FFCP PHASE1:Hg19::chr1:190446762..190446774,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=339479|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=22393|TSSclassifier=S|UniProt=Q76B58|association_with_transcript=-3bp_to_ENST00000367462,NM_199051,uc001gse.1_5end|coexpression_cluster_id=C1254|description=CAGE_peak_4_at_FAM5C_5end|id=chr1:190446762..190446774,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006601;3.45e-07;82|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.49e-65!57;UBERON:0005068!1.49e-65!57;UBERON:0006241!1.49e-65!57;UBERON:0007135!1.49e-65!57;UBERON:0001017!4.02e-57!82;UBERON:0002616!3.73e-56!59;UBERON:0000955!1.10e-54!69;UBERON:0006238!1.10e-54!69;UBERON:0005743!6.05e-54!86;UBERON:0002780!1.04e-51!41;UBERON:0001890!1.04e-51!41;UBERON:0006240!1.04e-51!41;UBERON:0001893!1.78e-51!34;UBERON:0002020!2.98e-51!34;UBERON:0003528!2.98e-51!34;UBERON:0001869!5.56e-51!32;UBERON:0003080!2.69e-50!42;UBERON:0000073!5.48e-50!94;UBERON:0001016!5.48e-50!94;UBERON:0002619!1.69e-49!22;UBERON:0002791!5.64e-49!33;UBERON:0000956!3.91e-47!25;UBERON:0000203!3.91e-47!25;UBERON:0003075!6.92e-47!86;UBERON:0007284!6.92e-47!86;UBERON:0001950!1.42e-44!20;UBERON:0002346!2.70e-44!90;UBERON:0003056!3.59e-32!61;UBERON:0007023!1.62e-30!115;UBERON:0000033!9.35e-28!123;UBERON:0000153!5.90e-26!129;UBERON:0007811!5.90e-26!129;UBERON:0004121!2.32e-25!169;UBERON:0000924!1.72e-24!173;UBERON:0006601!1.72e-24!173;UBERON:0000025!2.00e-19!194;UBERON:0001871!2.19e-16!7;UBERON:0003076!9.85e-16!15;UBERON:0003057!9.85e-16!15;UBERON:0002021!1.39e-14!5;UBERON:0001872!3.34e-14!5;UBERON:0004111!3.97e-14!241;UBERON:0000349!4.04e-14!5;UBERON:0000477!6.43e-13!286;UBERON:0004733!9.86e-13!12;UBERON:0002028!9.86e-13!12;UBERON:0007277!9.86e-13!12;UBERON:0000200!1.08e-11!6;UBERON:0004732!1.21e-11!13;UBERON:0000483!2.41e-10!309;UBERON:0000119!3.98e-10!312;UBERON:0002680!4.85e-10!9;UBERON:0001895!4.85e-10!9;UBERON:0010092!4.85e-10!9;UBERON:0000064!5.23e-10!219;UBERON:0000481!9.61e-10!347;UBERON:0002771!5.89e-09!3;UBERON:0000988!1.62e-08!3;UBERON:0000475!3.03e-08!365;UBERON:0002298!6.05e-08!8;UBERON:0000062!1.89e-07!511;UBERON:0002420!2.17e-07!9;UBERON:0007245!2.17e-07!9;UBERON:0010009!2.17e-07!9;UBERON:0010011!2.17e-07!9;UBERON:0000454!2.17e-07!9;UBERON:0002308!3.24e-07!9;UBERON:0000125!3.24e-07!9|ontology_enrichment_uberon_v019=UBERON:0002619;5.83e-52;22!UBERON:0001950;1.15e-48;20!UBERON:0000956;1.05e-45;25!UBERON:0000203;1.05e-45;25!UBERON:0001869;8.97e-41;32!UBERON:0001893;4.97e-37;34!UBERON:0002791;8.15e-35;32!UBERON:0003528;2.70e-34;34!UBERON:0002020;2.70e-34;34!UBERON:0002780;1.67e-28;41!UBERON:0001890;1.67e-28;41!UBERON:0002021;3.21e-24;5!UBERON:0001872;1.55e-23;5!UBERON:0000073;1.64e-20;53!UBERON:0002616;1.64e-20;53!UBERON:0000955;4.77e-19;68!UBERON:0001017;1.02e-15;75!UBERON:0001016;5.68e-14;83!UBERON:0000200;1.59e-11;6!UBERON:0002902;5.07e-09;1!UBERON:0001882;5.07e-09;1!UBERON:0002022;5.07e-09;1!UBERON:0009899;5.07e-09;1!UBERON:0005403;5.07e-09;1!UBERON:0002581;1.22e-08;1!UBERON:0003112;1.22e-08;1!UBERON:0011158;1.22e-08;1!UBERON:0007190;1.22e-08;1!UBERON:0003128;1.22e-08;1!UBERON:0001703;1.22e-08;1!UBERON:0002241;1.22e-08;1!UBERON:0011216;5.27e-08;132!UBERON:0000349;6.74e-07;5|ontology_enrichment_uberon_v019_2=UBERON:0002619,1.06e-51,22;UBERON:0001950,1.56e-48,20;UBERON:0001869,1.77e-47,32;UBERON:0000956,1.78e-45,25;UBERON:0000203,1.78e-45,25;UBERON:0001893,1.30e-44,34;UBERON:0002791,3.21e-41,32;UBERON:0003528,1.01e-38,34;UBERON:0002020,1.01e-38,34;UBERON:0001049,2.15e-38,56;UBERON:0005068,2.15e-38,56;UBERON:0006241,2.15e-38,56;UBERON:0007135,2.15e-38,56;UBERON:0000955,2.36e-38,68;UBERON:0006238,2.36e-38,68;UBERON:0002780,1.01e-36,41;UBERON:0001890,1.01e-36,41;UBERON:0003080,1.01e-36,41;UBERON:0006240,1.01e-36,41;UBERON:0000073,3.95e-36,53;UBERON:0002616,3.95e-36,53;UBERON:0001017,2.75e-35,81;UBERON:0001016,1.79e-31,89;UBERON:0003075,2.47e-25,82;UBERON:0007284,2.47e-25,82;UBERON:0002021,3.32e-24,5;UBERON:0002346,5.13e-24,86;UBERON:0003056,5.49e-24,61;UBERON:0001872,2.80e-23,5;UBERON:0010371,2.52e-19,104;UBERON:0010314,1.65e-18,132;UBERON:0007023,1.66e-17,114;UBERON:0004121,7.43e-15,171;UBERON:0000924,7.43e-15,171;UBERON:0006601,7.43e-15,171;UBERON:0011216,1.20e-14,223;UBERON:0000200,1.32e-11,6;UBERON:0002022,5.28e-09,1;UBERON:0000025,5.64e-09,192;UBERON:0001882,5.70e-09,1;UBERON:0005403,5.70e-09,1;UBERON:0002902,6.16e-09,1;UBERON:0009899,6.16e-09,1;UBERON:0007190,9.02e-09,1;UBERON:0003112,9.74e-09,1;UBERON:0011158,9.74e-09,1;UBERON:0003128,9.74e-09,1;UBERON:0001703,9.74e-09,1;UBERON:0002241,9.74e-09,1;UBERON:0004761,9.74e-09,1;UBERON:0009617,9.74e-09,1;UBERON:0002581,1.22e-08,1;UBERON:0000349,8.66e-07,5|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=339479 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=22393 | |||
|TSSclassifier=S | |||
|UniProt=Q76B58 | |||
|association_with_transcript=-3bp_to_ENST00000367462,NM_199051,uc001gse.1_5end | |||
|coexpression_cluster_id=C1254 | |||
|description=CAGE_peak_4_at_FAM5C_5end | |||
|id=chr1:190446762..190446774,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.45e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.49e-65!57;UBERON:0005068!1.49e-65!57;UBERON:0006241!1.49e-65!57;UBERON:0007135!1.49e-65!57;UBERON:0001017!4.02e-57!82;UBERON:0002616!3.73e-56!59;UBERON:0000955!1.10e-54!69;UBERON:0006238!1.10e-54!69;UBERON:0005743!6.05e-54!86;UBERON:0002780!1.04e-51!41;UBERON:0001890!1.04e-51!41;UBERON:0006240!1.04e-51!41;UBERON:0001893!1.78e-51!34;UBERON:0002020!2.98e-51!34;UBERON:0003528!2.98e-51!34;UBERON:0001869!5.56e-51!32;UBERON:0003080!2.69e-50!42;UBERON:0000073