FFCP PHASE1:Mm9::chr1:173537509..173537534,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=17085|HGNC=|MCL_coexpression_id=1633|UniProt=Q01965|association_with_transcript=6bp_to_ENSMUST00000068878_5end|description=CAGE_peak_2_at_Ly9_5end|id=chr1:173537509..173537534,-|ontology_enrichment_celltype=CL:0000988!5.00e-13!32;CL:0002032!5.00e-13!32;CL:0000037!5.00e-13!32;CL:0000566!5.00e-13!32;CL:0000837!5.00e-13!32;CL:0002031!8.47e-11!25;CL:0000838!8.85e-11!12;CL:0000738!3.38e-10!17;CL:0002087!3.38e-10!17;CL:0000084!5.29e-10!11;CL:0000827!5.29e-10!11;CL:0000542!1.65e-09!13;CL:0000051!1.65e-09!13;CL:0000791!1.00e-08!9;CL:0000789!1.00e-08!9;CL:0002420!1.00e-08!9;CL:0002419!1.00e-08!9;CL:0000790!1.00e-08!9;CL:0002320!2.95e-08!46;CL:0000134!2.95e-08!46;CL:0000624!6.40e-08!8|ontology_enrichment_celltype_v019_2=CL:0000988,7.63e-23,32;CL:0002032,7.63e-23,32;CL:0000037,7.63e-23,32;CL:0000837,7.63e-23,32;CL:0000838,5.73e-20,12;CL:0002031,1.50e-19,25;CL:0000738,1.64e-18,17;CL:0002087,1.64e-18,17;CL:0000084,2.05e-18,11;CL:0000827,2.05e-18,11;CL:0000542,3.62e-18,13;CL:0000051,3.62e-18,13;CL:0002320,7.48e-17,46;CL:0000134,7.48e-17,46;CL:0000791,7.28e-16,9;CL:0000789,7.28e-16,9;CL:0002420,7.28e-16,9;CL:0002419,7.28e-16,9;CL:0000790,7.28e-16,9;CL:0000624,2.92e-14,8;CL:0000219,2.64e-13,54;CL:0000893,3.45e-11,6;CL:0002489,3.45e-11,6;CL:0000898,3.45e-11,6;CL:0000809,3.45e-11,6;CL:0000810,3.45e-11,6;CL:0000895,3.45e-11,6;CL:0000808,3.45e-11,6;CL:0000894,3.45e-11,6;CL:0000806,3.45e-11,6;CL:0000807,3.45e-11,6;CL:0000805,3.45e-11,6;CL:0002425,3.45e-11,6;CL:0002436,3.45e-11,6;CL:0002427,3.45e-11,6;CL:0002428,3.45e-11,6;CL:0002429,3.45e-11,6;CL:0002433,3.45e-11,6;CL:0002431,3.45e-11,6;CL:0002432,3.45e-11,6;CL:0000049,6.77e-08,19;CL:0000034,6.15e-07,97|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!3.53e-25!48;UBERON:0002390!3.98e-23!45;UBERON:0003061!3.98e-23!45;UBERON:0002405!5.88e-23!70;UBERON:0004177!3.38e-16!29;UBERON:0005057!6.99e-14!51;UBERON:0003408!3.51e-13!24;UBERON:0002370!1.47e-12!23;UBERON:0000974!1.47e-12!23;UBERON:0004807!1.47e-12!23;UBERON:0005058!1.47e-12!23;UBERON:0003351!1.47e-12!23;UBERON:0009113!1.47e-12!23;UBERON:0003295!1.47e-12!23;UBERON:0009722!1.47e-12!23;UBERON:0005562!1.47e-12!23;UBERON:0007690!1.47e-12!23;UBERON:0003081!7.27e-12!88;UBERON:0006562!1.22e-11!24;UBERON:0001557!1.22e-11!24;UBERON:0001042!1.22e-11!24;UBERON:0008814!1.22e-11!24;UBERON:0009145!1.22e-11!24;UBERON:0000072!2.45e-09!27;UBERON:0001041!6.41e-09!92;UBERON:0000077!2.12e-08!97;UBERON:0002384!2.95e-08!46;UBERON:0001004!3.56e-08!42;UBERON:0000065!1.09e-07!41;UBERON:0002371!1.25e-07!16;UBERON:0001474!3.17e-07!22;UBERON:0004765!3.17e-07!22;UBERON:0001434!3.17e-07!22;UBERON:0003929!5.48e-07!55;UBERON:0000926!6.29e-07!193;UBERON:0004120!6.29e-07!193;UBERON:0006603!6.29e-07!193|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.96e-42,48;UBERON:0002405,2.96e-42,48;UBERON:0002390,2.92e-38,45;UBERON:0003061,2.92e-38,45;UBERON:0004177,7.76e-31,29;UBERON:0005057,7.76e-31,29;UBERON:0003408,8.78e-25,24;UBERON:0000077,2.86e-24,35;UBERON:0002370,1.54e-23