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FFCP PHASE1:Mm9::chr3:80606667..80606692,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=14800
|EntrezGene=14800
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=G5E8H1,E9QKC0,P23819,Q4LG64,Q80VM6
|UniProt=G5E8H1,E9QKC0,P23819,Q4LG64,Q80VM6
|association_with_transcript=20bp_to_ENSMUST00000075316,ENSMUST00000107745,ENSMUST00000107746,NM_001039195,NM_001083806,NM_013540,uc008poa.1,uc008pob.1,uc008poc.1,uc008pod.1,uc008poe.1_5end
|association_with_transcript=20bp_to_ENSMUST00000075316,ENSMUST00000107745,ENSMUST00000107746,NM_001039195,NM_001083806,NM_013540,uc008poa.1,uc008pob.1,uc008poc.1,uc008pod.1,uc008poe.1_5end
|cluster_id=chr3:80606667..80606692,-
|description=CAGE_peak_5_at_Gria2_5end
|description=CAGE_peak_5_at_Gria2_5end
|id=chr3:80606667..80606692,-
|id=chr3:80606667..80606692,-
|ontology_enrichment_celltype=CL:0000540!2.16e-15!33;CL:0000047!2.16e-15!33;CL:0000031!2.16e-15!33;CL:0000404!2.16e-15!33;CL:0000117!1.64e-13!23;CL:0000337!1.64e-13!23;CL:0000221!6.78e-11!44;CL:0000133!6.78e-11!44;CL:0000393!6.88e-11!39;CL:0000211!6.88e-11!39;CL:0002319!9.63e-11!43;CL:0000055!2.04e-07!50
|ontology_enrichment_celltype=CL:0000540!2.16e-15!33;CL:0000047!2.16e-15!33;CL:0000031!2.16e-15!33;CL:0000404!2.16e-15!33;CL:0000117!1.64e-13!23;CL:0000337!1.64e-13!23;CL:0000221!6.78e-11!44;CL:0000133!6.78e-11!44;CL:0000393!6.88e-11!39;CL:0000211!6.88e-11!39;CL:0002319!9.63e-11!43;CL:0000055!2.04e-07!50
|ontology_enrichment_celltype_v019_2=CL:0000117,6.03e-18,23;CL:0000337,6.03e-18,23;CL:0000540,1.38e-15,33;CL:0000047,1.38e-15,33;CL:0000031,1.38e-15,33;CL:0000404,1.38e-15,33;CL:0000393,8.33e-12,39;CL:0000211,8.33e-12,39;CL:0002319,6.51e-10,43;CL:0000221,1.69e-09,44;CL:0000133,1.69e-09,44
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!1.89e-29!73;UBERON:0005743!1.89e-29!73;UBERON:0000073!1.73e-28!75;UBERON:0001016!1.73e-28!75;UBERON:0002346!4.18e-27!71;UBERON:0003075!4.18e-27!71;UBERON:0007284!4.18e-27!71;UBERON:0001049!3.75e-25!52;UBERON:0005068!3.75e-25!52;UBERON:0006241!3.75e-25!52;UBERON:0007135!3.75e-25!52;UBERON:0004121!5.61e-25!102;UBERON:0000924!5.61e-25!102;UBERON:0006601!5.61e-25!102;UBERON:0000955!4.39e-24!50;UBERON:0006238!4.39e-24!50;UBERON:0000033!2.70e-23!63;UBERON:0002616!3.15e-23!49;UBERON:0002020!5.29e-21!34;UBERON:0003056!1.00e-19!49;UBERON:0003080!2.95e-19!40;UBERON:0002780!1.55e-18!39;UBERON:0001890!1.55e-18!39;UBERON:0006240!1.55e-18!39;UBERON:0002791!9.55e-18!29;UBERON:0003528!9.55e-18!29;UBERON:0001893!9.55e-18!29;UBERON:0000956!8.22e-13!21;UBERON:0001869!8.22e-13!21;UBERON:0000203!8.22e-13!21;UBERON:0007811!1.64e-12!86;UBERON:0000153!1.37e-11!94;UBERON:0002619!2.11e-10!17;UBERON:0002021!4.41e-09!10;UBERON:0000411!4.41e-09!10;UBERON:0001950!4.41e-09!10
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.71e-33,54;UBERON:0001017,1.19e-32,73;UBERON:0001049,1.90e-31,52;UBERON:0005068,1.90e-31,52;UBERON:0006241,1.90e-31,52;UBERON:0007135,1.90e-31,52;UBERON:0001016,3.00e-31,75;UBERON:0002346,4.17e-31,64;UBERON:0003075,4.17e-31,64;UBERON:0007284,4.17e-31,64;UBERON:0002020,1.11e-27,34;UBERON:0000955,4.03e-27,47;UBERON:0006238,4.03e-27,47;UBERON:0004121,1.17e-26,95;UBERON:0000924,1.17e-26,95;UBERON:0006601,1.17e-26,95;UBERON:0002616,5.34e-26,46;UBERON:0010371,4.91e-25,73;UBERON:0003056,1.38e-24,49;UBERON:0003080,5.95e-24,40;UBERON:0003528,3.23e-23,29;UBERON:0002791,3.23e-23,29;UBERON:0001893,3.23e-23,29;UBERON:0002780,5.57e-23,39;UBERON:0001890,5.57e-23,39;UBERON:0006240,5.57e-23,39;UBERON:0010314,9.35e-18,92;UBERON:0000956,1.86e-16,21;UBERON:0001869,1.86e-16,21;UBERON:0000203,1.86e-16,21;UBERON:0002619,3.66e-13,17;UBERON:0002021,7.11e-12,10;UBERON:0000411,7.11e-12,10;UBERON:0001950,7.11e-12,10;UBERON:0002420,6.98e-08,8;UBERON:0007245,6.98e-08,8;UBERON:0010009,6.98e-08,8;UBERON:0010011,6.98e-08,8;UBERON:0000454,6.98e-08,8;UBERON:0003076,8.36e-08,12;UBERON:0003057,8.36e-08,12;UBERON:0000025,7.54e-07,114