!5.48e-50!94;UBERON:0001016!5.48e-50!94;UBERON:0002619!1.69e-49!22;UBERON:0002791!5.64e-49!33;UBERON:0000956!3.91e-47!25;UBERON:0000203!3.91e-47!25;UBERON:0003075!6.92e-47!86;UBERON:0007284!6.92e-47!86;UBERON:0001950!1.42e-44!20;UBERON:0002346!2.70e-44!90;UBERON:0003056!3.59e-32!61;UBERON:0007023!1.62e-30!115;UBERON:0000033!9.35e-28!123;UBERON:0000153!5.90e-26!129;UBERON:0007811!5.90e-26!129;UBERON:0004121!2.32e-25!169;UBERON:0000924!1.72e-24!173;UBERON:0006601!1.72e-24!173;UBERON:0000025!2.00e-19!194;UBERON:0001871!2.19e-16!7;UBERON:0003076!9.85e-16!15;UBERON:0003057!9.85e-16!15;UBERON:0002021!1.39e-14!5;UBERON:0001872!3.34e-14!5;UBERON:0004111!3.97e-14!241;UBERON:0000349!4.04e-14!5;UBERON:0000477!6.43e-13!286;UBERON:0004733!9.86e-13!12;UBERON:0002028!9.86e-13!12;UBERON:0007277!9.86e-13!12;UBERON:0000200!1.08e-11!6;UBERON:0004732!1.21e-11!13;UBERON:0000483!2.41e-10!309;UBERON:0000119!3.98e-10!312;UBERON:0002680!4.85e-10!9;UBERON:0001895!4.85e-10!9;UBERON:0010092!4.85e-10!9;UBERON:0000064!5.23e-10!219;UBERON:0000481!9.61e-10!347;UBERON:0002771!5.89e-09!3;UBERON:0000988!1.62e-08!3;UBERON:0000475!3.03e-08!365;UBERON:0002298!6.05e-08!8;UBERON:0000062!1.89e-07!511;UBERON:0002420!2.17e-07!9;UBERON:0007245!2.17e-07!9;UBERON:0010009!2.17e-07!9;UBERON:0010011!2.17e-07!9;UBERON:0000454!2.17e-07!9;UBERON:0002308!3.24e-07!9;UBERON:0000125!3.24e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;5.83e-52;22!UBERON:0001950;1.15e-48;20!UBERON:0000956;1.05e-45;25!UBERON:0000203;1.05e-45;25!UBERON:0001869;8.97e-41;32!UBERON:0001893;4.97e-37;34!UBERON:0002791;8.15e-35;32!UBERON:0003528;2.70e-34;34!UBERON:0002020;2.70e-34;34!UBERON:0002780;1.67e-28;41!UBERON:0001890;1.67e-28;41!UBERON:0002021;3.21e-24;5!UBERON:0001872;1.55e-23;5!UBERON:0000073;1.64e-20;53!UBERON:0002616;1.64e-20;53!UBERON:0000955;4.77e-19;68!UBERON:0001017;1.02e-15;75!UBERON:0001016;5.68e-14;83!UBERON:0000200;1.59e-11;6!UBERON:0002902;5.07e-09;1!UBERON:0001882;5.07e-09;1!UBERON:0002022;5.07e-09;1!UBERON:0009899;5.07e-09;1!UBERON:0005403;5.07e-09;1!UBERON:0002581;1.22e-08;1!UBERON:0003112;1.22e-08;1!UBERON:0011158;1.22e-08;1!UBERON:0007190;1.22e-08;1!UBERON:0003128;1.22e-08;1!UBERON:0001703;1.22e-08;1!UBERON:0002241;1.22e-08;1!UBERON:0011216;5.27e-08;132!UBERON:0000349;6.74e-07;5 | |||
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|short_description=p4@FAM5C | |||
}} |
Revision as of 02:26, 12 September 2013
Short description: | p4@FAM5C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_FAM5C_5end |
Coexpression cluster: | C1254_leiomyoblastoma_occipital_rhabdomyosarcoma_parietal_temporal_brain_medial |
Association with transcript: | -3bp_to_ENST00000367462, NM_199051, uc001gse.1_5end |
EntrezGene: | FAM5C |
HGNC: | 22393 |
UniProt: | Q76B58 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.