO:0030032;lamellipodium biogenesis;0.0171745731332864!GO:0030518;steroid hormone receptor signaling pathway;0.0172207974766212!GO:0030865;cortical cytoskeleton organization and biogenesis;0.0173696202575037!GO:0050681;androgen receptor binding;0.0180467497404342!GO:0031497;chromatin assembly;0.0180719242349913!GO:0005832;chaperonin-containing T-complex;0.0188641897759319!GO:0005096;GTPase activator activity;0.0188734394928658!GO:0031625;ubiquitin protein ligase binding;0.0193535014320061!GO:0016272;prefoldin complex;0.019641255748189!GO:0043407;negative regulation of MAP kinase activity;0.0196809290195079!GO:0005862;muscle thin filament tropomyosin;0.0202952775033519!GO:0006749;glutathione metabolic process;0.0204953461681254!GO:0030131;clathrin adaptor complex;0.020505167780687!GO:0006497;protein amino acid lipidation;0.0215203522531047!GO:0006897;endocytosis;0.0223215795005085!GO:0010324;membrane invagination;0.0223215795005085!GO:0016706;oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;0.0226574955834273!GO:0031124;mRNA 3'-end processing;0.0229307826928685!GO:0016616;oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor;0.0229359940872003!GO:0005606;laminin-1 complex;0.0231713043999921!GO:0006739;NADP metabolic process;0.0232681632493672!GO:0006401;RNA catabolic process;0.0233070521028339!GO:0004674;protein serine/threonine kinase activity;0.0237288586872925!GO:0016125;sterol metabolic process;0.0237791766531144!GO:0043086;negative regulation of catalytic activity;0.0240034946992936!GO:0033559;unsaturated fatty acid metabolic process;0.0240482756270053!GO:0006636;unsaturated fatty acid biosynthetic process;0.0240482756270053!GO:0006506;GPI anchor biosynthetic process;0.0241567466870127!GO:0015036;disulfide oxidoreductase activity;0.0246287332780396!GO:0007021;tubulin folding;0.025731843966748!GO:0043065;positive regulation of apoptosis;0.0258456256400487!GO:0006607;NLS-bearing substrate import into nucleus;0.0258456256400487!GO:0051539;4 iron, 4 sulfur cluster binding;0.0259545262748828!GO:0022408;negative regulation of cell-cell adhesion;0.0260457892325974!GO:0008147;structural constituent of bone;0.0266736517773694!GO:0005637;nuclear inner membrane;0.0269268078675162!GO:0045926;negative regulation of growth;0.0273025784745223!GO:0042168;heme metabolic process;0.0277364318673705!GO:0004287;prolyl oligopeptidase activity;0.0277364318673705!GO:0006261;DNA-dependent DNA replication;0.0278367455998211!GO:0051101;regulation of DNA binding;0.0284192950661053!