FFCP PHASE1:Mm9::chr8:96676922..96676933,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=204 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:96676922..96676933,+ | |||
|description=CAGE_peak_at_chr8:96676922..96676933,+ | |description=CAGE_peak_at_chr8:96676922..96676933,+ | ||
|id=chr8:96676922..96676933,+ | |id=chr8:96676922..96676933,+ | ||
|ontology_enrichment_celltype=CL:0002319!6.19e-15!43;CL:0000221!1.81e-14!44;CL:0000133!1.81e-14!44;CL:0002453!4.72e-13!8;CL:0000333!1.33e-12!10;CL:0000095!1.33e-12!10;CL:0000243!1.33e-12!10;CL:0000123!1.33e-12!10;CL:0000125!1.33e-12!10;CL:0000030!1.33e-12!10;CL:0000339!1.33e-12!10;CL:0000055!4.56e-12!50;CL:0000117!8.87e-11!23;CL:0000337!8.87e-11!23;CL:0000128!3.47e-09!6;CL:0000126!3.47e-09!6;CL:0000127!3.47e-09!6;CL:0002321!4.06e-07!70;CL:0000220!4.06e-07!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0002453,3.34e-45,8;CL:0000333,3.99e-36,10;CL:0000095,3.99e-36,10;CL:0000243,3.99e-36,10;CL:0000123,3.99e-36,10;CL:0000125,3.99e-36,10;CL:0000030,3.99e-36,10;CL:0000339,3.99e-36,10;CL:0000128,8.59e-31,6;CL:0000126,8.59e-31,6;CL:0000127,8.59e-31,6;CL:0000878,2.44e-16,2;CL:0000129,2.44e-16,2;CL:0002605,1.14e-15,2;CL:0002604,1.14e-15,2;CL:0002319,1.89e-10,43;CL:0000221,3.37e-10,44;CL:0000133,3.37e-10,44;CL:0002194,1.25e-08,4;CL:0000766,1.25e-08,4;CL:0000234,1.25e-08,4;CL:0000576,1.25e-08,4;CL:0000235,1.25e-08,4;CL:0000864,1.25e-08,4;CL:0002009,1.25e-08,4;CL:0000040,1.25e-08,4;CL:0000559,1.25e-08,4 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!4.28e-31!75;UBERON:0001016!4.28e-31!75;UBERON:0001017!1.72e-30!73;UBERON:0005743!1.72e-30!73;UBERON:0001049!3.49e-28!52;UBERON:0005068!3.49e-28!52;UBERON:0006241!3.49e-28!52;UBERON:0007135!3.49e-28!52;UBERON:0002020!9.36e-27!34;UBERON:0000955!9.54e-26!50;UBERON:0006238!9.54e-26!50;UBERON:0002616!3.06e-24!49;UBERON:0004121!5.46e-23!102;UBERON:0000924!5.46e-23!102;UBERON:0006601!5.46e-23!102;UBERON:0002346!2.17e-21!71;UBERON:0003075!2.17e-21!71;UBERON:0007284!2.17e-21!71;UBERON:0000033!2.07e-20!63;UBERON:0000956!7.14e-20!21;UBERON:0001869!7.14e-20!21;UBERON:0000203!7.14e-20!21;UBERON:0002619!8.92e-20!17;UBERON:0002791!1.37e-19!29;UBERON:0003528!1.37e-19!29;UBERON:0001893!1.37e-19!29;UBERON:0003080!7.43e-18!40;UBERON:0002780!9.60e-17!39;UBERON:0001890!9.60e-17!39;UBERON:0006240!9.60e-17!39;UBERON:0003056!5.70e-15!49;UBERON:0007811!7.24e-13!86;UBERON:0002021!1.00e-11!10;UBERON:0000411!1.00e-11!10;UBERON:0001950!1.00e-11!10;UBERON:0003076!2.71e-11!12;UBERON:0003057!2.71e-11!12;UBERON:0000153!4.01e-11!94;UBERON:0000025!3.98e-10!114;UBERON:0001954!1.88e-09!7;UBERON:0003022!1.88e-09!7;UBERON:0002421!1.88e-09!7;UBERON:0000349!1.88e-09!7;UBERON:0002600!1.88e-09!7;UBERON:0001948!4.60e-09!5;UBERON:0002315!4.60e-09!5;UBERON:0004111!6.17e-09!122;UBERON:0002950!7.77e-08!4;UBERON:0001891!7.77e-08!4;UBERON:0009616!7.77e-08!4;UBERON:0002298!1.59e-07!6;UBERON:0002240!1.76e-07!6;UBERON:0005174!1.76e-07!6;UBERON:0001137!1.76e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.35e-13,73;UBERON:0001016,3.30e-13,75;UBERON:0002619,1.07e-10,17;UBERON:0004121,3.22e-10,95;UBERON:0000924,3.22e-10,95;UBERON:0006601,3.22e-10,95;UBERON:0002616,1.62e-09,46;UBERON:0000955,2.67e-09,47;UBERON:0006238,2.67e-09,47;UBERON:0003528,9.89e-09,29;UBERON:0002791,9.89e-09,29;UBERON:0001893,9.89e-09,29;UBERON:0000956,1.16e-08,21;UBERON:0001869,1.16e-08,21;UBERON:0000203,1.16e-08,21;UBERON:0002037,2.08e-08,4;UBERON:0002680,2.08e-08,4;UBERON:0001895,2.08e-08,4;UBERON:0010092,2.08e-08,4;UBERON:0006215,2.08e-08,4;UBERON:0001049,2.42e-08,52;UBERON:0005068,2.42e-08,52;UBERON:0006241,2.42e-08,52;UBERON:0007135,2.42e-08,52;UBERON:0000073,5.23e-08,54;UBERON:0002020,2.08e-07,34;UBERON:0002021,4.70e-07,10;UBERON:0000411,4.70e-07,10;UBERON:0001950,4.70e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.66865406589161,1.31811709640683,7.58276606389705,1.81982348112971,4.31257693094915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.5912024314049,20.7477884873639,0,0.135005938331691,0,0.285650984403804,0.220868540951614,0,0.0958454710182364,0.919218786610021,0,0.383062014255563,0.614426133024974,0,0,0,0.279182999001381,1.12552522006336,0.916789486660861,0.294628585473668,0.569486723196412,0.186399445825301,0.075726193333184,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,2.09446706813455,0,0,0,0,0.149790639404823,0,0,0.173824320192