FFCP PHASE1:Mm9::chr11:62388075..62388086,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=22368 | |EntrezGene=22368 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=123 | |||
|TSSclassifier=NA | |||
|UniProt=Q9WTR1 | |UniProt=Q9WTR1 | ||
|association_with_transcript=35bp_to_ENSMUST00000018651_5end | |association_with_transcript=35bp_to_ENSMUST00000018651_5end | ||
|cluster_id=chr11:62388075..62388086,+ | |||
|description=CAGE_peak_7_at_Trpv2_5end | |description=CAGE_peak_7_at_Trpv2_5end | ||
|id=chr11:62388075..62388086,+ | |id=chr11:62388075..62388086,+ | ||
|ontology_enrichment_celltype=CL:0000988!2.40e-15!32;CL:0002032!2.40e-15!32;CL:0000037!2.40e-15!32;CL:0000566!2.40e-15!32;CL:0000837!2.40e-15!32;CL:0002031!3.19e-11!25;CL:0002320!2.70e-10!46;CL:0000134!2.70e-10!46;CL:0000738!2.78e-09!17;CL:0002087!2.78e-09!17;CL:0000049!9.35e-09!19;CL:0000838!1.09e-08!12;CL:0000542!8.60e-08!13;CL:0000051!8.60e-08!13;CL:0000084!1.31e-07!11;CL:0000827!1.31e-07!11;CL:0000219!1.35e-07!54 | |ontology_enrichment_celltype=CL:0000988!2.40e-15!32;CL:0002032!2.40e-15!32;CL:0000037!2.40e-15!32;CL:0000566!2.40e-15!32;CL:0000837!2.40e-15!32;CL:0002031!3.19e-11!25;CL:0002320!2.70e-10!46;CL:0000134!2.70e-10!46;CL:0000738!2.78e-09!17;CL:0002087!2.78e-09!17;CL:0000049!9.35e-09!19;CL:0000838!1.09e-08!12;CL:0000542!8.60e-08!13;CL:0000051!8.60e-08!13;CL:0000084!1.31e-07!11;CL:0000827!1.31e-07!11;CL:0000219!1.35e-07!54 | ||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.33e-21,32;CL:0002032,1.33e-21,32;CL:0000037,1.33e-21,32;CL:0000837,1.33e-21,32;CL:0002320,1.97e-15,46;CL:0000134,1.97e-15,46;CL:0002031,6.36e-15,25;CL:0000738,9.18e-14,17;CL:0002087,9.18e-14,17;CL:0000838,2.09e-13,12;CL:0000219,1.65e-12,54;CL:0000542,2.90e-12,13;CL:0000051,2.90e-12,13;CL:0000084,3.20e-11,11;CL:0000827,3.20e-11,11;CL:0000049,1.18e-10,19;CL:0000034,1.51e-07,97;CL:0000791,4.48e-07,9;CL:0000789,4.48e-07,9;CL:0002420,4.48e-07,9;CL:0002419,4.48e-07,9;CL:0000790,4.48e-07,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!9.02e-26!48;UBERON:0002390!3.61e-23!45;UBERON:0003061!3.61e-23!45;UBERON:0002405!1.22e-17!70;UBERON:0004177!2.02e-14!29;UBERON:0003408!7.00e-14!24;UBERON:0002370!3.87e-13!23;UBERON:0000974!3.87e-13!23;UBERON:0004807!3.87e-13!23;UBERON:0005058!3.87e-13!23;UBERON:0003351!3.87e-13!23;UBERON:0009113!3.87e-13!23;UBERON:0003295!3.87e-13!23;UBERON:0009722!3.87e-13!23;UBERON:0005562!3.87e-13!23;UBERON:0007690!3.87e-13!23;UBERON:0006562!2.47e-12!24;UBERON:0001557!2.47e-12!24;UBERON:0001042!2.47e-12!24;UBERON:0008814!2.47e-12!24;UBERON:0009145!2.47e-12!24;UBERON:0002384!2.70e-10!46;UBERON:0000072!2.72e-10!27;UBERON:0003081!2.75e-10!88;UBERON:0002371!2.38e-09!16;UBERON:0001004!1.25e-08!42;UBERON:0005057!4.16e-08!51;UBERON:0000065!4.60e-08!41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.48e-23,48;UBERON:0002405,1.48e-23,48;UBERON:0002390,4.63e-23,45;UBERON:0003061,4.63e-23,45;UBERON:0002370,1.48e-17,23;UBERON:0000974,1.48e-17,23;UBERON:0004807,1.48e-17,23;UBERON:0005058,1.48e-17,23;UBERON:0003351,1.48e-17,23;UBERON:0009113,1.48e-17,23;UBERON:0003295,1.48e-17,23;UBERON:0009722,1.48e-17,23;UBERON:0005562,1.48e-17,23;UBERON:0007690,1.48e-17,23;UBERON:0006562,1.06e-16,24;UBERON:0003408,1.06e-16,24;UBERON:0001557,1.06e-16,24;UBERON:0001042,1.06e-16,24;UBERON:0008814,1.06e-16,24;UBERON:0009145,1.06e-16,24;UBERON:0002384,1.97e-15,46;UBERON:0004177,2.34e-15,29;UBERON:0005057,2.34e-15,29;UBERON:0000072,1.65e-14,27;UBERON:0000077,3.59e-12,35;UBERON:0007811,3.83e-10,36;UBERON:0003081,1.71e-09,87;UBERON:0000065,1.49e-08,41;UBERON:0002371,2.53e-08,16;UBERON:0001004,2.78e-08,42;UBERON:0000153,5.05e-08,43 | |||
