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FFCP PHASE1:Mm9::chr12:114067697..114067715,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=71963
|EntrezGene=71963
|HGNC=
|HGNC=
|MCL_coexpression_id=381
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=-63bp_to_uc007pfj.1_5end
|association_with_transcript=-63bp_to_uc007pfj.1_5end
|cluster_id=chr12:114067697..114067715,-
|description=CAGE_peak_3_at_Cdca4_5end
|description=CAGE_peak_3_at_Cdca4_5end
|id=chr12:114067697..114067715,-
|id=chr12:114067697..114067715,-
|ontology_enrichment_celltype=CL:0000988!3.42e-12!32;CL:0002032!3.42e-12!32;CL:0000037!3.42e-12!32;CL:0000566!3.42e-12!32;CL:0000837!3.42e-12!32;CL:0002031!3.25e-09!25;CL:0002320!9.35e-09!46;CL:0000134!9.35e-09!46;CL:0000219!1.17e-07!54;CL:0000542!4.34e-07!13;CL:0000051!4.34e-07!13;CL:0000838!8.68e-07!12;CL:0000791!9.49e-07!9;CL:0000789!9.49e-07!9;CL:0002420!9.49e-07!9;CL:0002419!9.49e-07!9;CL:0000790!9.49e-07!9
|ontology_enrichment_celltype=CL:0000988!3.42e-12!32;CL:0002032!3.42e-12!32;CL:0000037!3.42e-12!32;CL:0000566!3.42e-12!32;CL:0000837!3.42e-12!32;CL:0002031!3.25e-09!25;CL:0002320!9.35e-09!46;CL:0000134!9.35e-09!46;CL:0000219!1.17e-07!54;CL:0000542!4.34e-07!13;CL:0000051!4.34e-07!13;CL:0000838!8.68e-07!12;CL:0000791!9.49e-07!9;CL:0000789!9.49e-07!9;CL:0002420!9.49e-07!9;CL:0002419!9.49e-07!9;CL:0000790!9.49e-07!9
|ontology_enrichment_celltype_v019_2=CL:0000988,1.23e-21,32;CL:0002032,1.23e-21,32;CL:0000037,1.23e-21,32;CL:0000837,1.23e-21,32;CL:0002031,1.24e-15,25;CL:0002320,5.44e-15,46;CL:0000134,5.44e-15,46;CL:0000219,1.17e-13,54;CL:0000791,3.57e-12,9;CL:0000789,3.57e-12,9;CL:0002420,3.57e-12,9;CL:0002419,3.57e-12,9;CL:0000790,3.57e-12,9;CL:0000542,1.99e-11,13;CL:0000051,1.99e-11,13;CL:0000624,2.04e-11,8;CL:0000049,2.35e-11,19;CL:0000838,8.40e-11,12;CL:0000050,2.58e-10,9;CL:0000084,1.60e-09,11;CL:0000827,1.60e-09,11;CL:0000893,2.32e-09,6;CL:0002489,2.32e-09,6;CL:0000898,2.32e-09,6;CL:0000809,2.32e-09,6;CL:0000810,2.32e-09,6;CL:0000895,2.32e-09,6;CL:0000808,2.32e-09,6;CL:0000894,2.32e-09,6;CL:0000806,2.32e-09,6;CL:0000807,2.32e-09,6;CL:0000805,2.32e-09,6;CL:0002425,2.32e-09,6;CL:0002436,2.32e-09,6;CL:0002427,2.32e-09,6;CL:0002428,2.32e-09,6;CL:0002429,2.32e-09,6;CL:0002433,2.32e-09,6;CL:0002431,2.32e-09,6;CL:0002432,2.32e-09,6;CL:0000763,7.54e-09,16;CL:0000738,5.02e-08,17;CL:0002087,5.02e-08,17;CL:0000553,1.70e-07,6;CL:0000556,1.70e-07,6
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002390!9.45e-13!45;UBERON:0003061!9.45e-13!45;UBERON:0002193!7.52e-12!48;UBERON:0004177!1.06e-10!29;UBERON:0002370!6.01e-10!23;UBERON:0000974!6.01e-10!23;UBERON:0004807!6.01e-10!23;UBERON:0005058!6.01e-10!23;UBERON:0003351!6.01e-10!23;UBERON:0009113!6.01e-10!23;UBERON:0003295!6.01e-10!23;UBERON:0009722!6.01e-10!23;UBERON:0005562!6.01e-10!23;UBERON:0007690!6.01e-10!23;UBERON:0006562!6.37e-09!24;UBERON:0003408!6.37e-09!24;UBERON:0001557!6.37e-09!24;UBERON:0001042!6.37e-09!24;UBERON:0008814!6.37e-09!24;UBERON:0009145!6.37e-09!24;UBERON:0002384!9.35e-09!46;UBERON:0000072!1.76e-08!27;UBERON:0003081!1.04e-07!88;UBERON:0002405!1.79e-07!70
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.76e-18,45;UBERON:0003061,2.76e-18,45;UBERON:0002370,3.33e-18,23;UBERON:0000974,3.33e-18,23;UBERON:0004807,3.33e-18,23;UBERON:0005058,3.33e-18,23;UBERON:0003351,3.33e-18,23;UBERON:0009113,3.33e-18,23;UBERON:0003295,3.33e-18,23;UBERON:0009722,3.33e-18,23;UBERON:0005562,3.33e-18,23;UBERON:0007690,3.33e-18,23;UBERON:0002193,9.16e-18,48;UBERON:0002405,9.16e-18,48;UBERON:0006562,3.46e-17,24;UBERON:0003408,3.46e-17,24;UBERON:0001557,3.46e-17,24;UBERON:0001042,3.46e-17,24;UBERON:0008814,3.46e-17,24;UBERON:0009145,3.46e-17,24;UBERON:0002384,5.44e-15,46;UBERON:0004177,7.52e-15,29;UBERON:0005057,7.52e-15,29;UBERON:0000072,1.33e-14,27;UBERON:0000077,3.05e-11,35;UBERON:0007811,1.67e-09,36;UBERON:0000065,2.09e-09,41;UBERON:0001004,4.85e-09,42;UBERON:0000153,4.27e-08,43;UBERON:0003081,4.53e-08,87;UBERON:0000926,1.96e-07,120;UBERON:0004120,1.96e-07,120;UBERON:0006603,1.96e-07,120
