FFCP PHASE1:Hg19::chr1:208084668..208084701,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=947|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=1662|TSSclassifier=S|UniProt=P28906|association_with_transcript=0bp_to_NM_001025109,NM_001773,uc001hgw.1,uc001hgx.1,uc010psj.1_5end|coexpression_cluster_id=C3929|description=CAGE_peak_2_at_CD34_5end|id=chr1:208084668..208084701,-|ontology_enrichment_celltype=CL:0000115!6.74e-10!35;CL:0002139!3.53e-09!24;CL:0002078!2.01e-08!44|ontology_enrichment_celltype_v019=CL:0000115;2.04e-07;36|ontology_enrichment_celltype_v019_2=CL:0000115,1.44e-08,36|ontology_enrichment_development_v019=UBERON:0006601;4.96e-08;82!UBERON:0004872;5.83e-07;7|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!2.08e-62!115;UBERON:0001049!6.45e-29!57;UBERON:0005068!6.45e-29!57;UBERON:0006241!6.45e-29!57;UBERON:0007135!6.45e-29!57;UBERON:0003080!2.78e-24!42;UBERON:0002780!1.54e-23!41;UBERON:0001890!1.54e-23!41;UBERON:0006240!1.54e-23!41;UBERON:0002616!2.99e-23!59;UBERON:0003075!2.34e-22!86;UBERON:0007284!2.34e-22!86;UBERON:0004111!8.47e-21!241;UBERON:0002346!1.67e-20!90;UBERON:0000955!3.03e-20!69;UBERON:0006238!3.03e-20!69;UBERON:0000025!3.48e-20!194;UBERON:0002020!5.72e-20!34;UBERON:0003528!5.72e-20!34;UBERON:0001893!8.95e-20!34;UBERON:0001017!2.32e-19!82;UBERON:0002791!2.97e-19!33;UBERON:0005743!1.06e-18!86;UBERON:0001869!1.65e-18!32;UBERON:0000477!4.74e-18!286;UBERON:0000073!3.74e-16!94;UBERON:0001016!3.74e-16!94;UBERON:0000956!9.70e-15!25;UBERON:0000203!9.70e-15!25;UBERON:0003056!1.48e-14!61;UBERON:0002619!3.29e-13!22;UBERON:0001950!3.55e-12!20;UBERON:0000153!4.56e-11!129;UBERON:0007811!4.56e-11!129;UBERON:0000483!1.01e-10!309;UBERON:0000064!2.32e-10!219;UBERON:0000119!2.43e-10!312;UBERON:0000033!8.12e-10!123;UBERON:0003103!2.58e-08!69;UBERON:0004121!2.50e-07!169;UBERON:0000467!2.52e-07!625;UBERON:0000480!3.06e-07!626;UBERON:0000468!5.19e-07!659;UBERON:0000062!6.77e-07!511;UBERON:0000924!8.45e-07!173;UBERON:0006601!8.45e-07!173|ontology_enrichment_uberon_v019=UBERON:0007023;1.22e-16;114!UBERON:0002780;2.99e-14;41!UBERON:0001890;2.99e-14;41!UBERON:0000073;5.78e-14;53!UBERON:0002616;5.78e-14;53!UBERON:0001893;7.34e-13;34!UBERON:0000956;1.75e-12;25!UBERON:0000203;1.75e-12;25!UBERON:0003528;1.95e-12;34!UBERON:0002020;1.95e-12;34!UBERON:0002791;3.48e-12;32!UBERON:0001869;4.10e-12;32!UBERON:0001950;6.42e-12;20!UBERON:0002619;7.51e-12;22!UBERON:0001017;1.44e-08;75!UBERON:0000955;1.45e-08;68!UBERON:0001016;3.74e-07;83|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.54e-64,114;UBERON:0001049,3.20e-24,56;UBERON:0005068,3.20e-24,56;UBERON:0006241,3.20e-24,56;UBERON:0007135,3.20e-24,56;UBERON:0000073,5.73e-22,53;UBERON:0002616,5.73e-22,53;UBERON:0002780,3.84e-19,41;UBERON:0001890,3.84e-19,41;UBERON:0003080,3.84e-19,41;UBERON:0006240,3.84e-19,41;UBERON:0003075,7.41e-19,82;UBERON:0007284,7.41e-19,82;UBERON:0002346,2.52e-17,86;UBERON:0001017,3.35e-17,81;UBERON:0000955,3.76e-17,68;UBERON:0006238,3.76e-17,68;UBERON:0001016,4.71e-15,89;UBERON:0003528,5.47e-15,34;UBERON:0002020,5.47e-15,34;UBERON:0001893,8.36e-15,34;UBERON:0004111,2.45e-14,240;UBERON:0010314,6.64e-14,132;UBERON:0002791,1.57e-