FFCP PHASE1:Mm9::chr10:76880975..76881021,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=110532 | |EntrezGene=110532 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=Q91ZS8,Q3UHM7,Q3UUK2 | |UniProt=Q91ZS8,Q3UHM7,Q3UUK2 | ||
|association_with_transcript=0bp_to_ENSMUST00000020496,ENSMUST00000098374,ENSMUST00000105406,ENSMUST00000144547,ENSMUST00000150227,ENSMUST00000154607,NM_001024837,NM_130895,NR_004429,NR_021486,uc007fvl.2,uc007fvm.2,uc007fvn.2,uc007fvo.2,uc007fvp.2,uc007fvq.2,uc007fvr.1,uc007fvs.1_5end | |association_with_transcript=0bp_to_ENSMUST00000020496,ENSMUST00000098374,ENSMUST00000105406,ENSMUST00000144547,ENSMUST00000150227,ENSMUST00000154607,NM_001024837,NM_130895,NR_004429,NR_021486,uc007fvl.2,uc007fvm.2,uc007fvn.2,uc007fvo.2,uc007fvp.2,uc007fvq.2,uc007fvr.1,uc007fvs.1_5end | ||
|cluster_id=chr10:76880975..76881021,- | |||
|description=CAGE_peak_1_at_Adarb1_5end | |description=CAGE_peak_1_at_Adarb1_5end | ||
|id=chr10:76880975..76881021,- | |id=chr10:76880975..76881021,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000025!1.68e-22!114;UBERON:0004111!2.23e-22!122;UBERON:0001049!8.50e-13!52;UBERON:0005068!8.50e-13!52;UBERON:0006241!8.50e-13!52;UBERON:0007135!8.50e-13!52;UBERON:0000955!1.26e-12!50;UBERON:0006238!1.26e-12!50;UBERON:0000033!1.68e-12!63;UBERON:0000477!4.17e-12!154;UBERON:0002616!4.93e-12!49;UBERON:0002346!8.42e-12!71;UBERON:0003075!8.42e-12!71;UBERON:0007284!8.42e-12!71;UBERON:0004121!4.68e-10!102;UBERON:0000924!4.68e-10!102;UBERON:0006601!4.68e-10!102;UBERON:0002020!5.29e-10!34;UBERON:0000475!1.83e-09!200;UBERON:0003056!4.88e-09!49;UBERON:0003080!1.07e-08!40;UBERON:0001017!1.15e-08!73;UBERON:0005743!1.15e-08!73;UBERON:0000073!1.19e-08!75;UBERON:0001016!1.19e-08!75;UBERON:0000483!1.52e-08!181;UBERON:0002780!3.71e-08!39;UBERON:0001890!3.71e-08!39;UBERON:0006240!3.71e-08!39;UBERON:0002791!4.73e-08!29;UBERON:0003528!4.73e-08!29;UBERON:0001893!4.73e-08!29;UBERON:0000119!6.52e-08!183;UBERON:0002021!4.46e-07!10;UBERON:0000411!4.46e-07!10;UBERON:0001950!4.46e-07!10 | |ontology_enrichment_uberon=UBERON:0000025!1.68e-22!114;UBERON:0004111!2.23e-22!122;UBERON:0001049!8.50e-13!52;UBERON:0005068!8.50e-13!52;UBERON:0006241!8.50e-13!52;UBERON:0007135!8.50e-13!52;UBERON:0000955!1.26e-12!50;UBERON:0006238!1.26e-12!50;UBERON:0000033!1.68e-12!63;UBERON:0000477!4.17e-12!154;UBERON:0002616!4.93e-12!49;UBERON:0002346!8.42e-12!71;UBERON:0003075!8.42e-12!71;UBERON:0007284!8.42e-12!71;UBERON:0004121!4.68e-10!102;UBERON:0000924!4.68e-10!102;UBERON:0006601!4.68e-10!102;UBERON:0002020!5.29e-10!34;UBERON:0000475!1.83e-09!200;UBERON:0003056!4.88e-09!49;UBERON:0003080!1.07e-08!40;UBERON:0001017!1.15e-08!73;UBERON:0005743!1.15e-08!73;UBERON:0000073!1.19e-08!75;UBERON:0001016!1.19e-08!75;UBERON:0000483!1.52e-08!181;UBERON:0002780!3.71e-08!39;UBERON:0001890!3.71e-08!39;UBERON:0006240!3.71e-08!39;UBERON:0002791!4.73e-08!29;UBERON:0003528!4.73e-08!29;UBERON:0001893!4.73e-08!29;UBERON:0000119