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0546902076653,0.592302255241736,0,0.263069711437843,0.271608227691724,0,0.237270036248348,0.394017929502254,0.409231043169689,0.154936841185966,0.385813221962283,0.249810577937946,1.16965804222704,0.214871054048298,0.191288332068843,0.661774257358546,0.695603506861264
|phase1_expression=0.480446541314382,0,0,0,0,0.16787927191189,0,3.09895976259783,4.78681655315667,4.44722600011788,4.79410311031414,5.42450681168288,2.39681021903688,3.58423649917889,1.99865857089398,1.01237633694913,1.39912375625629,1.89277299214943,3.29074640653773,5.09267582157636,2.12608225377674,0.794327609607082,0.261199789138935,0,0.22940928106717,0,0,0,0,0,0.443461021310609,1.27006134691926,1.23012957516914,15.8481681015439,0,0,0.204169356262369,0,0,0.523523743973798,1.76469446409304,0,1.45653105909346,0.377690453926732,0.608261587317087,0.367093504323363,0.782391344348039,0,0.219686182734472,0,0,1.43752564364972,5.03347818173209,1.45072428402269,1.34437519656986,0.257259436035947,0.286533439938757,0,0.606949382578793,0,0.633831403506179,0.677689064138264,0,0.449949858640699,0.988866362566974,0,0.299600110518405,0.384218305321555,0.933206510776299,0.540023753326763,0.210324961351382,0,0,0.61245399607477,0.287536413054709,0,0,0.127687338085188,0.153606533256243,0.395658863190582,0.640413505216868,0,0.279182999001381,0,0.15279824777681,0,0,0.186399445825301,1.21161909333094,0.529000920747499,0.869593466105033,0,1.3599426674155,0,0,0,0.561777680527007,0.852151612890289,1.29893002301434,0.35333957451034,0.14084341977668,0,2.54805239706646,0,0.649473123033642,0.253359865475099,0.505524445014783,0.34255163915718,1.03575153458869,0,0.346970653532272,0,0,0,0.117588707135705,0.376999773989026,0,0.433798070759735,1.76922110389975,0.161766849947409,0.441683036920787,0.484875253135222,0,0.292780797011547,0.209446706813455,0.255457055208591,1.55759661857696,2.39961092397363,1.01656181658452,0.149790639404823,0,0.376963056338593,0,0,0.20778804455956,0.162241263067758,0.509196819251581,1.11966273549084,0.252722758433675,0.420883711772948,0.910843100738926,0.459804208866946,0.540186389416048,0.30140963567143,0.884474488967262,0.896796041993948,0.374806898238915,0.258703370739016,2.37124792226126,0.756424320671277,0.527853372491847,0,0.278047249225598,0.696504333044333,0,0,1.40442637462647,1.02939162845886,2.27330799516474,0.621377317606506,1.40715635988658,0.720248245844059,0.473489471170421,0,0.308534225774757,0.232533944750408,0.268273401399619,0.350296027101508,0.329119699826961,0.820837320395476,0,0.292399974850665,0,0,0,0.102904612379284,0,0.264450566663544,1.06644125267617,0.696710015581316,0.644337306610467,0.201683524623343,0.444756087689741,0,0.474529061544512,0,0.251335208800269,0,0.38992817423824,1.79763881730844,0,0,1.13800740571849,0.799739588268102,1.1270773567308,0.203651327845314,0.581857461502877,0.49095073923223,0.189709611372772,0.147610147979602,0.470996183524124,0,0,0.667380422864376,0.589676985339609,0.449724224769707,0.405720242777006,1.4470629585145,1.01850340712568,0.575392274901621,0,0.274561413188081,0,0.744281895337007,0.312037673114561,0,0.179397413521912,0,0.369506380333209,1.13694847062291,0.814824882210129,1.01847051465113,0.234690248288502,0,0.238043640886014,0,0.788175720530955,0.44292937929755,0.797273843287435,0.491589944147214,0.345369963731791,0.144649058581512,0,0.54390568381871,0,0.275936746304732,0.160550589987792,0.117211686592203,0.819674726883377,0,0.94652465824877,0,0,0.477937595905104,0,0.283076530788832,0.404810701674894,0,0.395287777946524,0.642642632843614,0.425820255624806,0.712262414669021,0.977321756121456,0.329940245945071,1.32745138339963,0.242780636154981,0.604647113929502,0,0.590603785761546,0.307435147943927,0,0.363533729477506,0.356497378384721,0.632073515871632,0,0,0.340439605753788,0.900305470156551,0.646793418913773,0.428674070063185,0.709360934569094,0.713475270408282,0.658196082408484,0.304464949114599,0