FFCP PHASE1:Mm9::chr3:55849731..55849735,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2125 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:55849731..55849735,- | |||
|description=CAGE_peak_at_chr3:55849731..55849735,- | |description=CAGE_peak_at_chr3:55849731..55849735,- | ||
|id=chr3:55849731..55849735,- | |id=chr3:55849731..55849735,- | ||
|ontology_enrichment_celltype=CL:0000540!1.29e-26!33;CL:0000047!1.29e-26!33;CL:0000031!1.29e-26!33;CL:0000404!1.29e-26!33;CL:0000221!7.91e-23!44;CL:0000133!7.91e-23!44;CL:0000393!9.63e-23!39;CL:0000211!9.63e-23!39;CL:0002319!2.05e-22!43;CL:0000055!4.15e-19!50;CL:0000117!2.68e-18!23;CL:0000337!2.68e-18!23;CL:0002321!9.16e-10!70;CL:0000220!9.16e-10!70;CL:0000107!1.11e-08!9 | |ontology_enrichment_celltype=CL:0000540!1.29e-26!33;CL:0000047!1.29e-26!33;CL:0000031!1.29e-26!33;CL:0000404!1.29e-26!33;CL:0000221!7.91e-23!44;CL:0000133!7.91e-23!44;CL:0000393!9.63e-23!39;CL:0000211!9.63e-23!39;CL:0002319!2.05e-22!43;CL:0000055!4.15e-19!50;CL:0000117!2.68e-18!23;CL:0000337!2.68e-18!23;CL:0002321!9.16e-10!70;CL:0000220!9.16e-10!70;CL:0000107!1.11e-08!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.38e-50,33;CL:0000047,1.38e-50,33;CL:0000031,1.38e-50,33;CL:0000404,1.38e-50,33;CL:0000393,6.42e-46,39;CL:0000211,6.42e-46,39;CL:0002319,7.21e-38,43;CL:0000221,6.49e-37,44;CL:0000133,6.49e-37,44;CL:0000117,1.87e-34,23;CL:0000337,1.87e-34,23;CL:0002321,1.05e-23,70;CL:0000107,3.69e-18,9;CL:0000723,3.12e-17,91;CL:0000048,3.12e-17,91;CL:0000034,6.80e-16,97;CL:0002612,5.09e-11,3;CL:0002610,8.72e-11,3;CL:0000120,4.22e-10,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!5.02e-27!102;UBERON:0000924!5.02e-27!102;UBERON:0006601!5.02e-27!102;UBERON:0000073!8.61e-25!75;UBERON:0001016!8.61e-25!75;UBERON:0001017!4.13e-24!73;UBERON:0005743!4.13e-24!73;UBERON:0002346!1.46e-17!71;UBERON:0003075!1.46e-17!71;UBERON:0007284!1.46e-17!71;UBERON:0002020!1.48e-16!34;UBERON:0000033!6.11e-15!63;UBERON:0001049!5.39e-13!52;UBERON:0005068!5.39e-13!52;UBERON:0006241!5.39e-13!52;UBERON:0007135!5.39e-13!52;UBERON:0000955!6.20e-13!50;UBERON:0006238!6.20e-13!50;UBERON:0002791!7.18e-13!29;UBERON:0003528!7.18e-13!29;UBERON:0001893!7.18e-13!29;UBERON:0002616!2.29e-12!49;UBERON:0003056!3.19e-11!49;UBERON:0003080!3.06e-09!40;UBERON:0000010!6.57e-09!11;UBERON:0002780!8.83e-09!39;UBERON:0001890!8.83e-09!39;UBERON:0006240!8.83e-09!39;UBERON:0002410!1.11e-08!9;UBERON:0000956!5.70e-08!21;UBERON:0001869!5.70e-08!21;UBERON:0000203!5.70e-08!21;UBERON:0007811!3.83e-07!86;UBERON:0002619!9.78e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.78e-27,73;UBERON:0001016,3.29e-26,75;UBERON:0004121,9.25e-20,95;UBERON:0000924,9.25e-20,95;UBERON:0006601,9.25e-20,95;UBERON:0002410,3.69e-18,9;UBERON:0000010,1.08e-14,11;UBERON:0002020,2.98e-14,34;UBERON:0000073,7.73e-13,54;UBERON:0010313,4.04e-11,3;UBERON:0002342,4.04e-11,3;UBERON:0002005,4.04e-11,3;UBERON:0005428,4.04e-11,3;UBERON:0005062,4.04e-11,3;UBERON:0002257,5.09e-11,3;UBERON:0001948,5.89e-11,5;UBERON:0002315,5.89e-11,5;UBERON:0004684,8.72e-11,3;UBERON:0002275,8.72e-11,3;UBERON:0002346,2.07e-10,64;UBERON:0003075,2.07e-10,64;UBERON:0007284,2.07e-10,64;UBERON:0002240,3.82e-09,6;UBERON:0005174,3.82e-09,6;UBERON:0001137,3.82e-09,6;UBERON:0010371,9.83e-09,73;UBERON:0001049,1.89e-08,52;UBERON:0005068,1.89e-08,52;UBERON:0006241,1.89e-08,52;UBERON:0007135,1.89e-08,52;UBERON:0003528,5.51e-08,29;UBERON:0002791,5.51e-08,29;UBERON:0001893,5.51e-08,29;UBERON:0011216,2.64e-07,194;UBERON:0010314,3.20e-07,92;UBERON:0002420,5.34e-07,8;UBERON:0007245,5.34e-07,8;UBERON:0010009,5.34e-07,8;UBERON:0010011,5.34e-07,8;UBERON:0000454,5.34e-07,8 