276,0,0.41557608911912,0,0,0.124406970610093,0,0,0,0.229902104433473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0.308713837137853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0.963963949265421,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428674070063185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149516546043979,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0,1.71868654031819,0.171853182343688,1.37016503954128,0.755393897389701,0,0.45032120322422,1.35942722695261,0.51776031175182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0.192909220463705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220591419119515,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.66865406589161,1.31811709640683,7.58276606389705,1.81982348112971,4.31257693094915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.5912024314049,20.7477884873639,0,0.135005938331691,0,0.285650984403804,0.220868540951614,0,0.0958454710182364,0.919218786610021,0,0.383062014255563,0.614426133024974,0,0,0,0.279182999001381,1.12552522006336,0.916789486660861,0.294628585473668,0.569486723196412,0.186399445825301,0.075726193333184,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,2.09446706813455,0,0,0,0,0.149790639404823,0,0,0.173824320192276,0,0.41557608911912,0,0,0.124406970610093,0,0,0,0.229902104433473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0.308713837137853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0.963963949265421,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428674070063185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149516546043979,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0,1.71868654031819,0.171853182343688,1.37016503954128,0.755393897389701,0,0.45032120322422,1.35942722695261,0.51776031175182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0.192909220463705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220591419119515,0 | ||
|short_description=p@chr8:96676922..96676933,+ | |short_description=p@chr8:96676922..96676933,+ | ||
}} | }} |
Latest revision as of 08:57, 4 August 2015
Short description: | p@chr8:96676922..96676933, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:96676922..96676933, + |
Coexpression cluster: | MCL_coexpression_mm9:204 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte precursor cell | 3.34e-45 | 8 |
migratory neural crest cell | 3.99e-36 | 10 |
neuron associated cell | 3.99e-36 | 10 |
glial cell (sensu Vertebrata) | 3.99e-36 | 10 |
neuron associated cell (sensu Vertebrata) | 3.99e-36 | 10 |
glial cell | 3.99e-36 | 10 |
glioblast | 3.99e-36 | 10 |
glioblast (sensu Vertebrata) | 3.99e-36 | 10 |
oligodendrocyte | 8.59e-31 | 6 |
macroglial cell | 8.59e-31 | 6 |
astrocyte | 8.59e-31 | 6 |
central nervous system macrophage | 2.44e-16 | 2 |
microglial cell | 2.44e-16 | 2 |
astrocyte of the cerebral cortex | 1.14e-15 | 2 |
astrocyte of the hippocampus | 1.14e-15 | 2 |
neural cell | 1.89e-10 | 43 |
ectodermal cell | 3.37e-10 | 44 |
neurectodermal cell | 3.37e-10 | 44 |
monopoietic cell | 1.25e-08 | 4 |
myeloid leukocyte | 1.25e-08 | 4 |
phagocyte | 1.25e-08 | 4 |
monocyte | 1.25e-08 | 4 |
macrophage | 1.25e-08 | 4 |
tissue-resident macrophage | 1.25e-08 | 4 |
macrophage dendritic cell progenitor | 1.25e-08 | 4 |
monoblast | 1.25e-08 | 4 |
promonocyte | 1.25e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 1.35e-13 | 73 |
nervous system | 3.30e-13 | 75 |
regional part of cerebral cortex | 1.07e-10 | 17 |
ectoderm-derived structure | 3.22e-10 | 95 |
ectoderm | 3.22e-10 | 95 |
presumptive ectoderm | 3.22e-10 | 95 |
regional part of brain | 1.62e-09 | 46 |
brain | 2.67e-09 | 47 |
future brain | 2.67e-09 | 47 |
brain grey matter | 9.89e-09 | 29 |
regional part of telencephalon | 9.89e-09 | 29 |
telencephalon | 9.89e-09 | 29 |
cerebral cortex | 1.16e-08 | 21 |
cerebral hemisphere | 1.16e-08 | 21 |
pallium | 1.16e-08 | 21 |
cerebellum | 2.08e-08 | 4 |
regional part of metencephalon | 2.08e-08 | 4 |
metencephalon | 2.08e-08 | 4 |
future metencephalon | 2.08e-08 | 4 |
rhombic lip | 2.08e-08 | 4 |
neural tube | 2.42e-08 | 52 |
neural rod | 2.42e-08 | 52 |
future spinal cord | 2.42e-08 | 52 |
neural keel | 2.42e-08 | 52 |
regional part of nervous system | 5.23e-08 | 54 |
gray matter | 2.08e-07 | 34 |
occipital lobe | 4.70e-07 | 10 |
visual cortex | 4.70e-07 | 10 |
neocortex | 4.70e-07 | 10 |