FFCP PHASE1:Mm9::chr7:86681027..86681052,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=443|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr7:86681027..86681052,+|id=chr7:86681027..86681052,+|ontology_enrichment_celltype=CL:0000117!6.32e-19!23;CL:0000337!6.32e-19!23;CL:0002319!1.23e-16!43;CL:0000221!5.68e-16!44;CL:0000133!5.68e-16!44;CL:0000055!1.39e-12!50;CL:0000540!1.81e-10!33;CL:0000047!1.81e-10!33;CL:0000031!1.81e-10!33;CL:0000404!1.81e-10!33;CL:0000333!9.89e-08!10;CL:0000095!9.89e-08!10;CL:0000243!9.89e-08!10;CL:0000123!9.89e-08!10;CL:0000125!9.89e-08!10;CL:0000030!9.89e-08!10;CL:0000339!9.89e-08!10;CL:0002453!1.14e-07!8;CL:0000393!1.26e-07!39;CL:0000211!1.26e-07!39;CL:0002609!1.50e-07!6|ontology_enrichment_celltype_v019_2=CL:0000117,7.87e-22,23;CL:0000337,7.87e-22,23;CL:0002319,1.14e-17,43;CL:0000221,4.83e-17,44;CL:0000133,4.83e-17,44;CL:0000540,6.15e-13,33;CL:0000047,6.15e-13,33;CL:0000031,6.15e-13,33;CL:0000404,6.15e-13,33;CL:0000393,7.18e-10,39;CL:0000211,7.18e-10,39;CL:0002609,4.56e-09,6;CL:0002453,1.20e-07,8;CL:0002321,2.45e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!2.10e-34!75;UBERON:0001016!2.10e-34!75;UBERON:0001017!7.18e-34!73;UBERON:0005743!7.18e-34!73;UBERON:0001049!4.48e-33!52;UBERON:0005068!4.48e-33!52;UBERON:0006241!4.48e-33!52;UBERON:0007135!4.48e-33!52;UBERON:0000955!2.93e-30!50;UBERON:0006238!2.93e-30!50;UBERON:0002616!2.55e-29!49;UBERON:0002020!2.17e-28!34;UBERON:0000033!5.62e-25!63;UBERON:0002346!1.94e-24!71;UBERON:0003075!1.94e-24!71;UBERON:0007284!1.94e-24!71;UBERON:0002791!7.46e-24!29;UBERON:0003528!7.46e-24!29;UBERON:0001893!7.46e-24!29;UBERON:0003080!7.92e-24!40;UBERON:0004121!8.06e-24!102;UBERON:0000924!8.06e-24!102;UBERON:0006601!8.06e-24!102;UBERON:0002780!3.12e-23!39;UBERON:0001890!3.12e-23!39;UBERON:0006240!3.12e-23!39;UBERON:0003056!1.45e-21!49;UBERON:0000956!3.60e-19!21;UBERON:0001869!3.60e-19!21;UBERON:0000203!3.60e-19!21;UBERON:0002619!3.20e-15!17;UBERON:0007811!1.78e-13!86;UBERON:0000153!1.83e-11!94;UBERON:0003076!1.76e-09!12;UBERON:0003057!1.76e-09!12;UBERON:0002021!6.26e-09!10;UBERON:0000411!6.26e-09!10;UBERON:0001950!6.26e-09!10;UBERON:0001954!9.45e-08!7;UBERON:0003022!9.45e-08!7;UBERON:0002421!9.45e-08!7;UBERON:0000349!9.45e-08!7;UBERON:0002600!9.45e-08!7|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.78e-36,73;UBERON:0001016,4.92e-35,75;UBERON:0000073,2.19e-34,54;UBERON:0002020,1.20e-33,34;UBERON:0001049,3.49e-33,52;UBERON:0005068,3.49e-33,52;UBERON:0006241,3.49e-33,52;UBERON:0007135,3.49e-33,52;UBERON:0003528,5.52e-28,29;UBERON:0002791,5.52e-28,29;UBERON:0001893,5.52e-28,29;UBERON:0000955,7.20e-28,47;UBERON:0006238,7.20e-28,47;UBERON:0002616,8.89e-27,46;UBERON:0002346,2.97e-24,64;UBERON:0003075,2.97e-24,64;UBERON:0007284,2.97e-24,64;UBERON:0004121,5.27e-24,95;UBERON:0000924,5.27e-24,95;UBERON:0006601,5.27e-24,95;UBERON:0000956,1.26e-23,21;UBERON:0001869,1.26e-23,21;UBERON:0000203,1.26e-23,21;UBERON