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FFCP PHASE1:Mm9::chr4:48058102..48058110,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=18124
|EntrezGene=18124
|HGNC=
|HGNC=
|MCL_coexpression_id=267
|TSSclassifier=NA
|UniProt=B1AVI1
|UniProt=B1AVI1
|association_with_transcript=0bp_to_ENSMUST00000154186,uc008suu.1_5end
|association_with_transcript=0bp_to_ENSMUST00000154186,uc008suu.1_5end
|cluster_id=chr4:48058102..48058110,+
|description=CAGE_peak_5_at_Nr4a3_5end
|description=CAGE_peak_5_at_Nr4a3_5end
|id=chr4:48058102..48058110,+
|id=chr4:48058102..48058110,+
|ontology_enrichment_celltype=CL:0000791!3.28e-08!9;CL:0000789!3.28e-08!9;CL:0002420!3.28e-08!9;CL:0002419!3.28e-08!9;CL:0000790!3.28e-08!9;CL:0000624!1.90e-07!8
|ontology_enrichment_celltype_v019_2=CL:0000791,6.53e-17,9;CL:0000789,6.53e-17,9;CL:0002420,6.53e-17,9;CL:0002419,6.53e-17,9;CL:0000790,6.53e-17,9;CL:0000624,3.72e-15,8;CL:0000838,9.03e-15,12;CL:0000542,1.98e-13,13;CL:0000051,1.98e-13,13;CL:0000084,2.07e-13,11;CL:0000827,2.07e-13,11;CL:0000893,9.12e-12,6;CL:0002489,9.12e-12,6;CL:0000898,9.12e-12,6;CL:0000809,9.12e-12,6;CL:0000810,9.12e-12,6;CL:0000895,9.12e-12,6;CL:0000808,9.12e-12,6;CL:0000894,9.12e-12,6;CL:0000806,9.12e-12,6;CL:0000807,9.12e-12,6;CL:0000805,9.12e-12,6;CL:0002425,9.12e-12,6;CL:0002436,9.12e-12,6;CL:0002427,9.12e-12,6;CL:0002428,9.12e-12,6;CL:0002429,9.12e-12,6;CL:0002433,9.12e-12,6;CL:0002431,9.12e-12,6;CL:0002432,9.12e-12,6;CL:0000738,2.31e-11,17;CL:0002087,2.31e-11,17;CL:0002031,7.71e-07,25
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002791!1.83e-10!29;UBERON:0003528!1.83e-10!29;UBERON:0001893!1.83e-10!29;UBERON:0000955!2.02e-10!50;UBERON:0006238!2.02e-10!50;UBERON:0000956!3.00e-10!21;UBERON:0001869!3.00e-10!21;UBERON:0000203!3.00e-10!21;UBERON:0002020!3.14e-10!34;UBERON:0003080!3.38e-10!40;UBERON:0001049!4.40e-10!52;UBERON:0005068!4.40e-10!52;UBERON:0006241!4.40e-10!52;UBERON:0007135!4.40e-10!52;UBERON:0002346!6.08e-10!71;UBERON:0003075!6.08e-10!71;UBERON:0007284!6.08e-10!71;UBERON:0002616!6.80e-10!49;UBERON:0002780!8.06e-10!39;UBERON:0001890!8.06e-10!39;UBERON:0006240!8.06e-10!39;UBERON:0004121!1.52e-09!102;UBERON:0000924!1.52e-09!102;UBERON:0006601!1.52e-09!102;UBERON:0000073!2.27e-09!75;UBERON:0001016!2.27e-09!75;UBERON:0001017!2.27e-09!73;UBERON:0005743!2.27e-09!73;UBERON:0000033!1.09e-08!63;UBERON:0000153!1.13e-08!94;UBERON:0007811!2.35e-08!86;UBERON:0002619!4.20e-08!17;UBERON:0002021!7.35e-08!10;UBERON:0000411!7.35e-08!10;UBERON:0001950!7.35e-08!10;UBERON:0003056!9.54e-08!49
|ontology_enrichment_uberon_v019_2=UBERON:0000956,1.81e-17,21;UBERON:0001869,1.81e-17,21;UBERON:0000203,1.81e-17,21;UBERON:0003528,2.32e-16,29;UBERON:0002791,2.32e-16,29;UBERON:0001893,2.32e-16,29;UBERON:0002021,4.18e-16,10;UBERON:0000411,4.18e-16,10;UBERON:0001950,4.18e-16,10;UBERON:0002780,1.39e-13,39;UBERON:0001890,1.39e-13,39;UBERON:0006240,1.39e-13,39;UBERON:0002020,3.42e-13,34;UBERON:0003080,4.21e-13,40;UBERON:0000955,5.29e-13,47;UBERON:0006238,5.29e-13,47;UBERON:0002619,9.64e-13,17;UBERON:0002616,5.20e-12,46;UBERON:0000073,2.22e-10,54;UBERON:0001049,5.83e-10,52;UBERON:0005068,5.83e-10,52;UBERON:0006241,5.83e-10,52;UBERON:0007135,5.83e-10,52;UBERON:0003056,1.10e-09,49;UBERON:0001017,2.35e-09,73;UBERON:0001016,6.31e-09,75;UBERON:0010314,2.65e-08,92;UBERON:0002346,4.58e-07,64;UBERON:0003075,4.58e-07,64;UBERON:0007284,4.58e-07,64;UBERON:0010371,6.00e-07,73
