FF:10759-110E3: Difference between revisions

Revision as of 19:48, 9 July 2012

Name:	medulloblastoma cell line:ONS-76
Species:	Human (Homo sapiens)
Library ID:	{{{library_id}}}
Sample type:	{{{sample_category}}}
Genomic View:	UCSC
CAGEd-oPOSSUM:	link

Additional information

Sample information

strain	NA
tissue	brain
dev stage	NA
sex	female
age	2
cell type	neurectodermal cell
cell line	ONS-76
company	JAPAN HEALTH SCIENCES FOUNDATION - Health Science Research Resources Bank
collaboration	FANTOM5 OSC CORE (contact: Al Forrest)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	NA
catalog number	NA
sample type	total RNA
extraction protocol (Details)	OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

Download raw sequence, BAM & CTSS

Hg19

BAM	CTSS
[{{{hg19bam}}} download]	[{{{hg19ctss}}} donwload]

Hg38

BAM	CTSS
[{{{hg38bam}}} download]	[{{{hg38ctss}}} donwload]

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	0.207
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	0.528
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0.0969
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	-0.124
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	0.0159
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	-0.115
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	-0.146
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0.138
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	0.454
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	0
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	-0.0214
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0.00114
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	0.557
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0.0943
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0.0511
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0.143
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0.0897
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data no result for this sample

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs11861

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	6.89174e-4
MA0003.1	MA0003.1	0.0429
MA0004.1	MA0004.1	0.962
MA0006.1	MA0006.1	0.918
MA0007.1	MA0007.1	0.594
MA0009.1	MA0009.1	0.406
MA0014.1	MA0014.1	0.678
MA0017.1	MA0017.1	0.119
MA0018.2	MA0018.2	0.0367
MA0019.1	MA0019.1	0.748
MA0024.1	MA0024.1	2.00983e-7
MA0025.1	MA0025.1	0.727
MA0027.1	MA0027.1	0.851
MA0028.1	MA0028.1	0.00113
MA0029.1	MA0029.1	0.956
MA0030.1	MA0030.1	0.512
MA0031.1	MA0031.1	0.744
MA0035.2	MA0035.2	0.679
MA0038.1	MA0038.1	2.63438e-4
MA0039.2	MA0039.2	0.292
MA0040.1	MA0040.1	0.259
MA0041.1	MA0041.1	0.408
MA0042.1	MA0042.1	0.821
MA0043.1	MA0043.1	0.382
MA0046.1	MA0046.1	0.578
MA0047.2	MA0047.2	0.0704
MA0048.1	MA0048.1	0.25
MA0050.1	MA0050.1	5.81507e-6
MA0051.1	MA0051.1	0.00184
MA0052.1	MA0052.1	0.418
MA0055.1	MA0055.1	0.0243
MA0057.1	MA0057.1	0.465
MA0058.1	MA0058.1	0.713
MA0059.1	MA0059.1	0.838
MA0060.1	MA0060.1	2.36552e-19
MA0061.1	MA0061.1	0.013
MA0062.2	MA0062.2	1.46325e-5
MA0065.2	MA0065.2	0.103
MA0066.1	MA0066.1	0.201
MA0067.1	MA0067.1	0.343
MA0068.1	MA0068.1	0.458
MA0069.1	MA0069.1	0.561
MA0070.1	MA0070.1	0.172
MA0071.1	MA0071.1	0.167
MA0072.1	MA0072.1	0.469
MA0073.1	MA0073.1	0.968
MA0074.1	MA0074.1	0.273
MA0076.1	MA0076.1	5.15105e-5
MA0077.1	MA0077.1	0.01
MA0078.1	MA0078.1	0.452
MA0079.2	MA0079.2	0.673
MA0080.2	MA0080.2	7.82578e-9
MA0081.1	MA0081.1	0.552
MA0083.1	MA0083.1	0.00966
MA0084.1	MA0084.1	0.527
MA0087.1	MA0087.1	0.965
MA0088.1	MA0088.1	0.88
MA0090.1	MA0090.1	0.507
MA0091.1	MA0091.1	0.00681
MA0092.1	MA0092.1	0.264
MA0093.1	MA0093.1	0.903
MA0099.2	MA0099.2	0.75
MA0100.1	MA0100.1	0.0869
MA0101.1	MA0101.1	0.507
MA0102.2	MA0102.2	0.00291
MA0103.1	MA0103.1	0.219
MA0104.2	MA0104.2	0.51
MA0105.1	MA0105.1	1.23122e-4
MA0106.1	MA0106.1	0.00279
MA0107.1	MA0107.1	0.206
MA0108.2	MA0108.2	0.459
MA0111.1	MA0111.1	0.793
MA0112.2	MA0112.2	7.42303e-5
MA0113.1	MA0113.1	0.0736
MA0114.1	MA0114.1	0.294
MA0115.1	MA0115.1	0.536
MA0116.1	MA0116.1	0.00277
MA0117.1	MA0117.1	0.258
MA0119.1	MA0119.1	0.759
MA0122.1	MA0122.1	0.594
MA0124.1	MA0124.1	0.518
MA0125.1	MA0125.1	0.0195
MA0131.1	MA0131.1	0.147
MA0135.1	MA0135.1	0.484
MA0136.1	MA0136.1	0.00347
MA0137.2	MA0137.2	0.193
MA0138.2	MA0138.2	0.08
MA0139.1	MA0139.1	0.207
MA0140.1	MA0140.1	0.738
MA0141.1	MA0141.1	0.443
MA0142.1	MA0142.1	0.0866
MA0143.1	MA0143.1	0.619
MA0144.1	MA0144.1	0.109
MA0145.1	MA0145.1	0.197
MA0146.1	MA0146.1	0.66
MA0147.1	MA0147.1	0.484
MA0148.1	MA0148.1	0.0112
MA0149.1	MA0149.1	0.454
MA0150.1	MA0150.1	0.285
MA0152.1	MA0152.1	0.928
MA0153.1	MA0153.1	0.962
MA0154.1	MA0154.1	0.00931
MA0155.1	MA0155.1	0.0916
MA0156.1	MA0156.1	0.71
MA0157.1	MA0157.1	0.562
MA0159.1	MA0159.1	0.0148
MA0160.1	MA0160.1	0.501
MA0162.1	MA0162.1	0.235
MA0163.1	MA0163.1	2.00905e-6
MA0164.1	MA0164.1	0.949
MA0258.1	MA0258.1	6.72908e-4
MA0259.1	MA0259.1	0.255