:0003080,1.91e-23,40;UBERON:0002780,1.01e-22,39;UBERON:0001890,1.01e-22,39;UBERON:0006240,1.01e-22,39;UBERON:0010371,1.57e-19,73;UBERON:0002619,1.13e-18,17;UBERON:0003056,3.68e-17,49;UBERON:0010314,1.00e-12,92;UBERON:0002021,8.59e-11,10;UBERON:0000411,8.59e-11,10;UBERON:0001950,8.59e-11,10;UBERON:0003076,5.32e-10,12;UBERON:0003057,5.32e-10,12;UBERON:0001954,2.56e-09,7;UBERON:0003022,2.56e-09,7;UBERON:0002421,2.56e-09,7;UBERON:0000349,2.56e-09,7;UBERON:0002600,2.56e-09,7;UBERON:0000025,6.94e-08,114;UBERON:0002240,1.90e-07,6;UBERON:0005174,1.90e-07,6;UBERON:0001137,1.90e-07,6|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,18.0960879795771,14.2796018777407,6.61061656852564,3.21968769738334,10.062679505548,0,0,0,0,0,0,9.71119012126069,16.398720357433,8.23980824558033,0.677689064138264,2.66788438833342,0,0,0,8.08920298399693,9.60545763303886,22.3969562586312,19.3058491814318,24.8183454394631,9.14083150092171,9.718215801871,18.618601480673,24.4405951096503,12.8690630125403,1.10115880999389,1.78762273319263,1.53606533256243,5.53922408466814,6.12967212136145,6.77187381723788,0.279182999001381,1.12552522006336,2.44477196442896,6.77645746589436,7.54569908235246,7.26957838718672,0.075726193333184,0.226714680320357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0,0,0,0,0,0,0,0,0,0,0,1.17112318804619,1.8850203613211,0,0,0,0,1.64769703345305,1.37250180845588,7.53926112677186,7.47444576826789,7.92717917724025,1.24672826735736,2.43361894601636,0,0,0,0,0,0.229902104433473,0,0.150704817835715,0.136072998302656,0.2562274405697,0.374806898238915,0,0,0,0,0,0,0,0.205782136407943,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.36463917702604,11.0107935245834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.56880943980467,2.10981035865966,0,0,0,0,0,0,0,0,0,0,0,8.03303291054518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.8006109403131,0.646793418913773,0.6430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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=443 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr7:86681027..86681052,+ | |||
|id=chr7:86681027..86681052,+ | |||
|ontology_enrichment_celltype=CL:0000117!6.32e-19!23;CL:0000337!6.32e-19!23;CL:0002319!1.23e-16!43;CL:0000221!5.68e-16!44;CL:0000133!5.68e-16!44;CL:0000055!1.39e-12!50;CL:0000540!1.81e-10!33;CL:0000047!1.81e-10!33;CL:0000031!1.81e-10!33;CL:0000404!1.81e-10!33;CL:0000333!9.89e-08!10;CL:0000095!9.89e-08!10;CL:0000243!9.89e-08!10;CL:0000123!9.89e-08!10;CL:0000125!9.89e-08!10;CL:0000030!9.89e-08!10;CL:0000339!9.89e-08!10;CL:0002453!1.14e-07!8;CL:0000393!1.26e-07!39;CL:0000211!1.26e-07!39;CL:0002609!1.50e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,7.87e-22,23;CL:0000337,7.87e-22,23;CL:0002319,1.14e-17,43;CL:0000221,4.83e-17,44;CL:0000133,4.83e-17,44;CL:0000540,6.15e-13,33;CL:0000047,6.15e-13,33;CL:0000031,6.15e-13,33;CL:0000404,6.15e-13,33;CL:0000393,7.18e-10,39;CL:0000211,7.18e-10