FFCP PHASE1:Mm9::chr8:98201645..98201708,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=234593|HGNC=|MCL_coexpression_id=87|UniProt=Q8BTG7|association_with_transcript=-276bp_to_ENSMUST00000041318,uc009mys.2_5end|description=CAGE_peak_2_at_Ndrg4_5end|id=chr8:98201645..98201708,+|ontology_enrichment_celltype=CL:0000117!1.94e-16!23;CL:0000337!1.94e-16!23;CL:0000540!1.28e-12!33;CL:0000047!1.28e-12!33;CL:0000031!1.28e-12!33;CL:0000404!1.28e-12!33;CL:0000221!2.69e-09!44;CL:0000133!2.69e-09!44;CL:0002319!3.54e-09!43;CL:0000393!1.66e-08!39;CL:0000211!1.66e-08!39|ontology_enrichment_celltype_v019_2=CL:0000117,2.61e-20,23;CL:0000337,2.61e-20,23;CL:0000540,2.61e-12,33;CL:0000047,2.61e-12,33;CL:0000031,2.61e-12,33;CL:0000404,2.61e-12,33;CL:0000221,7.06e-09,44;CL:0000133,7.06e-09,44;CL:0000393,7.93e-09,39;CL:0000211,7.93e-09,39;CL:0002319,1.00e-08,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!5.55e-22!75;UBERON:0001016!5.55e-22!75;UBERON:0001017!9.08e-22!73;UBERON:0005743!9.08e-22!73;UBERON:0002346!3.53e-21!71;UBERON:0003075!3.53e-21!71;UBERON:0007284!3.53e-21!71;UBERON:0001049!1.49e-20!52;UBERON:0005068!1.49e-20!52;UBERON:0006241!1.49e-20!52;UBERON:0007135!1.49e-20!52;UBERON:0004121!1.79e-20!102;UBERON:0000924!1.79e-20!102;UBERON:0006601!1.79e-20!102;UBERON:0000033!1.32e-19!63;UBERON:0000955!6.40e-19!50;UBERON:0006238!6.40e-19!50;UBERON:0002020!1.06e-18!34;UBERON:0002616!3.00e-18!49;UBERON:0003056!4.99e-18!49;UBERON:0003080!1.66e-16!40;UBERON:0002780!6.18e-16!39;UBERON:0001890!6.18e-16!39;UBERON:0006240!6.18e-16!39;UBERON:0002791!5.53e-15!29;UBERON:0003528!5.53e-15!29;UBERON:0001893!5.53e-15!29;UBERON:0000956!6.89e-10!21;UBERON:0001869!6.89e-10!21;UBERON:0000203!6.89e-10!21;UBERON:0007811!1.93e-08!86;UBERON:0000153!4.60e-08!94;UBERON:0002619!9.59e-08!17;UBERON:0000468!1.64e-07!333|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.19e-25,54;UBERON:0001049,6.72e-24,52;UBERON:0005068,6.72e-24,52;UBERON:0006241,6.72e-24,52;UBERON:0007135,6.72e-24,52;UBERON:0002020,9.66e-23,34;UBERON:0002346,1.85e-22,64;UBERON:0003075,1.85e-22,64;UBERON:0007284,1.85e-22,64;UBERON:0001016,1.97e-22,75;UBERON:0001017,3.84e-22,73;UBERON:0010314,5.52e-20,92;UBERON:0000955,1.61e-19,47;UBERON:0006238,1.61e-19,47;UBERON:0004121,8.24e-19,95;UBERON:0000924,8.24e-19,95;UBERON:0006601,8.24e-19,95;UBERON:0003056,9.55e-19,49;UBERON:0002616,1.03e-18,46;UBERON:0010371,1.66e-18,73;UBERON:0003080,3.79e-18,40;UBERON:0003528,4.52e-18,29;UBERON:0002791,4.52e-18,29;UBERON:0001893,4.52e-18,29;UBERON:0002780,1.91e-17,39;UBERON:0001890,1.91e-17,39;UBERON:0006240,1.91e-17,39;UBERON:0000956,1.11e-11,21;UBERON:0001869,1.11e-11,21;UBERON:0000203,1.11e-11,21;UBERON:0002619,5.29e-09,17;UBERON:0002420,8.34e-08,8;UBERON:0007245,8.34e-08,8;UBERON:0010009,8.34e-08,8;UBERON:0010011,8.34e-08,8;UBERON:0000454,8.34e-08,8;UBERON:0002021,2.89e-07,10;UBERON:0000411,2.89e-07,10;UBERON:0001950,2.89e-07,10|phase1_expression=2.08193501236232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.6128571499706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0.659058548203415,0,0.139986421625363,0,0,0,0,0.257259436035947,0,0,55.6370267363894,68.2398363260922,71.6229485961982,0,0,0.449949858640699,0,0,0.599200221036809,1.92109152660777,26.0260926894279,30.7813539396255,26.0802952075714,95.978730759678,76.8622522511615,35.3998409731217,