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.52781385981954,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0.194429899074283,0.139986421625363,0,0,0,0,0,0,0,4.24864567805155,1.5869729378161,1.26766280701236,0,0,0,0.988866362566974,0,0,0,7.05089363697648,3.78016627328734,4.20649922702764,4.28476476605705,4.63823935998388,3.79721477566358,3.45043695665651,2.75765635983006,7.70811166995721,11.6195477657521,11.5204899942183,3.16527090552465,4.02545631850602,6.25096044668112,5.02529398202486,9.56696437053856,11.1542720877071,14.142172102736,13.3829379951157,8.57437450796383,0,0.0755715601067855,0,0,0,0,0,0,0.421333260395256,0,0,0,0.422530259330042,0,0,0,0,0,0,0.79928715803342,0,0.742210695324124,1.21439728736295,0,0.691846491768175,1.05505848386836,0.940709657085638,0.502666365318702,0,0,0,0,0.220841518460394,0,0,14.0534782565543,27.2280718857492,0,0,0,0,14.0803201040533,18.3000241127451,18.7224984648168,38.9366477230699,46.0287823194595,11.0127663616567,28.5544622999253,0,0,2.0217820674694,1.05220927943237,0,0,0.180062129805349,1.20563854268572,2.38127747029647,2.69038812598185,2.90475346135159,4.65666067330228,0,0.189106080167819,0.351902248327898,0.43839146485515,0.834141747676794,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,49.628427861134,19.3460671273055,0,0,0,0.232236671860439,0.38660238396628,0.201683524623343,0.22237804384487,0,0,0.164698954724011,0.251335208800269,0.198956472041151,0,0,0.216138049874694,0.199141273254367,0,0.114248512609729,0,0,0,0.280543279561274,0,0.147610147979602,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0.221464689648775,0,0,0,0,0,0,0,0,7.22477654945064,9.25972324078405,0,0,0.631016438832513,0.780877488593277,1.50796378412959,0.238968797952552,1.11399337041197,0.849229592366497,1.21443210502468,2.63030272120181,5.13874111330481,30.2042037436499,0,0,0.488660878060728,0,0,0.242780636154981,0,0,0,0.307435147943927,0.258428293168221,0.727067458955011,0.356497378384721,0.948110273807448,0,0,3.06395645178409,0.36012218806262,0,0,1.95074257006501,1.07021290561242,2.63278432963394,0.304464949114599,0,0,0,0,0,0.120625849856312,0,0,0,6.11903496634682,0,0.619160603889667,0,0,0.136694227721025,0,0.169978429993855,0.139951452323658,0.138199973804424,0,0.158167996790568,0.406638934253697,0.324016022465404,0,0.218362563746178,0.134864346384821,0,0.26175594198403,0.259229946583586,0,0,0.149516546043979,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0,0,0,0,0.15241361331,0,0.0974578807397524,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,26.5433366030021,22.0956113523445,20.0513429703789,19.247556422493,28.0883833105963,29.4603619981983,37.8012600129811,27.4695933966774,24.9228324941313,26.9235362110946,0.415149390336707,1.99512436700516,1.70733605754134,2.18796045361465,2.09613162627982,1.65459157605013,2.66696073361938,2.06035057238894,1.60459604795908,2.27427490587418,2.78827229879264,3.2066478035633,2.90288673156635,4.86591158277006,4.19278923375977,5.23923060411381,4.51948871184936,5.20854895252004,2.47251540481984,1.76638704161277,2.74295401908332,2.66213709239006,2.62279808942053,1.0174249164263,2.72917203204459,3.80765735512544,2.74391959309159,2.10455769150274,3.66671107383827,1.12228454331548,2.72860541685601,3.74317033027141,0.818462086339379,3.71848418846318,2.70069255373598,2.24829520144151,3.27504251823572,1.71896843238639,0.382576664137687,0.220591419119515,0.231867835620421
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.52781385981954,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0.194429899074283,0.139986421625363,0,0,0,0,0,0,0,4.24864567805155,1.5869729378161,1.26766280701236,0,0,0,0.988866362566974,0,0,0,7.05089363697648,3.78016627328734,4.20649922702764,4.28476476605705,4.63823935998388,3.79721477566358,3.45043695665651,2.75765635983006,7.70811166995721,11.6195477657521,11.5204899942183,3.16527090552465,4.02545631850602,6.25096044668112,5.02529398202486,9.56696437053856,11.1542720877071,14.142172102736,13.3829379951157,8.57437450796383,0,0.0755715601067855,0,0,0,0,0,0,0.421333260395256,0,0,0,0.422530259330042,0,0,0,0,0,0,0.79928715803342,0,0.742210695324124,1.21439728736295,0,0.691846491768175,1.05505848386836,0.940709657085638,0.502666365318702,0,0,0,0,0.220841518460394,0,0,14.0534782565543,27.2280718857492,0,0,0,0,14.0803201040533,18.3000241127451,18.7224984648168,38.9366477230699,46.0287823194595,11.0127663616567,28.5544622999253,0,0,2.0217820674694,1.05220927943237,0,0,0.180062129805349,1.20563854268572,2.38127747029647,2.69038812598185,2.90475346135159,4.65666067330228,0,0.189106080167819,0.351902248327898,0.43839146485515,0.834141747676794,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,49.628427861134,19.3460671273055,0,0,0,0.232236671860439,0.38660238396628,0.201683524623343,0.22237804384487,0,0,0.164698954724011,0.251335208800269,0.198956472041151,0,0,0.216138049874694,0.199141273254367,0,0.114248512609729,0,0,0,0.280543279561274,0,0.147610147979602,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0.221464689648775,0,0,0,0,0,0,0,0,7.22477654945064,9.25972324078405,0,0,0.631016438832513,0.780877488593277,1.50796378412959,0.238968797952552,1.11399337041197,0.849229592366497,1.21443210502468,2.63