.23467170806371,0.42366414172764,0,1.15420377059036,0.484393280087717,0.542816324353403,0.835606408021955,0.492422699235184,0,0.18542530201051,0.683483523191411,0.412773735926445,0.740778109478847,0.941842285023455,0.546776910884101,2.0590035588587,4.07948231985253,2.93898049879682,3.86959926652387,0,0.632671987162271,0.203319467126849,0.324016022465404,0,0,0.539457385539283,0.165306911450672,0.26175594198403,0,0,6.20062232552609,0.448549638131936,1.32366792365678,1.55560950675238,1.16243841129958,0.844780627453891,0.821500670520278,0.5208175393758,1.46803082195995,6.76435538312817,5.18454011264158,0.948033361884535,1.62180172232131,0.616265742988964,1.29920822977795,1.79026695667481,3.57626438606277,3.72605893511903,1.62458479892035,2.62512769865184,2.362411006305,2.01652370273681,2.24153125701431,2.11666051608725,1.75315353272353,0,1.33191572024439,0.986852422704233,1.84673078000486,0.19318959403219,0.750729901804728,0.549454872801795,0.214368379079066,0.501572104035363,0,0,0,0,0,0,0.675022500231806,0.900642406448441,0,0,0.93408612825759,1.19707462020309,0.682934423016537,0.486213434136588,0.209613162627982,0.551530525350042,0,0,0.320919209591815,0.505394423527595,0,0.377252682772152,0.187283014939765,0.128050304809739,0.34461281373368,0,0.463537303779422,0.192909220463705,0.412085900803307,0.441596760403192,0,0.354951612318675,0,0.581385666529314,0.470546902076653,0.592302255241736,0,0.263069711437843,0.271608227691724,0,0.237270036248348,0.394017929502254,0.409231043169689,0.154936841185966,0.385813221962283,0.249810577937946,1.16965804222704,0.214871054048298,0.191288332068843,0.661774257358546,0.695603506861264
|short_description=p3@Cdca4
|short_description=p3@Cdca4
}}
}}

Latest revision as of 09:29, 26 September 2015

Short description:p3@Cdca4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Cdca4_5end
Coexpression cluster:MCL_coexpression_mm9:381
Association with transcript: -63bp_to_uc007pfj.1_5end
EntrezGene:Cdca4
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p3@Cdca4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E93.10
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E74.79
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F24.45
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E64.79
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F15.42
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E42.40
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E83.58
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A12.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.01
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A51.40
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.89
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A43.29
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A65.09
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.13
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.79
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.27
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H41.46
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.38
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.61
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A25.03
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I91.45
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.61
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.93
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.54
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.61
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.29
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.40
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.64
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.15
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D91.21
Mouse Schwann, donor2.CNhs12573.11746-123F90.53
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.87
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C41.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.85
