FFCP PHASE1:Hg19::chr17:46692318..46692362,-: Difference between revisions
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|ontology_enrichment_celltype=CL:1000449!9.67e-15!16;CL:1000497!1.29e-14!18;CL:0002518!1.29e-14!18;CL:1000507!2.49e-13!12;CL:1000494!2.49e-13!12;CL:0002681!1.34e-11!13;CL:0002584!1.34e-11!13;CL:0000066!2.30e-07!254 | |ontology_enrichment_celltype=CL:1000449!9.67e-15!16;CL:1000497!1.29e-14!18;CL:0002518!1.29e-14!18;CL:1000507!2.49e-13!12;CL:1000494!2.49e-13!12;CL:0002681!1.34e-11!13;CL:0002584!1.34e-11!13;CL:0000066!2.30e-07!254 | ||
|ontology_enrichment_celltype_v019=CL:1000497;2.64e-23;17!CL:0002518;2.64e-23;17!CL:1000449;1.01e-22;15!CL:1000507;7.79e-20;10!CL:1000494;7.79e-20;10!CL:0002681;4.06e-16;12!CL:0002584;4.06e-16;12!CL:1000746;4.28e-09;7!CL:1000612;4.28e-09;7!CL:0000239;1.37e-08;3!CL:1000615;1.37e-08;3!CL:0002306;1.37e-08;3!CL:0002564;6.09e-08;3!CL:0002579;8.39e-08;3 | |ontology_enrichment_celltype_v019=CL:1000497;2.64e-23;17!CL:0002518;2.64e-23;17!CL:1000449;1.01e-22;15!CL:1000507;7.79e-20;10!CL:1000494;7.79e-20;10!CL:0002681;4.06e-16;12!CL:0002584;4.06e-16;12!CL:1000746;4.28e-09;7!CL:1000612;4.28e-09;7!CL:0000239;1.37e-08;3!CL:1000615;1.37e-08;3!CL:0002306;1.37e-08;3!CL:0002564;6.09e-08;3!CL:0002579;8.39e-08;3 | ||
|ontology_enrichment_celltype_v019_2=CL:1000497,3.31e-23,17;CL:0002518,3.31e-23,17;CL:1000449,1.41e-22,15;CL:1000507,1.02e-19,10;CL:1000494,1.02e-19,10;CL:0002681,5.39e-16,12;CL:0002584,5.39e-16,12;CL:1000746,4.86e-09,7;CL:1000612,4.86e-09,7;CL:0000239,1.65e-08,3;CL:1000615,1.65e-08,3;CL:0002306,1.65e-08,3;CL:0002564,7.63e-08,3;CL:0002579,9.73e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0006241;1.59e-09;3!UBERON:0003057;1.59e-09;3 | |ontology_enrichment_development_v019=UBERON:0006241;1.59e-09;3!UBERON:0003057;1.59e-09;3 | ||
|ontology_enrichment_disease=DOID:0050687!9.53e-10!143;DOID:14566!1.65e-08!239;DOID:162!3.63e-08!235;DOID:305!1.03e-07!106 | |ontology_enrichment_disease=DOID:0050687!9.53e-10!143;DOID:14566!1.65e-08!239;DOID:162!3.63e-08!235;DOID:305!1.03e-07!106 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000489!1.60e-20!32;UBERON:0000080!7.04e-17!18;UBERON:0002120!7.04e-17!18;UBERON:0004875!7.04e-17!18;UBERON:0005721!7.04e-17!18;UBERON:0005754!7.04e-17!18;UBERON:0007297!7.04e-17!18;UBERON:0002113!2.38e-16!27;UBERON:0003918!2.38e-16!27;UBERON:0005095!2.38e-16!27;UBERON:0007687!2.38e-16!27;UBERON:0006555!9.37e-16!17;UBERON:0005103!9.37e-16!17;UBERON:0000083!9.37e-16!17;UBERON:0009201!9.37e-16!17;UBERON:0004819!9.37e-16!17;UBERON:0006553!9.37e-16!17;UBERON:0003074!9.37e-16!17;UBERON:0003060!9.37e-16!17;UBERON:0003887!7.11e-15!21;UBERON:0003886!7.38e-15!63;UBERON:0004211!9.67e-15!16;UBERON:0001285!9.67e-15!16;UBERON:0007684!9.67e-15!16;UBERON:0003220!9.67e-15!16;UBERON:0004208!9.67e-15!16;UBERON:0004876!1.47e-14!20;UBERON:0000058!1.78e-14!26;UBERON:0006554!2.43e-13!44;UBERON:0009773!2.49e-13!12;UBERON:0001231!2.49e-13!12;UBERON:0004810!2.49e-13!12;UBERON:0001008!7.84e-13!45;UBERON:0002553!3.76e-12!70;UBERON:0002417!3.98e-12!61;UBERON:0000916!3.98e-12!61;UBERON:0005177!5.49e-12!107;UBERON:0001225!1.34e-11!13;UBERON:0008987!1.34e-11!13;UBERON:0000464!6.66e-11!104;UBERON:0001851!5.74e-10!16;UBERON:0003064!5.14e-09!37;UBERON:0009569!5.38e-09!113;UBERON:0005172!1.27e-08!55;UBERON:0005173!1.27e-08!55;UBERON:0000466!2.16e-08!126;UBERON:0001473!3.46e-08!8;UBERON:0004536!3.46e-08!8;UBERON:0006558!3.46e-08!8;UBERON:0000353!5.73e-08!17;UBERON:0005174!5.56e-07!5;UBERON:0001137!5.56e-07!5 | |ontology_enrichment_uberon=UBERON:0000489!1.60e-20!32;UBERON:0000080!7.04e-17!18;UBERON:0002120!7.04e-17!18;UBERON:0004875!7.04e-17!18;UBERON:0005721!7.04e-17!18;UBERON:0005754!7.04e-17!18;UBERON:0007297!7.04e-17!18;UBERON:0002113!2.38e-16!27;UBERON:0003918!2.38e-16!27;UBERON:0005095!2.38e-16!27;UBERON:0007687!2.38e-16!27;UBERON:0006555!9.37e-16!17;UBERON:0005103!9.37e-16!17;UBERON:0000083!9.37e-16!17;UBERON:0009201!9.37e-16!17;UBERON:0004819!9.37e-16!17;UBERON:0006553!9.37e-16!17;UBERON:0003074!9.37e-16!17;UBERON:0003060!9.37e-16!17;UBERON:0003887!7.11e-15!21;UBERON:0003886!7.38e-15!63;UBERON:0004211!9.67e-15!16;UBERON:0001285!9.67e-15!16;UBERON:0007684!9.67e-15!16;UBERON:0003220!9.67e-15!16;UBERON:0004208!9.67e-15!16;UBERON:0004876!1.47e-14!20;UBERON:0000058!1.78e-14!26;UBERON:0006554!2.43e-13!44;UBERON:0009773!2.49e-13!12;UBERON:0001231!2.49e-13!12;UBERON:0004810!2.49e-13!12;UBERON:0001008!7.84e-13!45;UBERON:0002553!3.76e-12!70;UBERON:0002417!3.98e-12!61;UBERON:0000916!3.98e-12!61;UBERON:0005177!5.49e-12!107;UBERON:0001225!1.34e-11!13;UBERON:0008987!1.34e-11!13;UBERON:0000464!6.66e-11!104;UBERON:0001851!5.74e-10!16;UBERON:0003064!5.14e-09!37;UBERON:0009569!5.38e-09!113;UBERON:0005172!1.27e-08!55;UBERON:0005173!1.27e-08!55;UBERON:0000466!2.16e-08!126;UBERON:0001473!3.46e-08!8;UBERON:0004536!3.46e-08!8;UBERON:0006558!3.46e-08!8;UBERON:0000353!5.73e-08!17;UBERON:0005174!5.56e-07!5;UBERON:0001137!5.56e-07!5 | ||
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| ||
|short_description=p5@HOXB8 | |short_description=p5@HOXB8 | ||
}} | }} |
Revision as of 08:16, 19 November 2012
Short description: | p5@HOXB8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_HOXB8_5end |
Coexpression cluster: | C3646_spinal_alveolar_glioblastoma_somatostatinoma_Endothelial_rhabdomyosarcoma_nonsmall |
Association with transcript: | -17bp_to_NM_024016, uc002inw.2_5end |
EntrezGene: | HOXB8 |
HGNC: | 5119 |
UniProt: | P17481Q8N8T3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney cell | 3.31e-23 | 17 |
kidney epithelial cell | 3.31e-23 | 17 |
epithelial cell of nephron | 1.41e-22 | 15 |
kidney tubule cell | 1.02e-19 | 10 |
nephron tubule epithelial cell | 1.02e-19 | 10 |
kidney cortical cell | 5.39e-16 | 12 |
renal cortical epithelial cell | 5.39e-16 | 12 |
glomerular cell | 4.86e-09 | 7 |
kidney corpuscule cell | 4.86e-09 | 7 |
brush border epithelial cell | 1.65e-08 | 3 |
kidney cortex tubule cell | 1.65e-08 | 3 |
epithelial cell of proximal tubule | 1.65e-08 | 3 |
nucleus pulposus cell of intervertebral disc | 7.63e-08 | 3 |
omentum preadipocyte | 9.73e-08 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.