,39;CL:0002609,4.56e-09,6;CL:0002453,1.20e-07,8;CL:0002321,2.45e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.10e-34!75;UBERON:0001016!2.10e-34!75;UBERON:0001017!7.18e-34!73;UBERON:0005743!7.18e-34!73;UBERON:0001049!4.48e-33!52;UBERON:0005068!4.48e-33!52;UBERON:0006241!4.48e-33!52;UBERON:0007135!4.48e-33!52;UBERON:0000955!2.93e-30!50;UBERON:0006238!2.93e-30!50;UBERON:0002616!2.55e-29!49;UBERON:0002020!2.17e-28!34;UBERON:0000033!5.62e-25!63;UBERON:0002346!1.94e-24!71;UBERON:0003075!1.94e-24!71;UBERON:0007284!1.94e-24!71;UBERON:0002791!7.46e-24!29;UBERON:0003528!7.46e-24!29;UBERON:0001893!7.46e-24!29;UBERON:0003080!7.92e-24!40;UBERON:0004121!8.06e-24!102;UBERON:0000924!8.06e-24!102;UBERON:0006601!8.06e-24!102;UBERON:0002780!3.12e-23!39;UBERON:0001890!3.12e-23!39;UBERON:0006240!3.12e-23!39;UBERON:0003056!1.45e-21!49;UBERON:0000956!3.60e-19!21;UBERON:0001869!3.60e-19!21;UBERON:0000203!3.60e-19!21;UBERON:0002619!3.20e-15!17;UBERON:0007811!1.78e-13!86;UBERON:0000153!1.83e-11!94;UBERON:0003076!1.76e-09!12;UBERON:0003057!1.76e-09!12;UBERON:0002021!6.26e-09!10;UBERON:0000411!6.26e-09!10;UBERON:0001950!6.26e-09!10;UBERON:0001954!9.45e-08!7;UBERON:0003022!9.45e-08!7;UBERON:0002421!9.45e-08!7;UBERON:0000349!9.45e-08!7;UBERON:0002600!9.45e-08!7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.78e-36,73;UBERON:0001016,4.92e-35,75;UBERON:0000073,2.19e-34,54;UBERON:0002020,1.20e-33,34;UBERON:0001049,3.49e-33,52;UBERON:0005068,3.49e-33,52;UBERON:0006241,3.49e-33,52;UBERON:0007135,3.49e-33,52;UBERON:0003528,5.52e-28,29;UBERON:0002791,5.52e-28,29;UBERON:0001893,5.52e-28,29;UBERON:0000955,7.20e-28,47;UBERON:0006238,7.20e-28,47;UBERON:0002616,8.89e-27,46;UBERON:0002346,2.97e-24,64;UBERON:0003075,2.97e-24,64;UBERON:0007284,2.97e-24,64;UBERON:0004121,5.27e-24,95;UBERON:0000924,5.27e-24,95;UBERON:0006601,5.27e-24,95;UBERON:0000956,1.26e-23,21;UBERON:0001869,1.26e-23,21;UBERON:0000203,1.26e-23,21;UBERON:0003080,1.91e-23,40;UBERON:0002780,1.01e-22,39;UBERON:0001890,1.01e-22,39;UBERON:0006240,1.01e-22,39;UBERON:0010371,1.57e-19,73;UBERON:0002619,1.13e-18,17;UBERON:0003056,3.68e-17,49;UBERON:0010314,1.00e-12,92;UBERON:0002021,8.59e-11,10;UBERON:0000411,8.59e-11,10;UBERON:0001950,8.59e-11,10;UBERON:0003076,5.32e-10,12;UBERON:0003057,5.32e-10,12;UBERON:0001954,2.56e-09,7;UBERON:0003022,2.56e-09,7;UBERON:0002421,2.56e-09,7;UBERON:0000349,2.56e-09,7;UBERON:0002600,2.56e-09,7;UBERON:0000025,6.94e-08,114;UBERON:0002240,1.90e-07,6;UBERON:0005174,1.90e-07,6;UBERON:0001137,1.90e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,18.0960879795771,14.2796018777407,6.61061656852564,3.21968769738334,10.062679505548,0,0,0,0,0,0,9.71119012126069,16.398720357433,8.23980824558033,0.677689064138264,2.66788438833342,0,0,0,8.08920298399693,9.60545763303886,22.3969562586312,19.3058491814318,24.8183454394631,9.14083150092171,9.718215801871,18.618601480673,24.4405951096503,12.8690630125403,1.10115880999389,1.78