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.30
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.65
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H91.04
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.43
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.56
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D12.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.02
corpora quadrigemina, adult.CNhs10501.16-22A40.15
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.38
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.21
diencephalon, neonate N30.CNhs11201.1388-42B20.16
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.51
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.12
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.91
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C60.88
eyeball, neonate N01.CNhs11140.1532-43E70.90
eyeball, neonate N02.CNhs11205.1551-44G80.37
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E22.37
forelimb, embryo E12.CNhs10600.359-14H20.76
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C81.40
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.03
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D52.27
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F51.41
heart, embryo E13.CNhs11013.376-3I90.72
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.82
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.10
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I51.07
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D80.64
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I91.14
kidney, embryo E15.CNhs10997.434-16F80.80
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.58
kidney, neonate N00.CNhs11214.646-21G70.49
kidney, neonate N10.CNhs11206.758-6D50.19
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.47
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.67
liver, embryo E13.CNhs10524.378-3H60.59
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F51.45
liver, embryo E17.CNhs10510.481-18A31.02
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G21.14
lung, embryo E14.CNhs10604.404-26F80.81
lung, embryo E15.CNhs11020.432-17C51.02
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.79
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.80
lung, neonate N20.CNhs11109.822-18A40.49
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C20.16
medulla oblongata, neonate N30.CNhs11200.1396-42A30.12
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.82
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.64
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H70.71
ovary, neonate N00.CNhs11217.1299-22I40.98
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.90
pituitary gland, embryo E13.CNhs11009.370-44C70.65
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.71
pituitary gland, embryo E16.CNhs11036.449-43F60.71
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C31.15
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H30.54
skin, neonate N06.CNhs11097.693-20I50.84
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.19
spleen, adult.CNhs10465.25-2G20.68
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.74
spleen, neonate N10.CNhs11116.752-24D10.94
spleen, neonate N20.CNhs11112.824-19H10.55
spleen, neonate N25.CNhs11099.1354-25G32.06
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C64.08
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C92.94
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D33.87
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.63
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.54
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G56.20
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C51.32
testis, embryo E16.CNhs11033.470-26G51.56
testis, embryo E17.CNhs11029.486-18I51.16
testis, embryo E18.CNhs11027.503-18G50.84
testis, neonate N00.CNhs11189.1300-22B70.82
testis, neonate N07.CNhs11222.726-26I40.52
testis, neonate N10.CNhs11204.763-44D91.47
