FFCP PHASE1:Mm9::chr14:84844821..84844839,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|id=chr14:84844821..84844839,+ | |id=chr14:84844821..84844839,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.20e-07,23;CL:0000337,1.20e-07,23;CL:0002612,3.73e-07,3;CL:0000540,7.71e-07,33;CL:0000047,7.71e-07,33;CL:0000031,7.71e-07,33;CL:0000404,7.71e-07,33 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002048!1.63e-09!14;UBERON:0000117!1.63e-09!14;UBERON:0000171!1.63e-09!14;UBERON:0000170!1.63e-09!14;UBERON:0005597!1.63e-09!14;UBERON:0000118!1.63e-09!14;UBERON:0000468!4.83e-08!333;UBERON:0005177!1.64e-07!85;UBERON:0005153!4.04e-07!17;UBERON:0000025!6.56e-07!114 | |ontology_enrichment_uberon=UBERON:0002048!1.63e-09!14;UBERON:0000117!1.63e-09!14;UBERON:0000171!1.63e-09!14;UBERON:0000170!1.63e-09!14;UBERON:0005597!1.63e-09!14;UBERON:0000118!1.63e-09!14;UBERON:0000468!4.83e-08!333;UBERON:0005177!1.64e-07!85;UBERON:0005153!4.04e-07!17;UBERON:0000025!6.56e-07!114 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002048,1.60e-17,14;UBERON:0000117,1.60e-17,14;UBERON:0000171,1.60e-17,14;UBERON:0000170,1.60e-17,14;UBERON:0005597,1.60e-17,14;UBERON:0000118,1.60e-17,14;UBERON:0005153,6.26e-14,17;UBERON:0005178,6.26e-14,17;UBERON:0005181,6.26e-14,17;UBERON:0002224,6.26e-14,17;UBERON:0000915,6.26e-14,17;UBERON:0008947,6.26e-14,17;UBERON:0003258,6.26e-14,17;UBERON:0005157,2.01e-11,20;UBERON:0002020,3.31e-10,34;UBERON:0000025,1.85e-09,114;UBERON:0004111,2.40e-08,122;UBERON:0001017,7.90e-08,73;UBERON:0001016,1.76e-07,75;UBERON:0001049,2.87e-07,52;UBERON:0005068,2.87e-07,52;UBERON:0006241,2.87e-07,52;UBERON:0007135,2.87e-07,52;UBERON:0002420,3.27e-07,8;UBERON:0007245,3.27e-07,8;UBERON:0010009,3.27e-07,8;UBERON:0010011,3.27e-07,8;UBERON:0000454,3.27e-07,8;UBERON:0001948,3.32e-07,5;UBERON:0002315,3.32e-07,5;UBERON:0002257,3.73e-07,3;UBERON:0000073,7.51e-07,54 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0.202475267389826,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,1.01158230429799,1.05798195854407,0.633831403506179,0,0,0,0,0,0,0,0.103689612308478,0,0.210324961351382,2.28520787523043,0.662605622854841,0.122490799214954,0.191690942036473,0,0,0.638436690425939,0.768032666281217,1.58263545276233,1.00636407962651,1.04182674111352,1.3959149950069,0,1.22238598221448,2.94628585473668,1.70846016958924,2.05039390407831,0.605809546665472,0.377857800533928,2.6087803983151,0,0,0,0.649776417447669,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,1.03575153458869,0.890652834388949,0.173485326766136,0.304465478312141,0.922461989024234,0,1.29347577849275,0.879666139307728,0,0.144599356919912,0,0.161766849947409,0,0.969750506270444,0,0,0.41889341362691,0,0,0,0,1.64769703345305,0.915001205637253,1.00523481690292,1.39059456153821,0.767146371990992,0.83115217823824,0.324482526135515,0.305518091550949,0.248813941220186,0.252722758433675,0,0.260240885925407,0.229902104433473,0,0.452114453507145,0.340182495756639,0.512454881139399,0.374806898238915,0.776110112217047,0,0,0.175951124163949,0.43839146485515,0.278047249225598,0.348252166522167,0.61734640922383,0,0,0,0,0,0.234526059981096,0,0.23674473558521,0.393528463494808,0.154267112887378,0.465067889500816,0.536546802799238,0.233530684734339,0.16455984991348,1.47750717671186,0.405344047729279,0.584799949701329,0.439100230582101,0.268412837520744,1.26173969138476,1.23485534855141,0,0,0.213288250535234,0.232236671860439,0.257734922644187,0.403367049246685,0.889512175379481,0.380451252225118,0,0,0,0.198956472041151,0.19496408711912,0,0,0.199141273254367,0.379335801906163,0.799739588268102,1.1270773567308,0.814605311381257,0.775809948670503,0.420814919341911,1.51767689098217,1.47610147979602,0.31399745568275,0.493588655687202,0,0,0,0.224862112384854,0,0,0.25462585178142,0.863088412352432,0.648540907100142,0.274561413188081,0,0.372140947668503,0.624075346229121,0.252578877947112,0,0.482443521363367,0.923765950833023,0.37898282354097,0.488894929326078,2.03694102930226,1.87752198630802,4.69017520837084,10.9500074807566