FFCP PHASE1:Mm9::chr8:87417888..87417920,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:87417888..87417920,+ | |||
|description=CAGE_peak_at_chr8:87417888..87417920,+ | |description=CAGE_peak_at_chr8:87417888..87417920,+ | ||
|id=chr8:87417888..87417920,+ | |id=chr8:87417888..87417920,+ | ||
|ontology_enrichment_celltype=CL:0000055!5.58e-23!50;CL:0000221!1.87e-21!44;CL:0000133!1.87e-21!44;CL:0002319!8.17e-21!43;CL:0000393!9.37e-18!39;CL:0000211!9.37e-18!39;CL:0000540!1.42e-14!33;CL:0000047!1.42e-14!33;CL:0000031!1.42e-14!33;CL:0000404!1.42e-14!33;CL:0002321!5.42e-13!70;CL:0000220!5.42e-13!70;CL:0000117!1.88e-09!23;CL:0000337!1.88e-09!23;CL:0000548!1.20e-07!115;CL:0000004!1.20e-07!115;CL:0000255!1.20e-07!115;CL:0000333!2.82e-07!10;CL:0000095!2.82e-07!10;CL:0000243!2.82e-07!10;CL:0000123!2.82e-07!10;CL:0000125!2.82e-07!10;CL:0000030!2.82e-07!10;CL:0000339!2.82e-07!10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,2.30e-34,44;CL:0000133,2.30e-34,44;CL:0002319,4.34e-33,43;CL:0000393,9.47e-29,39;CL:0000211,9.47e-29,39;CL:0002321,1.71e-28,70;CL:0000540,2.26e-22,33;CL:0000047,2.26e-22,33;CL:0000031,2.26e-22,33;CL:0000404,2.26e-22,33;CL:0000723,1.60e-14,91;CL:0000048,1.60e-14,91;CL:0000034,8.87e-14,97;CL:0000117,2.32e-12,23;CL:0000337,2.32e-12,23;CL:0002453,3.24e-12,8;CL:0000333,1.77e-11,10;CL:0000095,1.77e-11,10;CL:0000243,1.77e-11,10;CL:0000123,1.77e-11,10;CL:0000125,1.77e-11,10;CL:0000030,1.77e-11,10;CL:0000339,1.77e-11,10;CL:0000107,1.22e-10,9;CL:0000128,1.22e-09,6;CL:0000126,1.22e-09,6;CL:0000127,1.22e-09,6;CL:0000680,1.51e-07,6;CL:0000187,1.51e-07,6;CL:0000056,1.51e-07,6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!5.16e-20!75;UBERON:0001016!5.16e-20!75;UBERON:0001017!3.70e-19!73;UBERON:0005743!3.70e-19!73;UBERON:0004121!6.28e-15!102;UBERON:0000924!6.28e-15!102;UBERON:0006601!6.28e-15!102;UBERON:0001049!8.07e-11!52;UBERON:0005068!8.07e-11!52;UBERON:0006241!8.07e-11!52;UBERON:0007135!8.07e-11!52;UBERON:0002346!2.70e-10!71;UBERON:0003075!2.70e-10!71;UBERON:0007284!2.70e-10!71;UBERON:0002616!5.45e-10!49;UBERON:0000955!2.48e-09!50;UBERON:0006238!2.48e-09!50;UBERON:0002020!5.26e-09!34;UBERON:0000033!3.43e-08!63;UBERON:0004111!9.75e-08!122;UBERON:0000025!3.14e-07!114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,5.88e-26,75;UBERON:0001017,1.34e-25,73;UBERON:0004121,6.11e-19,95;UBERON:0000924,6.11e-19,95;UBERON:0006601,6.11e-19,95;UBERON:0000073,1.93e-13,54;UBERON:0002410,1.22e-10,9;UBERON:0002020,1.40e-10,34;UBERON:0001049,2.30e-10,52;UBERON:0005068,2.30e-10,52;UBERON:0006241,2.30e-10,52;UBERON:0007135,2.30e-10,52;UBERON:0000010,3.16e-10,11;UBERON:0002346,7.93e-10,64;UBERON:0003075,7.93e-10,64;UBERON:0007284,7.93e-10,64;UBERON:0010371,2.21e-09,73;UBERON:0010314,2.19e-08,92;UBERON:0001948,1.38e-07,5;UBERON:0002315,1.38e-07,5;UBERON:0002616,6.21e-07,46;UBERON:0003076,1.00e-06,12;UBERON:0003057,1.00e-06,12 | |||
