FFCP PHASE1:Mm9::chr10:19317974..19317989,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1887|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:19317974..19317989,-|id=chr10:19317974..19317989,-|ontology_enrichment_celltype=CL:0000838!1.43e-25!12;CL:0000542!1.81e-23!13;CL:0000051!1.81e-23!13;CL:0000084!7.47e-23!11;CL:0000827!7.47e-23!11;CL:0000791!9.85e-23!9;CL:0000789!9.85e-23!9;CL:0002420!9.85e-23!9;CL:0002419!9.85e-23!9;CL:0000790!9.85e-23!9;CL:0000624!1.63e-19!8;CL:0000738!1.58e-17!17;CL:0002087!1.58e-17!17;CL:0000893!4.10e-13!6;CL:0002489!4.10e-13!6;CL:0000898!4.10e-13!6;CL:0000809!4.10e-13!6;CL:0000810!4.10e-13!6;CL:0000895!4.10e-13!6;CL:0000808!4.10e-13!6;CL:0000894!4.10e-13!6;CL:0000806!4.10e-13!6;CL:0000807!4.10e-13!6;CL:0000805!4.10e-13!6;CL:0002425!4.10e-13!6;CL:0002436!4.10e-13!6;CL:0002427!4.10e-13!6;CL:0002428!4.10e-13!6;CL:0002429!4.10e-13!6;CL:0002433!4.10e-13!6;CL:0002431!4.10e-13!6;CL:0002432!4.10e-13!6;CL:0002031!2.41e-11!25;CL:0000988!2.84e-10!32;CL:0002032!2.84e-10!32;CL:0000037!2.84e-10!32;CL:0000566!2.84e-10!32;CL:0000837!2.84e-10!32;CL:0002320!7.11e-08!46;CL:0000134!7.11e-08!46|ontology_enrichment_celltype_v019_2=CL:0000791,6.82e-17,9;CL:0000789,6.82e-17,9;CL:0002420,6.82e-17,9;CL:0002419,6.82e-17,9;CL:0000790,6.82e-17,9;CL:0000084,8.16e-14,11;CL:0000827,8.16e-14,11;CL:0000838,1.17e-12,12;CL:0000624,2.12e-12,8;CL:0000542,1.12e-11,13;CL:0000051,1.12e-11,13;CL:0000738,6.60e-09,17;CL:0002087,6.60e-09,17;CL:0000815,1.20e-07,1;CL:0000792,1.20e-07,1;CL:0000625,1.59e-07,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002370!1.32e-42!23;UBERON:0000974!1.32e-42!23;UBERON:0004807!1.32e-42!23;UBERON:0005058!1.32e-42!23;UBERON:0003351!1.32e-42!23;UBERON:0009113!1.32e-42!23;UBERON:0003295!1.32e-42!23;UBERON:0009722!1.32e-42!23;UBERON:0005562!1.32e-42!23;UBERON:0007690!1.32e-42!23;UBERON:0006562!1.11e-40!24;UBERON:0003408!1.11e-40!24;UBERON:0001557!1.11e-40!24;UBERON:0001042!1.11e-40!24;UBERON:0008814!1.11e-40!24;UBERON:0009145!1.11e-40!24;UBERON:0000072!9.23e-36!27;UBERON:0004177!4.79e-33!29;UBERON:0000063!9.27e-27!35;UBERON:0002390!1.95e-22!45;UBERON:0003061!1.95e-22!45;UBERON:0000065!2.61e-22!41;UBERON:0001004!1.08e-21!42;UBERON:0002193!8.53e-21!48;UBERON:0005057!2.15e-19!51;UBERON:0003929!1.06e-17!55;UBERON:0002368!6.60e-16!60;UBERON:0000490!7.60e-16!66;UBERON:0002405!1.08e-14!70;UBERON:0002530!2.19e-14!65;UBERON:0005911!2.50e-13!69;UBERON:0000949!1.30e-12!72;UBERON:0003081!1.36e-09!88;UBERON:0001041!4.95e-09!92;UBERON:0007811!1.02e-08!86;UBERON:0000077!2.28e-08!97;UBERON:0002384!7.11e-08!46;UBERON:0000153!1.15e-07!94;UBERON:0000064!4.27e-07!99|ontology_enrichment_uberon_v019_2=UBERON:0002370,5.66e-35,23;UBERON:0000974,5.66e-35,23;UBERON:0004807,5.66e-35,23;UBERON:0005058,5.66e-35,23;UBERON:0003351,5.66e-35,23;UBERON:0009113,5.66e-35,23;UBERON:0003295,5.66e-35,23;UBERON:0009722,5.66e-35,23;UBERON:0005562,5.66e-35,23;UBERON:0007690,5.66e-35,23;UBERON:0006562,1.82e-33,24;UBERON:0003408,1.82e-33,24;UBERON:0001557,1.82e-33,24;UBERON:0001042,1.82e-33,24;UBERON:0008814,1.82e-33,24;UBERON:0009145,1.82e-33,24;UBERON:0000072,1.32e-29,27;UBERON:0004177,