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs11861

Novel motif	Logo	P-value
1	1	0.361
10	10	0.133
100	100	0.864
101	101	0.308
102	102	0.545
103	103	0.277
104	104	0.872
105	105	0.817
106	106	0.00693
107	107	0.202
108	108	0.717
109	109	0.352
11	11	0.116
110	110	0.219
111	111	0.836
112	112	0.00976
113	113	0.858
114	114	0.193
115	115	0.722
116	116	0.379
117	117	0.218
118	118	0.487
119	119	0.0846
12	12	0.584
120	120	0.498
121	121	0.828
122	122	0.762
123	123	0.798
124	124	0.0712
125	125	0.478
126	126	0.252
127	127	0.841
128	128	0.0397
129	129	0.185
13	13	0.394
130	130	0.0786
131	131	0.807
132	132	0.925
133	133	0.033
134	134	0.125
135	135	0.0514
136	136	0.279
137	137	0.0482
138	138	0.216
139	139	0.00984
14	14	0.67
140	140	0.101
141	141	0.383
142	142	0.659
143	143	0.0362
144	144	0.146
145	145	0.164
146	146	0.942
147	147	0.521
148	148	0.113
149	149	0.0508
15	15	0.171
150	150	0.768
151	151	0.462
152	152	0.392
153	153	0.298
154	154	0.582
155	155	0.727
156	156	0.975
157	157	0.187
158	158	0.665
159	159	0.651
16	16	0.243
160	160	0.612
161	161	0.637
162	162	0.699
163	163	0.317
164	164	0.0699
165	165	0.659
166	166	0.0495
167	167	0.629
168	168	0.218
169	169	0.0824
17	17	0.116
18	18	0.0787
19	19	0.0979
2	2	0.177
20	20	0.761
21	21	0.153
22	22	0.229
23	23	0.0451
24	24	0.6
25	25	0.63
26	26	0.508
27	27	0.148
28	28	0.802
29	29	0.331
3	3	0.152
30	30	0.943
31	31	0.503
32	32	0.00238
33	33	0.479
34	34	0.277
35	35	0.0559
36	36	0.371
37	37	0.0938
38	38	0.556
39	39	0.389
4	4	0.859
40	40	0.474
41	41	0.367
42	42	0.967
43	43	0.0477
44	44	0.335
45	45	0.529
46	46	0.164
47	47	0.679
48	48	0.505
49	49	0.0984
5	5	0.0581
50	50	0.698
51	51	0.436
52	52	0.105
53	53	0.623
54	54	0.515
55	55	0.505
56	56	0.503
57	57	0.77
58	58	0.0733
59	59	0.0435
6	6	0.289
60	60	0.0277
61	61	0.477
62	62	0.00791
63	63	0.319
64	64	0.383
65	65	0.119
66	66	0.085
67	67	0.424
68	68	0.683
69	69	0.788
7	7	0.505
70	70	0.0124
71	71	0.147
72	72	0.255
73	73	0.273
74	74	0.591
75	75	0.189
76	76	0.754
77	77	0.182
78	78	0.262
79	79	0.00823
8	8	0.226
80	80	0.0639
81	81	0.176
82	82	0.00834
83	83	0.844
84	84	0.303
85	85	7.20424e-4
86	86	0.179
87	87	0.585
88	88	0.4
89	89	0.133
9	9	0.183
90	90	0.0424
91	91	0.184
92	92	0.00524
93	93	0.387
94	94	0.126
95	95	0.501
96	96	0.0482
97	97	0.787
98	98	0.434
99	99	0.919

