Personal tools

FFCP PHASE1:Mm9::chr4:109959224..109959246,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(5 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=15572
|EntrezGene=15572
|HGNC=
|HGNC=
|MCL_coexpression_id=826
|TSSclassifier=NA
|UniProt=A2A9R4
|UniProt=A2A9R4
|association_with_transcript=-3bp_to_ENSMUST00000138972_5end
|association_with_transcript=-3bp_to_ENSMUST00000138972_5end
|cluster_id=chr4:109959224..109959246,-
|description=CAGE_peak_3_at_Elavl4_5end
|description=CAGE_peak_3_at_Elavl4_5end
|id=chr4:109959224..109959246,-
|id=chr4:109959224..109959246,-
|ontology_enrichment_celltype=CL:0000540!3.97e-19!33;CL:0000047!3.97e-19!33;CL:0000031!3.97e-19!33;CL:0000404!3.97e-19!33;CL:0000117!1.13e-14!23;CL:0000337!1.13e-14!23;CL:0002319!9.18e-14!43;CL:0000393!1.56e-13!39;CL:0000211!1.56e-13!39;CL:0000221!4.68e-13!44;CL:0000133!4.68e-13!44;CL:0000055!1.60e-09!50
|ontology_enrichment_celltype=CL:0000540!3.97e-19!33;CL:0000047!3.97e-19!33;CL:0000031!3.97e-19!33;CL:0000404!3.97e-19!33;CL:0000117!1.13e-14!23;CL:0000337!1.13e-14!23;CL:0002319!9.18e-14!43;CL:0000393!1.56e-13!39;CL:0000211!1.56e-13!39;CL:0000221!4.68e-13!44;CL:0000133!4.68e-13!44;CL:0000055!1.60e-09!50
|ontology_enrichment_celltype_v019_2=CL:0000540,2.38e-25,33;CL:0000047,2.38e-25,33;CL:0000031,2.38e-25,33;CL:0000404,2.38e-25,33;CL:0000393,1.81e-19,39;CL:0000211,1.81e-19,39;CL:0000117,4.77e-19,23;CL:0000337,4.77e-19,23;CL:0002319,1.66e-16,43;CL:0000221,7.46e-16,44;CL:0000133,7.46e-16,44;CL:0000107,1.88e-08,9
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!4.97e-32!73;UBERON:0005743!4.97e-32!73;UBERON:0000073!6.59e-32!75;UBERON:0001016!6.59e-32!75;UBERON:0002346!6.66e-28!71;UBERON:0003075!6.66e-28!71;UBERON:0007284!6.66e-28!71;UBERON:0004121!7.60e-27!102;UBERON:0000924!7.60e-27!102;UBERON:0006601!7.60e-27!102;UBERON:0001049!4.92e-24!52;UBERON:0005068!4.92e-24!52;UBERON:0006241!4.92e-24!52;UBERON:0007135!4.92e-24!52;UBERON:0000955!1.41e-22!50;UBERON:0006238!1.41e-22!50;UBERON:0002616!4.27e-22!49;UBERON:0000033!1.16e-20!63;UBERON:0003056!1.49e-19!49;UBERON:0003080!2.26e-18!40;UBERON:0002020!2.42e-18!34;UBERON:0002780!1.07e-17!39;UBERON:0001890!1.07e-17!39;UBERON:0006240!1.07e-17!39;UBERON:0002791!4.17e-15!29;UBERON:0003528!4.17e-15!29;UBERON:0001893!4.17e-15!29;UBERON:0007811!1.40e-14!86;UBERON:0000153!1.41e-11!94;UBERON:0000956!1.59e-10!21;UBERON:0001869!1.59e-10!21;UBERON:0000203!1.59e-10!21;UBERON:0002619!1.34e-08!17;UBERON:0002021!2.78e-08!10;UBERON:0000411!2.78e-08!10;UBERON:0001950!2.78e-08!10
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.14e-40,73;UBERON:0001016,1.60e-38,75;UBERON:0000073,6.28e-32,54;UBERON:0002346,3.11e-30,64;UBERON:0003075,3.11e-30,64;UBERON:0007284,3.11e-30,64;UBERON:0001049,6.16e-30,52;UBERON:0005068,6.16e-30,52;UBERON:0006241,6.16e-30,52;UBERON:0007135,6.16e-30,52;UBERON:0004121,1.47e-29,95;UBERON:0000924,1.47e-29,95;UBERON:0006601,1.47e-29,95;UBERON:0000955,2.90e-25,47;UBERON:0006238,2.90e-25,47;UBERON:0002616,1.22e-24,46;UBERON:0002020,1.24e-24,34;UBERON:0010371,4.53e-24,73;UBERON:0003080,9.47e-23,40;UBERON:0002780,7.33e-22,39;UBERON:0001890,7.33e-22,39;UBERON:0006240,7.33e-22,39;UBERON:0003056,2.61e-20,49;UBERON:0003528,2.75e-20,29;UBERON:0002791,2.75e-20,29;UBERON:0001893,2.75e-20,29;UBERON:0010314,1.41e-16,92;UBERON:0000956,3.86e-14,21;UBERON:0001869,3.86e-14,21;UBERON:0000203,3.86e-14,21;UBERON:0002619,1.44e-11,17;UBERON:0002021,1.59e-10,10;UBERON:0000411,1.59e-10,10;UBERON:0001950,1.59e-10,10;UBERON:0002410,1.88e-08,9;UBERON:0003076,1.48e-07,12;UBERON:0003057,1.48e-07,12;UBERON:0002420,2.37e-07,8;UBERON:0007245,2.37e-07,8;UBERON:0010009,2.37e-07,8;UBERON:0010011,2.37e-07,8;UBERON:0000454,2.37e-07,8
