FFCP PHASE1:Hg19::chr5:87974286..87974293,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000128!1.78e-16!7;CL:0000126!1.78e-16!7;CL:0000127!1.78e-16!7;CL:0002453!1.78e-16!7;CL:0002319!5.35e-15!25;CL:0000047!1.26e-14!8;CL:0002605!8.05e-11!3;CL:0002603!2.98e-10!3;CL:0000540!4.35e-09!6;CL:0000031!4.35e-09!6;CL:0000404!4.35e-09!6 | |ontology_enrichment_celltype=CL:0000128!1.78e-16!7;CL:0000126!1.78e-16!7;CL:0000127!1.78e-16!7;CL:0002453!1.78e-16!7;CL:0002319!5.35e-15!25;CL:0000047!1.26e-14!8;CL:0002605!8.05e-11!3;CL:0002603!2.98e-10!3;CL:0000540!4.35e-09!6;CL:0000031!4.35e-09!6;CL:0000404!4.35e-09!6 | ||
|ontology_enrichment_celltype_v019=CL:0002605;8.35e-29;3!CL:0002319;4.38e-27;25!CL:0000128;1.06e-21;7!CL:0000126;1.06e-21;7!CL:0000127;1.06e-21;7!CL:0000047;4.66e-20;2!CL:0000540;7.05e-15;6!CL:0000404;7.05e-15;6!CL:0000243;4.47e-09;15!CL:0000125;4.47e-09;15!CL:0000095;3.87e-08;17 | |ontology_enrichment_celltype_v019=CL:0002605;8.35e-29;3!CL:0002319;4.38e-27;25!CL:0000128;1.06e-21;7!CL:0000126;1.06e-21;7!CL:0000127;1.06e-21;7!CL:0000047;4.66e-20;2!CL:0000540;7.05e-15;6!CL:0000404;7.05e-15;6!CL:0000243;4.47e-09;15!CL:0000125;4.47e-09;15!CL:0000095;3.87e-08;17 | ||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.36e-29,8;CL:0002605,1.11e-28,3;CL:0002319,5.72e-27,25;CL:0000128,1.63e-21,7;CL:0000126,1.63e-21,7;CL:0000127,1.63e-21,7;CL:0002453,1.63e-21,7;CL:0000540,6.12e-15,6;CL:0000031,6.12e-15,6;CL:0000404,6.12e-15,6;CL:0000133,2.78e-11,59;CL:0000221,4.38e-09,72;CL:0000243,5.30e-09,15;CL:0000125,5.30e-09,15;CL:0000030,5.30e-09,15;CL:0000339,5.30e-09,15;CL:0000095,4.51e-08,17;CL:0000123,4.51e-08,17 | |||
|ontology_enrichment_development_v019=CL:0000031;7.05e-15;6!CL:0000339;4.47e-09;15!CL:0000133;8.85e-08;59 | |ontology_enrichment_development_v019=CL:0000031;7.05e-15;6!CL:0000339;4.47e-09;15!CL:0000133;8.85e-08;59 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.17e-62!82;UBERON:0005743!2.70e-59!86;UBERON:0001049!6.00e-54!57;UBERON:0005068!6.00e-54!57;UBERON:0006241!6.00e-54!57;UBERON:0007135!6.00e-54!57;UBERON:0001869!2.47e-53!32;UBERON:0000073!9.64e-53!94;UBERON:0001016!9.64e-53!94;UBERON:0002616!1.51e-51!59;UBERON:0002020!4.46e-50!34;UBERON:0003528!4.46e-50!34;UBERON:0001893!6.92e-50!34;UBERON:0000955!3.02e-48!69;UBERON:0006238!3.02e-48!69;UBERON:0002791!1.91e-47!33;UBERON:0002780!5.67e-44!41;UBERON:0001890!5.67e-44!41;UBERON:0006240!5.67e-44!41;UBERON:0000956!1.31e-43!25;UBERON:0000203!1.31e-43!25;UBERON:0003080!8.80e-43!42;UBERON:0002346!2.61e-42!90;UBERON:0003075!1.41e-37!86;UBERON:0007284!1.41e-37!86;UBERON:0002619!4.10e-35!22;UBERON:0003056!5.73e-30!61;UBERON:0001950!7.37e-30!20;UBERON:0000924!7.77e-30!173;UBERON:0006601!7.77e-30!173;UBERON:0000033!1.56e-26!123;UBERON:0004121!2.31e-26!169;UBERON:0000153!7.22e-25!129;UBERON:0007811!7.22e-25!129;UBERON:0002680!5.46e-16!9;UBERON:0001895!5.46e-16!9;UBERON:0010092!5.46e-16!9;UBERON:0001871!1.56e-13!7;UBERON:0007023!1.64e-13!115;UBERON:0000369!4.30e-13!4;UBERON:0002435!4.30e-13!4;UBERON:0000204!4.30e-13!4;UBERON:0010082!4.30e-13!4;UBERON:0002037!5.70