,23;UBERON:0000974,1.54e-23,23;UBERON:0004807,1.54e-23,23;UBERON:0005058,1.54e-23,23;UBERON:0003351,1.54e-23,23;UBERON:0009113,1.54e-23,23;UBERON:0003295,1.54e-23,23;UBERON:0009722,1.54e-23,23;UBERON:0005562,1.54e-23,23;UBERON:0007690,1.54e-23,23;UBERON:0006562,2.56e-22,24;UBERON:0001557,2.56e-22,24;UBERON:0001042,2.56e-22,24;UBERON:0008814,2.56e-22,24;UBERON:0009145,2.56e-22,24;UBERON:0000072,3.34e-19,27;UBERON:0003081,3.31e-17,87;UBERON:0002384,7.48e-17,46;UBERON:0007811,1.53e-14,36;UBERON:0001004,3.30e-14,42;UBERON:0000065,2.98e-13,41;UBERON:0000153,2.99e-11,43;UBERON:0000926,1.67e-10,120;UBERON:0004120,1.67e-10,120;UBERON:0006603,1.67e-10,120;UBERON:0001041,7.11e-10,80;UBERON:0002371,1.43e-08,16;UBERON:0002106,2.21e-08,6;UBERON:0004457,2.21e-08,6;UBERON:0000042,2.21e-08,6;UBERON:0004854,2.21e-08,6;UBERON:0009034,2.21e-08,6;UBERON:0002095,2.21e-08,6;UBERON:0004782,2.21e-08,6;UBERON:0003281,2.21e-08,6;UBERON:0009664,2.21e-08,6;UBERON:0002296,2.21e-08,6;UBERON:0005602,2.21e-08,6;UBERON:0001179,2.21e-08,6;UBERON:0006293,2.21e-08,6;UBERON:0003929,1.45e-07,55;UBERON:0002530,4.56e-07,65;UBERON:0001474,9.35e-07,22;UBERON:0004765,9.35e-07,22;UBERON:0001434,9.35e-07,22|phase1_expression=0.160148847104794,0,0,0,0,0,0,24.6625547773411,3.94208422024667,8.42632294759177,20.5461561870606,24.4102806525729,21.9136934311943,34.181377345828,0.999329285446988,2.42970320867791,0,14.6689906891581,10.8320402548534,5.94145512517242,0.765389611359628,3.17731043842833,4.70159620450084,1.43993180514066,1.37645568640302,0,0,0,0,0.252030129759931,0.221730510655305,0,0,0,0,0,0,1.25559489221072,0,0.523523743973798,0,0.683045484958446,0,0,0,0,0,0,0,0,0,0,8.22134769682908,5.07753499407941,13.1076581665561,0,0,0.515672092277442,0,0,0,0,0,3.5995988691256,3.9554654502679,0.7104801149461,0.299600110518405,0,0,0,0,0,0,0.122490799214954,0,0,0,0.255374676170375,0,0,0.0914876436024097,0,0,0,0,0.294628585473668,0.284743361598206,0,0,0,0,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,0.68510327831436,17.3488382043605,0.742210695324124,0,0,0,0,0,0,0,0.722996784599558,0.884610551949874,0,0.220841518460394,1.45462575940567,0,0,0.41889341362691,0.255457055208591,2.03685711660064,1.19980546198682,1.14363204365758,0,0,0.125654352112864,0,0,0,0,0.101839363850316,1.7416975885413,0,0.420883711772948,0,0,0,0,0.0680364991513279,0,0.0937017245597288,0,0,0,0,0,0.834141747676794,0.348252166522167,0,0,0.702213187313235,2.05878325691772,1.13665399758237,0,0,0,0,0,0,0,0,0,0,0.32833492815819,0,0.146199987425332,0.439100230582101,0.134206418760372,0,0.102904612379284,0,0.264450566663544,0,0,0.128867461322093,0.201683524623343,0,0.380451252225118,0,0,0,0,0.38992817423824,0,0.432276099749388,0.398282546508734,0,0,0,0,0,0,0,0.147610147979602,0,0,0.296452627087149,0.166845105716094,0.589676985339609,0.224862112384854,0.405720242777006,0.482354319504834,0.25462585178142,0.863088412352432,1.45921704097532,0.549122826376163,0,0.372140947668503,0,0.252578877947112,0.179397413521912,0.482443521363367,0.923765950833023,0,0,0,0,0.335012514883631,0,0,0.157635144106191,0,0.159454768