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0.218025156380447,0,0.194429899074283,0,0,0,0,0,1.02903774414379,0,0,1.41621522601718,1.5869729378161,1.26766280701236,0,0,0,0,0,0.299600110518405,0,2.28117147078651,0.405017814995072,2.10324961351382,1.14260393761521,0.441737081903227,1.95985278743926,0.479227355091182,0.919218786610021,5.50579404996943,1.27687338085188,1.84327839907492,0.395658863190582,0.457438218012048,1.56274011167028,0.558365998002762,5.06486349028512,3.97275444219706,5.00868595305235,5.97961059356232,1.1183966749518,0.151452386666368,0.302286240427142,0,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0.230615497256059,0.301445281105245,0.117588707135705,0.125666591329675,0,0,0,0,0,0.969750506270444,0,0.292780797011547,0.209446706813455,0,0,0,0,0.449371918214468,1.37250180845588,0.251308704225729,0,0.511430914660661,0,0,0.101839363850316,0.124406970610093,0.758168275301024,0.210441855886474,0.390361328888111,0.229902104433473,0,0.150704817835715,0.204109497453984,0.2562274405697,0.281105173679186,0.258703370739016,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0.393528463494808,0,0.465067889500816,0,0.116765342367169,0.16455984991348,0.32833492815819,0,0.146199987425332,0,0,0.420579897128254,0.102904612379284,0,0,0.213288250535234,0,0,0.201683524623343,0,0,0,0,0,0,0.19496408711912,0,0,0,0,0.342745537829186,0,0,0.193952487167626,0.140271639780637,0.0632365371242573,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0.234690248288502,0,0,0,0,0,0.159454768657487,0.327726629431476,0.172684981865896,0,0,0,0,0,0.321101179975584,0.234423373184406,0,0.252470927204373,5.67914794949262,3.12350995437311,1.50796378412959,0.955875191810208,1.78238939265915,1.69845918473299,4.04810701674894,2.92255857911312,0.790575555893047,0.642642632843614,0,0,0.162886959353576,0,0,0.242780636154981,0,0.188605079755898,0,0.307435147943927,0,0.363533729477506,0.712994756769443,0,0,0,0.340439605753788,0,0,0,0,0,0.329098041204242,0,0,0,0,0.16488625294148,0.161464426695906,0.0603129249281559,0.358117032009409,0.492422699235184,0,0,0,0,0,0.188368457004691,0,0,0,0,0,0,0,0,0,0.209088296014469,0.218362563746178,0.404593039154462,0,0,0,0,0,0,0.165458490457098,0,0.258319646955462,0,0,0.13020438484395,0,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0.15241361331,0,0,0,0,0,0,0.0897138566094757,0,0,0,0.183151624267265,0,0.501572104035363,0.564751842617067,0.920650473014354,0,0.68741272937475,0.685082519770642,0,1.35004500046361,0.900642406448441,0.906284817968409,1.55328093525546,0,0,0.170733605754134,0,0,0,0.222246727801615,0,0.64183841918363,0,0.25347929989024,0.188626341386076,0.0936415074698824,0.128050304809739,0.114870937911227,0,0.115884325944855,0,0,0.441596760403192,0,0.354951612318675,0.476872379894642,0.145346416632329,0.470546902076653,0.0846146078916765,0.548783918618318,0.263069711437843,0.135804113845862,0,0.237270036248348,0.0985044823755635,0,0.309873682371932,0.192906610981141,0,0,0,0,0,0 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|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0.218025156380447,0,0.194429899074283,0,0,0,0,0,1.02903774414379,0,0,1.41621522601718,1.5869729378161,1.26766280701236,0,0,0,0,0,0.299600110518405,0,2.28117147078651,0.405017814995072,2.10324961351382,1.14260393761521,0.441737081903227,1.95985278743926,0.479227355091182,0.919218786610021,5.50579404996943,1.27687338085188,1.84327839907492,0.395658863190582,0.457438218012048,1.56274011167028,0.558365998002762,5.06486349028512,3.97275