26.2616590589968,61.5876587028714,37.4393995397922,36.9016407066192,34.715076515911,40.7528629086299,40.8034890466747,41.152156273984,41.3190838522044,48.3975844627245,36.977175961988,86.031546958311,76.7383359507165,65.4262054846805,1.4387976733305,2.11600368298999,0,0,0,0,0.649776417447669,0,2.38755514223978,0,0,0,2.39433813620357,0,0,0,0.216491041011214,0,0,0.68510327831436,0.258937883647172,4.60170631100957,0.173485326766136,0.608930956624282,1.61430848079241,1.20578112442098,3.88042733547826,2.76466500925286,0.247194967734374,0.144599356919912,0,0.647067399789637,0,0,0,5.27005434620785,6.49284791121711,0,0,0,0,25.6141993382247,17.3850229071078,78.0313526620888,19.468323861535,15.5986428971502,29.298114282898,24.0117069340281,0.916554274652847,1.36847667671102,6.82351447770922,0.841767423545896,0.780722657776222,3.44853156650209,3.96136685571768,5.27466862425003,6.05524842446818,6.53379973452734,7.40243624021858,3.88055056108524,0.215567992932842,0.567318240503458,0.351902248327898,0.657587197282725,0.278047249225598,1.0447564995665,0.205782136407943,0,0,0,0,2.48550927042602,3.51789089971644,3.78130329068131,3.07768156260773,3.93528463494808,4.01094493507183,2.79040733700489,2.41446061259657,2.10177616260905,4.27855609775049,0.985004784474571,0.56748166682099,0.584799949701329,0.878200461164203,0.268412837520744,22.5010244963616,47.6448355316087,0,0,0.426576501070468,0,0.644337306610467,1.00841762311671,0.667134131534611,0.951128130562796,0,0.329397909448022,0.754005626400808,0.596869416123452,0.19496408711912,0,0,0,0.379335801906163,0.342745537829186,0,0.203651327845314,0.193952487167626,0.49095073923223,0.505892296994058,1.18088118383682,0.6279949113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| ||
|EntrezGene=234593 | |||
|HGNC= | |||
|MCL_coexpression_id=87 | |||
|UniProt=Q8BTG7 | |||
|association_with_transcript=-276bp_to_ENSMUST00000041318,uc009mys.2_5end | |||
|description=CAGE_peak_2_at_Ndrg4_5end | |||
|id=chr8:98201645..98201708,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.94e-16!23;CL:0000337!1.94e-16!23;CL:0000540!1.28e-12!33;CL:0000047!1.28e-12!33;CL:0000031!1.28e-12!33;CL:0000404!1.28e-12!33;CL:0000221!2.69e-09!44;CL:0000133!2.69e-09!44;CL:0002319!3.54e-09!43;CL:0000393!1.66e-08!39;CL:0000211!1.66e-08!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.61e-20,23;CL:0000337,2.61e-20,23;CL:0000540,2.61e-12,33;CL:0000047,2.61e-12,33;CL:0000031,2.61e-12,33;CL:0000404,2.61e-12,33;CL:0000221,7.06e-09,44;CL:0000133,7.06e-09,44;CL:0000393,7.93e-09,39;CL:0000211,7.93e-09,39;CL:0002319,1.00e-08,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!5.55e-22!75;UBERON:0001016!5.55e-22!75;UBERON:0001017!9.08e-22!73;UBERON:0005743!9.08e-22!73;UBERON:0002346!3.53e-21!71;UBERON:0003075!3.53e-21!71;UBERON:0007284!3.53e-21!71;UBERON:0001049!1.49e-20!52;UBERON:0005068!1.49e-20!52;UBERON:0006241!1.49e-20!52;UBERON:0007135!1.49e-20!52;UBERON:0004121!1.79e-20!102;UBERON:0000924!1.79e-20!102;UBERON:0006601!1.79e-20!102;UBERON:0000033!1.32e-19!63;UBERON:0000955!6.40e-19!50;UBERON:0006238!6.40e-19!50;UBERON:0002020!1.06e-18!34;UBERON:0002616!3.00e-18!49;UBERON:0003056!4.99e-18!49;UBERON:0003080!1.66e-16!40;UBERON:0002780!6.18e-16!39;UBERON:0001890!6.18e-16!39;UBERON:0006240!6.18e-16!39;UBERON:0002791!5.53e-15!29;UBERON:0003528!5.53e-15!29;UBERON:0001893!5.53e-15!29;UBERON:0000956!6.89e-10!21;UBERON:0001869!6.89e-10!21;UBERON:0000203!6.89e-10!21;UBERON:0007811!1.93e-08!86;UBERON:0000153!4.60e-08!94;UBERON:0002619!9.59e-08!17;UBERON:0000468!1.64e-07!333 