|phase1_expression=0,0,0,0,0,0,0,4.00282302668886,0,0.234064526321993,0.171217968225505,0,7.36163138704185,4.72070173062586,0.666219523631325,0.809901069559304,0,2.20823515750766,3.01651753932625,2.97072756258621,0.17008658030214,6.35462087685666,9.92559198727954,0.319984845586813,0.91763712426868,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523523743973798,1.76469446409304,0.683045484958446,0,0,0,0,0,0,0,0,0,0,5.70460860596304,1.45072428402269,4.7053131879945,0,0,0,0,0,0,0,0,1.3498495759221,0.988866362566974,0,0.299600110518405,0,0,0,0,0,0.220868540951614,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,3.10725460376606,0.148442139064825,0,0.304465478312141,0,0,0,0,0,0,0,0,0.220841518460394,0,0,0,0,0,1.7972268675888,1.19980546198682,1.77898317902291,0,0.457500602818626,0,0,0,0,0,0,0.248813941220186,0,0,0,0,0.180062129805349,0,0,0,0,0,0,0,0,0,0,0,0,0,2.80885274925294,1.54408744268829,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0,0,0,0,0,0.128867461322093,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0.324270453550071,0,0,0.744281895337007,0.624075346229121,0,0.179397413521912,0,0.369506380333209,0,0,0,0,0,0,0,0,0,0,0.491589944147214,0.863424909329478,0.433947175744535,1.50791283939272,2.71952841909355,0.491764273019036,0.275936746304732,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.119372344003136,0,0.291480836629851,0,1.53783792718067,0,0.370389054739423,0,0.27338845544205,0.915112692826091,1.69978429993855,2.23922323717853,2.3493995546752,0,0,0,0,0,0,0,0,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,2.8441000856536,0.202725215290164,0.616265742988964,0.51968329191118,4.29664069601955,4.76835251475036,5.28859977887863,4.72606486958647,5.14928894735553,5.18206285253999,5.34378781225255,3.60594158737084,4.71438024037614,10.6357980985228,0,0,0,0,0,0,0,0.214368379079066,0.501572104035363,0,0,0,0,0,0,0,0.45032120322422,0,0,0,0,0,0,0,0.183843508450014,0.222246727801615,0,0,0,0,0,0,0,0.114870937911227,0,0,0,0.412085900803307,0,0,0.177475806159338,0,0,0,0.0846146078916765,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0.191288332068843,0,0 | |phase1_expression=0,0,0,0,0,0,0,4.00282302668886,0,0.234064526321993,0.171217968225505,0,7.36163138704185,4.72070173062586,0.666219523631325,0.809901069559304,0,2.20823515750766,3.01651753932625,2.97072756258621,0.17008658030214,6.35462087685666,9.92559198727954,0.319984845586813,0.91763712426868,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523523743973798,1.76469446409304,0.683045484958446,0,0,0,0,0,0,0,0,0,0,5.70460860596304,1.45072428402269,4.7053131879945,0,0,0,0,0,0,0,0,1.3498495759221,0.988866362566974,0,0.299600110518405,0,0,0,0,0,0.220868540951614,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,3.10725460376606,0.148442139064825,0,0.304465478312141,0,0,0,0,0,0,0,0,0.220841518460394,0,0,0,0,0,1.7972268675888,1.19980546198682,1.77898317902291,0,0.457500602818626,0,0,0,0,0,0,0.248813941220186,0,0,0,0,0.180062129805349,0,0,0,0,0,0,0,0,0,0,0,0,0,2.80885274925294,1.54408744268829,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0,0,0,0,0,0.128867461322093,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0.324270453550071,0,0,0.744281895337007,0.624075346229121,0,0.179397413521912,0,0.369506380333209,0,0,0,0,0,0,0,0,0,0,0.491589944147214,0.863424909329478,0.433947175744535,1.50791283939272,2.71952841909355,0.491764273019036,0.275936746304732,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.119372344003136,0,0.291480836629851,0,1.53783792718067,0,0.370389054739423,0,0.27338845544205,0.915112692826091,1.69978429993855,2.23922323717853,2.3493995546752,0,0,0,0,0,0,0,0,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,2.8441000856536,0.202725215290164,0.616265742988964,0.51968329191118,4.29664069601955,4.76835251475036,5.28859977887863,4.72606486958647,5.14928894735553,5.18206285253999,5.34378781225255,3.60594158737084,4.71438024037614,10.6357980985228,0,0,0,0,0,0,0,0.214368379079066,0.501572104035363,0,0,0,0,0,0,0,0.45032120322422,0,0,0,0,0,0,0,0.183843508450014,0.222246727801615,0,0,0,0,0,0,0,0.114870937911227,0,0,0,0.412085900803307,0,0,0.177475806159338,0,0,0,0.0846146078916765,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0.191288332068843,0,0 | ||
|short_description=p7@Trpv2 | |short_description=p7@Trpv2 | ||
}} | }} |
Latest revision as of 21:17, 1 October 2015
Short description: | p7@Trpv2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Trpv2_5end |
Coexpression cluster: | MCL_coexpression_mm9:123 |
Association with transcript: | 35bp_to_ENSMUST00000018651_5end |
EntrezGene: | Trpv2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 1.33e-21 | 32 |
hematopoietic oligopotent progenitor cell | 1.33e-21 | 32 |
hematopoietic stem cell | 1.33e-21 | 32 |
hematopoietic multipotent progenitor cell | 1.33e-21 | 32 |
connective tissue cell | 1.97e-15 | 46 |
mesenchymal cell | 1.97e-15 | 46 |
hematopoietic lineage restricted progenitor cell | 6.36e-15 | 25 |
leukocyte | 9.18e-14 | 17 |
nongranular leukocyte | 9.18e-14 | 17 |
lymphoid lineage restricted progenitor cell | 2.09e-13 | 12 |
motile cell | 1.65e-12 | 54 |
lymphocyte | 2.90e-12 | 13 |
common lymphoid progenitor | 2.90e-12 | 13 |
T cell | 3.20e-11 | 11 |
pro-T cell | 3.20e-11 | 11 |
common myeloid progenitor | 1.18e-10 | 19 |
stem cell | 1.51e-07 | 97 |
mature alpha-beta T cell | 4.48e-07 | 9 |
alpha-beta T cell | 4.48e-07 | 9 |
immature T cell | 4.48e-07 | 9 |
mature T cell | 4.48e-07 | 9 |
immature alpha-beta T cell | 4.48e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.48e-23 | 48 |
immune system | 1.48e-23 | 48 |
hematopoietic system | 4.63e-23 | 45 |
blood island | 4.63e-23 | 45 |
thymus | 1.48e-17 | 23 |
neck | 1.48e-17 | 23 |
respiratory system epithelium | 1.48e-17 | 23 |
hemolymphoid system gland | 1.48e-17 | 23 |
pharyngeal epithelium | 1.48e-17 | 23 |
thymic region | 1.48e-17 | 23 |
pharyngeal gland | 1.48e-17 | 23 |
entire pharyngeal arch endoderm | 1.48e-17 | 23 |
thymus primordium | 1.48e-17 | 23 |
early pharyngeal endoderm | 1.48e-17 | 23 |
pharynx | 1.06e-16 | 24 |
gland of gut | 1.06e-16 | 24 |
upper respiratory tract | 1.06e-16 | 24 |
chordate pharynx | 1.06e-16 | 24 |
pharyngeal arch system | 1.06e-16 | 24 |
pharyngeal region of foregut | 1.06e-16 | 24 |
connective tissue | 1.97e-15 | 46 |
hemopoietic organ | 2.34e-15 | 29 |
immune organ | 2.34e-15 | 29 |
segment of respiratory tract | 1.65e-14 | 27 |
mixed endoderm/mesoderm-derived structure | 3.59e-12 | 35 |
craniocervical region | 3.83e-10 | 36 |
lateral plate mesoderm | 1.71e-09 | 87 |
respiratory tract | 1.49e-08 | 41 |
bone marrow | 2.53e-08 | 16 |
respiratory system | 2.78e-08 | 42 |
anterior region of body | 5.05e-08 | 43 |