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs11861

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0000210 human sample
FF:0101359 medulloblastoma cell line sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0002371 (somatic cell)
0002319 (neural cell)
0000095 (neuron associated cell)
0000243 (glial cell (sensu Vertebrata))
0000125 (glial cell)
0000255 (eukaryotic cell)

DOID: Disease
4 (disease)
0050686 (organ system cancer)
162 (cancer)
14566 (disease of cellular proliferation)
3093 (nervous system cancer)

UBERON: Anatomy
0000468 (multi-cellular organism)
0000955 (brain)
0004121 (ectoderm-derived structure)
0011216 (organ system subdivision)
0000062 (organ)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000477 (anatomical cluster)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0010317 (germ layer / neural crest derived structure)
0001017 (central nervous system)
0001016 (nervous system)

FF: FANTOM5
0000102 (sample by type)
0000003 (cell line sample)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0100711 (glioma cell line sample)
0100255 (brain cell line sample)
0100690 (brain cancer cell line sample)
0101531 (glial cell line sample)
0101359 (medulloblastoma cell line sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
CL:0000133 (neurectodermal cell)
CL:0000339 (glioblast (sensu Vertebrata))
CL:0000221 (ectodermal cell)
UBERON:0002532 (epiblast (generic))
UBERON:0006601 (presumptive ectoderm)
UBERON:0006238 (future brain)
UBERON:0010316 (germ layer / neural crest)