1.78e-27,29;UBERON:0005057,1.78e-27,29;UBERON:0000077,1.53e-22,35;UBERON:0007811,7.04e-22,36;UBERON:0000065,4.80e-19,41;UBERON:0001004,1.47e-18,42;UBERON:0000153,4.28e-18,43;UBERON:0002390,3.14e-17,45;UBERON:0003061,3.14e-17,45;UBERON:0002193,4.59e-16,48;UBERON:0002405,4.59e-16,48;UBERON:0003929,7.73e-14,55;UBERON:0002368,1.46e-12,60;UBERON:0002530,1.75e-11,65;UBERON:0000490,2.75e-11,66;UBERON:0005911,9.91e-11,69;UBERON:0000949,3.21e-10,72;UBERON:0001041,4.81e-09,80;UBERON:0003081,3.43e-08,87|phase1_expression=0,0,0,0,0,0,0,6.45616617207881,0.985521055061667,0.234064526321993,0,0.159544317990673,2.05440875917447,1.39872643870396,0,0,0,0,0,0,0,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335565212115473,5.07753499407941,4.03312558970957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21207784439725,0,0.102710957164827,0.25984164595559,1.61124026100733,1.58945083825012,0.841368146639782,1.47689527174577,2.01932899896295,1.21930890648,1.20991422164209,1.16949456887703,2.11666051608725,2.68816875017609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr10:19317974..19317989,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1887 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:19317974..19317989,- | |||
|id=chr10:19317974..19317989,- | |||
|ontology_enrichment_celltype=CL:0000838!1.43e-25!12;CL:0000542!1.81e-23!13;CL:0000051!1.81e-23!13;CL:0000084!7.47e-23!11;CL:0000827!7.47e-23!11;CL:0000791!9.85e-23!9;CL:0000789!9.85e-23!9;CL:0002420!9.85e-23!9;CL:0002419!9.85e-23!9;CL:0000790!9.85e-23!9;CL:0000624!1.63e-19!8;CL:0000738!1.58e-17!17;CL:0002087!1.58e-17!17;CL:0000893!4.10e-13!6;CL:0002489!4.10e-13!6;CL:0000898!4.10e-13!6;CL:0000809!4.10e-13!6;CL:0000810!4.10e-13!6;CL:0000895!4.10e-13!6;CL:0000808!4.10e-13!6;CL:0000894!4.10e-13!6;CL:0000806!4.10e-13!6;CL:0000807!4.10e-13!6;CL:0000805!4.10e-13!6;CL:0002425!4.10e-13!6;CL:0002436!4.10e-13!6;CL:0002427!4.10e-13!6;CL:0002428!4.10e-13!6;CL:0002429!4.10e-13!6;CL:0002433!4.10e-13!6;CL:0002431!4.10e-13!6;CL:0002432!4.10e-13!6;CL:0002031!2.41e-11!25;CL:0000988!2.84e-10!32;CL:0002032!2.84e-10!32;CL:0000037!2.84e-10!32;CL:0000566!2.84e-10!32;CL:0000837!2.84e-10!32;CL:0002320!7.11e-08!46;CL:0000134!7.11e-08!46 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,6.82e-17,9;CL:0000789,6.82e-17,9;CL:0002420,6.82e-17,9;CL:0002419,6.82e-17,9;CL:0000790,6.82e-17,9;CL:0000084,8.16e-14,11;CL:0000827,8.16e-14,11;CL:0000838,1.17e-12,12;CL:0000624,2.12e-12,8;CL:0000542,1.12e-11,13;CL:0000051,1.12e-11,13;CL:0000738,6.60e-09,17;CL:0002087,6.60e-09,17;CL:0000815,1.20e-07,1;CL:0000792,1.20e-07,1;CL:0000625,1.59e-07,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!1.32e-42!23;UBERON:0000974!1.32e-42!23;UBERON:0004807!1.32e-42!23;UBERON:0005058!1.32e-42!23;UBERON:0003351!1.32e-42!23;UBERON:0009113!1.32e-42!23;UBERON:0003295!1.32e-42!23;UBERON:0009722!1.32e-42!23;UBERON:0005562!1.32e-42!23;UBERON:0007690!1.32e-42!23;UBERON:0006562!1.11e-40!24;UBERON:0003408!1.11e-40!24;UBERON:0001557!1.11e-40!24;UBERON:0001042!1.11e-40!24;UBERON:0008814!1.11e-40!24;UBERON:0009145!1.11e-40!24;UBERON:0000072!9.23e-36!27;UBERON:0004177!4.79e-33!29;