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0293313978633372!GO:0043068;positive regulation of programmed cell death;0.0296105586504095!GO:0006505;GPI anchor metabolic process;0.0296930351411574!GO:0005100;Rho GTPase activator activity;0.0298600187604579!GO:0033239;negative regulation of amine metabolic process;0.030072595227946!GO:0045763;negative regulation of amino acid metabolic process;0.030072595227946!GO:0001933;negative regulation of protein amino acid phosphorylation;0.030072595227946!GO:0006352;transcription initiation;0.0303270181373438!GO:0051493;regulation of cytoskeleton organization and biogenesis;0.0304603700740242!GO:0033043;regulation of organelle organization and biogenesis;0.0304603700740242!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.0305477735527675!GO:0008320;protein transmembrane transporter activity;0.0310352679759784!GO:0030508;thiol-disulfide exchange intermediate activity;0.0311714449648755!GO:0001516;prostaglandin biosynthetic process;0.0312315129493182!GO:0046457;prostanoid biosynthetic process;0.0312315129493182!GO:0005520;insulin-like growth factor binding;0.0315580968373618!GO:0006611;protein export from nucleus;0.0324530623015468!GO:0030503;regulation of cell redox homeostasis;0.0324530623015468!GO:0008652;amino acid biosynthetic process;0.0330894131543389!GO:0008064;regulation of actin polymerization and/or depolymerization;0.0332559065034585!GO:0008168;methyltransferase activity;0.0337592157764504!GO:0050811;GABA receptor binding;0.0337965786471224!GO:0008234;cysteine-type peptidase activity;0.0342352150606865!GO:0031543;peptidyl-proline dioxygenase activity;0.0342374421812552!GO:0003678;DNA helicase activity;0.0344548841601868!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0347433651894639!GO:0008629;induction of apoptosis by intracellular signals;0.0348045098081895!GO:0007030;Golgi organization and biogenesis;0.0348431492333409!GO:0050790;regulation of catalytic activity;0.0355096381346196!GO:0000209;protein polyubiquitination;0.0355308501363004!GO:0044420;extracellular matrix part;0.0358054851741153!GO:0005583;fibrillar collagen;0.0360647309498247!GO:0008022;protein C-terminus binding;0.0385494841766794!GO:0000082;G1/S transition of mitotic cell cycle;0.03868802040179!GO:0016741;transferase activity, transferring one-carbon groups;0.0387134347275861!GO:0006807;nitrogen compound metabolic process;0.0392947562676327!GO:0043414;biopolymer methylation;0.0399864288013334!GO:0040011;locomotion;0.0399864288013334!GO:0004860;protein kinase inhibitor activity;0.0399864288013334!GO:0016721;oxidoreductase activity, acting on superoxide radicals as acceptor;0.0399864288013334!GO:0004784;superoxide dismutase activity;0.0399864288013334!GO:0048037;cofactor binding;0.0399864288013334!GO:0000288;mRNA catabolic process, deadenylation-dependent decay;0.0399864288013334!GO:0051098;regulation of binding;0.0400302393762957!GO:0004228;gelatinase A activity;0.0401613667098423!GO:0001955;blood vessel maturation;0.0401613667098423!GO:0016614;oxidoreductase activity, acting on CH-OH group of donors;0.0409616046606998!GO:0009112;nucleobase metabolic