657487,1.3109065177259,1.55416483679306,0.723245292907558,24.1266054302836,20.1245103012923,0.983528546038072,1.10374698521893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0.178065603667255,0,0.659880491890142,0,0,0,0.188605079755898,0,0.307435147943927,0,0,0.712994756769443,0.632073515871632,0,1.03135543248187,0,0,0,0,0,0,0,0,0.23467170806371,0,0.220528398054962,0,0,0.120625849856312,0,0,0.291480836629851,0,3.75915937755276,1.03193433981611,2.03713980106683,1.88368457004691,3.00727300986255,4.34678529092393,1.69978429993855,1.95932033253121,2.07299960706636,0,0,0.203319467126849,0,0,0,0.134864346384821,0.247960367176008,0,0.259229946583586,2.4853572523477,0,0,0,0,0,0,0,0,0,0,0,7.2682557744481,0.608175645870493,1.95150818613172,3.11809975146708,5.90788095702689,5.96044064343795,6.12996792551841,7.38447635872886,7.26958439626663,4.95344243257499,8.36857336635776,8.1864619821392,8.178006539428,8.06450625052826,0,0,0,0,0,0.375364950902364,0.549454872801795,0,0,0,0,0,0,0,0,0,0.45032120322422,0,0.51776031175182,0,0,0,0.243106717068294,0,0,0.222246727801615,0,0,0,0,0,0.0936415074698824,0.128050304809739,0.229741875822453,0,0.115884325944855,0,0,0,0.342869252385415,0,0,0,0.188218760830661,0.169229215783353,0.182927972872773,0,0.135804113845862,0,0,0.394017929502254,0,0,0.192906610981141,0,0.233931608445408,0.214871054048298,0,0,0|short_description=p2@Ly9}} | ||
|EntrezGene=17085 | |||
|HGNC= | |||
|MCL_coexpression_id=1633 | |||
|UniProt=Q01965 | |||
|association_with_transcript=6bp_to_ENSMUST00000068878_5end | |||
|description=CAGE_peak_2_at_Ly9_5end | |||
|id=chr1:173537509..173537534,- | |||
|ontology_enrichment_celltype=CL:0000988!5.00e-13!32;CL:0002032!5.00e-13!32;CL:0000037!5.00e-13!32;CL:0000566!5.00e-13!32;CL:0000837!5.00e-13!32;CL:0002031!8.47e-11!25;CL:0000838!8.85e-11!12;CL:0000738!3.38e-10!17;CL:0002087!3.38e-10!17;CL:0000084!5.29e-10!11;CL:0000827!5.29e-10!11;CL:0000542!1.65e-09!13;CL:0000051!1.65e-09!13;CL:0000791!1.00e-08!9;CL:0000789!1.00e-08!9;CL:0002420!1.00e-08!9;CL:0002419!1.00e-08!9;CL:0000790!1.00e-08!9;CL:0002320!2.95e-08!46;CL:0000134!2.95e-08!46;CL:0000624!6.40e-08!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,7.63e-23,32;CL:0002032,7.63e-23,32;CL:0000037,7.63e-23,32;CL:0000837,7.63e-23,32;CL:0000838,5.73e-20,12;CL:0002031,1.50e-19,25;CL:0000738,1.64e-18,17;CL:0002087,1.64e-18,17;CL:0000084,2.05e-18,11;CL:0000827,2.05e-18,11;CL:0000542,3.62e-18,13;CL:0000051,3.62e-18,13;CL:0002320,7.48e-17,46;CL:0000134,7.48e-17,46;CL:0000791,7.28e-16,9;CL:0000789,7.28e-16,9;CL:0002420,7.28e-16,9;CL:0002419,7.28e-16,9;CL:0000790,7.28e-16,9;CL:0000624,2.92e-14,8;CL:0000219,2.64e-13,54;CL:0000893,3.45e-11,6;CL:0002489,3.45e-11,6;CL:0000898,3.45e-11,6;CL:0000809,3.45e-11,6;CL:0000810,3.45e-11,6;CL:0000895,3.45e-11,6;CL:0000808,3.45e-11,6;CL:0000894,3.45e-11,6;CL:0000806,3.45e-11,6;CL:0000807,3.45e-11,6;CL:0000805,3.45e-11,6;CL:0002425,3.45e-11,6;CL:0002436,3.45e-11,6;CL:0002427,3.45e-11,6;CL:0002428,3.45e-11,6;CL:0002429,3.45e-11,6;CL:0002433,3.45e-11,6;CL:0002431,3.45e-11,6;CL:0002432,3.45e-11,6;CL:0000049,6.77e-08,19;CL:0000034,6.15e-07,97 