@@ Line 10: / Line 10: @@
 |def=
 |expression_enrichment_score=chr12:66218598..66218645,+!p2@HMGA2!2.00!435.56!HMGA2;;chr12:66218255..66218304,+!p3@HMGA2!1.98!245.59!HMGA2;;chr3:189507432..189507459,+!p1@TP63!1.89!76.86!TP63;;chr12:66218212..66218244,+!p5@HMGA2!1.73!75.24!HMGA2;;chr6:1312325..1312340,+!p1@FOXQ1!1.62!65.86!FOXQ1;;chr3:189349162..189349207,+!p2@TP63!1.61!39.37!TP63;;chr6:10412600..10412637,-!p1@TFAP2A!1.57!58.99!TFAP2A;;chr14:29235961..29236008,+!p1@FOXG1!1.52!31.99!FOXG1;;chr12:66218183..66218209,+!p4@HMGA2!1.44!50.62!HMGA2;;chr8:10588010..10588030,-!p1@SOX7!1.44!26.25!SOX7;;chr12:66218836..66218888,+!p1@HMGA2!1.41!220.34!HMGA2;;chr12:66218573..66218596,+!p7@HMGA2!1.39!34.99!HMGA2;;chr1:6479968..6479986,-!p1@HES2!1.39!23.62!HES2;;chr2:176969228..176969260,+!p1@HOXD11!1.37!22.50!HOXD11;;chr5:2751762..2751784,-!p1@IRX2!1.35!21.62!IRX2;;chrX:2418949..2419024,-!p1@DHRSX,p1@ZBED1!1.26!17.37!ZBED1;;chr5:134369905..134369972,-!p1@PITX1!1.24!24.87!PITX1;;chr6:10415276..10415341,-!p2@TFAP2A!1.24!20.00!TFAP2A;;chr2:5832508..5832524,+!p1@SOX11!1.23!16.12!SOX11;;chr20:22564895..22564910,-!p1@FOXA2!1.21!15.12!FOXA2;;chr12:66218378..66218401,+!p6@HMGA2!1.19!22.62!HMGA2;;chr6:10412392..10412409,-!p4@TFAP2A!1.19!16.62!TFAP2A;;chr12:66218443..66218461,+!p8@HMGA2!1.17!17.75!HMGA2;;chr19:22398550..22398579,-!p@chr19:22398550..22398579,-!1.17!13.87!ZNF676;;chr7:27153454..27153469,-!p2@HOXA3!1.17!13.75!HOXA3;;chr3:21792585..21792625,-!p2@ZNF385D!1.16!15.00!ZNF385D;;chr3:21792682..21792720,-!p1@ZNF385D!1.15!13.12!ZNF385D;;chr9:14314131..14314147,-!p2@NFIB!1.12!67.24!NFIB;;chr12:66218469..66218477,+!p16@HMGA2!1.12!12.25!HMGA2;;chr1:50889103..50889145,-!p1@DMRTA2!1.12!12.12!DMRTA2;;chr3:181429704..181429722,+!p1@SOX2!1.10!11.50!SOX2;;chr12:66218904..66218913,+!p11@HMGA2!1.09!11.37!HMGA2;;chr19:22817119..22817145,+!p1@ZNF492!1.08!18.37!ZNF492;;chr17:41623692..41623715,-!p1@ETV4!1.07!45.87!ETV4;;chr20:42295745..42295765,+!p1@MYBL2!1.06!173.47!MYBL2;;chr20:42295713..42295738,+!p2@MYBL2!1.06!62.12!MYBL2;;chr10:48355030..48355090,+!p1@ZNF488!1.06!13.50!ZNF488;;chr6:10412576..10412599,-!p5@TFAP2A!1.06!10.50!TFAP2A;;chr19:22193731..22193751,-!p1@ZNF208!1.06!10.50!ZNF208;;chr22:19748231..19748317,+!p1@TBX1!1.06!10.50!TBX1;;chr7:26191809..26191890,+!p1@NFE2L3!1.04!50.49!NFE2L3;;chr20:50721803..50721857,-!p2@ZFP64!1.04!15.87!ZFP64;;chr2:176969179..176969226,+!p2@HOXD11!1.04!9.87!HOXD11;;chr17:70117153..70117174,+!p1@SOX9!1.01!96.48!SOX9;;chr9:14314106..14314119,-!p5@NFIB!0.98!15.62!NFIB;;chr12:66218420..66218439,+!p12@HMGA2!0.98!8.62!HMGA2;;chr5:134369879..134369898,-!p2@PITX1!0.98!8.62!PITX1;;chr2:46524897..46524911,+!p2@EPAS1!0.97!24.00!EPAS1;;chr7:42276787..42276815,-!p1@GLI3!0.97!22.62!GLI3;;chr16:86600426..86600441,+!p1@FOXC2!0.96!20.50!FOXC2;;chr3:169381420..169381535