FFCP PHASE1:Mm9::chr10:74523296..74523373,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=110279|HGNC=|UniProt=Q6PAJ1,A2RRK7|association_with_transcript=-267bp_to_ENSMUST00000164107,NM_001081412,uc007fqb.2_5end|description=CAGE_peak_1_at_Bcr_5end|id=chr10:74523296..74523373,+|ontology_enrichment_celltype=CL:0000221!9.93e-18!44;CL:0000133!9.93e-18!44;CL:0002319!1.14e-17!43;CL:0000055!2.65e-17!50;CL:0002321!1.40e-15!70;CL:0000220!1.40e-15!70;CL:0000540!2.11e-15!33;CL:0000047!2.11e-15!33;CL:0000031!2.11e-15!33;CL:0000404!2.11e-15!33;CL:0000393!7.06e-15!39;CL:0000211!7.06e-15!39;CL:0000117!1.73e-13!23;CL:0000337!1.73e-13!23|ontology_enrichment_celltype_v019_2=CL:0000221,9.93e-18,44;CL:0000133,9.93e-18,44;CL:0002319,1.14e-17,43;CL:0002321,1.40e-15,70;CL:0000540,2.11e-15,33;CL:0000047,2.11e-15,33;CL:0000031,2.11e-15,33;CL:0000404,2.11e-15,33;CL:0000393,7.05e-15,39;CL:0000211,7.05e-15,39;CL:0000117,1.72e-13,23;CL:0000337,1.72e-13,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.28e-31!73;UBERON:0005743!2.28e-31!73;UBERON:0000073!2.35e-31!75;UBERON:0001016!2.35e-31!75;UBERON:0004121!1.34e-28!102;UBERON:0000924!1.34e-28!102;UBERON:0006601!1.34e-28!102;UBERON:0001049!7.44e-23!52;UBERON:0005068!7.44e-23!52;UBERON:0006241!7.44e-23!52;UBERON:0007135!7.44e-23!52;UBERON:0000033!8.50e-23!63;UBERON:0000955!1.22e-22!50;UBERON:0006238!1.22e-22!50;UBERON:0002616!4.19e-22!49;UBERON:0002346!6.36e-21!71;UBERON:0003075!6.36e-21!71;UBERON:0007284!6.36e-21!71;UBERON:0003080!1.04e-18!40;UBERON:0003056!1.25e-18!49;UBERON:0002780!3.86e-18!39;UBERON:0001890!3.86e-18!39;UBERON:0006240!3.86e-18!39;UBERON:0002020!6.37e-18!34;UBERON:0002791!5.76e-16!29;UBERON:0003528!5.76e-16!29;UBERON:0001893!5.76e-16!29;UBERON:0000153!8.95e-15!94;UBERON:0007811!3.60e-14!86;UBERON:0004111!1.27e-12!122;UBERON:0000025!2.16e-11!114;UBERON:0000956!2.45e-11!21;UBERON:0001869!2.45e-11!21;UBERON:0000203!2.45e-11!21;UBERON:0000475!2.88e-10!200;UBERON:0002619!6.78e-09!17;UBERON:0000119!5.98e-07!183|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.28e-31,73;UBERON:0001016,2.35e-31,75;UBERON:0004121,4.64e-31,95;UBERON:0000924,4.64e-31,95;UBERON:0006601,4.64e-31,95;UBERON:0000073,2.65e-24,54;UBERON:0002346,9.91e-24,64;UBERON:0003075,9.91e-24,64;UBERON:0007284,9.91e-24,64;UBERON:0001049,7.44e-23,52;UBERON:0005068,7.44e-23,52;UBERON:0006241,7.44e-23,52;UBERON:0007135,7.44e-23,52;UBERON:0010371,2.17e-22,73;UBERON:0000955,5.29e-21,47;UBERON:0006238,5.29e-21,47;UBERON:0002616,1.78e-20,46;UBERON:0003080,1.04e-18,40;UBERON:0003056,1.25e-18,49;UBERON:0002780,3.86e-18,39;UBERON:0001890,3.86e-18,39;UBERON:0006240,3.86e-18,39;UBERON:0002020,6.37e-18,34;UBERON:0003528,5.76e-16,29;UBERON:0002791,5.76e-16,29;UBERON:0001893,5.76e-16,29;UBERON:0004111,1.27e-12,122;UBERON:0000025,2.16e-11,114;UBERON:0010314,2.31e-11,92;UBERON:0000956,2.45e-11,21;UBERON:0001869,2.45e-11,21;UBERON:0000203,2.45e-11,21;UBERON:0011216,4.05e-10,194;UBERON:0002619,6.78e-09,17;UBERON:0000119,1.95e-07,176;UBERON:0000483,5