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04103896362567,0,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0.139986421625363,0,0,0,0,0,0,0,6.87875966922632,11.6378015439847,6.33831403506179,0,0,0,0,0,0,0.384218305321555,4.35496371695606,2.43010688997043,2.73422449756797,3.99911378165325,7.50953039235486,5.75706756310284,5.07980996396653,5.51531271966013,12.1127469099328,6.51205424234457,6.91229399653096,8.04506355154182,8.14240028061446,6.77187381723788,5.862842979029,10.6924895906019,5.65353516774197,8.2496003932627,9.681274294339,8.20157561631323,0.151452386666368,0.755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0.742210695324124,1.04091196059682,0.913396434936424,0.230615497256059,0.452167921657868,1.17588707135705,0.125666591329675,0,0,0,0,0,0,0,13.1751358655196,11.9384622883669,0.255457055208591,0,0,0,8.08869452786043,2.28750301409313,5.40313714085317,9.21268897019065,7.67146371990992,6.02585329222724,4.70499662896497,0.101839363850316,0,0,0.420883711772948,0.390361328888111,0.689706313300419,0.900310649026746,0.60281927134286,1.7009124787832,1.92170580427275,1.59292931751539,1.03481348295606,0,0.378212160335639,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0.180062061461015,0.23674473558521,0.393528463494808,0.462801338662135,0.465067889500816,0,0,0.16455984991348,0,0,0.146199987425332,0,0,4.41608891984667,6.99751364179134,0,0.264450566663544,0.426576501070468,0.464473343720877,1.28867461322093,0.605050573870028,1.33426826306922,1.33157938278791,0,0.988193728344065,0,1.1937388322469,0.38992817423824,0,0.216138049874694,0,0.758671603812327,1.02823661348756,1.1270773567308,1.01825663922657,1.93952487167626,0.701358198903186,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0.390267295715598,0.157635144106191,0,0,0,0,0,0,0,0,0,6.90367536947505,5.39173758324135,0,0,7.88770548540642,6.24701990874622,11.6328634775711,1.67278158566786,4.23317480756549,4.24614796183249,10.9298889452221,11.3979784585412,11.8586333383957,2.89189184779626,0,0.178065603667255,0,0,0,0,0.302323556964751,0.377210159511796,0.295301892880773,1.53717573971964,1.03371317267288,0.363533729477506,0,0.316036757935816,0,0,2.7235168460303,1.26042765821917,0.517434735131018,1.07168517515796,3.54680467284547,1.07021290561242,1.15184314421485,0.608929898229199,0,0,0.441056796109924,0,0,0.120625849856312,0,0,0.874442509889552,6.86073617438886,0,0,0,0,0,0,0,0,0,0,1.26534397432454,1.21991680276109,0.432021363287205,0.627264888043406,1.74690050996942,0.134864346384821,0.41326727862668,0.785267825952089,0.259229946583586,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0.205421914329655,0.909445760844565,1.79026695667481,3.57626438606277,1.32214994471966,0.590758108698309,0.302899349844443,0.457240839929999,0.201652370273681,0.0974578807397524,0.192423683280659,0,0,0,0,0,0.19318959403219,0,0,0,0,7.90652579663893,9.20650473014354,9.73922372846974,10.1393377582776,10.9613203163303,9.82012066606611,8.10027000278167,9.00642406448441,9.9691329976525,7.24864436452548,3.00983307994112,1.19707462020309,3.07320490357441,2.18796045361465,1.25767897576789,0.735374033800057,0.44449345560323,1.85431551515005,1.92551525755089,0,1.2673964994512,1.88626341386076,1.68554713445788,1.92075457214608,1.83793500657962,2.85776214769844,1.39061191133827,0,0.824171801606613,1.76638704161277,2.05721551431249,1.24233064311536,2.14592570952589,1.0174249164263,2.82328141245992,0.930760686808441,1.28049581010941,2.10455769150274,1.22223702461276,3.36685362994643,1.54225523561426,1.18205378850676,0.409231043169689,2.16911577660352,1.15743966588685,2.99772693525535,0.701794825336225,0.644613162144895,0.191288332068843,0.441182838239031,0.927471342481686