,-!p1@MECOM!0.96!9.50!MECOM;;chr9:1050331..1050363,+!p1@DMRT2!0.95!7.87!DMRT2;;chr19:22605136..22605154,-!p1@ZNF98!0.95!7.87!ZNF98;;chr3:21792631..21792665,-!p3@ZNF385D!0.94!7.75!ZNF385D;;chr19:9609272..9609297,-!p1@ZNF560!0.92!7.37!ZNF560;;chr17:41277372..41277418,-!p1@BRCA1!0.91!27.25!BRCA1;;chr3:181429741..181429767,+!p2@SOX2!0.90!7.00!SOX2;;chr12:66357214..66357233,+!p13@HMGA2!0.90!6.87!HMGA2;;chr14:37131058..37131139,+!p1@PAX9!0.89!6.75!PAX9;;chr17:7492684..7492778,-!p2@SOX15!0.86!13.62!SOX15;;chr8:106330656..106330684,+!p1@ZFPM2!0.85!16.62!ZFPM2;;chr14:29236269..29236285,+!p3@FOXG1!0.85!6.00!FOXG1;;chr19:23433144..23433204,-!p1@ZNF724P!0.84!28.00!ZNF724P;;chr10:8095593..8095625,+!p3@GATA3!0.84!7.12!GATA3;;chr12:66358080..66358094,+!p15@HMGA2!0.84!5.87!HMGA2;;chr3:189507460..189507471,+!p3@TP63!0.84!5.87!TP63;;chr5:2751785..2751808,-!p2@IRX2!0.83!5.75!IRX2;;chr12:66218923..66218934,+!p14@HMGA2!0.82!5.62!HMGA2;;chr7:42276822..42276895,-!p2@GLI3!0.81!17.37!GLI3;;chr19:22235279..22235301,+!p1@ZNF257!0.80!10.62!ZNF257;;chr3:147111198..147111225,+!p4@ZIC1!0.80!5.25!ZIC1;;chr6:1389789..1389821,+!p1@FOXF2!0.79!7.37!FOXF2;;chr12:66218152..66218174,+!p10@HMGA2!0.79!5.62!HMGA2;;chr7:156803329..156803362,-!p1@MNX1!0.79!5.12!MNX1;;chr12:125002827..125002855,-!p5@NCOR2!0.78!7.50!NCOR2;;chr8:11561684..11561751,+!p1@GATA4!0.78!5.00!GATA4;;chr21:36421535..36421610,-!p2@RUNX1!0.77!18.75!RUNX1;;chr19:22034809..22034878,-!p2@ZNF43!0.77!18.62!ZNF43;;chr17:46687959..46688007,-!p2@HOXB7!0.77!7.00!HOXB7;;chr18:55102598..55102623,+!p1@ONECUT2!0.77!4.87!ONECUT2;;chr9:14180778..14180808,-!p15@NFIB!0.77!4.87!NFIB;;chr9:14314066..14314075,-!p11@NFIB!0.77!4.87!NFIB;;chr3:189348969..189349018,+!p4@TP63!0.77!4.87!TP63;;chr19:22605097..22605121,-!p2@ZNF98!0.76!4.75!ZNF98;;chr16:29818199..29818216,+!p11@MAZ!0.75!8.00!MAZ;;chr2:122042770..122042785,-!p1@TFCP2L1!0.75!4.62!TFCP2L1;;chr5:133450365..133450444,+!p1@TCF7!0.74!22.75!TCF7;;chr3:71630980..71631110,-!p3@FOXP1!0.74!17.00!FOXP1;;chr17:41622765..41622821,-!p2@ETV4!0.74!7.25!ETV4;;chr20:22565185..22565223,-!p3@FOXA2!0.74!4.50!FOXA2;;chr9:14314566..14314618,-!p1@NFIB!0.72!57.49!NFIB;;chr11:65667884..65667895,-!p2@FOSL1!0.72!18.37!FOSL1;;chr9:16705069..16705086,-!p3@BNC2!0.72!4.25!BNC2;;chr12:80084737..80084763,-!p3@PAWR!0.71!17.00!PAWR;;chr20:32274179..32274213,-!p1@E2F1!0.69!29.50!E2F1;;chr16:29818160..29818188,+!p6@MAZ!0.68!20.25!MAZ;;chr17:35294075..35294102,+!p1@ENST00000559335!0.68!3.75!LHX1;;chr6:10415484..10415508,-!p3@TFAP2A!0.68!3.75!TFAP2A;;chr14:29236169..29236216,+!p6@FOXG1!0.68!3.75!FOXG1;;chr12:66218003..66218018,+!p9@HMGA2!0.67!4.62!HMGA2;;chr19:2867325..2867348,+!p1@ZNF556!0.67!3.62!ZNF556;;chr20:49547691..49547724,-!p2@ADNP!0.66!25.75!ADNP;;chr19:20188776..20188826,+!p1@ZNF90!0.66!10.75!ZNF90;;chr1:120190786..120