444219706,5.00868595305235,5.97961059356232,1.1183966749518,0.151452386666368,0.302286240427142,0,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0.230615497256059,0.301445281105245,0.117588707135705,0.125666591329675,0,0,0,0,0,0.969750506270444,0,0.292780797011547,0.209446706813455,0,0,0,0,0.449371918214468,1.37250180845588,0.251308704225729,0,0.511430914660661,0,0,0.101839363850316,0.124406970610093,0.758168275301024,0.210441855886474,0.390361328888111,0.229902104433473,0,0.150704817835715,0.204109497453984,0.2562274405697,0.281105173679186,0.258703370739016,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0.393528463494808,0,0.465067889500816,0,0.116765342367169,0.16455984991348,0.32833492815819,0,0.146199987425332,0,0,0.420579897128254,0.102904612379284,0,0,0.213288250535234,0,0,0.201683524623343,0,0,0,0,0,0,0.19496408711912,0,0,0,0,0.342745537829186,0,0,0.193952487167626,0.140271639780637,0.0632365371242573,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0.234690248288502,0,0,0,0,0,0.159454768657487,0.327726629431476,0.172684981865896,0,0,0,0,0,0.321101179975584,0.234423373184406,0,0.252470927204373,5.67914794949262,3.12350995437311,1.50796378412959,0.955875191810208,1.78238939265915,1.69845918473299,4.04810701674894,2.92255857911312,0.790575555893047,0.642642632843614,0,0,0.162886959353576,0,0,0.242780636154981,0,0.188605079755898,0,0.307435147943927,0,0.363533729477506,0.712994756769443,0,0,0,0.340439605753788,0,0,0,0,0,0.329098041204242,0,0,0,0,0.16488625294148,0.161464426695906,0.0603129249281559,0.358117032009409,0.492422699235184,0,0,0,0,0,0.188368457004691,0,0,0,0,0,0,0,0,0,0.209088296014469,0.218362563746178,0.404593039154462,0,0,0,0,0,0,0.165458490457098,0,0.258319646955462,0,0,0.13020438484395,0,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0.15241361331,0,0,0,0,0,0,0.0897138566094757,0,0,0,0.183151624267265,0,0.501572104035363,0.564751842617067,0.920650473014354,0,0.68741272937475,0.685082519770642,0,1.35004500046361,0.900642406448441,0.906284817968409,1.55328093525546,0,0,0.170733605754134,0,0,0,0.222246727801615,0,0.64183841918363,0,0.25347929989024,0.188626341386076,0.0936415074698824,0.128050304809739,0.114870937911227,0,0.115884325944855,0,0,0.441596760403192,0,0.354951612318675,0.476872379894642,0.145346416632329,0.470546902076653,0.0846146078916765,0.548783918618318,0.263069711437843,0.135804113845862,0,0.237270036248348,0.0985044823755635,0,0.309873682371932,0.192906610981141,0,0,0,0,0,0 | ||
|short_description=p@chr3:55849731..55849735,- | |short_description=p@chr3:55849731..55849735,- | ||
}} | }} |
Latest revision as of 21:19, 3 August 2015
Short description: | p@chr3:55849731..55849735, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:55849731..55849735, - |
Coexpression cluster: | MCL_coexpression_mm9:2125 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.38e-50 | 33 |
neuronal stem cell | 1.38e-50 | 33 |
neuroblast | 1.38e-50 | 33 |
electrically signaling cell | 1.38e-50 | 33 |
electrically responsive cell | 6.42e-46 | 39 |
electrically active cell | 6.42e-46 | 39 |
neural cell | 7.21e-38 | 43 |
ectodermal cell | 6.49e-37 | 44 |
neurectodermal cell | 6.49e-37 | 44 |
CNS neuron (sensu Vertebrata) | 1.87e-34 | 23 |
neuroblast (sensu Vertebrata) | 1.87e-34 | 23 |
embryonic cell | 1.05e-23 | 70 |
autonomic neuron | 3.69e-18 | 9 |
somatic stem cell | 3.12e-17 | 91 |
multi fate stem cell | 3.12e-17 | 91 |
stem cell | 6.80e-16 | 97 |
neuron of the ventral spinal cord | 5.09e-11 | 3 |
raphe nuclei neuron | 8.72e-11 | 3 |
granule cell | 4.22e-10 | 3 |