,2.14647012643579,4.25614889086716,7.75126413770712,6.37819074629948,4.7520361267564,1.72684981865896,3.32692834737477,0,0,0,0,0.80275294993896,0.703270119553219,0,0.252470927204373,0,0,0.430846795465598,1.43381278771531,0.668396022247182,1.69845918473299,0.404810701674894,0.876767573733936,0.790575555893047,1.60660658210904,0.425820255624806,0.534196811001766,0.162886959353576,0,0,0.242780636154981,0,0.377210159511796,0.590603785761546,0.922305443831782,0.775284879504663,0,0.712994756769443,0.632073515871632,0,0,0.680879211507576,0.18006109403131,0,0.214337035031592,1.06404140185364,0.535106452806212,0.822745103010605,0.304464949114599,0.469343416127421,0.21183207086382,0.220528398054962,0,0,0.0603129249281559,0,0,0.291480836629851,0.927126510052548,0.170870880797853,1.44470807574256,1.66675074632741,0.565105371014073,0,0,0,0,0,0,0.158167996790568,0.406638934253697,0.86404272657441,0,0.218362563746178,0.539457385539283,0.165306911450672,0.785267825952089,0.129614973291793,0,0,0.448549638131936,0.165458490457098,0.194451188344048,0.129159823477731,0,0,0,0,0,0,0,0,0.308132871494482,0,0.179026695667481,0,0,0,0.100966449948148,0.15241361331,0,0.0974578807397524,0,0,0,0,0,0,0,0.375364950902364,0.36630324853453,0.214368379079066,0,1.12950368523413,1.38097570952153,0,0.171853182343688,0,0,1.35004500046361,0,0.453142408984205,0,0.103787347584177,0,0.170733605754134,0.729320151204882,0.209613162627982,0.183843508450014,0.222246727801615,0.618105171716683,0,1.51618327058278,0.25347929989024,0.754505365544305,0.468207537349412,0.448176066834085,0.631790158511746,1.42888107384922,0.811190281613988,0.77163688185482,0.824171801606613,1.47198920134397,0,0.532427418478012,0.715308569841963,0.581385666529314,0.658765662907314,0.761531471025089,0.914639864363863,1.05227884575137,1.08643291076689,0.561142271657738,0.474540072496697,0.591026894253381,0,0,0.964533054905707,0.749431733813838,0.701794825336225,0.214871054048298,0.57386499620653,0.661774257358546,0.927471342481686 | |phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0.202475267389826,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,1.01158230429799,1.05798195854407,0.633831403506179,0,0,0,0,0,0,0,0.103689612308478,0,0.210324961351382,2.28520787523043,0.662605622854841,0.122490799214954,0.191690942036473,0,0,0.638436690425939,0.768032666281217,1.58263545276233,1.00636407962651,1.04182674111352,1.3959149950069,0,1.22238598221448,2.94628585473668,1.70846016958924,2.05039390407831,0.605809546665472,0.377857800533928,2.6087803983151,0,0,0,0.649776417447669,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,1.03575153458869,0.890652834388949,0.173485326766136,0.304465478312141,0.922461989024234,0,1.29347577849275,0.879666139307728,0,0.144599356919912,0,0.161766849947409,0,0.969750506270444,0,0,0.41889341362691,0,0,0,0,1.64769703345305,0.915001205637253,1.00523481690292,1.39059456153821,0.767146371990992,0.83115217823824,0.324482526135515,0.305518091550949,0.248813941220186,0.252722758433675,0,0.260240885925407,0.229902104433473,0,0.452114453507145,0.340182495756639,0.512454881139399,0.374806898238915,0.776110112217047,0,0,0.175951124163949,0.43839146485515,0.278047249225598,0.348252166522167,0.61734640922383,0,0,0,0,0,0.234526059981096,0,0.23674473558521,0.393528463494808,0.154267112887378,0.465067889500816,0.536546802799238,0.233530684734339,0.16455984991348,1.47750717671186,0.405344047729279,0.584799949701329,0.439100230582101,0.268412837520744,1.26173969138476,1.23485534855141,0,0,0.213288250535234,0.232236671860439,0.257734922644187,0.403367049246685,0.889512175379481,0.380451252225118,0,0,0,0.198956472041151,0.19496408711912,0,0,0.199141273254367,0.379335801906163,0.799739588268102,1.1270773567308,0.814605311381257,0.775809948670503,0.420814919341911,1.51767689098217,1.47610147979602,0.31399745568275,0.493588655687202,0,0,0,0.224862112384854,0,0,0.25462585178142,0.863088412352432,0.648540907100142,0.274561413188081,0,0.372140947668503,0.624075346229121,0.252578877947112,0,0.482443521363367,0