190915,-!p1@ZNF697!0.65!29.25!ZNF697;;chr19:20011775..20011800,+!p2@ZNF93!0.65!6.75!ZNF93;;chr17:41623009..41623053,-!p4@ETV4!0.65!6.00!ETV4;;chr12:125002861..125002894,-!p7@NCOR2!0.64!5.37!NCOR2;;chr20:55204351..55204377,+!p1@TFAP2C!0.64!4.50!TFAP2C;;chr9:77112244..77112262,+!p1@RORB!0.64!3.87!RORB;;chr21:38071430..38071456,+!p1@SIM2!0.64!3.37!SIM2;;chr12:85673977..85674015,+!p1@ALX1!0.64!3.37!ALX1;;chr12:77459306..77459365,-!p1@E2F7!0.63!48.49!E2F7;;chr12:2986206..2986258,-!p2@FOXM1!0.63!23.12!FOXM1;;chr1:47779762..47779827,-!p1@STIL,p1@TAL1!0.63!17.37!TAL1;;chr6:20402102..20402152,+!p1@E2F3!0.63!15.62!E2F3;;chr8:67525443..67525459,-!p2@MYBL1!0.63!5.25!MYBL1;;chr3:71355163..71355209,-!p5@FOXP1!0.63!4.75!FOXP1;;chr19:23299814..23299844,+!p1@ZNF730!0.63!4.12!ZNF730;;chr7:27196267..27196311,-!p1@HOXA7!0.63!3.25!HOXA7;;chr14:74256787..74256858,-!p6@C14orf43!0.63!3.25!C14orf43;;chr8:80679993..80680011,-!p1@HEY1!0.62!4.87!HEY1;;chr16:54320101..54320125,-!p4@IRX3!0.62!4.75!IRX3;;chr18:55102628..55102646,+!p2@ONECUT2!0.62!3.12!ONECUT2;;chr7:63505799..63505904,+!p1@ZNF727!0.62!3.12!ZNF727;;chr7:96654026..96654061,-!p2@DLX5!0.62!3.12!DLX5;;chr2:5832493..5832507,+!p2@SOX11!0.62!3.12!SOX11;;chr13:79177703..79177729,-!p2@POU4F1!0.62!3.12!POU4F1;;chr1:50889155..50889173,-!p2@DMRTA2!0.62!3.12!DMRTA2;;chr13:73633131..73633149,+!p1@KLF5!0.61!38.99!KLF5;;chr7:148581327..148581347,-!p2@EZH2!0.61!12.25!EZH2;;chr8:67525473..67525518,-!p1@MYBL1!0.61!7.87!MYBL1;;chr1:164528687..164528711,+!p6@PBX1!0.61!3.75!PBX1;;chr17:41623667..41623682,-!p8@ETV4!0.61!3.37!ETV4;;chr6:34204921..34204939,+!p3@HMGA1!0.60!109.23!HMGA1;;chr12:2986275..2986363,-!p1@FOXM1!0.60!36.37!FOXM1;;chr7:27142290..27142310,-!p1@HOXA2!0.60!3.00!HOXA2;;chr2:172949484..172949522,+!p1@DLX1!0.60!3.00!DLX1;;chr19:11071685..11071798,+!p1@SMARCA4!0.59!98.98!SMARCA4;;chr17:41623259..41623278,-!p7@ETV4!0.59!3.50!ETV4;;chr17:46682321..46682362,-!p1@HOXB6!0.59!2.87!HOXB6;;chr18:53089453..53089482,-!p11@TCF4!0.59!2.87!TCF4;;chr19:1753498..1753519,+!p1@ONECUT3!0.59!2.87!ONECUT3;;chr2:63277948..63277974,+!p1@OTX1!0.59!2.87!OTX1;;chr3:69915385..69915438,+!p3@MITF!0.59!2.87!MITF;;chr6:10412477..10412490,-!p10@TFAP2A!0.59!2.87!TFAP2A;;chr2:101436564..101436647,+!p1@NPAS2!0.58!71.11!NPAS2;;chr7:64126503..64126528,+!p1@ZNF107!0.58!24.12!ZNF107;;chr7:64126535..64126559,+!p2@ZNF107!0.58!6.87!ZNF107;;chr18:19749517..19749531,+!p3@GATA6!0.58!5.62!GATA6;;chr15:80696703..80696754,+!p1@ARNT2!0.58!4.00!ARNT2;;chr20:50179368..50179392,-!p2@NFATC2!0.58!3.87!NFATC2;;chr19:42759266..42759290,-!p1@ERF!0.57!108.61!ERF;;chr19:20278012..20278034,+!p1@ZNF486!0.57!27.87!ZNF486;;chr19:21106049..21106072,+!p1@ZNF85!0.57!18.12!ZNF85;;chr19:20959098..20959117,+!p1@ZNF66P!0.57!13.62!ZNF66P;;chr12:27485762..27485776,+!p3@ARNTL2!0.57!8.50!ARNTL2;;chr5