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04103896362567,0,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0.139986421625363,0,0,0,0,0,0,0,6.87875966922632,11.6378015439847,6.33831403506179,0,0,0,0,0,0,0.384218305321555,4.35496371695606,2.43010688997043,2.73422449756797,3.99911378165325,7.50953039235486,5.75706756310284,5.07980996396653,5.51531271966013,12.1127469099328,6.51205424234457,6.91229399653096,8.04506355154182,8.14240028061446,6.77187381723788,5.862842979029,10.6924895906019,5.65353516774197,8.2496003932627,9.681274294339,8.20157561631323,0.151452386666368,0.755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0.742210695324124,1.04091196059682,0.913396434936424,0.230615497256059,0.452167921657868,1.17588707135705,0.125666591329675,0,0,0,0,0,0,0,13.1751358655196,11.9384622883669,0.255457055208591,0,0,0,8.08869452786043,2.28750301409313,5.40313714085317,9.21268897019065,7.67146371990992,6.02585329222724,4.70499662896497,0.101839363850316,0,0,0.420883711772948,0.390361328888111,0.689706313300419,0.900310649026746,0.60281927134286,1.7009124787832,1.92170580427275,1.59292931751539,1.03481348295606,0,0.378212160335639,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0.180062061461015,0.23674473558521,0.393528463494808,0.462801338662135,0.465067889500816,0,0,0.16455984991348,0,0,0.146199987425332,0,0,4.41608891984667,6.99751364179134,0,0.264450566663544,0.426576501070468,0.464473343720877,1.28867461322093,0.605050573870028,1.33426826306922,1.33157938278791,0,0.988193728344065,0,1.1937388322469,0.38992817423824,0,0.216138049874694,0,0.758671603812327,1.02823661348756,1.1270773567308,1.01825663922657,1.93952487167626,0.701358198903186,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0.390267295715598,0.157635144106191,0,0,0,0,0,0,0,0,0,6.90367536947505,5.39173758324135,0,0,7.88770548540642,6.24701990874622,11.6328634775711,1.67278158566786,4.23317480756549,4.24614796183249,10.9298889452221,11.3979784585412,11.8586333383957,2.89189184779626,0,0.178065603667255,0,0,0,0,0.302323556964751,0.377210159511796,0.295301892880773,1.53717573971964,1.03371317267288,0.363533729477506,0,0.316036757935816,0,0,2.7235168460303,1.26042765821917,0.517434735131018,1.07168517515796,3.54680467284547,1.07021290561242,1.15184314421485,0.608929898229199,0,0,0.441056796109924,0,0,0.120625849856312,0,0,0.874442509889552,6.86073617438886,0,0,0,0,0,0,0,0,0,0,1.26534397432454,1.21991680276109,0.432021363287205,0.627264888043406,1.74690050996942,0.134864346384821,0.41326727862668,0.785267825952089,0.259229946583586,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0.205421914329655,0.909445760844565,1.79026695667481,3.57626438606277,1.32214994471966,0.590758108698309,0.302899349844443,0.457240839929999,0.201652370273681,0.0974578807397524,0.192423683280659,0,0,0,0,0,0.19318959403219,0,0,0,0,7.90652579663893,9.20650473014354,9.73922372846974,10.1393377582776,10.9613203163303,9.82012066606611,8.10027000278167,9.00642406448441,9.9691329976525,7.24864436452548,3.00983307994112,1.19707462020309,3.07320490357441,2.18796045361465,1.25767897576789,0.735374033800057,0.44449345560323,1.85431551515005,1.92551525755089,0,1.2673964994512,1.88626341386076,1.68554713445788,1.92075457214608,1.83793500657962,2.85776214769844,1.39061191133827,0,0.824171801606613,1.76638704161277,2.05721551431249,1.24233064311536,2.14592570952589,1.0174249164263,2.82328141245992,0.930760686808441,1.28049581010941,2.10455769150274,1.22223702461276,3.36685362994643,1.54225523561426,1.18205378850676,0.409231043169689,2.16911577660352,1.15743966588685,2.99772693525535,0.701794825336225,0.644613162144895,0.191288332068843,0.441182838239031,0.927471342481686
|short_description=p3@Elavl4
|short_description=p3@Elavl4
}}
}}

Latest revision as of 03:54, 26 September 2015

Short description:p3@Elavl4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Elavl4_5end
Coexpression cluster:MCL_coexpression_mm9:826
Association with transcript: -3bp_to_ENSMUST00000138972_5end
EntrezGene:Elavl4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Elavl4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.04