|phase1_expression=1.28119077683835,0.348975407639361,0,0,1.00179145989269,0.33575854382378,0,5.55230290798778,19.7104211012333,25.2789688427753,6.33506482434368,5.58405112967355,5.13602189793617,6.90621179110079,0,0,0,0.157731082679119,0.137114433605739,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,1.36609096991689,0,0.125896817975577,0.101376931219515,1.28482726513177,0,0.218025156380447,0.219686182734472,0.388859798148567,0.139986421625363,0,3.18786951509699,19.5847778343063,15.7964085596958,0.514518872071894,0,0,0.404632921719196,0,1.26766280701236,0,0,0,0,0,0,1.15265491596466,1.55534418462716,2.16009501330705,1.47227472945967,0.285650984403804,0.441737081903227,0.979926393719632,0.191690942036473,0,0,1.27687338085188,0.921639199537461,0.131886287730194,0.914876436024097,1.56274011167028,0,0,0.763991238884051,0,0.284743361598206,0.372798891650601,0.151452386666368,0.226714680320357,0.579728977403356,0,0,0,0,0,0,0,0,0,1.69012103732017,0,0,0,0,0,0,0,1.8125651855302,4.45326417194474,0.346970653532272,1.21786191324856,0.691846491768175,1.05505848386836,2.23418543557839,2.26199864393416,0,2.4581890676385,0,0.323533699894818,0,0,0,4.09893115816166,0.41889341362691,0,1.43778149407104,0.599902730993408,0.381210681219194,0.898743836428936,2.28750301409313,1.00523481690292,3.82413504423008,3.3243009452943,0.62336413367868,1.62241263067758,0.407357455401265,0,0,0.210441855886474,0,0,0,0.150704817835715,0.136072998302656,0,0.0937017245597288,0.258703370739016,0.215567992932842,0.378212160335639,0.175951124163949,0,0,0.348252166522167,0.411564272815887,0,0,0.257347907114715,0.284163499395593,0.414251545071004,0.234526059981096,0,0.23674473558521,0.393528463494808,0,0.232533944750408,0.268273401399619,0.583826711835847,1.6455984991348,0.985004784474571,0.405344047729279,0.730999937126662,0.658650345873152,0.268412837520744,4.83666881697493,7.20332286654991,0,0,0,0,0,0.201683524623343,0,0,0,0.164698954724011,0.502670417600539,0,0,0,0.216138049874694,0,0.189667900953082,0,0,0,0,0.140271639780637,0.0632365371242573,0.442830443938806,0,0.616985819609003,0,0,0,0,0,0,0,0,0,0,0,0,0,0.505157755894224,0,0,0.369506380333209,0,0.162964976442026,0,0,0,0,0.195133647857799,0.472905432318573,0.664394068946325,0,0.491589944147214,0.518054945597687,0.578596234326046,0,0,0,0,0,0.117211686592203,0,0,0.315508219416257,0,0,0,0.668396022247182,0,0,0.292255857911312,0.395287777946524,3.53453448063988,0.283880170416537,0,0,0,0,0.242780636154981,0,0,0,0.307435147943927,0,0,0,0,0,0,1.70219802876894,0,0.129358683782755,0,0.177340233642274,0.356737635204141,0,0.608929898229199,0.23467170806371,0.63549621259146,0.220528398054962,0.98931751764888,0.161464426695906,0.180938774784468,0,0.328281799490123,0,0.741701208042039,0,0,0,0,0.27338845544205,0,5.60928818979723,4.89830083132803,5.11339903076368,0,0,0,0,0.209088296014469,0,0.404593039154462,0.495920734352016,0.785267825952089,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0.316011120628178,0,0,0,0,0,0.120195449519969,0.147689527174577,0,0,0.201652370273681,0.38983152295901,0.192423683280659,0.350630706544707,0.226730383615211,0,0,0,1.15913756419314,0,0.183151624267265,0,2.50786052017682,3.95326289831947,3.22227665555024,5.15605962095457,4.98374228796694,4.11049511862385,3.0215755895588,2.70009000092722,2.2516060161211,6.79713613476307,4.14208249401456,0.31136204275253,0.399024873401031,0,0.243106717068294,0,0,1.11123363900808,0,0.320919209591815,0.252697211763798,0,0.188626341386076,0.187283014939765,0.256100609619477,0.114870937911227,0.476293691283074,0.231768651889711,0.578727661391115,0,0.147198920134397,0.685738504770831,0.177475806159338,0.238436189947321,0.436039249896986,0.0941093804153306,0.169229215783353,0.182927972872773,0,0.407412341537585,0,0.237270036248348,0.29551344712669,0.409231043169689,0.309873682371932,0.385813221962283,0.249810577937946,0,0.859484216193193,0.956441660344217,0.441182838239031,0
