FFCP PHASE1:Hg19::chr10:71993114..71993128,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5464 | |EntrezGene=5464 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9226 | |HGNC=9226 | ||
|TSSclassifier=strong | |||
|UniProt=Q5SQT6 | |UniProt=Q5SQT6 | ||
|association_with_transcript=-21bp_to_ENST00000373230_5end | |association_with_transcript=-21bp_to_ENST00000373230_5end | ||
|cluster_id=chr10:71993114..71993128,- | |||
|description=CAGE_peak_3_at_PPA1_5end | |description=CAGE_peak_3_at_PPA1_5end | ||
|id=chr10:71993114..71993128,- | |id=chr10:71993114..71993128,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!3.91e-18!239;DOID:162!5.56e-18!235;DOID:2531!7.60e-15!51;DOID:0060083!7.60e-15!51;DOID:1240!6.06e-11!39;DOID:0050686!7.44e-10!137;DOID:8692!5.91e-08!31;DOID:0060058!4.67e-07!10;DOID:0050687!5.40e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:2531;1.76e-09;51!DOID:0060083;1.76e-09;51!DOID:1240;7.17e-09;39!DOID:8692;9.51e-08;31!DOID:0060058;5.00e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:14566,4.15e-18,239;DOID:162,5.89e-18,235;DOID:2531,7.58e-15,51;DOID:0060083,7.58e-15,51;DOID:1240,6.04e-11,39;DOID:0050686,7.56e-10,137;DOID:8692,5.90e-08,31;DOID:0060058,4.66e-07,10;DOID:0050687,5.55e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.69e-13!57;UBERON:0005068!1.69e-13!57;UBERON:0006241!1.69e-13!57;UBERON:0007135!1.69e-13!57;UBERON:0000073!7.51e-13!94;UBERON:0001016!7.51e-13!94;UBERON:0001017!1.75e-11!82;UBERON:0003080!2.53e-11!42;UBERON:0005743!3.17e-11!86;UBERON:0002616!4.07e-11!59;UBERON:0002780!7.77e-11!41;UBERON:0001890!7.77e-11!41;UBERON:0006240!7.77e-11!41;UBERON:0002020!1.67e-09!34;UBERON:0003528!1.67e-09!34;UBERON:0000955!1.89e-09!69;UBERON:0006238!1.89e-09!69;UBERON:0002346!5.25e-09!90;UBERON:0002791!1.55e-08!33;UBERON:0001893!1.58e-08!34;UBERON:0003075!3.33e-08!86;UBERON:0007284!3.33e-08!86;UBERON:0001869!4.54e-08!32;UBERON:0000924!6.14e-07!173;UBERON:0006601!6.14e-07!173;UBERON:0003056!6.64e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;4.54e-08;34!UBERON:0002020;4.54e-08;34!UBERON:0002780;6.05e-08;41!UBERON:0001890;6.05e-08;41!UBERON:0002791;6.41e-08;32!UBERON:0000073;1.69e-07;53!UBERON:0002616;1.69e-07;53!UBERON:0001869;1.75e-07;32!UBERON:0001893;4.35e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011216,1.72e-14,223;UBERON:0001049,5.11e-13,56;UBERON:0005068,5.11e-13,56;UBERON:0006241,5.11e-13,56;UBERON:0007135,5.11e-13,56;UBERON:0001016,1.06e-12,89;UBERON:0000073,4.44e-12,53;UBERON:0002616,4.44e-12,53;UBERON:0001017,4.50e-11,81;UBERON:0002780,7.75e-11,41;UBERON:0001890,7.75e-11,41;UBERON:0003080,7.75e-11,41;UBERON:0006240,7.75e-11,41;UBERON:0002346,8.99e-10,86;UBERON:0003528,1.67e-09,34;UBERON:0002020,1.67e-09,34;UBERON:0000955,4.72e-09,68;UBERON:0006238,4.72e-09,68;UBERON:0003075,6.14e-09,82;UBERON:0007284,6.14e-09,82;UBERON:0002791,1.40e-08,32;UBERON:0001893,1.57e-08,34;UBERON:0001869,4.53e-08,32;UBERON:0010314,2.18e-07,132;UBERON:0010371,2.96e-07,104;UBERON:0004121,5.30e-07,171;UBERON:0000924,5.30e-07,171;UBERON:0006601,5.30e-07,171;UBERON:0003056,5.89e-07,61 | |||
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| ||
|short_description=p3@PPA1 | |short_description=p3@PPA1 | ||
}} | }} |
Latest revision as of 01:48, 19 September 2015
Short description: | p3@PPA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PPA1_5end |
Coexpression cluster: | NA |
Association with transcript: | -21bp_to_ENST00000373230_5end |
EntrezGene: | PPA1 |
HGNC: | 9226 |
UniProt: | Q5SQT6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
organ system subdivision | 1.72e-14 | 223 |
neural tube | 5.11e-13 | 56 |
neural rod | 5.11e-13 | 56 |
future spinal cord | 5.11e-13 | 56 |
neural keel | 5.11e-13 | 56 |
nervous system | 1.06e-12 | 89 |
regional part of nervous system | 4.44e-12 | 53 |
regional part of brain | 4.44e-12 | 53 |
central nervous system | 4.50e-11 | 81 |
regional part of forebrain | 7.75e-11 | 41 |
forebrain | 7.75e-11 | 41 |
anterior neural tube | 7.75e-11 | 41 |
future forebrain | 7.75e-11 | 41 |
neurectoderm | 8.99e-10 | 86 |
brain grey matter | 1.67e-09 | 34 |
gray matter | 1.67e-09 | 34 |
brain | 4.72e-09 | 68 |
future brain | 4.72e-09 | 68 |
neural plate | 6.14e-09 | 82 |
presumptive neural plate | 6.14e-09 | 82 |
regional part of telencephalon | 1.40e-08 | 32 |
telencephalon | 1.57e-08 | 34 |
cerebral hemisphere | 4.53e-08 | 32 |
structure with developmental contribution from neural crest | 2.18e-07 | 132 |
ecto-epithelium | 2.96e-07 | 104 |
ectoderm-derived structure | 5.30e-07 | 171 |
ectoderm | 5.30e-07 | 171 |
presumptive ectoderm | 5.30e-07 | 171 |
pre-chordal neural plate | 5.89e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 4.15e-18 | 239 |
cancer | 5.89e-18 | 235 |
hematologic cancer | 7.58e-15 | 51 |
immune system cancer | 7.58e-15 | 51 |
leukemia | 6.04e-11 | 39 |
organ system cancer | 7.56e-10 | 137 |
myeloid leukemia | 5.90e-08 | 31 |
lymphoma | 4.66e-07 | 10 |
cell type cancer | 5.55e-07 | 143 |