|phase1_expression=2.5623815536767,0,0.454999239389536,0,0,0.16787927191189,0.233612640595526,0.387369970324729,0,0,0,0.159544317990673,0,0.611942816932982,0.666219523631325,0.202475267389826,0.699561878128147,0.157731082679119,0.548457734422955,0,3.06155844543851,0.297872853602656,0,0.639969691173627,0.22940928106717,0.57423196411502,0,0,0.190023419456374,0.504060259519861,0.221730510655305,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,2.7697299954627,2.83855407414641,1.65192076945513,7.82391344348039,8.06693078607652,3.95435128922049,10.1103547518627,3.63964696225943,8.62515386189829,0.335565212115473,0,0.336093799142464,1.80081605225163,2.57880095944881,1.54701627683233,0.606949382578793,0,1.90149421051854,0.677689064138264,2.66788438833342,0.449949858640699,0.988866362566974,0.7104801149461,4.19440154725767,6.14749288514487,1.03689612308478,0.405017814995072,0.630974884054146,8.56952953211411,6.40518768759679,0.857435594504678,0.862609239164127,2.75765635983006,5.50579404996943,6.00130489000382,8.1411462625809,1.18697658957174,0.548925861614458,2.08365348222704,7.53794097303729,10.1297269805702,3.81995619442025,4.41942878210502,7.83044244395066,1.1183966749518,0.984440513331393,1.43585964202892,0,0,0.679971333707751,1.07940638327563,0,0,8.28622078777336,2.55645483867087,4.1565760736459,1.06001872353102,3.23939865486365,1.28326477414318,0,0,0.216491041011214,0,0,2.16949371466214,0.517875767294343,0.742210695324124,0.520455980298408,0.304465478312141,0,0.60289056221049,0.352766121407114,0.502666365318702,0,0.289198713839823,0,0.161766849947409,0.220841518460394,0,0,0.585561594023094,1.25668024088073,0.255457055208591,0.11981512450592,0,0,0.449371918214468,1.37250180845588,0,1.04294592115366,0,0.83115217823824,0.162241263067758,0.203678727700633,0.248813941220186,2.0217820674694,0.210441855886474,0.260240885925407,0.229902104433473,0.180062129805349,0.150704817835715,0.340182495756639,0.384341160854549,0.281105173679186,0.517406741478031,0.431135985865684,0.378212160335639,0.703804496655795,0.43839146485515,0,0.696504333044333,0.61734640922383,0.59710280045548,0,0,0.284163499395593,0.828503090142008,0.469052119962192,0.180062061461015,0,0.787056926989615,0.154267112887378,1.16266972375204,0.536546802799238,0.116765342367169,0,0,0.243206428637567,0,0.439100230582101,0.268412837520744,0.210289948564127,0.514523061896422,0,0,0.426576501070468,0.464473343720877,0.128867461322093,0,0.22237804384487,0,0,0,0,0,0.19496408711912,0,0,0,0,0.456994050438915,0,0.610953983535943,0.387904974335251,0.210407459670956,0.442655759869801,0.295220295959204,0.156998727841375,0.863780147452604,0,0.333690211432188,0.196558995113203,0.674586337154561,0.405720242777006,0.241177159752417,0.763877555344259,0.287696137450811,0.162135226775035,0,0,0.372140947668503,0.312037673114561,0,0.358794827043824,0.482443521363367,0.554259570499814,0.37898282354097,0,0.339490171550376,0.469380496577004,0.837531287209079,0.476087281772027,0.585400943573396,0.315270288212382,0.44292937929755,0.318909537314974,0.163863314715738,0.518054945597687,0.289298117163023,1.50791283939272,1.08781136763742,0.491764273019036,0.275936746304732,0.642202359951168,0.586058432961016,0.163934945376675,0.252470927204373,2.52406575533005,3.51394869866975,3.01592756825919,1.43