FFCP PHASE1:Mm9::chr7:31016724..31016735,-: Difference between revisions
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|id=chr7:31016724..31016735,- | |id=chr7:31016724..31016735,- | ||
|ontology_enrichment_celltype=CL:0000221!6.97e-21!44;CL:0000133!6.97e-21!44;CL:0000055!1.40e-20!50;CL:0002319!2.96e-20!43;CL:0000393!2.00e-16!39;CL:0000211!2.00e-16!39;CL:0000540!4.63e-16!33;CL:0000047!4.63e-16!33;CL:0000031!4.63e-16!33;CL:0000404!4.63e-16!33;CL:0002321!3.35e-14!70;CL:0000220!3.35e-14!70;CL:0000117!1.47e-13!23;CL:0000337!1.47e-13!23;CL:0000144!7.23e-13!121;CL:0000012!7.23e-13!121;CL:0002371!3.12e-12!118;CL:0000548!1.58e-11!115;CL:0000004!1.58e-11!115;CL:0000255!1.58e-11!115;CL:0000034!1.02e-09!97;CL:0000723!9.11e-09!91;CL:0000048!9.11e-09!91 | |ontology_enrichment_celltype=CL:0000221!6.97e-21!44;CL:0000133!6.97e-21!44;CL:0000055!1.40e-20!50;CL:0002319!2.96e-20!43;CL:0000393!2.00e-16!39;CL:0000211!2.00e-16!39;CL:0000540!4.63e-16!33;CL:0000047!4.63e-16!33;CL:0000031!4.63e-16!33;CL:0000404!4.63e-16!33;CL:0002321!3.35e-14!70;CL:0000220!3.35e-14!70;CL:0000117!1.47e-13!23;CL:0000337!1.47e-13!23;CL:0000144!7.23e-13!121;CL:0000012!7.23e-13!121;CL:0002371!3.12e-12!118;CL:0000548!1.58e-11!115;CL:0000004!1.58e-11!115;CL:0000255!1.58e-11!115;CL:0000034!1.02e-09!97;CL:0000723!9.11e-09!91;CL:0000048!9.11e-09!91 | ||
|ontology_enrichment_celltype_v019_2=CL:0000221,1.34e-21,44;CL:0000133,1.34e-21,44;CL:0002319,5.98e-21,43;CL:0000393,5.62e-17,39;CL:0000211,5.62e-17,39;CL:0000540,1.34e-16,33;CL:0000047,1.34e-16,33;CL:0000031,1.34e-16,33;CL:0000404,1.34e-16,33;CL:0002321,3.64e-15,70;CL:0000117,5.29e-14,23;CL:0000337,5.29e-14,23;CL:0000034,5.59e-11,97;CL:0000723,5.82e-10,91;CL:0000048,5.82e-10,91 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.28e-20!75;UBERON:0001016!1.28e-20!75;UBERON:0001017!9.43e-20!73;UBERON:0005743!9.43e-20!73;UBERON:0004121!1.75e-13!102;UBERON:0000924!1.75e-13!102;UBERON:0006601!1.75e-13!102;UBERON:0001049!2.56e-12!52;UBERON:0005068!2.56e-12!52;UBERON:0006241!2.56e-12!52;UBERON:0007135!2.56e-12!52;UBERON:0002346!2.37e-11!71;UBERON:0003075!2.37e-11!71;UBERON:0007284!2.37e-11!71;UBERON:0002616!3.46e-10!49;UBERON:0002020!4.60e-10!34;UBERON:0000033!1.03e-09!63;UBERON:0000955!1.31e-09!50;UBERON:0006238!1.31e-09!50;UBERON:0003080!2.70e-09!40;UBERON:0003056!3.04e-09!49;UBERON:0002780!4.63e-09!39;UBERON:0001890!4.63e-09!39;UBERON:0006240!4.63e-09!39;UBERON:0002791!3.67e-07!29;UBERON:0003528!3.67e-07!29;UBERON:0001893!3.67e-07!29 | |ontology_enrichment_uberon=UBERON:0000073!1.28e-20!75;UBERON:0001016!1.28e-20!75;UBERON:0001017!9.43e-20!73;UBERON:0005743!9.43e-20!73;UBERON:0004121!1.75e-13!102;UBERON:0000924!1.75e-13!102;UBERON:0006601!1.75e-13!102;UBERON:0001049!2.56e-12!52;UBERON:0005068!2.56e-12!52;UBERON:0006241!2.56e-12!52;UBERON:0007135!2.56e-12!52;UBERON:0002346!2.37e-11!71;UBERON:0003075!2.37e-11!71;UBERON:0007284!2.37e-11!71;UBERON:0002616!3.46e-10!49;UBERON:0002020!4.60e-10!34;UBERON:0000033!1.03e-09!63;UBERON:0000955!1.31e-09!50;UBERON:0006238!1.31e-09!50;UBERON:0003080!2.70e-09!40;UBERON:0003056!3.04e-09!49;UBERON:0002780!4.63e-09!39;UBERON:0001890!4.63e-09!39;UBERON:0006240!4.63e-09!39;UBERON:0002791!3.67e-07!29;UBERON:0003528!3.67e-07!29;UBERON:0001893!3.67e-07!29 