process;0.0417466185454198!GO:0044255;cellular lipid metabolic process;0.0418911418122993!GO:0048144;fibroblast proliferation;0.0424192078208471!GO:0048145;regulation of fibroblast proliferation;0.0424192078208471!GO:0006417;regulation of translation;0.0424192078208471!GO:0000097;sulfur amino acid biosynthetic process;0.0424192078208471!GO:0030522;intracellular receptor-mediated signaling pathway;0.0429926234426904!GO:0030911;TPR domain binding;0.0430580309711308!GO:0051271;negative regulation of cell motility;0.043775771498873!GO:0001953;negative regulation of cell-matrix adhesion;0.0438536412735699!GO:0007178;transmembrane receptor protein serine/threonine kinase signaling pathway;0.0438603823775321!GO:0000287;magnesium ion binding;0.0438783010939068!GO:0008538;proteasome activator activity;0.0440889850935928!GO:0019798;procollagen-proline dioxygenase activity;0.0443031599859362!GO:0047485;protein N-terminus binding;0.0451285896179884!GO:0045936;negative regulation of phosphate metabolic process;0.0456433671283087!GO:0006644;phospholipid metabolic process;0.0462757189142453!GO:0051272;positive regulation of cell motility;0.0463107843296863!GO:0040017;positive regulation of locomotion;0.0463107843296863!GO:0047115;trans-1,2-dihydrobenzene-1,2-diol dehydrogenase activity;0.0467107979828524!GO:0030433;ER-associated protein catabolic process;0.046749092103161!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.046749092103161!GO:0003684;damaged DNA binding;0.0468965233564919!GO:0031371;ubiquitin conjugating enzyme complex;0.0470347180221595!GO:0040012;regulation of locomotion;0.0472012434547588!GO:0030833;regulation of actin filament polymerization;0.047379320802152!GO:0006779;porphyrin biosynthetic process;0.0475603790221473!GO:0033014;tetrapyrrole biosynthetic process;0.0475603790221473!GO:0030866;cortical actin cytoskeleton organization and biogenesis;0.0476157685631549!GO:0045334;clathrin-coated endocytic vesicle;0.0485581409965486!GO:0008097;5S rRNA binding;0.048784759734986!GO:0031418;L-ascorbic acid binding;0.049179172455723!GO:0030984;kininogen binding;0.0496304475677233!GO:0004213;cathepsin B activity;0.0496304475677233 | |||
|sample_id=11753 | |sample_id=11753 | ||
|sample_note= | |sample_note= | ||
| Line 76: | Line 100: | ||
|sample_tissue=heart | |sample_tissue=heart | ||
|top_motifs=ALX4:1.81388521006;XBP1:1.53869708896;TAL1_TCF{3,4,12}:1.52434032796;ESR1:1.38265883139;RXRA_VDR{dimer}:1.35411706469;UFEwm:1.29635504607;EBF1:1.27696240811;HOX{A5,B5}:1.25881465185;bHLH_family:1.24524401531;HOX{A4,D4}:1.2070836302;PAX1,9:1.202695718;MAFB:1.1971819692;RXR{A,B,G}:1.1599115754;EN1,2:1.13992849415;ZNF238:1.10046454776;NKX2-2,8:1.04328046169;HIF1A:1.01135230878;EVI1:1.0112031931;IKZF1:1.00437776042;TBX4,5:0.992594346703;TLX1..3_NFIC{dimer}:0.992062143634;HSF1,2:0.952