381278771531,2.45078541490634,1.41538265394416,2.02405350837447,2.33804686329049,2.76701444562566,0,0.141940085208269,0.534196811001766,0.162886959353576,0.659880491890142,0,0.242780636154981,0.604647113929502,0.754420319023592,0.295301892880773,0,0,0,0,0.316036757935816,1.05418608574999,0,3.06395645178409,0.36012218806262,1.16422815404479,1.07168517515796,0.709360934569094,0.535106452806212,0.164549020602121,0,0.23467170806371,0.42366414172764,1.10264199027481,0.49465875882444,0,0.180938774784468,0,0.164140899745061,0,0.370850604021019,0.512612642393558,0,0.740778109478847,1.31857919903284,0.820165366326151,0.686334519619568,0.169978429993855,0,0.138199973804424,0,0.474503990371703,0.203319467126849,0.324016022465404,0.627264888043406,0.87345025498471,0,0.165306911450672,0,0,0,0.56369293868419,0.598066184175915,0.165458490457098,0.388902376688095,0.774958940866387,0.506868376472335,0.234714477291508,0.2604087696879,0.419437377702843,0,0.288030006257865,0.316011120628178,0.405450430580328,0.308132871494482,0.51968329191118,0,0.198681354781265,0.120195449519969,0,0,0.15241361331,0.100826185136841,0.0974578807397524,0.0962118416403295,0,0.453460767230423,1.33191572024439,0.807424709485281,0.167884616364078,0.19318959403219,0.375364950902364,0.36630324853453,0,2.00628841614145,0,0.920650473014354,1.14579102687879,0.68741272937475,1.37016503954128,1.5107877947794,0,0.45032120322422,0.906284817968409,1.03552062350364,0.207574695168353,0.399024873401031,0.853668028770671,0.243106717068294,0.209613162627982,0,0.222246727801615,0,0.320919209591815,0.252697211763798,0.50695859978048,0,0.0936415074698824,0.192075457214608,0.631790158511746,0,0.347652977834566,0.192909220463705,0,0.588795680537589,1.02860775715625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| |phase1_expression=2.5623815536767,0,0.454999239389536,0,0,0.16787927191189,0.233612640595526,0.387369970324729,0,0,0,0.159544317990673,0,0.611942816932982,0.666219523631325,0.202475267389826,0.699561878128147,0.157731082679119,0.548457734422955,0,3.06155844543851,0.297872853602656,0,0.639969691173627,0.22940928106717,0.57423196411502,0,0,0.190023419456374,0.504060259519861,0.221730510655305,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,2.7697299954627,2.83855407414641,1.65192076945513,7.82391344348039,8.06693078607652,3.95435128922049,10.1103547518627,3.63964696225943,8.62515386189829,0.335565212115473,0,0.336093799142464,1.80081605225163,2.57880095944881,1.54701627683233,0.606949382578793,0,1.90149421051854,0.677689064138264,2.66788438833342,0.449949858640699,0.988866362566974,0.7104801149461,4.19440154725767,6.14749288514487,1.03689612308478,0.405017814995072,0.630974884054146,8.56952953211411,6.40518768759679,0.857435594504678,0.862609239164127,2.75765635983006,5.50579404996943,6.00130489000382,8.1411462625809,1.18697658957174,0.548925861614458,2.08365348222704,7.53794097303729,10.1297269805702,3.81995619442025,4.41942878210502,7.83044244395066,1.1183966749518,0.984440513331393,1.43585964202892,0,0,0.679971333707751,1.07940638327563,0,0,8.28622078777336,2.55645483