030272120181,5.13874111330481,30.2042037436499,0,0,0.488660878060728,0,0,0.242780636154981,0,0,0,0.307435147943927,0.258428293168221,0.727067458955011,0.356497378384721,0.948110273807448,0,0,3.06395645178409,0.36012218806262,0,0,1.95074257006501,1.07021290561242,2.63278432963394,0.304464949114599,0,0,0,0,0,0.120625849856312,0,0,0,6.11903496634682,0,0.619160603889667,0,0,0.136694227721025,0,0.169978429993855,0.139951452323658,0.138199973804424,0,0.158167996790568,0.406638934253697,0.324016022465404,0,0.218362563746178,0.134864346384821,0,0.26175594198403,0.259229946583586,0,0,0.149516546043979,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0,0,0,0,0.15241361331,0,0.0974578807397524,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,26.5433366030021,22.0956113523445,20.0513429703789,19.247556422493,28.0883833105963,29.4603619981983,37.8012600129811,27.4695933966774,24.9228324941313,26.9235362110946,0.415149390336707,1.99512436700516,1.70733605754134,2.18796045361465,2.09613162627982,1.65459157605013,2.66696073361938,2.06035057238894,1.60459604795908,2.27427490587418,2.78827229879264,3.2066478035633,2.90288673156635,4.86591158277006,4.19278923375977,5.23923060411381,4.51948871184936,5.20854895252004,2.47251540481984,1.76638704161277,2.74295401908332,2.66213709239006,2.62279808942053,1.0174249164263,2.72917203204459,3.80765735512544,2.74391959309159,2.10455769150274,3.66671107383827,1.12228454331548,2.72860541685601,3.74317033027141,0.818462086339379,3.71848418846318,2.70069255373598,2.24829520144151,3.27504251823572,1.71896843238639,0.382576664137687,0.220591419119515,0.231867835620421
|short_description=p5@Gria2
|short_description=p5@Gria2
}}
}}

Latest revision as of 17:45, 25 September 2015

Short description:p5@Gria2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Gria2_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 20bp_to_ENSMUST00000075316, ENSMUST00000107745, ENSMUST00000107746, NM_001039195, NM_001083806, NM_013540, uc008poa.1, uc008pob.1, uc008poc.1, uc008pod.1, uc008poe.1_5end
EntrezGene:Gria2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p5@Gria2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A35.53
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C34.25
Mouse Granule cells, donor2.CNhs12357.11731-123E31.59
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D57.05
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.78
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D94.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D54.64
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.80
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.45
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D37.71
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F311.62
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D711.52
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.17
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F44.03
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D86.25
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E45.03
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E59.57
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I611.15
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D614.14
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F613.38
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E18.57
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.80
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.74
adrenal gland, embryo E14.CNhs11038.406-44C51.21
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F51.06
adrenal gland, neonate N00.CNhs11191.1311-23C10.94
adrenal gland, neonate N25.CNhs11223.1377-27I30.50
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B214.05
cerebellum, neonate N30.CNhs11135.1395-42I227.23
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A414.08
corpus striatum, adult.CNhs10487.19-21D818.30
corpus striatum, neonate N00.CNhs11226.630-43F118.72
cortex, adult.CNhs10473.12-14D538.94
cortex, neonate N30.CNhs11107.1392-42F246.03
diencephalon, adult.CNhs10482.20-12F211.01
diencephalon, neonate N30.CNhs11201.1388-42B228.55
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B22.02
eyeball, adult.CNhs10484.31-12G41.05
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D41.21
eyeball, neonate N00.CNhs11207.633-15C62.38
eyeball, neonate N01.CNhs11140.1532-43E72.69
eyeball, neonate N02.CNhs11205.1551-44G82.90
eyeball, neonate N16.CNhs11188.777-19A24.66
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E849.63
hippocampus, neonate N00.CNhs11228.627-43G119.35