|phase1_expression=1.28119077683835,0.348975407639361,0,0,1.00179145989269,0.33575854382378,0,5.55230290798778,19.7104211012333,25.2789688427753,6.33506482434368,5.58405112967355,5.13602189793617,6.90621179110079,0,0,0,0.157731082679119,0.137114433605739,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,1.36609096991689,0,0.125896817975577,0.101376931219515,1.28482726513177,0,0.218025156380447,0.219686182734472,0.388859798148567,0.139986421625363,0,3.18786951509699,19.5847778343063,15.7964085596958,0.514518872071894,0,0,0.404632921719196,0,1.26766280701236,0,0,0,0,0,0,1.15265491596466,1.55534418462716,2.16009501330705,1.47227472945967,0.285650984403804,0.441737081903227,0.979926393719632,0.191690942036473,0,0,1.27687338085188,0.921639199537461,0.131886287730194,0.914876436024097,1.56274011167028,0,0,0.763991238884051,0,0.284743361598206,0.372798891650601,0.151452386666368,0.226714680320357,0.579728977403356,0,0,0,0,0,0,0,0,0,1.69012103732017,0,0,0,0,0,0,0,1.8125651855302,4.45326417194474,0.346970653532272,1.21786191324856,0.691846491768175,1.05505848386836,2.23418543557839,2.26199864393416,0,2.4581890676385,0,0.323533699894818,0,0,0,4.09893115816166,0.41889341362691,0,1.43778149407104,0.599902730993408,0.381210681219194,0.898743836428936,2.28750301409313,1.00523481690292,3.82413504423008,3.3243009452943,0.62336413367868,1.62241263067758,0.407357455401265,0,0,0.210441855886474,0,0,0,0.150704817835715,0.136072998302656,0,0.0937017245597288,0.258703370739016,0.215567992932842,0.378212160335639,0.175951124163949,0,0,0.348252166522167,0.411564272815887,0,0,0.257347907114715,0.284163499395593,0.414251545071004,0.234526059981096,0,0.23674473558521,0.393528463494808,0,0.232533944750408,0.268273401399619,0.583826711835847,1.6455984991348,0.985004784474571,0.405344047729279,0.730999937126662,0.658650345873152,0.268412837520744,4.83666881697493,7.20332286654991,0,0,0,0,0,0.201683524623343,0,0,0,0.164698954724011,0.502670417600539,0,0,0,0.216138049874694,0,0.189667900953082,0,0,0,0,0.140271639780637,0.0632365371242573,0.442830443938806,0,0.616985819609003,0,0,0,0,0,0,0,0,0,0,0,0,0,0.505157755894224,0,0,0.369506380333209,0,0.162964976442026,0,0,0,0,0.195133647857799,0.472905432318573,0.664394068946325,0,0.491589944147214,0.518054945597687,0.578596234326046,0,0,0,0,0,0.117211686592203,0,0,0.315508219416257,0,0,0,0.668396022247182,0,0,0.292255857911312,0.395287777946524,3.53453448063988,0.283880170416537,0,0,0,0,0.242780636154981,0,0,0,0.307435147943927,0,0,0,0,0,0,1.70219802876894,0,0.129358683782755,0,0.177340233642274,0.356737635204141,0,0.608929898229199,0.23467170806371,0.63549621259146,0.220528398054962,0.98931751764888,0.161464426695906,0.180938774784468,0,0.328281799490123,0,0.741701208042039,0,0,0,0,0.27338845544205,0,5.60928818979723,4.89830083132803,5.11339903076368,0,0,0,0,0.209088296014469,0,0.404593039154462,0.495920734352016,0.785267825952089,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0.316011120628178,0,0,0,0,0,0.120195449519969,0.147689527174577,0,0,0.201652370273681,0.38983152295901,0.192423683280659,0.350630706544707,0.226730383615211,0,0,0,1.15913756419314,0,0.183151624267265,0,2.50786052017682,3.95326289831947,3.22227665555024,5.15605962095457,4.98374228796694,4.11049511862385,3.0215755895588,2.70009000092722,2.2516060161211,6.79713613476307,4.14208249401456,0.31136204275253,0.399024873401031,0,0.243106717068294,0,0,1.11123363900808,0,0.320919209591815,0.252697211763798,0,0.188626341386076,0.187283014939765,0.256100609619477,0.114870937911227,0.476293691283074,0.231768651889711,0.578727661391115,0,0.147198920134397,0.685738504770831,0.177475806159338,0.238436189947321,0.436039249896986,0.0941093804153306,0.169229215783353,0.182927972872773,0,0.407412341537585,0,0.237270036248348,0.29551344712669,0.409231043169689,0.309873682371932,0.385813221962283,0.249810577937946,0,0.859484216193193,0.956441660344217,0.441182838239031,0
|short_description=p5@Nr4a3
|short_description=p5@Nr4a3