197324479;TEAD1:0.9463023723;ATF6:0.945069392084;GLI1..3:0.927291820496;HES1:0.899504582017;SRF:0.894218455667;GFI1B:0.893337747898;GZF1:0.828391545072;KLF4:0.806263199377;NFE2L2:0.769464894209;POU3F1..4:0.75000992387;AIRE:0.734340123684;HMX1:0.728613713927;HLF:0.724364528889;STAT2,4,6:0.711170875863;LHX3,4:0.697881219148;NKX3-1:0.687878358995;NFE2L1:0.675515606965;NFATC1..3:0.674962355546;NKX2-1,4:0.657262372751;NKX3-2:0.655539880179;TFCP2:0.640393148973;GTF2I:0.62443459849;PAX4:0.558614326743;MYBL2:0.54884097881;PRDM1:0.544488352794;ZIC1..3:0.527879804367;SPZ1:0.523652417238;HAND1,2:0.514511795353;EGR1..3:0.477568588943;SMAD1..7,9:0.447718937818;GATA4:0.436757662804;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.421044788943;ESRRA:0.419665095621;NR3C1:0.41808407779;GCM1,2:0.415625716083;AHR_ARNT_ARNT2:0.406980147663;FOS_FOS{B,L1}_JUN{B,D}:0.370662632762;TP53:0.363836529575;ZBTB6:0.36213362198;ZNF423:0.360768094193;RFX1:0.3578329865;NFIX:0.347488802541;TFAP4:0.346987442297;PATZ1:0.341392016369;TOPORS:0.338592830424;TFAP2B:0.332443041333;SREBF1,2:0.331959654005;EP300:0.32165296065;RREB1:0.313929129619;PAX5:0.312685276773;NHLH1,2:0.303445216675;GTF2A1,2:0.28979370137;ZNF384:0.271536257517;MAZ:0.267324009631;HIC1:0.265736770338;STAT5{A,B}:0.248482757319;NR6A1:0.242003502904;DBP:0.240895389796;TEF:0.238524460376;FOXM1:0.236717491951;XCPE1{core}:0.227802859206;BACH2:0.208814234374;ZFP161:0.198183180784;FOSL2:0.190987987774;ZNF148:0.183294887695;ZBTB16:0.178319258338;MTE{core}:0.174528108157;MEF2{A,B,C,D}:0.173979753042;AR:0.172806736368;IRF1,2:0.16780941946;FOXL1:0.159970064677;ATF5_CREB3:0.154078985098;CREB1:0.136094788389;CEBPA,B_DDIT3:0.13136433975;NFE2:0.125545391112;TFAP2{A,C}:0.110516279219;MYFfamily:0.106865877087;BPTF:0.0852901939942;MZF1:0.0626870772568;HNF1A:0.0582291110848;PAX8:0.0516983942663;TBP:0.0493072258515;YY1:0.041913489968;PAX6:0.035462358281;SOX17:0.0338263899144;LEF1_TCF7_TCF7L1,2:0.0203025743448;FOXP3:0.0094506369471;VSX1,2:-0.00247048162314;PAX2:-0.0112896208789;NANOG{mouse}:-0.0136303877537;ELK1,4_GABP{A,B1}:-0.0157305903349;JUN:-0.0196518027084;FOX{I1,J2}:-0.0248557214051;FOXO1,3,4:-0.0293183132147;NKX6-1,2:-0.0386670073643;CDC5L:-0.0642089431338;ATF2:-0.0935788952151;ATF4:-0.103445087323;SP1:-0.113828704604;NRF1:-0.122214841229;STAT1,3:-0.125738184961;ONECUT1,2:-0.126700432731;ARID5B:-0.129653815388;TLX2:-0.132327945403;RORA:-0.140468772402;NR1H4:-0.150813442582;RUNX1..3:-0.163595217494;HNF4A_NR2F1,2:-0.192065393328;NFKB1_REL_RELA:-0.201790578265;FOXD3:-0.209796904658;HBP1_HMGB_SSRP1_UBTF:-0.213159162487;LMO2:-0.216903617833;ZNF143:-0.222597530826;HMGA1,2:-0.235737866653;MED-1{core}:-0.251799402915;POU6F1:-0.264184681961;REST:-0.289408820221;POU1F1:-0.296005052059;TFDP1:-0.311722257587;CDX1,2,4:-0.325826328251;MTF1:-0.330729736513;RFX2..5_RFXANK