e-13!6;UBERON:0006215!5.70e-13!6;UBERON:0003076!4.86e-12!15;UBERON:0003057!4.86e-12!15;UBERON:0004733!9.90e-12!12;UBERON:0002028!9.90e-12!12;UBERON:0007277!9.90e-12!12;UBERON:0004732!9.51e-11!13;UBERON:0000025!1.02e-10!194;UBERON:0002021!2.32e-10!5;UBERON:0005383!2.47e-10!3;UBERON:0005382!2.47e-10!3;UBERON:0000349!2.82e-10!5;UBERON:0002771!6.49e-10!3;UBERON:0002308!1.13e-08!9;UBERON:0000125!1.13e-08!9;UBERON:0002420!1.34e-08!9;UBERON:0007245!1.34e-08!9;UBERON:0010009!1.34e-08!9;UBERON:0010011!1.34e-08!9;UBERON:0000454!1.34e-08!9;UBERON:0000200!2.53e-08!6;UBERON:0000064!6.57e-08!219;UBERON:0001873!1.56e-07!2;UBERON:0010122!1.56e-07!2;UBERON:0009663!1.76e-07!7;UBERON:0001954!2.22e-07!2;UBERON:0003022!2.22e-07!2;UBERON:0002421!2.22e-07!2;UBERON:0002600!2.22e-07!2;UBERON:0004111!4.56e-07!241 | |ontology_enrichment_uberon=UBERON:0001017!1.17e-62!82;UBERON:0005743!2.70e-59!86;UBERON:0001049!6.00e-54!57;UBERON:0005068!6.00e-54!57;UBERON:0006241!6.00e-54!57;UBERON:0007135!6.00e-54!57;UBERON:0001869!2.47e-53!32;UBERON:0000073!9.64e-53!94;UBERON:0001016!9.64e-53!94;UBERON:0002616!1.51e-51!59;UBERON:0002020!4.46e-50!34;UBERON:0003528!4.46e-50!34;UBERON:0001893!6.92e-50!34;UBERON:0000955!3.02e-48!69;UBERON:0006238!3.02e-48!69;UBERON:0002791!1.91e-47!33;UBERON:0002780!5.67e-44!41;UBERON:0001890!5.67e-44!41;UBERON:0006240!5.67e-44!41;UBERON:0000956!1.31e-43!25;UBERON:0000203!1.31e-43!25;UBERON:0003080!8.80e-43!42;UBERON:0002346!2.61e-42!90;UBERON:0003075!1.41e-37!86;UBERON:0007284!1.41e-37!86;UBERON:0002619!4.10e-35!22;UBERON:0003056!5.73e-30!61;UBERON:0001950!7.37e-30!20;UBERON:0000924!7.77e-30!173;UBERON:0006601!7.77e-30!173;UBERON:0000033!1.56e-26!123;UBERON:0004121!2.31e-26!169;UBERON:0000153!7.22e-25!129;UBERON:0007811!7.22e-25!129;UBERON:0002680!5.46e-16!9;UBERON:0001895!5.46e-16!9;UBERON:0010092!5.46e-16!9;UBERON:0001871!1.56e-13!7;UBERON:0007023!1.64e-13!115;UBERON:0000369!4.30e-13!4;UBERON:0002435!4.30e-13!4;UBERON:0000204!4.30e-13!4;UBERON:0010082!4.30e-13!4;UBERON:0002037!5.70e-13!6;UBERON:0006215!5.70e-13!6;UBERON:0003076!4.86e-12!15;UBERON:0003057!4.86e-12!15;UBERON:0004733!9.90e-12!12;UBERON:0002028!9.90e-12!12;UBERON:0007277!9.90e-12!12;UBERON:0004732!9.51e-11!13;UBERON:0000025!1.02e-10!194;UBERON:0002021!2.32e-10!5;UBERON:0005383!2.47e-10!3;UBERON:0005382!2.47e-10!3;UBERON:0000349!2.82e-10!5;UBERON:0002771!6.49e-10!3;UBERON:0002308!1.13e-08!9;UBERON:0000125!1.13e-08!9;UBERON:0002420!1.34e-08!9;UBERON:0007245!1.34e-08!9;UBERON:0010009!1.34e-08!9;UBERON:0010011!1.34e-08!9;UBERON:0000454!1.34e-08!9;UBERON:0000200!2.53e-08!6;UBERON:0000064!6.57e-08!219;UBERON:0001873!1.56e-07!2;UBERON:0010122!1.56e-07!2;UBERON:0009663!1.76e-07!7;UBERON:0001954!2.22e-07!2;UBERON:0003022!2.22e-07!2;UBERON:0002421!2.22e-07!2;UBERON:0002600!2.22e-07!2;UBERON:0004111!4.56e-07!241 | ||