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C36.88
Mouse Granule cells, donor2.CNhs12357.11731-123E311.64
Mouse Granule cells, donor3.CNhs12108.11636-122C76.34
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D54.35
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.43
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.73
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D57.51
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D25.76
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F25.08
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D65.52
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D312.11
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F36.51
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D76.91
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D48.05
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F48.14
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D86.77
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E45.86
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E510.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I65.65
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D68.25
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F69.68
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E18.20
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.76
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.74
adrenal gland, embryo E14.CNhs11038.406-44C51.04
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C11.18
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B213.18
cerebellum, neonate N30.CNhs11135.1395-42I211.94
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A48.09
corpus striatum, adult.CNhs10487.19-21D82.29
corpus striatum, neonate N00.CNhs11226.630-43F15.40
cortex, adult.CNhs10473.12-14D59.21
cortex, neonate N30.CNhs11107.1392-42F27.67
diencephalon, adult.CNhs10482.20-12F26.03
diencephalon, neonate N30.CNhs11201.1388-42B24.70
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.39
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C90.90
eyeball, embryo E17.CNhs11023.1261-18D40.60
eyeball, neonate N00.CNhs11207.633-15C61.70
eyeball, neonate N01.CNhs11140.1532-43E71.92
eyeball, neonate N02.CNhs11205.1551-44G81.59
eyeball, neonate N16.CNhs11188.777-19A21.03
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E84.42
hippocampus, neonate N00.CNhs11228.627-43G17.00
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D81.29
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D31.33
intestine, embryo E18.CNhs10526.1289-20F71.33
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.99
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F21.19
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.76
kidney, embryo E15.CNhs10997.434-16F81.03
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I21.02
kidney, embryo E18.CNhs11001.1288-20C71.94
kidney, neonate N00.CNhs11214.646-21G70.70
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C26.90
medulla oblongata, neonate N30.CNhs11200.1396-42A35.39
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E17.89
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E26.25
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E311.63
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.67
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D84.23
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D94.25
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D410.93
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D511.40
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D611.86
olfactory brain, adult.CNhs10489.18-22I92.89
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I71.54
pancreas, neonate N00.CNhs11105.645-26G91.03
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G82.72