762273319263,1.53606533256243,5.53922408466814,6.12967212136145,6.77187381723788,0.279182999001381,1.12552522006336,2.44477196442896,6.77645746589436,7.54569908235246,7.26957838718672,0.075726193333184,0.226714680320357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0,0,0,0,0,0,0,0,0,0,0,1.17112318804619,1.8850203613211,0,0,0,0,1.64769703345305,1.37250180845588,7.53926112677186,7.47444576826789,7.92717917724025,1.24672826735736,2.43361894601636,0,0,0,0,0,0.229902104433473,0,0.150704817835715,0.136072998302656,0.2562274405697,0.374806898238915,0,0,0,0,0,0,0,0.205782136407943,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.36463917702604,11.0107935245834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.56880943980467,2.10981035865966,0,0,0,0,0,0,0,0,0,0,0,8.03303291054518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.8006109403131,0.646793418913773,0.643011105094777,0,0.356737635204141,0.329098041204242,0,0,0,0,0,0,0,0,0,0,2.78137953015765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149516546043979,0,0.194451188344048,0.129159823477731,0.168956125490778,0.117357238645754,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.0827665835536,8.74617949363636,4.01026859407578,4.46818274093588,6.16574267793578,6.7985450765073,7.42524750254986,5.85417564191487,5.43770890781046,8.28416498802912,7.5764763736449,9.97562183502578,4.78054096111576,1.45864030240976,2.93458427679175,1.47074806760011,1.11123363900808,1.64828045791115,1.28367683836726,1.76888048234658,1.2673964994512,1.13175804831646,1.31098110457835,0.960377286073039,1.43588672389033,1.90517476513229,1.27472758539341,1.15745532278223,0.824171801606613,1.47198920134397,3.08582327146874,1.4198064492747,1.1921809497366,1.0174249164263,1.31753132581463,1.18460451048347,1.64635175585495,1.05227884575137,1.35804113845862,1.12228454331548,0.830445126869219,0.985044823755635,1.63692417267876,1.39443157067369,0.578719832943424,1.99848462350357,0.467863216890817,0.429742108096597,0.765153328275374,0.661774257358546,0 | |||
|short_description=p@chr7:86681027..86681052,+ | |||
}} |
Revision as of 14:16, 14 September 2013
Short description: | p@chr7:86681027..86681052, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:86681027..86681052, + |
Coexpression cluster: | MCL_coexpression_mm9:443 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 7.87e-22 | 23 |
neuroblast (sensu Vertebrata) | 7.87e-22 | 23 |
neural cell | 1.14e-17 | 43 |
ectodermal cell | 4.83e-17 | 44 |
neurectodermal cell | 4.83e-17 | 44 |
neuron | 6.15e-13 | 33 |
neuronal stem cell | 6.15e-13 | 33 |
neuroblast | 6.15e-13 | 33 |
electrically signaling cell | 6.15e-13 | 33 |
electrically responsive cell | 7.18e-10 | 39 |
electrically active cell | 7.18e-10 | 39 |
neuron of cerebral cortex | 4.56e-09 | 6 |
oligodendrocyte precursor cell | 1.20e-07 | 8 |
embryonic cell | 2.45e-07 | 70 |
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