_RFXAP:-0.354939718935;IRF7:-0.372134957663;NFIL3:-0.372949107373;FOX{D1,D2}:-0.373037922962;GFI1:-0.398021505888;MYB:-0.425358426633;PRRX1,2:-0.437583703252;PAX3,7:-0.451179720126;TGIF1:-0.469199526557;ADNP_IRX_SIX_ZHX:-0.49675646408;SPI1:-0.51186217972;CRX:-0.53337541998;SOX2:-0.533725395318;PBX1:-0.554083330855;ETS1,2:-0.555808289969;ELF1,2,4:-0.560034144452;NR5A1,2:-0.575619824978;E2F1..5:-0.587584810929;HOX{A6,A7,B6,B7}:-0.599036395764;FOXA2:-0.605583434315;FOXP1:-0.626022536927;PPARG:-0.628176733864;POU5F1:-0.631095930704;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.646546939246;ALX1:-0.647233531586;BREu{core}:-0.649857056349;GATA6:-0.650018911839;SPIB:-0.698894695567;FOXN1:-0.743143045554;RBPJ:-0.757367203082;NFY{A,B,C}:-0.763184549787;DMAP1_NCOR{1,2}_SMARC:-0.807746175164;FOXQ1:-0.843116801088;MYOD1:-0.862167460844;SOX{8,9,10}:-0.889997072358;SNAI1..3:-0.956909638553;NKX2-3_NKX2-5:-0.971111795875;CUX2:-1.03919452991;ZEB1:-1.04715304658;HOXA9_MEIS1:-1.04843809271;OCT4_SOX2{dimer}:-1.06293605235;T:-1.06591853614;NANOG:-1.07245812535;SOX5:-1.08389969375;PDX1:-1.2035290551;PITX1..3:-1.25077162497;FOX{F1,F2,J1}:-1.3353626437;POU2F1..3:-1.42523708218;IKZF2:-1.45330601371 | |top_motifs=ALX4:1.81388521006;XBP1:1.53869708896;TAL1_TCF{3,4,12}:1.52434032796;ESR1:1.38265883139;RXRA_VDR{dimer}:1.35411706469;UFEwm:1.29635504607;EBF1:1.27696240811;HOX{A5,B5}:1.25881465185;bHLH_family:1.24524401531;HOX{A4,D4}:1.2070836302;PAX1,9:1.202695718;MAFB:1.1971819692;RXR{A,B,G}:1.1599115754;EN1,2:1.13992849415;ZNF238:1.10046454776;NKX2-2,8:1.04328046169;HIF1A:1.01135230878;EVI1:1.0112031931;IKZF1:1.00437776042;TBX4,5:0.992594346703;TLX1..3_NFIC{dimer}:0.992062143634;HSF1,2:0.952197324479;TEAD1:0.9463023723;ATF6:0.945069392084;GLI1..3:0.927291820496;HES1:0.899504582017;SRF:0.894218455667;GFI1B:0.893337747898;GZF1:0.828391545072;KLF4:0.806263199377;NFE2L2:0.769464894209;POU3F1..4:0.75000992387;AIRE:0.734340123684;HMX1:0.728613713927;HLF:0.724364528889;STAT2,4,6:0.711170875863;LHX3,4:0.697881219148;NKX3-1:0.687878358995;NFE2L1:0.675515606965;NFATC1..3:0.674962355546;NKX2-1,4:0.657262372751;NKX3-2:0.655539880179;TFCP2:0.640393148973;GTF2I:0.62443459849;PAX4:0.558614326743;MYBL2:0.54884097881;PRDM1:0.544488352794;ZIC1..3:0.527879804367;SPZ1:0.523652417238;HAND1,2:0.514511795353;EGR1..3:0.477568588943;SMAD1..7,9:0.447718937818;GATA4:0.436757662804;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.421044788943;ESRRA:0.419665095621;NR3C1:0.41808407779;GCM1,2:0.415625716083;AHR_ARNT_ARNT2:0.406980147663;FOS_FOS{B,L1}_JUN{B,D}:0.370662632762;TP53:0.363836529575;ZBTB6:0.36213362198;ZNF423:0.360768094193;RFX1:0.3578329865;NFIX:0.347488802541;TFAP4:0.346987442297;PATZ1:0.341392016369;TOPORS:0.338592830424;TFAP2B:0.332443041333;SREBF1,2:0.331959654005;EP300:0.32165296065;RREB1:0.313929129619