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.19e-25,54;UBERON:0001049,6.72e-24,52;UBERON:0005068,6.72e-24,52;UBERON:0006241,6.72e-24,52;UBERON:0007135,6.72e-24,52;UBERON:0002020,9.66e-23,34;UBERON:0002346,1.85e-22,64;UBERON:0003075,1.85e-22,64;UBERON:0007284,1.85e-22,64;UBERON:0001016,1.97e-22,75;UBERON:0001017,3.84e-22,73;UBERON:0010314,5.52e-20,92;UBERON:0000955,1.61e-19,47;UBERON:0006238,1.61e-19,47;UBERON:0004121,8.24e-19,95;UBERON:0000924,8.24e-19,95;UBERON:0006601,8.24e-19,95;UBERON:0003056,9.55e-19,49;UBERON:0002616,1.03e-18,46;UBERON:0010371,1.66e-18,73;UBERON:0003080,3.79e-18,40;UBERON:0003528,4.52e-18,29;UBERON:0002791,4.52e-18,29;UBERON:0001893,4.52e-18,29;UBERON:0002780,1.91e-17,39;UBERON:0001890,1.91e-17,39;UBERON:0006240,1.91e-17,39;UBERON:0000956,1.11e-11,21;UBERON:0001869,1.11e-11,21;UBERON:0000203,1.11e-11,21;UBERON:0002619,5.29e-09,17;UBERON:0002420,8.34e-08,8;UBERON:0007245,8.34e-08,8;UBERON:0010009,8.34e-08,8;UBERON:0010011,8.34e-08,8;UBERON:0000454,8.34e-08,8;UBERON:0002021,2.89e-07,10;UBERON:0000411,2.89e-07,10;UBERON:0001950,2.89e-07,10 | |||
|phase1_expression=2.08193501236232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.6128571499706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0.659058548203415,0,0.139986421625363,0,0,0,0,0.257259436035947,0,0,55.6370267363894,68.2398363260922,71.6229485961982,0,0,0.449949858640699,0,0,0.599200221036809,1.92109152660777,26.0260926894279,30.7813539396255,26.0802952075714,95.978730759678,76.8622522511615,35.3998409731217,26.2616590589968,61.5876587028714,37.4393995397922,36.9016407066192,34.715076515911,40.7528629086299,40.8034890466747,41.152156273984,41.3190838522044,48.3975844627245,36.977175961988,86.031546958311,76.7383359507165,65.4262054846805,1.4387976733305,2.11600368298999,0,0,0,0,0.649776417447669,0,2.38755514223978,0,0,0,2.39433813620357,0,0,0,0.216491041011214,0,0,0.68510327831436,0.258937883647172,4.60170631100957,0.173485326766136,0.608930956624282,1.61430848079241,1.20578112442098,3.88042733547826,2.76466500925286,0.247194967734374,0.144599356919912,0,0.647067399789637,0,0,0,5.27005434620785,6.49284791121711,0,0,0,0,25.6141993382247,17.3850229071078,78.0313526620888,19.468323861535,15.5986428971502,29.298114282898,24.0117069340281,0.916554274652847,1.36847667671102,6.82351447770922,0.841767423545896,0.780722657776222,3.44853156650209,3.96136685571768,5.27466862425003,6.05524842446818,6.53379973452734,7.40243624021858,3.88055056108524,0.215567992932842,0.567318240503458,0.351902248327898,0.657587197282725,0.278047249225598,1.0447564995665,0.205782136407943,0,0,0,0,2.48550927042602,3.51789089971644,3.78130329068131,3.07768156260773,3.93528463494808,4.01094493507183,2.79040733700489,2.41446061259657,2.10177616260905,4.27855609775049,0.985004784474571,0.56748166682099,0.584799949701329,0.878200461164203,0.268412837520744,22.5010244963616,47.6448355316087,0,0,0.426576501070468,0,0.644337306610467,1.00841762311671,0.667134131534611,0.951128130562796,0,0.329397909448022,0.754005626400808,0.596869416123452,0.19496408711912,0,0,0,0.379335801906163,0.342745537829186,0,0.203651327845314,0.193952487167