pituitary gland, embryo E12.CNhs11018.346-16E61.26
pituitary gland, embryo E13.CNhs11009.370-44C70.52
pituitary gland, embryo E14.CNhs11037.398-44A51.07
pituitary gland, embryo E15.CNhs10592.427-16B93.55
pituitary gland, embryo E16.CNhs11036.449-43F61.07
pituitary gland, embryo E17.CNhs11039.1265-44F51.15
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C96.86
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.27
stomach, embryo E15.CNhs10603.1252-16G81.22
stomach, embryo E16.CNhs11022.459-17D40.43
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C61.75
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.41
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.91
thymus, embryo E17.CNhs10581.478-18C11.79
thymus, embryo E18.CNhs10595.1273-19G43.58
thymus, neonate N02.CNhs11181.1541-43F81.32
thymus, neonate N03.CNhs11137.2104-43C70.59
thymus, neonate N06.CNhs11197.681-26C40.30
thymus, neonate N07.CNhs11211.713-19D30.46
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A17.91
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A29.21
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A39.74
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D710.14
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A410.96
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A59.82
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A68.10
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A79.01
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A89.97
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A97.25
whole body, embryo E11.CNhs11014.324-5I83.01
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H23.07
whole body, embryo E14.5.CNhs10578.420-27D22.19
whole body, embryo E14.CNhs10519.395-14B11.26
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.85
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.89
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.69
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.92
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.84
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.39
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.15
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.82
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.10
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.17
whole body, embryo E17.5.CNhs10513.490-9F91.16
whole body, embryo E17.CNhs10517.475-3I53.00
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
central nervous system3.14e-4073
nervous system1.60e-3875
regional part of nervous system6.28e-3254
neurectoderm3.11e-3064
neural plate3.11e-3064
presumptive neural plate3.11e-3064
neural tube6.16e-3052
neural rod6.16e-3052
future spinal cord6.16e-3052
neural keel6.16e-3052
ectoderm-derived structure1.47e-2995
ectoderm1.47e-2995
presumptive ectoderm1.47e-2995
brain2.90e-2547
future brain2.90e-2547
regional part of brain1.22e-2446
gray matter1.24e-2434
ecto-epithelium4.53e-2473
anterior neural tube9.47e-2340
regional part of forebrain7.33e-2239
forebrain7.33e-2239
future forebrain7.33e-2239
pre-chordal neural plate2.61e-2049
brain grey matter2.75e-2029
regional part of telencephalon2.75e-2029
telencephalon2.75e-2029
structure with developmental contribution from neural crest1.41e-1692
cerebral cortex3.86e-1421
cerebral hemisphere3.86e-1421
pallium3.86e-1421
regional part of cerebral cortex1.44e-1117
occipital lobe1.59e-1010
visual cortex1.59e-1010
neocortex1.59e-1010
autonomic nervous system1.88e-089
posterior neural tube1.48e-0712
chordal neural plate1.48e-0712
basal ganglion2.37e-078
nuclear complex of neuraxis2.37e-078
aggregate regional part of brain2.37e-078
collection of basal ganglia2.37e-078
cerebral subcortex2.37e-078
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr4:109959224..109959246,-&oldid=4231536"