!6.52e-08!183;UBERON:0002021!4.46e-07!10;UBERON:0000411!4.46e-07!10;UBERON:0001950!4.46e-07!10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000025,1.54e-22,114;UBERON:0004111,2.06e-22,122;UBERON:0010314,1.91e-16,92;UBERON:0000073,4.04e-14,54;UBERON:0001049,8.13e-13,52;UBERON:0005068,8.13e-13,52;UBERON:0006241,8.13e-13,52;UBERON:0007135,8.13e-13,52;UBERON:0002346,1.09e-11,64;UBERON:0003075,1.09e-11,64;UBERON:0007284,1.09e-11,64;UBERON:0010371,2.29e-11,73;UBERON:0000955,7.98e-11,47;UBERON:0006238,7.98e-11,47;UBERON:0002616,2.93e-10,46;UBERON:0002020,5.12e-10,34;UBERON:0004121,1.09e-09,95;UBERON:0000924,1.09e-09,95;UBERON:0006601,1.09e-09,95;UBERON:0003056,4.74e-09,49;UBERON:0003080,1.04e-08,40;UBERON:0001017,1.17e-08,73;UBERON:0001016,1.21e-08,75;UBERON:0002780,3.62e-08,39;UBERON:0001890,3.62e-08,39;UBERON:0006240,3.62e-08,39;UBERON:0000483,4.46e-08,174;UBERON:0003528,4.61e-08,29;UBERON:0002791,4.61e-08,29;UBERON:0001893,4.61e-08,29;UBERON:0000119,1.73e-07,176;UBERON:0002021,4.37e-07,10;UBERON:0000411,4.37e-07,10;UBERON:0001950,4.37e-07,10 | |||
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| ||
|short_description=p1@Adarb1 | |short_description=p1@Adarb1 | ||
}} | }} |
Latest revision as of 08:00, 26 September 2015
Short description: | p1@Adarb1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Adarb1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000020496, ENSMUST00000098374, ENSMUST00000105406, ENSMUST00000144547, ENSMUST00000150227, ENSMUST00000154607, NM_001024837, NM_130895, NR_004429, NR_021486, uc007fvl.2, uc007fvm.2, uc007fvn.2, uc007fvo.2, uc007fvp.2, uc007fvq.2, uc007fvr.1, uc007fvs.1_5end |
EntrezGene: | Adarb1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
tube | 1.54e-22 | 114 |
anatomical conduit | 2.06e-22 | 122 |
structure with developmental contribution from neural crest | 1.91e-16 | 92 |
regional part of nervous system | 4.04e-14 | 54 |
neural tube | 8.13e-13 | 52 |
neural rod | 8.13e-13 | 52 |
future spinal cord | 8.13e-13 | 52 |
neural keel | 8.13e-13 | 52 |
neurectoderm | 1.09e-11 | 64 |
neural plate | 1.09e-11 | 64 |
presumptive neural plate | 1.09e-11 | 64 |
ecto-epithelium | 2.29e-11 | 73 |
brain | 7.98e-11 | 47 |
future brain | 7.98e-11 | 47 |
regional part of brain | 2.93e-10 | 46 |
gray matter | 5.12e-10 | 34 |
ectoderm-derived structure | 1.09e-09 | 95 |
ectoderm | 1.09e-09 | 95 |
presumptive ectoderm | 1.09e-09 | 95 |
pre-chordal neural plate | 4.74e-09 | 49 |
anterior neural tube | 1.04e-08 | 40 |
central nervous system | 1.17e-08 | 73 |
nervous system | 1.21e-08 | 75 |
regional part of forebrain | 3.62e-08 | 39 |
forebrain | 3.62e-08 | 39 |
future forebrain | 3.62e-08 | 39 |
epithelium | 4.46e-08 | 174 |
brain grey matter | 4.61e-08 | 29 |
regional part of telencephalon | 4.61e-08 | 29 |
telencephalon | 4.61e-08 | 29 |
cell layer | 1.73e-07 | 176 |
occipital lobe | 4.37e-07 | 10 |
visual cortex | 4.37e-07 | 10 |
neocortex | 4.37e-07 | 10 |