626,0.49095073923223,0.505892296994058,1.18088118383682,0.627994911365499,0.863780147452604,0,0.333690211432188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.757965647081939,0,0.678980343100753,0.234690248288502,0.167506257441816,0.238043640886014,0.195133647857799,0.472905432318573,0.221464689648775,0.159454768657487,0,0,0.144649058581512,0,0,0,0,32.1101179975584,27.3103229759833,0,0,0.315508219416257,0,0.646270193198397,0.238968797952552,0.668396022247182,0.283076530788832,0.809621403349789,1.16902343164525,0.395287777946524,41.1291285019913,0.425820255624806,1.6025904330053,2.11753047159649,0,0,0,0.604647113929502,0.377210159511796,0,0.307435147943927,0.258428293168221,0,1.06949213515416,0,0,0,1.36175842301515,0.720244376125241,0.388076051348264,0.643011105094777,2.12808280370728,3.38900753443934,5.92376474167636,4.87143918583359,3.28540391289194,3.1774810629573,0.882113592219848,0.16488625294148,0.322928853391811,0.361877549568935,0.119372344003136,0,0,22.2510362412612,0,0.412773735926445,0.185194527369712,0.188368457004691,0,0,0,0,0.138199973804424,0,0.316335993581135,0,0.216010681643603,0.627264888043406,0.436725127492355,0.539457385539283,0.909188012978695,0.26175594198403,0,0,3.38215763210514,0.598066184175915,0.496375471371293,13.0282296190512,7.23295011475294,5.57555214119568,4.10750335260139,5.208175393758,10.3810750981454,7.24752362478018,5.47257011889944,0.316011120628178,0.202725215290164,0,0,0.179026695667481,0,0.120195449519969,0.443068581523732,0,0,0,0,0,0.233753804363138,0.226730383615211,0.221985953374065,0.0897138566094757,1.17519231454855,4.056981474676,0.375364950902364,0,0.214368379079066,0,24.8490810751509,21.1749608793301,20.0513429703789,31.4491323688948,10.2762377965596,7.55393897389701,15.5255175053315,15.7612421128477,8.15656336171568,15.5328093525546,0.830298780673413,6.3843979744165,3.92687293234509,8.75184181445858,6.07878171621149,10.6629234901008,6.66740183404846,6.38708677440572,5.45562656306086,7.83361356467772,7.35089969681695,8.29955902098735,8.14681114987977,8.64339557465735,7.63891737109657,8.57328644309533,8.45955579397445,7.33055037762079,9.47797571847605,6.03515572551029,5.48590803816665,7.27650805253284,7.62995807831427,8.43009216467505,6.11710972699649,6.34609559187574,8.41468675214754,7.3659519202596,4.88894809845102,6.73370725989286,6.8808310512021,7.68334962529395,9.41231399290286,7.7468420592983,7.9091710502268,18.2361721894701,5.6143586026898,7.73535794573874,5.35607329792761,2.8676884485537,1.62307484934295 | |||
|short_description=p2@Ndrg4 | |||
}} |
Revision as of 16:34, 14 September 2013
Short description: | p2@Ndrg4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Ndrg4_5end |
Coexpression cluster: | MCL_coexpression_mm9:87 |
Association with transcript: | -276bp_to_ENSMUST00000041318, uc009mys.2_5end |
EntrezGene: | Ndrg4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.61e-20 | 23 |
neuroblast (sensu Vertebrata) | 2.61e-20 | 23 |
neuron | 2.61e-12 | 33 |
neuronal stem cell | 2.61e-12 | 33 |
neuroblast | 2.61e-12 | 33 |
electrically signaling cell | 2.61e-12 | 33 |
ectodermal cell | 7.06e-09 | 44 |
neurectodermal cell | 7.06e-09 | 44 |
electrically responsive cell | 7.93e-09 | 39 |
electrically active cell | 7.93e-09 | 39 |
neural cell | 1.00e-08 | 43 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.