867087,4.1565760736459,1.06001872353102,3.23939865486365,1.28326477414318,0,0,0.216491041011214,0,0,2.16949371466214,0.517875767294343,0.742210695324124,0.520455980298408,0.304465478312141,0,0.60289056221049,0.352766121407114,0.502666365318702,0,0.289198713839823,0,0.161766849947409,0.220841518460394,0,0,0.585561594023094,1.25668024088073,0.255457055208591,0.11981512450592,0,0,0.449371918214468,1.37250180845588,0,1.04294592115366,0,0.83115217823824,0.162241263067758,0.203678727700633,0.248813941220186,2.0217820674694,0.210441855886474,0.260240885925407,0.229902104433473,0.180062129805349,0.150704817835715,0.340182495756639,0.384341160854549,0.281105173679186,0.517406741478031,0.431135985865684,0.378212160335639,0.703804496655795,0.43839146485515,0,0.696504333044333,0.61734640922383,0.59710280045548,0,0,0.284163499395593,0.828503090142008,0.469052119962192,0.180062061461015,0,0.787056926989615,0.154267112887378,1.16266972375204,0.536546802799238,0.116765342367169,0,0,0.243206428637567,0,0.439100230582101,0.268412837520744,0.210289948564127,0.514523061896422,0,0,0.426576501070468,0.464473343720877,0.128867461322093,0,0.22237804384487,0,0,0,0,0,0.19496408711912,0,0,0,0,0.456994050438915,0,0.610953983535943,0.387904974335251,0.210407459670956,0.442655759869801,0.295220295959204,0.156998727841375,0.863780147452604,0,0.333690211432188,0.196558995113203,0.674586337154561,0.405720242777006,0.241177159752417,0.763877555344259,0.287696137450811,0.162135226775035,0,0,0.372140947668503,0.312037673114561,0,0.358794827043824,0.482443521363367,0.554259570499814,0.37898282354097,0,0.339490171550376,0.469380496577004,0.837531287209079,0.476087281772027,0.585400943573396,0.315270288212382,0.44292937929755,0.318909537314974,0.163863314715738,0.518054945597687,0.289298117163023,1.50791283939272,1.08781136763742,0.491764273019036,0.275936746304732,0.642202359951168,0.586058432961016,0.163934945376675,0.252470927204373,2.52406575533005,3.51394869866975,3.01592756825919,1.43381278771531,2.45078541490634,1.41538265394416,2.02405350837447,2.33804686329049,2.76701444562566,0,0.141940085208269,0.534196811001766,0.162886959353576,0.659880491890142,0,0.242780636154981,0.604647113929502,0.754420319023592,0.295301892880773,0,0,0,0,0.316036757935816,1.05418608574999,0,3.06395645178409,0.36012218806262,1.16422815404479,1.07168517515796,0.709360934569094,0.535106452806212,0.164549020602121,0,0.23467170806371,0.42366414172764,1.10264199027481,0.49465875882444,0,0.180938774784468,0,0.164140899745061,0,0.370850604021019,0.512612642393558,0,0.740778109478847,1.31857919903284,0.820165366326151,0.686334519619568,0.169978429993855,0,0.138199973804424,0,0.474503990371703,0.203319467126849,0.324016022465404,0.627264888043406,0.87345025498471,0,0.165306911450672,0,0,0,0.56369293868419,0.598066184175915,0.165458490457098,0.388902376688095,0.774958940866387,0.506868376472335,0.234714477291508,0.2604087696879,0.419437377702843,0,0.288030006257865,0.316011120628178,0.405450430580328,0.308132871494482,0.51968329191118,0,0.198681354781265,0.120195449519969,0,0,0.15241361331