13,32;UBERON:0001869,2.10e-13,32;UBERON:0010371,6.34e-13,104;UBERON:0000025,1.24e-12,192;UBERON:0000956,1.59e-12,25;UBERON:0000203,1.59e-12,25;UBERON:0001950,6.57e-12,20;UBERON:0002619,6.91e-12,22;UBERON:0003056,8.48e-12,61;UBERON:0011216,1.42e-10,223;UBERON:0003103,1.64e-07,68;UBERON:0004121,5.02e-07,171;UBERON:0000924,5.02e-07,171;UBERON:0006601,5.02e-07,171|phase1_expression=0,0,1.9733616573436,0,0.446961094427288,1.74467704820074,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0.572471974262113,3.96935832711364,1.38096903554283,0,0,0,0,0,0.154816123316076,0,0,0,0,0,35.5256531595165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,29.0776922873857,6.72610275577843,8.95505888235262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,0.670700859703636,0.767175371061182,0,0,0,0,0,0,0,0,5.76307932189936,0,0,0.324547393654683,0.348259474598534,0.930705723632056,0,0,0,2.18638648103376,0,0.347140501607594,0,1.67799774483962,3.02629846134074,2.71693456497854,2.84258435086262,6.40379272836078,13.0541038978221,4.02829317109147,0.760272105718513,7.32186172644509,0,0.81014194788176,5.26868396876071,2.2452937262617,3.60356737546631,0,0,0.366403487860815,0,0,0,0,0.25326102332916,0,0.286836620748814,0,0,0,0,0.311211035399766,0.404132016209064,0.653847612453835,0,0,0,0.312160076830321,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.484938170456436,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.59602091012043,7.01208869017229,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,7.79578817909799,0.925971025153221,1.71228737011138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37872730027914,0,0,0,0,0,0,0,0,0,0,0,0,0.84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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=947 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1662 | |||
|TSSclassifier=S | |||
|UniProt=P28906 | |||
|association_with_transcript=0bp_to_NM_001025109,NM_001773,uc001hgw.1,uc001hgx.1,uc010psj.1_5end | |||
|coexpression_cluster_id=C3929 | |||
|description=CAGE_peak_2_at_CD34_5end | |||
|id=chr1:208084668..208084701,- | |||
|ontology_enrichment_celltype=CL:0000115!6.74e-10!35;CL:0002139!3.53e-09!24;CL:0002078!2.01e-08!44 | |||
|ontology_enrichment_celltype_v019=CL:0000115;2.04e-07;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,1.44e-08,36 | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.96e-08;82!UBERON:0004872;5.83e-07;7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.08e-62!115;UBERON:0001049!6.45e-29!57;UBERON:0005068!6.45e-29!57;UBERON:0006241!6.45e-29!57;UBERON:0007135!6.45e-29!57;UBERON:0003080!2.78e-24!42;UBERON:0002780!1.54e-23!41;UBERON:0001890!1.54e-23!41;UBERON:0006240!1.54e-23!41;UBERON:0002616!2.99e-23!59;UBERON:0003075!2.34e-22!86;UBERON:0007284!2.34e-22!86;UBERON:0004111!8.47e-21!241;UBERON:0002346!1.67e-20!90;UBERON:0000955!3.03e-20!69;UBERON:0006238!3.03e-20!69;UBERON:0000025!3.48e-20!194;UBERON:0002020!5.72e-20!34;UBERON:0003528!5.72e-20!34;UBERON:0001893!8.95e-20!34;UBERON:0001017!2.32e-19!82;UBERON:0002791!2.97e-19!33;UBERON:0005743!1.06e-18!86;UBERON:0001869!1.65e-18!32;UBERON:0000477!4.74e-18!286;UBERON:0000073!3.74e-16!94;UBERON:0001016!3.74e-16!94;UBERON:0000956!9.70e-15!25;UBERON:0000203!9.70e-15!25;UBERON:0003056!1.48e-14!61;UBERON:0002619!3.29e-13!22;UBERON:0001950!3.55e-12!20;UBERON:0000153!4.56e-11!129;UBERON:0007811!4.56e-11!129;UBERON:0000483!1.01e-10!309;UBERON:0000064!2.32e-10!219;UBERON:0000119!2.43e-10!312;UBERON:0000033!8.12e-10!123;UBERON:0003103!2.58e-08!69;UBERON:0004121!2.50e-07!169;UBERON:0000467!2.52e-07!625;UBERON:0000480!3.06e-07!626;UBERON:0000468!5.19e-07!659;UBERON:0000062!6.77e-07!511;UBERON:0000924!8.45e-07!173;UBERON:0006601!8.45e-07!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;1.22e-16;114!UBERON:0002780;2.99e-14;41!UBERON:0001890;2.99e-14;41!UBERON:0000073;5.78e-14;53!UBERON:0002616;5.78e-14;53!UBERON:0001893;7.34e-13;34!UBERON:0000956;1.75e-12;25!UBERON:0000203;1.75e-12;25!UBERON:0003528;1.95e-12;34!UBERON:0002020;1.95e-12;34!UBERON:0002791;3.48e-12;32!UBERON:0001869;4.10e-12;32!UBERON:0001950;6.42e-12;20!UBERON:0002619;7.51e-12;22!UBERON:0001017;1.44e-08;75!UBERON:0000955;1.45e-08;68!UBERON:0001016;3.74e-07;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.54e-64,114;UBERON:0001049,3.20e-24,56;UBERON:0005068,3.20e-24,56;UBERON:0006241,3.20e-24,56;UBERON:0007135,3.20e-24,56;UBERON:0000073,5.73e-22,53;UBERON:0002616,5.73e-22,53;UBERON:0002780,3.84e-19,41;UBERON:0001890,3.84e-19,41;UBERON:0003080,3.84e-19,41;UBERON:0006240,3.84e-19,41;UBERON:0003075,7.41e-19,82;UBERON:0007284,7.41e-19,82;UBERON:0002346,2.52e-17,86;UBERON:0001017,3.35e-17,81;UBERON:0000955,3.76e-17,68;UBERON:0006238,3.76e-17,68;UBERON:0001016,4.71e-15,89;UBERON:0003528,5.47e-15,34;UBERON:0002020,5.47e-15,34;UBERON:0001893,8.36e-15,34;UBERON:0004111,2.45e-14,240;UBERON:0010314,6.64e-14,132;UBERON:0002791,1.57e-13,32;UBERON:0001869,2.10e-13,32;UBERON:0010371,6.34e-13,104;UBERON:0000025,1.24e-12,192;UBERON:0000956,1.59e-12,25;UBERON:0000203,1.59e-12,25;UBERON:0001950,6.57e-12,20;UBERON:0002619,6.91e-12,22;UBERON:0003056,8.48e-12,61;UBERON:0011216,1.42e-10,223;UBERON:0003103,1.64e-07,68;UBERON:0004121,5.02e-07,171;UBERON:0000924,5.02e-07,171;UBERON:0006601,5.02e-07,171 | |||
|phase1_expression=0,0,1.9733616573436,0,0.446961094427288,1.74467704820074,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0.572471974262113,3.96935832711364,1.38096903554283,0,0,0,0,0,0.154816123316076,0,0,0,0,0,35.5256531595165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,29.0776922873857,6.72610275577843,8.95505888235262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,0.670700859703636,0.767175371061182,0,0,0,0,0,0,0,0,5.76307932189936,0,0,0.324547393654683,0.348259474598534,0.930705723632056,0,0,0,2.18638648103376,0,0.347140501607594,0,1.67799774483962,3.02629846134074,2.71693456497854,2.84258435086262,6.40379272836078,13.0541038978221,4.02829317109147,0.760272105718513,7.32186172644509,0,0.81014194788176,5.26868396876071,2.2452937262617,3.60356737546631,0,0,0.366403487860815,0,0,0,0,0.25326102332916,0,0.286836620748814,0,0,0,0,0.311211035399766,0.404132016209064,0.653847612453835,0,0,0,0.312160076830321,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.484938170456436,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.59602