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.28
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C27.22
medulla oblongata, neonate N30.CNhs11200.1396-42A39.26
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.51
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.11
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.21
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.63
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D65.14
olfactory brain, adult.CNhs10489.18-22I930.20
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G83.06
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B91.95
pituitary gland, embryo E16.CNhs11036.449-43F61.07
pituitary gland, embryo E17.CNhs11039.1265-44F52.63
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C96.12
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A126.54
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A222.10
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A320.05
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D719.25
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A428.09
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A529.46
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A637.80
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A727.47
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A824.92
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A926.92
whole body, embryo E11.CNhs11014.324-5I80.42
whole body, embryo E12.CNhs10587.857-27C92.00
whole body, embryo E13.CNhs10512.372-23H21.71
whole body, embryo E14.5.CNhs10578.420-27D22.19
whole body, embryo E14.CNhs10519.395-14B12.10
whole body, embryo E16.CNhs10514.453-14F21.65
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.79
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.21
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.90
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G54.87
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G54.19
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G55.24
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G54.52
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G55.21
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.74
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.66
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.73
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.81
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.74
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.10
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.67
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.73
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.74
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.72
whole body, embryo E17.5.CNhs10513.490-9F92.70
whole body, embryo E17.CNhs10517.475-3I52.25
whole body, embryo E18.CNhs10516.493-3B33.28
whole body, neonate N00.CNhs10525.657-19C21.72
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)6.03e-1823
neuroblast (sensu Vertebrata)6.03e-1823
neuron1.38e-1533
neuronal stem cell1.38e-1533
neuroblast1.38e-1533
electrically signaling cell1.38e-1533
electrically responsive cell8.33e-1239
electrically active cell8.33e-1239
neural cell6.51e-1043
ectodermal cell1.69e-0944
neurectodermal cell1.69e-0944

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.71e-3354
central nervous system1.19e-3273
neural tube1.90e-3152
neural rod1.90e-3152
future spinal cord1.90e-3152
neural keel1.90e-3152
nervous system3.00e-3175
neurectoderm4.17e-3164
neural plate4.17e-3164
presumptive neural plate4.17e-3164
gray matter1.11e-2734
brain4.03e-2747
future brain4.03e-2747
ectoderm-derived structure1.17e-2695
ectoderm1.17e-2695
presumptive ectoderm1.17e-2695
regional part of brain5.34e-2646
ecto-epithelium4.91e-2573
pre-chordal neural plate1.38e-2449
anterior neural tube5.95e-2440
brain grey matter3.23e-2329
regional part of telencephalon3.23e-2329
telencephalon3.23e-2329
regional part of forebrain5.57e-2339
forebrain5.57e-2339
future forebrain5.57e-2339
structure with developmental contribution from neural crest9.35e-1892
cerebral cortex1.86e-1621
cerebral hemisphere1.86e-1621
pallium1.86e-1621
regional part of cerebral cortex3.66e-1317
occipital lobe7.11e-1210
visual cortex7.11e-1210
neocortex7.11e-1210
basal ganglion6.98e-088
nuclear complex of neuraxis6.98e-088
aggregate regional part of brain6.98e-088
collection of basal ganglia6.98e-088
cerebral subcortex6.98e-088
posterior neural tube8.36e-0812
chordal neural plate8.36e-0812
tube7.54e-07114
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