}}
}}

Latest revision as of 01:41, 27 September 2015

Short description:p5@Nr4a3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Nr4a3_5end
Coexpression cluster:MCL_coexpression_mm9:267
Association with transcript: 0bp_to_ENSMUST00000154186, uc008suu.1_5end
EntrezGene:Nr4a3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p5@Nr4a3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.28
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E95.55
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E719.71
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F225.28
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E66.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F15.58
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E45.14
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E86.91
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.26
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H21.37
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.28
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A23.19
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I919.58
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A115.80
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.40
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.56
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.16
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.47
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.98
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.19
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.28
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.92
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.91
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.76
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.37
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.69
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H91.81
adrenal gland, adult.CNhs10508.49-24D74.45
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D61.22
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F51.06
adrenal gland, neonate N00.CNhs11191.1311-23C12.23
adrenal gland, neonate N25.CNhs11223.1377-27I32.26
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H12.46
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B24.10
cerebellum, neonate N30.CNhs11135.1395-42I20.42
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.44
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.38
corpora quadrigemina, adult.CNhs10501.16-22A40.90
corpus striatum, adult.CNhs10487.19-21D82.29
corpus striatum, neonate N00.CNhs11226.630-43F11.01
cortex, adult.CNhs10473.12-14D53.82
cortex, neonate N30.CNhs11107.1392-42F23.32
diencephalon, adult.CNhs10482.20-12F20.62
diencephalon, neonate N30.CNhs11201.1388-42B21.62
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.41
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.14
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.09
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.58
heart, neonate N03.CNhs11221.1349-25I21.65
heart, neonate N10.CNhs11118.749-24G10.99
heart, neonate N16.CNhs11209.782-15G10.41
heart, neonate N20.CNhs11127.821-26I60.73
heart, neonate N25.CNhs11196.1351-25D30.66
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E84.84
hippocampus, neonate N00.CNhs11228.627-43G17.20
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.44
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.62
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.51
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.47
lung, neonate N07.CNhs11111.715-19A30.66
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.49
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H20.58
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.12