.19e-07,174|phase1_expression=18.7374151112609,15.0059425284925,17.2899710968024,30.246421130683,42.5761370454395,20.4812711732506,13.315920513945,8.65126267058561,8.024957162645,7.49006484230379,1.54096171402954,3.82906363177615,7.36163138704185,8.39235863222375,3.33109761815663,2.63217847606774,1.39912375625629,8.3597473819933,8.22686601634433,6.79023442876848,20.66551950671,16.0851340945434,17.2391860831697,5.11975752938901,9.40578052375397,13.2073351746455,14.2151458732495,9.69620547086501,11.2113817479261,8.06496415231778,4.43461021310609,0,0,0,5.48818077527422,6.81562045969819,7.35009682544529,5.4409111995798,3.1253413780952,3.14114246384279,7.64700934440319,4.09827290975067,4.85510353031154,21.0247686019214,26.6621329107323,24.778811541827,19.559783608701,30.3054967368821,30.5363794000916,24.3037373842854,21.6978953519312,17.2503077237966,15.1004345451963,13.7818806982155,13.1076581665561,12.0911934936895,18.3381401560804,10.8291139378263,49.1628999888823,50.2541430308431,51.9741750875067,19.9918273920788,24.9002542911119,7.64914759689189,2.96659908770092,0.7104801149461,20.3728075152515,39.5744854481201,45.0012917418793,46.712054662765,47.323116304061,22.8520787523043,21.4242484723065,36.0122949691965,40.3509432986775,36.7687514644008,35.2370819198044,29.6234624357635,27.0347498530989,37.4557057153751,35.3142304305301,30.7338888628488,24.5681039121215,34.8912818219642,36.977175961988,34.1769159149455,22.6370972470574,37.2798891650601,20.6732507799592,15.492169821891,21.1601076752225,17.2084775396277,10.1995700056163,29.6836755400799,16.8941868536394,14.3368603871147,13.6231087527799,9.54409806437123,7.27400812888033,8.12681021373782,19.4363919291819,41.0644727725817,61.153257529595,49.7746692207332,10.6080610095495,13.6814327356553,12.1325866803548,16.6708464389828,4.91981978929626,28.9462171176408,12.8379141806941,11.5696881758614,11.3001593655469,8.13902258984162,14.345822270556,14.702991185572,23.9779118702343,13.013942122792,17.6922110389975,7.76480879747564,11.4837589599405,10.6672555689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| ||
|EntrezGene=110279 | |||
|HGNC= | |||
|UniProt=Q6PAJ1,A2RRK7 | |||
|association_with_transcript=-267bp_to_ENSMUST00000164107,NM_001081412,uc007fqb.2_5end | |||
|description=CAGE_peak_1_at_Bcr_5end | |||
|id=chr10:74523296..74523373,+ | |||
|ontology_enrichment_celltype=CL:0000221!9.93e-18!44;CL:0000133!9.93e-18!44;CL:0002319!1.14e-17!43;CL:0000055!2.65e-17!50;CL:0002321!1.40e-15!70;CL:0000220!1.40e-15!70;CL:0000540!2.11e-15!33;CL:0000047!2.11e-15!33;CL:0000031!2.11e-15!33;CL:0000404!2.11e-15!33;CL:0000393!7.06e-15!39;CL:0000211!7.06e-15!39;CL:0000117!1.73e-13!23;CL:0000337!1.73e-13!