|ontology_enrichment_uberon_v019=UBERON:0000956;2.38e-17;25!UBERON:0000203;2.38e-17;25!UBERON:0002791;4.53e-13;32!UBERON:0001869;5.28e-13;32!UBERON:0003528;2.63e-12;34!UBERON:0002020;2.63e-12;34!UBERON:0001893;3.93e-11;34!UBERON:0001016;6.69e-10;83!UBERON:0000955;8.38e-10;68!UBERON:0001017;3.88e-09;75!UBERON:0002780;6.78e-09;41!UBERON:0001890;6.78e-09;41!UBERON:0000073;1.28e-08;53!UBERON:0002616;1.28e-08;53!UBERON:0002037;3.80e-07;6!UBERON:0002619;5.86e-07;22 | |ontology_enrichment_uberon_v019=UBERON:0000956;2.38e-17;25!UBERON:0000203;2.38e-17;25!UBERON:0002791;4.53e-13;32!UBERON:0001869;5.28e-13;32!UBERON:0003528;2.63e-12;34!UBERON:0002020;2.63e-12;34!UBERON:0001893;3.93e-11;34!UBERON:0001016;6.69e-10;83!UBERON:0000955;8.38e-10;68!UBERON:0001017;3.88e-09;75!UBERON:0002780;6.78e-09;41!UBERON:0001890;6.78e-09;41!UBERON:0000073;1.28e-08;53!UBERON:0002616;1.28e-08;53!UBERON:0002037;3.80e-07;6!UBERON:0002619;5.86e-07;22 | ||
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| ||
|short_description=p13@LINC00461 | |short_description=p13@LINC00461 | ||
}} | }} |
Revision as of 03:57, 18 November 2012
Short description: | p13@LINC00461 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_13_at_LINC00461_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | -21bp_to_ENST00000513026_5end |
EntrezGene: | NA |
HGNC: | 42810 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.36e-29 | 8 |
astrocyte of the cerebral cortex | 1.11e-28 | 3 |
neural cell | 5.72e-27 | 25 |
oligodendrocyte | 1.63e-21 | 7 |
macroglial cell | 1.63e-21 | 7 |
astrocyte | 1.63e-21 | 7 |
oligodendrocyte precursor cell | 1.63e-21 | 7 |
neuron | 6.12e-15 | 6 |
neuroblast | 6.12e-15 | 6 |
electrically signaling cell | 6.12e-15 | 6 |
neurectodermal cell | 2.78e-11 | 59 |
ectodermal cell | 4.38e-09 | 72 |
glial cell (sensu Vertebrata) | 5.30e-09 | 15 |
glial cell | 5.30e-09 | 15 |
glioblast | 5.30e-09 | 15 |
glioblast (sensu Vertebrata) | 5.30e-09 | 15 |
neuron associated cell | 4.51e-08 | 17 |
neuron associated cell (sensu Vertebrata) | 4.51e-08 | 17 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 2.25e-30 | 81 |
nervous system | 3.72e-27 | 89 |
cerebral cortex | 2.39e-17 | 25 |
pallium | 2.39e-17 | 25 |
neural tube | 3.96e-15 | 56 |
neural rod | 3.96e-15 | 56 |
future spinal cord | 3.96e-15 | 56 |
neural keel | 3.96e-15 | 56 |
brain | 9.19e-15 | 68 |
future brain | 9.19e-15 | 68 |
regional part of telencephalon | 1.59e-13 | 32 |
cerebral hemisphere | 1.59e-13 | 32 |
ectoderm-derived structure | 4.05e-13 | 171 |
ectoderm | 4.05e-13 | 171 |
presumptive ectoderm | 4.05e-13 | 171 |
regional part of nervous system | 5.10e-13 | 53 |
regional part of brain | 5.10e-13 | 53 |
brain grey matter | 1.03e-12 | 34 |
gray matter | 1.03e-12 | 34 |
telencephalon | 1.03e-12 | 34 |
organ system subdivision | 2.61e-12 | 223 |
regional part of forebrain | 1.78e-10 | 41 |
forebrain | 1.78e-10 | 41 |
anterior neural tube | 1.78e-10 | 41 |
future forebrain | 1.78e-10 | 41 |
neural plate | 6.19e-10 | 82 |
presumptive neural plate | 6.19e-10 | 82 |
neurectoderm | 2.07e-09 | 86 |
ecto-epithelium | 1.52e-07 | 104 |
cerebellum | 4.30e-07 | 6 |
rhombic lip | 4.30e-07 | 6 |
regional part of cerebral cortex | 5.59e-07 | 22 |
pre-chordal neural plate | 7.37e-07 | 61 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.