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I93.53
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.70
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.64
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.99
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.18
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.74
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C65.61
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C94.90
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D35.11
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.50
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.39
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.35
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E41.16
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F82.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.95
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A23.22
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A35.16
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D74.98
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.11
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.02
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.25
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A86.80
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A94.14
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.11
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.30
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.96
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
mature alpha-beta T cell6.53e-179
alpha-beta T cell6.53e-179
immature T cell6.53e-179
mature T cell6.53e-179
immature alpha-beta T cell6.53e-179
CD4-positive, alpha-beta T cell3.72e-158
lymphoid lineage restricted progenitor cell9.03e-1512
lymphocyte1.98e-1313
common lymphoid progenitor1.98e-1313
T cell2.07e-1311
pro-T cell2.07e-1311
thymocyte9.12e-126
double negative thymocyte9.12e-126
naive T cell9.12e-126
double-positive, alpha-beta thymocyte9.12e-126
CD4-positive, alpha-beta thymocyte9.12e-126
naive thymus-derived CD4-positive, alpha-beta T cell9.12e-126
DN4 thymocyte9.12e-126
DN1 thymic pro-T cell9.12e-126
DN2 thymocyte9.12e-126
DN3 thymocyte9.12e-126
immature single positive thymocyte9.12e-126
early T lineage precursor9.12e-126
mature CD4 single-positive thymocyte9.12e-126
resting double-positive thymocyte9.12e-126
double-positive blast9.12e-126
CD69-positive double-positive thymocyte9.12e-126
CD69-positive, CD4-positive single-positive thymocyte9.12e-126
CD4-positive, CD8-intermediate double-positive thymocyte9.12e-126
CD24-positive, CD4 single-positive thymocyte9.12e-126
leukocyte2.31e-1117
nongranular leukocyte2.31e-1117
hematopoietic lineage restricted progenitor cell7.71e-0725

Uber anatomy
Ontology termp-valuen
cerebral cortex1.81e-1721
cerebral hemisphere1.81e-1721
pallium1.81e-1721
brain grey matter2.32e-1629
regional part of telencephalon2.32e-1629
telencephalon2.32e-1629
occipital lobe4.18e-1610
visual cortex4.18e-1610
neocortex4.18e-1610
regional part of forebrain1.39e-1339
forebrain1.39e-1339
future forebrain1.39e-1339
gray matter3.42e-1334
anterior neural tube4.21e-1340
brain5.29e-1347
future brain5.29e-1347
regional part of cerebral cortex9.64e-1317
regional part of brain5.20e-1246
regional part of nervous system2.22e-1054
neural tube5.83e-1052
neural rod5.83e-1052
future spinal cord5.83e-1052
neural keel5.83e-1052
pre-chordal neural plate1.10e-0949
central nervous system2.35e-0973
nervous system6.31e-0975
structure with developmental contribution from neural crest2.65e-0892
neurectoderm4.58e-0764
neural plate4.58e-0764
presumptive neural plate4.58e-0764
ecto-epithelium6.00e-0773
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