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,9.93e-18,44;CL:0000133,9.93e-18,44;CL:0002319,1.14e-17,43;CL:0002321,1.40e-15,70;CL:0000540,2.11e-15,33;CL:0000047,2.11e-15,33;CL:0000031,2.11e-15,33;CL:0000404,2.11e-15,33;CL:0000393,7.05e-15,39;CL:0000211,7.05e-15,39;CL:0000117,1.72e-13,23;CL:0000337,1.72e-13,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.28e-31!73;UBERON:0005743!2.28e-31!73;UBERON:0000073!2.35e-31!75;UBERON:0001016!2.35e-31!75;UBERON:0004121!1.34e-28!102;UBERON:0000924!1.34e-28!102;UBERON:0006601!1.34e-28!102;UBERON:0001049!7.44e-23!52;UBERON:0005068!7.44e-23!52;UBERON:0006241!7.44e-23!52;UBERON:0007135!7.44e-23!52;UBERON:0000033!8.50e-23!63;UBERON:0000955!1.22e-22!50;UBERON:0006238!1.22e-22!50;UBERON:0002616!4.19e-22!49;UBERON:0002346!6.36e-21!71;UBERON:0003075!6.36e-21!71;UBERON:0007284!6.36e-21!71;UBERON:0003080!1.04e-18!40;UBERON:0003056!1.25e-18!49;UBERON:0002780!3.86e-18!39;UBERON:0001890!3.86e-18!39;UBERON:0006240!3.86e-18!39;UBERON:0002020!6.37e-18!34;UBERON:0002791!5.76e-16!29;UBERON:0003528!5.76e-16!29;UBERON:0001893!5.76e-16!29;UBERON:0000153!8.95e-15!94;UBERON:0007811!3.60e-14!86;UBERON:0004111!1.27e-12!122;UBERON:0000025!2.16e-11!114;UBERON:0000956!2.45e-11!21;UBERON:0001869!2.45e-11!21;UBERON:0000203!2.45e-11!21;UBERON:0000475!2.88e-10!200;UBERON:0002619!6.78e-09!17;UBERON:0000119!5.98e-07!183 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.28e-31,73;UBERON:0001016,2.35e-31,75;UBERON:0004121,4.64e-31,95;UBERON:0000924,4.64e-31,95;UBERON:0006601,4.64e-31,95;UBERON:0000073,2.65e-24,54;UBERON:0002346,9.91e-24,64;UBERON:0003075,9.91e-24,64;UBERON:0007284,9.91e-24,64;UBERON:0001049,7.44e-23,52;UBERON:0005068,7.44e-23,52;UBERON:0006241,7.44e-23,52;UBERON:0007135,7.44e-23,52;UBERON:0010371,2.17e-22,73;UBERON:0000955,5.29e-21,47;UBERON:0006238,5.29e-21,47;UBERON:0002616,1.78e-20,46;UBERON:0003080,1.04e-18,40;UBERON:0003056,1.25e-18,49;UBERON:0002780,3.86e-18,39;UBERON:0001890,3.86e-18,39;UBERON:0006240,3.86e-18,39;UBERON:0002020,6.37e-18,34;UBERON:0003528,5.76e-16,29;UBERON:0002791,5.76e-16,29;UBERON:0001893,5.76e-16,29;UBERON:0004111,1.27e-12,122;UBERON:0000025,2.16e-11,114;UBERON:0010314,2.31e-11,92;UBERON:0000956,2.45e-11,21;UBERON:0001869,2.45e-11,21;UBERON:0000203,2.45e-11,21;UBERON:0011216,4.05e-10,194;UBERON:0002619,6.78e-09,17;UBERON:0000119,1.95e-07,176;UBERON:0000483,5.19e-07,174 | |||
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| |||
|short_description=p1@Bcr | |||
}} |
Revision as of 17:20, 12 September 2013
Short description: | p1@Bcr |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Bcr_5end |
Coexpression cluster: | NA |
Association with transcript: | -267bp_to_ENSMUST00000164107, NM_001081412, uc007fqb.2_5end |
EntrezGene: | Bcr |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 9.93e-18 | 44 |
neurectodermal cell | 9.93e-18 | 44 |
neural cell | 1.14e-17 | 43 |
embryonic cell | 1.40e-15 | 70 |
neuron | 2.11e-15 | 33 |
neuronal stem cell | 2.11e-15 | 33 |
neuroblast | 2.11e-15 | 33 |
electrically signaling cell | 2.11e-15 | 33 |
electrically responsive cell | 7.05e-15 | 39 |
electrically active cell | 7.05e-15 | 39 |
CNS neuron (sensu Vertebrata) | 1.72e-13 | 23 |
neuroblast (sensu Vertebrata) | 1.72e-13 | 23 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.