;PAX5:0.312685276773;NHLH1,2:0.303445216675;GTF2A1,2:0.28979370137;ZNF384:0.271536257517;MAZ:0.267324009631;HIC1:0.265736770338;STAT5{A,B}:0.248482757319;NR6A1:0.242003502904;DBP:0.240895389796;TEF:0.238524460376;FOXM1:0.236717491951;XCPE1{core}:0.227802859206;BACH2:0.208814234374;ZFP161:0.198183180784;FOSL2:0.190987987774;ZNF148:0.183294887695;ZBTB16:0.178319258338;MTE{core}:0.174528108157;MEF2{A,B,C,D}:0.173979753042;AR:0.172806736368;IRF1,2:0.16780941946;FOXL1:0.159970064677;ATF5_CREB3:0.154078985098;CREB1:0.136094788389;CEBPA,B_DDIT3:0.13136433975;NFE2:0.125545391112;TFAP2{A,C}:0.110516279219;MYFfamily:0.106865877087;BPTF:0.0852901939942;MZF1:0.0626870772568;HNF1A:0.0582291110848;PAX8:0.0516983942663;TBP:0.0493072258515;YY1:0.041913489968;PAX6:0.035462358281;SOX17:0.0338263899144;LEF1_TCF7_TCF7L1,2:0.0203025743448;FOXP3:0.0094506369471;VSX1,2:-0.00247048162314;PAX2:-0.0112896208789;NANOG{mouse}:-0.0136303877537;ELK1,4_GABP{A,B1}:-0.0157305903349;JUN:-0.0196518027084;FOX{I1,J2}:-0.0248557214051;FOXO1,3,4:-0.0293183132147;NKX6-1,2:-0.0386670073643;CDC5L:-0.0642089431338;ATF2:-0.0935788952151;ATF4:-0.103445087323;SP1:-0.113828704604;NRF1:-0.122214841229;STAT1,3:-0.125738184961;ONECUT1,2:-0.126700432731;ARID5B:-0.129653815388;TLX2:-0.132327945403;RORA:-0.140468772402;NR1H4:-0.150813442582;RUNX1..3:-0.163595217494;HNF4A_NR2F1,2:-0.192065393328;NFKB1_REL_RELA:-0.201790578265;FOXD3:-0.209796904658;HBP1_HMGB_SSRP1_UBTF:-0.213159162487;LMO2:-0.216903617833;ZNF143:-0.222597530826;HMGA1,2:-0.235737866653;MED-1{core}:-0.251799402915;POU6F1:-0.264184681961;REST:-0.289408820221;POU1F1:-0.296005052059;TFDP1:-0.311722257587;CDX1,2,4:-0.325826328251;MTF1:-0.330729736513;RFX2..5_RFXANK_RFXAP:-0.354939718935;IRF7:-0.372134957663;NFIL3:-0.372949107373;FOX{D1,D2}:-0.373037922962;GFI1:-0.398021505888;MYB:-0.425358426633;PRRX1,2:-0.437583703252;PAX3,7:-0.451179720126;TGIF1:-0.469199526557;ADNP_IRX_SIX_ZHX:-0.49675646408;SPI1:-0.51186217972;CRX:-0.53337541998;SOX2:-0.533725395318;PBX1:-0.554083330855;ETS1,2:-0.555808289969;ELF1,2,4:-0.560034144452;NR5A1,2:-0.575619824978;E2F1..5:-0.587584810929;HOX{A6,A7,B6,B7}:-0.599036395764;FOXA2:-0.605583434315;FOXP1:-0.626022536927;PPARG:-0.628176733864;POU5F1:-0.631095930704;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.646546939246;ALX1:-0.647233531586;BREu{core}:-0.649857056349;GATA6:-0.650018911839;SPIB:-0.698894695567;FOXN1:-0.743143045554;RBPJ:-0.757367203082;NFY{A,B,C}:-0.763184549787;DMAP1_NCOR{1,2}_SMARC:-0.807746175164;FOXQ1:-0.843116801088;MYOD1:-0.862167460844;SOX{8,9,10}:-0.889997072358;SNAI1..3:-0.956909638553;NKX2-3_NKX2-5:-0.971111795875;CUX2:-1.03919452991;ZEB1:-1.04715304658;HOXA9_MEIS1:-1.04843809271;OCT4_SOX2{dimer}:-1.06293605235;T:-1.06591853614;NANOG:-1.07245812535;SOX5:-1.08389969375;PDX1:-1.2035290551;PITX1..3:-1.25077162497;FOX{F1,F2,J1}:-1.3353626437;POU2F1..3:-1.42523708218;IKZF2:-1.45330601371 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11753-123G7;search_select_hide=table117:FF:11753-123G7 | |||