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,5.45e-21,75;UBERON:0001017,4.27e-20,73;UBERON:0004121,5.71e-16,95;UBERON:0000924,5.71e-16,95;UBERON:0006601,5.71e-16,95;UBERON:0002346,8.03e-14,64;UBERON:0003075,8.03e-14,64;UBERON:0007284,8.03e-14,64;UBERON:0000073,2.75e-13,54;UBERON:0001049,1.83e-12,52;UBERON:0005068,1.83e-12,52;UBERON:0006241,1.83e-12,52;UBERON:0007135,1.83e-12,52;UBERON:0010371,1.25e-10,73;UBERON:0002020,2.23e-10,34;UBERON:0003056,1.51e-09,49;UBERON:0003080,1.65e-09,40;UBERON:0002616,2.17e-09,46;UBERON:0002780,2.88e-09,39;UBERON:0001890,2.88e-09,39;UBERON:0006240,2.88e-09,39;UBERON:0000955,8.85e-09,47;UBERON:0006238,8.85e-09,47;UBERON:0010314,1.15e-08,92;UBERON:0003528,2.27e-07,29;UBERON:0002791,2.27e-07,29;UBERON:0001893,2.27e-07,29 | |||
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| ||
|short_description=p2@Tbcb | |short_description=p2@Tbcb | ||
}} | }} |
Revision as of 03:00, 14 November 2012
Short description: | p2@Tbcb |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Tbcb_5end |
Coexpression cluster: | MCL_coexpression_mm9:87 |
Association with transcript: | 312bp_to_NM_025548, uc009gds.2_5end |
EntrezGene: | Tbcb |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 1.34e-21 | 44 |
neurectodermal cell | 1.34e-21 | 44 |
neural cell | 5.98e-21 | 43 |
electrically responsive cell | 5.62e-17 | 39 |
electrically active cell | 5.62e-17 | 39 |
neuron | 1.34e-16 | 33 |
neuronal stem cell | 1.34e-16 | 33 |
neuroblast | 1.34e-16 | 33 |
electrically signaling cell | 1.34e-16 | 33 |
embryonic cell | 3.64e-15 | 70 |
CNS neuron (sensu Vertebrata) | 5.29e-14 | 23 |
neuroblast (sensu Vertebrata) | 5.29e-14 | 23 |
stem cell | 5.59e-11 | 97 |
somatic stem cell | 5.82e-10 | 91 |
multi fate stem cell | 5.82e-10 | 91 |
Ontology term | p-value | n |
---|---|---|
nervous system | 5.45e-21 | 75 |
central nervous system | 4.27e-20 | 73 |
ectoderm-derived structure | 5.71e-16 | 95 |
ectoderm | 5.71e-16 | 95 |
presumptive ectoderm | 5.71e-16 | 95 |
neurectoderm | 8.03e-14 | 64 |
neural plate | 8.03e-14 | 64 |
presumptive neural plate | 8.03e-14 | 64 |
regional part of nervous system | 2.75e-13 | 54 |
neural tube | 1.83e-12 | 52 |
neural rod | 1.83e-12 | 52 |
future spinal cord | 1.83e-12 | 52 |
neural keel | 1.83e-12 | 52 |
ecto-epithelium | 1.25e-10 | 73 |
gray matter | 2.23e-10 | 34 |
pre-chordal neural plate | 1.51e-09 | 49 |
anterior neural tube | 1.65e-09 | 40 |
regional part of brain | 2.17e-09 | 46 |
regional part of forebrain | 2.88e-09 | 39 |
forebrain | 2.88e-09 | 39 |
future forebrain | 2.88e-09 | 39 |
brain | 8.85e-09 | 47 |
future brain | 8.85e-09 | 47 |
structure with developmental contribution from neural crest | 1.15e-08 | 92 |
brain grey matter | 2.27e-07 | 29 |
regional part of telencephalon | 2.27e-07 | 29 |
telencephalon | 2.27e-07 | 29 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.