,0.100826185136841,0.0974578807397524,0.0962118416403295,0,0.453460767230423,1.33191572024439,0.807424709485281,0.167884616364078,0.19318959403219,0.375364950902364,0.36630324853453,0,2.00628841614145,0,0.920650473014354,1.14579102687879,0.68741272937475,1.37016503954128,1.5107877947794,0,0.45032120322422,0.906284817968409,1.03552062350364,0.207574695168353,0.399024873401031,0.853668028770671,0.243106717068294,0.209613162627982,0,0.222246727801615,0,0.320919209591815,0.252697211763798,0.50695859978048,0,0.0936415074698824,0.192075457214608,0.631790158511746,0,0.347652977834566,0.192909220463705,0,0.588795680537589,1.02860775715625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| ||
|short_description=p@chr8:87417888..87417920,+ | |short_description=p@chr8:87417888..87417920,+ | ||
}} | }} |
Latest revision as of 06:26, 4 August 2015
Short description: | p@chr8:87417888..87417920, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:87417888..87417920, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 2.30e-34 | 44 |
neurectodermal cell | 2.30e-34 | 44 |
neural cell | 4.34e-33 | 43 |
electrically responsive cell | 9.47e-29 | 39 |
electrically active cell | 9.47e-29 | 39 |
embryonic cell | 1.71e-28 | 70 |
neuron | 2.26e-22 | 33 |
neuronal stem cell | 2.26e-22 | 33 |
neuroblast | 2.26e-22 | 33 |
electrically signaling cell | 2.26e-22 | 33 |
somatic stem cell | 1.60e-14 | 91 |
multi fate stem cell | 1.60e-14 | 91 |
stem cell | 8.87e-14 | 97 |
CNS neuron (sensu Vertebrata) | 2.32e-12 | 23 |
neuroblast (sensu Vertebrata) | 2.32e-12 | 23 |
oligodendrocyte precursor cell | 3.24e-12 | 8 |
migratory neural crest cell | 1.77e-11 | 10 |
neuron associated cell | 1.77e-11 | 10 |
glial cell (sensu Vertebrata) | 1.77e-11 | 10 |
neuron associated cell (sensu Vertebrata) | 1.77e-11 | 10 |
glial cell | 1.77e-11 | 10 |
glioblast | 1.77e-11 | 10 |
glioblast (sensu Vertebrata) | 1.77e-11 | 10 |
autonomic neuron | 1.22e-10 | 9 |
oligodendrocyte | 1.22e-09 | 6 |
macroglial cell | 1.22e-09 | 6 |
astrocyte | 1.22e-09 | 6 |
muscle precursor cell | 1.51e-07 | 6 |
muscle cell | 1.51e-07 | 6 |
myoblast | 1.51e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
nervous system | 5.88e-26 | 75 |
central nervous system | 1.34e-25 | 73 |
ectoderm-derived structure | 6.11e-19 | 95 |
ectoderm | 6.11e-19 | 95 |
presumptive ectoderm | 6.11e-19 | 95 |
regional part of nervous system | 1.93e-13 | 54 |
autonomic nervous system | 1.22e-10 | 9 |
gray matter | 1.40e-10 | 34 |
neural tube | 2.30e-10 | 52 |
neural rod | 2.30e-10 | 52 |
future spinal cord | 2.30e-10 | 52 |
neural keel | 2.30e-10 | 52 |
peripheral nervous system | 3.16e-10 | 11 |
neurectoderm | 7.93e-10 | 64 |
neural plate | 7.93e-10 | 64 |
presumptive neural plate | 7.93e-10 | 64 |
ecto-epithelium | 2.21e-09 | 73 |
structure with developmental contribution from neural crest | 2.19e-08 | 92 |
regional part of spinal cord | 1.38e-07 | 5 |
gray matter of spinal cord | 1.38e-07 | 5 |
regional part of brain | 6.21e-07 | 46 |
posterior neural tube | 1.00e-06 | 12 |
chordal neural plate | 1.00e-06 | 12 |