:150284532..150284549,-!p1@ZNF300!0.57!6.37!ZNF300;;chr19:10305581..10305646,-!p1@DNMT1!0.56!114.36!DNMT1;;chr11:47236584..47236679,+!p1@DDB2!0.56!35.99!DDB2;;chr9:4300050..4300118,-!p1@GLIS3!0.56!21.12!GLIS3;;chr17:17726907..17726958,-!p2@SREBF1!0.56!20.25!SREBF1;;chr17:56065729..56065781,-!p2@VEZF1!0.56!13.62!VEZF1;;chr20:49547593..49547611,-!p3@ADNP!0.56!10.50!ADNP;;chr17:41622925..41622976,-!p3@ETV4!0.56!4.25!ETV4;;chr2:200322654..200322707,-!p2@SATB2!0.56!4.12!SATB2;;chr2:176969124..176969155,+!p5@HOXD11!0.56!2.62!HOXD11;;chr1:3607228..3607250,+!p8@TP73!0.56!2.62!TP73;;chr11:16629261..16629284,-!p1@SOX6!0.56!2.62!SOX6;;chr13:79177674..79177701,-!p1@POU4F1!0.56!2.62!POU4F1;;chr2:60780753..60780800,-!p1@BCL11A!0.55!15.50!BCL11A;;chr12:27485823..27485868,+!p2@ARNTL2!0.55!12.62!ARNTL2;;chr18:19749541..19749557,+!p1@GATA6!0.55!9.50!GATA6;;chr2:60780607..60780624,-!p2@BCL11A!0.55!9.25!BCL11A;;chr19:21106081..21106115,+!p2@ZNF85!0.55!8.87!ZNF85;;chr8:116681409..116681431,-!p2@TRPS1!0.55!8.37!TRPS1;;chr1:935398..935465,-!p2@HES4!0.55!6.12!HES4;;chr19:21265028..21265052,+!p2@ZNF714!0.55!5.25!ZNF714;;chr7:148581360..148581425,-!p1@EZH2!0.54!15.00!EZH2;;chr19:38720294..38720348,-!p1@DPF1!0.54!3.25!DPF1;;chr3:21792790..21792824,-!p4@ZNF385D!0.54!2.50!ZNF385D;;chr16:52581025..52581072,-!p1@TOX3!0.54!2.50!TOX3;;chr19:23941680..23941704,-!p1@ZNF681!0.53!8.37!ZNF681;;chr9:4299552..4299598,-!p5@GLIS3!0.53!4.62!GLIS3;;chr3:157823517..157823562,-!p1@SHOX2!0.53!2.62!SHOX2;;chr3:147111231..147111281,+!p3@ZIC1!0.53!2.37!ZIC1;;chr6:1312155..1312187,+!p2@FOXQ1!0.53!2.37!FOXQ1;;chr1:3569072..3569093,+!p1@TP73!0.5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chr1:8763573..8763584,-!p30@RERE!0.18!0.50!RERE;;chr21:36421147..36421193,-!p10@RUNX1!0.18!0.50!RUNX1;;chr10:64133862..64133884,+!p4@ZNF365!0.18!0.50!ZNF365;;chr11:16629369..16629392,-!p5@SOX6!0.18!0.50!SOX6;;chr11:65668011..65668020,-!p3@FOSL1!0.18!0.50!FOSL1;;chr11:76092029..76092038,-!p4@PRKRIR!0.18!0.50!PRKRIR;;chr12:26278030..26278039,-!p7@BHLHE41!0.18!0.50!BHLHE41;;chr12:54394059..54394088,+!p3@HOXC9!0.18!0.50!HOXC9;;chr12:54447637..54447659,+!p4@HOXC4!0.18!0.50!HOXC4;;chr13:100634004..100634025,+!p2@ZIC2!0.18!0.50!ZIC2;;chr13:100634111..100634118,+!p8@ZIC2!0.18!0.50!ZIC2;;chr13:45010857..45010868,-!p16@TSC22D1!0.18!0.50!TSC22D1;;chr13:45150455..45150472,-!p8@TSC22D1!0.18!0.50!TSC22D1;;chr22:24093154..24093183,-!p2@ZNF70!0.18!0.50!ZNF70;;chr22:42739839..42739867,-!p1@ENST00000515426!0.18!0.50!TCF20;;chr2:172967323..172967336,-!p4@DLX2!0.18!0.50!DLX2;;chr2:185463521..185463557,+!p3@ZNF804A!0.18!0.50!ZNF804A;;chr2:45236579..45236596,-!p2@SIX2!0.18!0.50!SIX2;;chr2:60778062..60778075,-!p6@BCL11A!0.18!0.50!BCL11A;;chr2:60781201..60781258,-!p3@BCL11A!0.18!0.50!BCL11A;;chr2:63277927..63277938,+!p3@OTX1!0.18!0.50!OTX1;;chr2:66662396..66662407,+!p4@MEIS1!0.18!0.50!MEIS1;;chr2:97203110..97203159,+!p4@ARID5A!0.18!0.50!ARID5A;;chr3:168864936..168864953,-!p8@MECOM!0.18!0.50!MECOM;;chr3:169381166..169381181,-!p13@MECOM!0.18!0.50!MECOM;;chr3:181429641..181429650,+!p3@SOX2!0.18!0.50!SOX2;;chr3:189526110..189526125,+!p8@TP63!0.18!0.50!TP63;;chr3:69811858..69811881,+!p5@MITF!0.18!0.50!MITF;;chr3:69811882..69811898,+!p6@MITF!0.18!0.50!MITF;;chr3:69915369..69915381,+!p4@MITF!0.18!0.50!MITF;;chr3:71355138..71355149,-!p41@FOXP1!0.18!0.50!FOXP1;;chr4:149363494..149363543,-!p1@NR3C2!0.18!0.50!NR3C2;;chr5:133450458..133450469,+!p4@TCF7!0.18!0.50!TCF7;;chr5:134369683..134369708,-!p7@PITX1!0.18!0.50!PITX1;;chr5:134369848..134369853,-!p6@PITX1!0.18!0.50!PITX1;;chr5:137800912..137800941,+!p7@EGR1!0.18!0.50!EGR1;;chr5:138643069..138643082,+!p13@MATR3!0.18!0.50!MATR3;;chr6:21597687..21597708,+!p14@SOX4!0.18!0.50!SOX4;;chr7:138665915..138665946,-!p3@KIAA1549!0.18!0.50!KIAA1549;;chr7:27170359..27170381,-!p1@HOXA4!0.18!0.50!HOXA4;;chr7:27195867..27195893,-!p3@HOXA7!0.18!0.50!HOXA7;;chr7:96634878..96634900,+!p2@DLX6!0.18!0.50!DLX6;;chr8:28748961..28748996,+!p6@HMBOX1!0.18!0.50!HMBOX1;;chr8:86089472..86089483,+!p9@E2F5!0.18!0.50!E2F5;;chr9:115819058..115819082,-!p2@ZFP37!0.18!0.50!ZFP37;;chr9:124976328..124976372,-!p2@LHX6!0.18!0.50!LHX6;;chr9:4299638..4299651,-!p8@GLIS3!0.18!0.50!GLIS3;;chrX:47863414..47863425,-!p3@ZNF182!0.18!0.50!ZNF182;;chr1:8938736..8938756,-!p1@ENO1!0.17!1474.39!ENO1;;chr9:86595503..86595550,-!p2@HNRNPK!0.17!213.59!HNRPK;;chr11:65686855..65686946,+!p1@DRAP1!0.17!101.23!DRAP1;;chr17:7590797..7590815,-!p1@TP53!0.17!57.99!TP53;;chr19:52873166..52873208,+!p1@ZNF880!0.17!18.00!ZNF880;;chr7:77428149..77428220,+!p1@PHTF2!0.17!12.87!PHTF2;;chr7:64838754..64838778,+!p1@ZNF92!0.17!12.25!ZNF92;;chr11:64072981..64073005,+!p2@ESRRA!0.17!8.37!ESRRA;;chr19:9434841..9434886,+!p1@ZNF559!0.17!6.00!ZNF559;;chr16:30546141..30546240,-!p1@ZNF747,p2@ZNF768!0.17!4.62!ZNF747;;chr19:38210622..38210681,-!p1@ZNF607!0.17!4.25!ZNF607;;chr1:205600919..205600982,-!p3@ELK4!0.17!4.12!ELK4;;chr7:99156314..99156372,+!p4@ZNF655!0.17!3.62!ZNF655;;chr21:27107726..27107772,+!p4@GABPA!0.17!3.50!GABPA;;chr6:109804367..109804402,-!p2@ZBTB24!0.17!3.12!ZBTB24;;chr11:64073006..64073017,+!p3@ESRRA!0.17!2.25!ESRRA;;chr17:38256932..38256965,-!p4@NR1D1!0.17!2.12!NR1D1;;chr12:133706820..133706881,-!p1@ZNF891!0.17!2.00!ZNF891;;
+|ffid_belonging_in_development=CL:0000133,CL:0000339,CL:0000221,UBERON:0002532,UBERON:0006601,UBERON:0006238,UBERON:0010316
 |fonse_cell_line=FF:0100255
 |fonse_cell_line_closure=FF:0100255

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FF:10759-110E3: Difference between revisions

From FANTOM5_SSTAR

Revision as of 19:48, 9 July 2012

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0