}} | }} | ||
Latest revision as of 18:17, 4 June 2020
| Name: | mesenchymal precursor cell - cardiac, donor2 |
|---|---|
| Species: | Human (Homo sapiens) |
| Library ID: | CNhs12369 |
| Sample type: | primary cells |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| FANTOM CAT: | 1, 2, 3, 4, 5, 6, 7, 8 |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
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Sample information
RNA information
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| Download raw sequence, BAM & CTSS | ||||||||||||||
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12369
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12369
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.664 |
| 10 | 10 | 0.818 |
| 100 | 100 | 0.519 |
| 101 | 101 | 0.526 |
| 102 | 102 | 0.0523 |
| 103 | 103 | 0.825 |
| 104 | 104 | 0.913 |
| 105 | 105 | 0.216 |
| 106 | 106 | 0.957 |
| 107 | 107 | 0.618 |
| 108 | 108 | 0.0739 |
| 109 | 109 | 0.464 |
| 11 | 11 | 0.868 |
| 110 | 110 | 0.114 |
| 111 | 111 | 0.273 |
| 112 | 112 | 0.44 |
| 113 | 113 | 0.00123 |
| 114 | 114 | 0.957 |
| 115 | 115 | 0.384 |
| 116 | 116 | 0.0706 |
| 117 | 117 | 0.652 |
| 118 | 118 | 0.413 |
| 119 | 119 | 0.199 |
| 12 | 12 | 0.882 |
| 120 | 120 | 0.228 |
| 121 | 121 | 0.822 |
| 122 | 122 | 0.0283 |
| 123 | 123 | 4.06629e-4 |
| 124 | 124 | 0.172 |
| 125 | 125 | 0.169 |
| 126 | 126 | 0.356 |
| 127 | 127 | 0.47 |
| 128 | 128 | 0.329 |
| 129 | 129 | 0.596 |
| 13 | 13 | 0.941 |
| 130 | 130 | 0.528 |
| 131 | 131 | 0.592 |
| 132 | 132 | 0.646 |
| 133 | 133 | 0.891 |
| 134 | 134 | 0.211 |
| 135 | 135 | 0.412 |
| 136 | 136 | 0.869 |
| 137 | 137 | 0.175 |
| 138 | 138 | 0.586 |
| 139 | 139 | 0.553 |
| 14 | 14 | 0.185 |
| 140 | 140 | 0.837 |
| 141 | 141 | 0.935 |
| 142 | 142 | 0.928 |
| 143 | 143 | 0.857 |
| 144 | 144 | 0.289 |
| 145 | 145 | 0.984 |
| 146 | 146 | 0.726 |
| 147 | 147 | 0.0735 |
| 148 | 148 | 0.862 |
| 149 | 149 | 0.0957 |
| 15 | 15 | 0.739 |
| 150 | 150 | 0.593 |
| 151 | 151 | 0.958 |
| 152 | 152 | 0.349 |
| 153 | 153 | 0.272 |
| 154 | 154 | 0.902 |
| 155 | 155 | 0.0114 |
| 156 | 156 | 0.162 |
| 157 | 157 | 0.887 |
| 158 | 158 | 0.00563 |
| 159 | 159 | 0.176 |
| 16 | 16 | 0.0185 |
| 160 | 160 | 0.933 |
| 161 | 161 | 0.571 |
| 162 | 162 | 0.776 |
| 163 | 163 | 0.257 |
| 164 | 164 | 0.0708 |
| 165 | 165 | 0.664 |
| 166 | 166 | 0.0319 |
| 167 | 167 | 0.322 |
| 168 | 168 | 0.664 |
| 169 | 169 | 0.105 |
| 17 | 17 | 0.786 |
| 18 | 18 | 0.112 |
| 19 | 19 | 0.02 |
| 2 | 2 | 0.238 |
| 20 | 20 | 0.687 |
| 21 | 21 | 0.103 |
| 22 | 22 | 0.212 |
| 23 | 23 | 0.13 |
| 24 | 24 | 0.18 |
| 25 | 25 | 0.0661 |