.923765950833023,0.37898282354097,0.488894929326078,2.03694102930226,1.87752198630802,4.69017520837084,10.9500074807566,2.14647012643579,4.25614889086716,7.75126413770712,6.37819074629948,4.7520361267564,1.72684981865896,3.32692834737477,0,0,0,0,0.80275294993896,0.703270119553219,0,0.252470927204373,0,0,0.430846795465598,1.43381278771531,0.668396022247182,1.69845918473299,0.404810701674894,0.876767573733936,0.790575555893047,1.60660658210904,0.425820255624806,0.534196811001766,0.162886959353576,0,0,0.242780636154981,0,0.377210159511796,0.590603785761546,0.922305443831782,0.775284879504663,0,0.712994756769443,0.632073515871632,0,0,0.680879211507576,0.18006109403131,0,0.214337035031592,1.06404140185364,0.535106452806212,0.822745103010605,0.304464949114599,0.469343416127421,0.21183207086382,0.220528398054962,0,0,0.0603129249281559,0,0,0.291480836629851,0.927126510052548,0.170870880797853,1.44470807574256,1.66675074632741,0.565105371014073,0,0,0,0,0,0,0.158167996790568,0.406638934253697,0.86404272657441,0,0.218362563746178,0.539457385539283,0.165306911450672,0.785267825952089,0.129614973291793,0,0,0.448549638131936,0.165458490457098,0.194451188344048,0.129159823477731,0,0,0,0,0,0,0,0,0.308132871494482,0,0.179026695667481,0,0,0,0.100966449948148,0.15241361331,0,0.0974578807397524,0,0,0,0,0,0,0,0.375364950902364,0.36630324853453,0.214368379079066,0,1.12950368523413,1.38097570952153,0,0.171853182343688,0,0,1.35004500046361,0,0.453142408984205,0,0.103787347584177,0,0.170733605754134,0.729320151204882,0.209613162627982,0.183843508450014,0.222246727801615,0.618105171716683,0,1.51618327058278,0.25347929989024,0.754505365544305,0.468207537349412,0.448176066834085,0.631790158511746,1.42888107384922,0.811190281613988,0.77163688185482,0.824171801606613,1.47198920134397,0,0.532427418478012,0.715308569841963,0.581385666529314,0.658765662907314,0.761531471025089,0.914639864363863,1.05227884575137,1.08643291076689,0.561142271657738,0.474540072496697,0.591026894253381,0,0,0.964533054905707,0.749431733813838,0.701794825336225,0.214871054048298,0.57386499620653,0.661774257358546,0.927471342481686 | ||
|short_description=p@chr14:84844821..84844839,+ | |short_description=p@chr14:84844821..84844839,+ | ||
}} | }} |
Revision as of 17:35, 13 November 2012
Short description: | p@chr14:84844821..84844839, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:84844821..84844839, + |
Coexpression cluster: | MCL_coexpression_mm9:136 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.20e-07 | 23 |
neuroblast (sensu Vertebrata) | 1.20e-07 | 23 |
neuron of the ventral spinal cord | 3.73e-07 | 3 |
neuron | 7.71e-07 | 33 |
neuronal stem cell | 7.71e-07 | 33 |
neuroblast | 7.71e-07 | 33 |
electrically signaling cell | 7.71e-07 | 33 |
Ontology term | p-value | n |
---|---|---|
lung | 1.60e-17 | 14 |
respiratory tube | 1.60e-17 | 14 |
respiration organ | 1.60e-17 | 14 |
pair of lungs | 1.60e-17 | 14 |
lung primordium | 1.60e-17 | 14 |
lung bud | 1.60e-17 | 14 |
epithelial bud | 6.26e-14 | 17 |
thoracic cavity element | 6.26e-14 | 17 |
thoracic segment organ | 6.26e-14 | 17 |
thoracic cavity | 6.26e-14 | 17 |
thoracic segment of trunk | 6.26e-14 | 17 |
respiratory primordium | 6.26e-14 | 17 |
endoderm of foregut | 6.26e-14 | 17 |
epithelial fold | 2.01e-11 | 20 |
gray matter | 3.31e-10 | 34 |
tube | 1.85e-09 | 114 |
anatomical conduit | 2.40e-08 | 122 |
central nervous system | 7.90e-08 | 73 |
nervous system | 1.76e-07 | 75 |
neural tube | 2.87e-07 | 52 |
neural rod | 2.87e-07 | 52 |
future spinal cord | 2.87e-07 | 52 |
neural keel | 2.87e-07 | 52 |
basal ganglion | 3.27e-07 | 8 |
nuclear complex of neuraxis | 3.27e-07 | 8 |
aggregate regional part of brain | 3.27e-07 | 8 |
collection of basal ganglia | 3.27e-07 | 8 |
cerebral subcortex | 3.27e-07 | 8 |
regional part of spinal cord | 3.32e-07 | 5 |
gray matter of spinal cord | 3.32e-07 | 5 |
ventral horn of spinal cord | 3.73e-07 | 3 |
regional part of nervous system | 7.51e-07 | 54 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.