testis, neonate N20.CNhs11110.839-18H36.76
testis, neonate N30.CNhs11130.1391-42E25.18
thymus, adult.CNhs10471.38-12B50.95
thymus, embryo E14.CNhs11041.402-44I41.62
thymus, embryo E15.CNhs11005.430-45I20.62
thymus, embryo E16.CNhs11002.456-26C51.30
thymus, embryo E17.CNhs10581.478-18C11.79
thymus, embryo E18.CNhs10595.1273-19G43.58
thymus, neonate N02.CNhs11181.1541-43F83.73
thymus, neonate N03.CNhs11137.2104-43C71.62
thymus, neonate N06.CNhs11197.681-26C42.63
thymus, neonate N07.CNhs11211.713-19D32.36
thymus, neonate N10.CNhs11194.748-24E42.02
thymus, neonate N20.CNhs11186.820-7A22.24
thymus, neonate N25.CNhs11125.1362-25G72.12
thymus, neonate N30.CNhs11132.1393-42G21.75
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.33
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.99
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.85
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.75
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.93
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H20.68
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.13
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B31.17
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.70





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
hematopoietic cell1.23e-2132
hematopoietic oligopotent progenitor cell1.23e-2132
hematopoietic stem cell1.23e-2132
hematopoietic multipotent progenitor cell1.23e-2132
hematopoietic lineage restricted progenitor cell1.24e-1525
connective tissue cell5.44e-1546
mesenchymal cell5.44e-1546
motile cell1.17e-1354
mature alpha-beta T cell3.57e-129
alpha-beta T cell3.57e-129
immature T cell3.57e-129
mature T cell3.57e-129
immature alpha-beta T cell3.57e-129
lymphocyte1.99e-1113
common lymphoid progenitor1.99e-1113
CD4-positive, alpha-beta T cell2.04e-118
common myeloid progenitor2.35e-1119
lymphoid lineage restricted progenitor cell8.40e-1112
megakaryocyte-erythroid progenitor cell2.58e-109
T cell1.60e-0911
pro-T cell1.60e-0911
thymocyte2.32e-096
double negative thymocyte2.32e-096
naive T cell2.32e-096
double-positive, alpha-beta thymocyte2.32e-096
CD4-positive, alpha-beta thymocyte2.32e-096
naive thymus-derived CD4-positive, alpha-beta T cell2.32e-096
DN4 thymocyte2.32e-096
DN1 thymic pro-T cell2.32e-096
DN2 thymocyte2.32e-096
DN3 thymocyte2.32e-096
immature single positive thymocyte2.32e-096
early T lineage precursor2.32e-096
mature CD4 single-positive thymocyte2.32e-096
resting double-positive thymocyte2.32e-096
double-positive blast2.32e-096
CD69-positive double-positive thymocyte2.32e-096
CD69-positive, CD4-positive single-positive thymocyte2.32e-096
CD4-positive, CD8-intermediate double-positive thymocyte2.32e-096
CD24-positive, CD4 single-positive thymocyte2.32e-096
myeloid cell7.54e-0916
leukocyte5.02e-0817
nongranular leukocyte5.02e-0817
megakaryocyte progenitor cell1.70e-076
megakaryocyte1.70e-076

Uber anatomy
Ontology termp-valuen
hematopoietic system2.76e-1845
blood island2.76e-1845
thymus3.33e-1823
neck3.33e-1823
respiratory system epithelium3.33e-1823
hemolymphoid system gland3.33e-1823
pharyngeal epithelium3.33e-1823
thymic region3.33e-1823
pharyngeal gland3.33e-1823
entire pharyngeal arch endoderm3.33e-1823
thymus primordium3.33e-1823
early pharyngeal endoderm3.33e-1823
hemolymphoid system9.16e-1848
immune system9.16e-1848
pharynx3.46e-1724
gland of gut3.46e-1724
upper respiratory tract3.46e-1724
chordate pharynx3.46e-1724
pharyngeal arch system3.46e-1724
pharyngeal region of foregut3.46e-1724
connective tissue5.44e-1546
hemopoietic organ7.52e-1529
immune organ7.52e-1529
segment of respiratory tract1.33e-1427
mixed endoderm/mesoderm-derived structure3.05e-1135
craniocervical region1.67e-0936
respiratory tract2.09e-0941
respiratory system4.85e-0942
anterior region of body4.27e-0843
lateral plate mesoderm4.53e-0887
mesoderm1.96e-07120
mesoderm-derived structure1.96e-07120
presumptive mesoderm1.96e-07120
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