| 26 | 26 | 0.758 |
| 27 | 27 | 0.863 |
| 28 | 28 | 0.129 |
| 29 | 29 | 0.283 |
| 3 | 3 | 0.779 |
| 30 | 30 | 0.49 |
| 31 | 31 | 0.607 |
| 32 | 32 | 1.18215e-13 |
| 33 | 33 | 0.715 |
| 34 | 34 | 0.764 |
| 35 | 35 | 0.928 |
| 36 | 36 | 0.0135 |
| 37 | 37 | 0.176 |
| 38 | 38 | 0.195 |
| 39 | 39 | 0.18 |
| 4 | 4 | 0.0141 |
| 40 | 40 | 0.0317 |
| 41 | 41 | 0.638 |
| 42 | 42 | 0.164 |
| 43 | 43 | 0.984 |
| 44 | 44 | 0.732 |
| 45 | 45 | 0.885 |
| 46 | 46 | 0.803 |
| 47 | 47 | 0.19 |
| 48 | 48 | 0.487 |
| 49 | 49 | 0.147 |
| 5 | 5 | 0.982 |
| 50 | 50 | 0.811 |
| 51 | 51 | 0.875 |
| 52 | 52 | 0.673 |
| 53 | 53 | 0.0704 |
| 54 | 54 | 0.745 |
| 55 | 55 | 0.106 |
| 56 | 56 | 0.66 |
| 57 | 57 | 0.596 |
| 58 | 58 | 0.133 |
| 59 | 59 | 0.638 |
| 6 | 6 | 0.686 |
| 60 | 60 | 0.698 |
| 61 | 61 | 0.667 |
| 62 | 62 | 0.217 |
| 63 | 63 | 0.759 |
| 64 | 64 | 0.485 |
| 65 | 65 | 0.973 |
| 66 | 66 | 0.123 |
| 67 | 67 | 0.5 |
| 68 | 68 | 0.264 |
| 69 | 69 | 0.672 |
| 7 | 7 | 0.0923 |
| 70 | 70 | 0.928 |
| 71 | 71 | 0.651 |
| 72 | 72 | 0.372 |
| 73 | 73 | 0.164 |
| 74 | 74 | 0.0591 |
| 75 | 75 | 0.701 |
| 76 | 76 | 0.396 |
| 77 | 77 | 0.157 |
| 78 | 78 | 0.0188 |
| 79 | 79 | 0.0237 |
| 8 | 8 | 0.426 |
| 80 | 80 | 0.325 |
| 81 | 81 | 0.604 |
| 82 | 82 | 0.892 |
| 83 | 83 | 0.721 |
| 84 | 84 | 0.978 |
| 85 | 85 | 0.0648 |
| 86 | 86 | 0.256 |
| 87 | 87 | 0.414 |
| 88 | 88 | 0.533 |
| 89 | 89 | 0.117 |
| 9 | 9 | 0.564 |
| 90 | 90 | 0.603 |
| 91 | 91 | 0.865 |
| 92 | 92 | 0.211 |
| 93 | 93 | 0.608 |
| 94 | 94 | 0.886 |
| 95 | 95 | 0.616 |
| 96 | 96 | 0.484 |
| 97 | 97 | 0.302 |
| 98 | 98 | 0.106 |
| 99 | 99 | 0.292 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs12369
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0000271 human cardiac mesenchymal precursor cell sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000723 (somatic stem cell)
0000048 (multi fate stem cell)
0000548 (animal cell)
0002320 (connective tissue cell)
0002371 (somatic cell)
0000219 (motile cell)
0000134 (mesenchymal cell)
0000255 (eukaryotic cell)
0002494 (cardiocyte)
0000034 (stem cell)
0000569 (cardiac mesenchymal cell)
UBERON: Anatomy
0000468 (multi-cellular organism)
0007100 (primary circulatory organ)
0000948 (heart)
0002384 (connective tissue)
0000479 (tissue)
0010314 (structure with developmental contribution from neural crest)
0000062 (organ)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0003103 (compound organ)
0010317 (germ layer / neural crest derived structure)
0004535 (cardiovascular system)
0001009 (circulatory system)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000271 (human cardiac mesenchymal precursor cell sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000133 (neurectodermal cell)
CL:0000134 (mesenchymal cell)
CL:0000011 (migratory trunk neural crest cell)
CL:0000221 (ectodermal cell)