UBERON:0000063!9.27e-27!35;UBERON:0002390!1.95e-22!45;UBERON:0003061!1.95e-22!45;UBERON:0000065!2.61e-22!41;UBERON:0001004!1.08e-21!42;UBERON:0002193!8.53e-21!48;UBERON:0005057!2.15e-19!51;UBERON:0003929!1.06e-17!55;UBERON:0002368!6.60e-16!60;UBERON:0000490!7.60e-16!66;UBERON:0002405!1.08e-14!70;UBERON:0002530!2.19e-14!65;UBERON:0005911!2.50e-13!69;UBERON:0000949!1.30e-12!72;UBERON:0003081!1.36e-09!88;UBERON:0001041!4.95e-09!92;UBERON:0007811!1.02e-08!86;UBERON:0000077!2.28e-08!97;UBERON:0002384!7.11e-08!46;UBERON:0000153!1.15e-07!94;UBERON:0000064!4.27e-07!99 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,5.66e-35,23;UBERON:0000974,5.66e-35,23;UBERON:0004807,5.66e-35,23;UBERON:0005058,5.66e-35,23;UBERON:0003351,5.66e-35,23;UBERON:0009113,5.66e-35,23;UBERON:0003295,5.66e-35,23;UBERON:0009722,5.66e-35,23;UBERON:0005562,5.66e-35,23;UBERON:0007690,5.66e-35,23;UBERON:0006562,1.82e-33,24;UBERON:0003408,1.82e-33,24;UBERON:0001557,1.82e-33,24;UBERON:0001042,1.82e-33,24;UBERON:0008814,1.82e-33,24;UBERON:0009145,1.82e-33,24;UBERON:0000072,1.32e-29,27;UBERON:0004177,1.78e-27,29;UBERON:0005057,1.78e-27,29;UBERON:0000077,1.53e-22,35;UBERON:0007811,7.04e-22,36;UBERON:0000065,4.80e-19,41;UBERON:0001004,1.47e-18,42;UBERON:0000153,4.28e-18,43;UBERON:0002390,3.14e-17,45;UBERON:0003061,3.14e-17,45;UBERON:0002193,4.59e-16,48;UBERON:0002405,4.59e-16,48;UBERON:0003929,7.73e-14,55;UBERON:0002368,1.46e-12,60;UBERON:0002530,1.75e-11,65;UBERON:0000490,2.75e-11,66;UBERON:0005911,9.91e-11,69;UBERON:0000949,3.21e-10,72;UBERON:0001041,4.81e-09,80;UBERON:0003081,3.43e-08,87 | |||
|phase1_expression=0,0,0,0,0,0,0,6.45616617207881,0.985521055061667,0.234064526321993,0,0.159544317990673,2.05440875917447,1.39872643870396,0,0,0,0,0,0,0,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335565212115473,5.07753499407941,4.03312558970957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21207784439725,0,0.102710957164827,0.25984164595559,1.61124026100733,1.58945083825012,0.841368146639782,1.47689527174577,2.01932899896295,1.21930890648,1.20991422164209,1.16949456887703,2.11666051608725,2.68816875017609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:19317974..19317989,- | |||
}} |
Revision as of 16:21, 12 September 2013
Short description: | p@chr10:19317974..19317989, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:19317974..19317989, - |
Coexpression cluster: | MCL_coexpression_mm9:1887 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 6.82e-17 | 9 |
alpha-beta T cell | 6.82e-17 | 9 |
immature T cell | 6.82e-17 | 9 |
mature T cell | 6.82e-17 | 9 |
immature alpha-beta T cell | 6.82e-17 | 9 |
T cell | 8.16e-14 | 11 |
pro-T cell | 8.16e-14 | 11 |
lymphoid lineage restricted progenitor cell | 1.17e-12 | 12 |
CD4-positive, alpha-beta T cell | 2.12e-12 | 8 |
lymphocyte | 1.12e-11 | 13 |
common lymphoid progenitor | 1.12e-11 | 13 |
leukocyte | 6.60e-09 | 17 |
nongranular leukocyte | 6.60e-09 | 17 |
regulatory T cell | 1.20e-07 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 1.20e-07 | 1 |
CD8-positive, alpha-beta T cell | 1.59e-07 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.