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!3.53e-25!48;UBERON:0002390!3.98e-23!45;UBERON:0003061!3.98e-23!45;UBERON:0002405!5.88e-23!70;UBERON:0004177!3.38e-16!29;UBERON:0005057!6.99e-14!51;UBERON:0003408!3.51e-13!24;UBERON:0002370!1.47e-12!23;UBERON:0000974!1.47e-12!23;UBERON:0004807!1.47e-12!23;UBERON:0005058!1.47e-12!23;UBERON:0003351!1.47e-12!23;UBERON:0009113!1.47e-12!23;UBERON:0003295!1.47e-12!23;UBERON:0009722!1.47e-12!23;UBERON:0005562!1.47e-12!23;UBERON:0007690!1.47e-12!23;UBERON:0003081!7.27e-12!88;UBERON:0006562!1.22e-11!24;UBERON:0001557!1.22e-11!24;UBERON:0001042!1.22e-11!24;UBERON:0008814!1.22e-11!24;UBERON:0009145!1.22e-11!24;UBERON:0000072!2.45e-09!27;UBERON:0001041!6.41e-09!92;UBERON:0000077!2.12e-08!97;UBERON:0002384!2.95e-08!46;UBERON:0001004!3.56e-08!42;UBERON:0000065!1.09e-07!41;UBERON:0002371!1.25e-07!16;UBERON:0001474!3.17e-07!22;UBERON:0004765!3.17e-07!22;UBERON:0001434!3.17e-07!22;UBERON:0003929!5.48e-07!55;UBERON:0000926!6.29e-07!193;UBERON:0004120!6.29e-07!193;UBERON:0006603!6.29e-07!193 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.96e-42,48;UBERON:0002405,2.96e-42,48;UBERON:0002390,2.92e-38,45;UBERON:0003061,2.92e-38,45;UBERON:0004177,7.76e-31,29;UBERON:0005057,7.76e-31,29;UBERON:0003408,8.78e-25,24;UBERON:0000077,2.86e-24,35;UBERON:0002370,1.54e-23,23;UBERON:0000974,1.54e-23,23;UBERON:0004807,1.54e-23,23;UBERON:0005058,1.54e-23,23;UBERON:0003351,1.54e-23,23;UBERON:0009113,1.54e-23,23;UBERON:0003295,1.54e-23,23;UBERON:0009722,1.54e-23,23;UBERON:0005562,1.54e-23,23;UBERON:0007690,1.54e-23,23;UBERON:0006562,2.56e-22,24;UBERON:0001557,2.56e-22,24;UBERON:0001042,2.56e-22,24;UBERON:0008814,2.56e-22,24;UBERON:0009145,2.56e-22,24;UBERON:0000072,3.34e-19,27;UBERON:0003081,3.31e-17,87;UBERON:0002384,7.48e-17,46;UBERON:0007811,1.53e-14,36;UBERON:0001004,3.30e-14,42;UBERON:0000065,2.98e-13,41;UBERON:0000153,2.99e-11,43;UBERON:0000926,1.67e-10,120;UBERON:0004120,1.67e-10,120;UBERON:0006603,1.67e-10,120;UBERON:0001041,7.11e-10,80;UBERON:0002371,1.43e-08,16;UBERON:0002106,2.21e-08,6;UBERON:0004457,2.21e-08,6;UBERON:0000042,2.21e-08,6;UBERON:0004854,2.21e-08,6;UBERON:0009034,2.21e-08,6;UBERON:0002095,2.21e-08,6;UBERON:0004782,2.21e-08,6;UBERON:0003281,2.21e-08,6;UBERON:0009664,2.21e-08,6;UBERON:0002296,2.21e-08,6;UBERON:0005602,2.21e-08,6;UBERON:0001179,2.21e-08,6;UBERON:0006293,2.21e-08,6;UBERON:0003929,1.45e-07,55;UBERON:0002530,4.56e-07,65;UBERON:0001474,9.35e-07,22;UBERON:0004765,9.35e-07,22;UBERON:0001434,9.35e-07,22 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,24.6625547773411,3.94208422024667,8.42632294759177,20.5461561870606,24.4102806525729,21.9136934311943,34.181377345828,0.999329285446988,2.42970320867791,0,14.6689906891581,10.8320402548534,5.94145512517242,0.765389611359628,3.17731043842833,4.70159620450084,1.43993180514066,1.37645568640302,0,0,0,0,0.252030129759931,0.221730510655305,0,0,0,0,0,0,1.25559489221072,0,0.523523743973798,0,0.683045484958446,0,0,0,0,0,0,0,0,0,0,8.22134769682908,5.07753499407941,13.1076581665561,0,0,0.515672092277442,0,0,0,0,0,3.5995988691256,3.9554654502679,0.7104801149461,0.299600110518405,0,0,0,0,0,0,0.122490799214954,0,0,0,0.255374676170375,0,0,0.0914876436024097,0,0,0,0,0.294628585473668,0.284743361598206,0,0,0,0,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,0.68510327831436,17.3488382043605,0.742210695324124,0,0,0,0,0,0,0,0.722996784599558,0.884610551949874,0,0.220841518460394,1.45462575940567,0,0,0.41889341362691,0.255457055208591,2.03685711660064,1.19980546198682,1.14363204365758,0,0,0.125654352112864,0,0,0,0,0.101839363850316,1.7416975885413,0,0.420883711772948,0,0,0,0,0.0680364991513279,0,0.0937017245597288,0,0,0,0,0,0.834141747676794,0.348252166522167,0,0,0.702213187313235,2.05878325691772,1.13665399758237,0,0,0,0,0,0,0,0,0,0,0.32833492815819,0,0.146199987425332,0.439100230582101,0.134206418760372,0,0.102904612379284,0,0.264450566663544,0,0,0.128867461322093,0.201683524623343,0,0.380451252225118,0,0,0,0,0.38992817423824,0,0.432276099749388,0.398282546508734,0,0,0,0,0,0,0,0.147610147979602,0,0,0.296452627087149,0.166845105716094,0.589676985339609,0.224862112384854,0.405720242777006,0.482354319504834,0.25462585178142,0.863088412352432,1.45921704097532,0.549122826376163,0,0.372140947668503,0,0.252578877947112,0.179397413521912,0.482443521363367,0.923765950833023,0,0,0,0,0.335012514883631,0,0,0.157635144106191,0,0.159454768657487,1.3109065177259,1.55416483679306,0.723245292907558,24.1266054302836,20.1245103012923,0.983528546038072,1.10374698521893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0.178065603667255,0,0.659880491890142,0,0,0,0.188605079755898,0,0.307435147943927,0,0,0.712994756769443,0.632073515871632,0,1.03135543248187,0,0,0,0,0,0,0,0,0.23467170806371,0,0.220528398054962,0,0,0.120625849856312,0,0,0.291480836629851,0,3.75915937755276,1.03193433981611,2.03713980106683,1.88368457004691,3.00727300986255,4.34678529092393,1.69978429993855,1.95932033253121,2.07299960706636,0,0,0.203319467126849,0,0,0,0.134864346384821,0.247960367176008,0,0.259229946583586,2.4853572523477,0,0,0,0,0,0,0,0,0,0,0,7.2682557744481,0.608175645870493,1.95150818613172,3.11809975146708,5.90788095702689,5.96044064343795,6.12996792551841,7.38447635872886,7.26958439626663,4.95344243257499,8.36857336635776,8.1864619821392,8.178006539428,8.06450625052826,0,0,0,0,0,0.375364950902364,0.549454872801795,0,0,0,0,0,0,0,0,0,0.45032120322422,0,0.51776031175182,0,0,0,0.243106717068294,0,0,0.222246727801615,0,0,0,0,0,0.0936415074698824,0.128050304809739,0.229741875822453,0,0.115884325944855,0,0,0,0.342869252385415,0,0,0,0.188218760830661,0.169229215783353,0.182927972872773,0,0.135804113845862,0,0,0.394017929502254,0,0,0.192906610981141,0,0.233931608445408,0.214871054048298,0,0,0 | |||
|short_description=p2@Ly9 | |||
}} |
Revision as of 19:42, 13 September 2013
Short description: | p2@Ly9 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Ly9_5end |
Coexpression cluster: | MCL_coexpression_mm9:1633 |
Association with transcript: | 6bp_to_ENSMUST00000068878_5end |
EntrezGene: | Ly9 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.