091012043,7.01208869017229,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,7.79578817909799,0.925971025153221,1.71228737011138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37872730027914,0,0,0,0,0,0,0,0,0,0,0,0,0.845302752556,0,0,0,0,0,0,0,0,0.65147236858747,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,1.02341449813341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46139224653261,0,29.5706798584331,1.87103075804167,10.5798798890048,107.959076883203,0,0,0,0.831076008928724,0,0,0,0,0,0,7.21287081534056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13008116620243,0,0,0.876901770507525,0,0,0,0.6196469961995,0,0,0,0,0,0.844430541190656,0.329294892959902,0,0,0,0,0,6.96664125748166,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0,49.2961047439057,50.3659123448124,20.9556846896644,5.51857298466744,0,0,0,0,20.9921804473988,0,0,0,0,0,0,0,0,0,0,2.43410110628385,26.3126854718278,5.63948020351398,0,7.91144168068228,0.36408156524854,0,0,0,0,0,1.9882952955326,2.67271891179974,0,0,0,5.18044769452781,4.42054264849836,0,0,0,0,0,0,0,5.62267412130522,0,0,1.93866549219044,3.8034920246359,1.99613798001194,0,0,4.34999745260876,0,0,0,0,0,0,0.885741385813839,3.13550740426061,0,2.76448149828062,1.18219047581419,2.63262476584767,0,0,10.234384381005,0,0,0,0,1.5950057986596,0.0915975934018623,2.66517388009317,0,2.35470384592537,5.65119718460532,0,0,0,0,2.06617552674492,0,123.240770160157,0.141353071433941,0,4.97630965539252,3.98059040265026,13.4426631885398,0,0,0,2.56124305326573,21.6695964770673,2.10838001152805,0,0,0,4.73501283419269,2.41981432097328,1.53036380815245,5.43404584804996,0,0,0,0,0,0,0,0,0,0,0,5.94070672022902,0,0,0,0,8.53503345098091,0,10.3951140759045,0,0,2.27918865441163,0,0,4.26905989478705,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,5.06549901900374,5.10986352267889,0,0,14.243402464885,11.2288607765725,9.33234931949858,5.79069101447074,12.018329347824,10.7122299572099,13.7054283872922,0,0,0,0,0,0,0,0.795229689809303,2.86027152834309,0,0,0,0,0,2.79447960626913,0,7.72295931532142,7.60591527957473,0,0,0,23.5849457703211,16.5522992591358,0,0,0,0,0,1.8881279772348,0,0,0.293104467356165,0,2.32709321450791,4.49590845925146,0,0,4.48507132784318,6.75978511928564,4.55662960881915,5.95399226174341,0,0,0,3.80812462358632,5.5151776684994,3.36980134439808,2.95085367638824,0,3.54427271986794,2.68457782784319,4.75725536684699,1.14681839138014,2.77322628842131,3.22901295295194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0.899606224327209,0,0,0,0,0,0,0,1.45478927362048,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.42426995685538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.50493977876192,0,6.38535436228605,1.43581454968528,0.504143392443436,1.65977405914123,4.03689114079628,2.85538840518309,0,0,0,0,0,0,0,6.76892955143315,0,3.90757005616546,0,0,0,1.82351478469666,0.781078098613847,3.9270491335225,2.47321659756237,1.09394961803644,1.09651553371436,17.3673912436253,0,0,1.07140367175657,3.69912094440706,1.21393120847326,1.36597314810779,28.2960560818818,0,0,1.90315252335129,2.03895598044832,0,0,4.4741062924793,0.942693539496011,0,9.13158720509496,0,0,5.14631118071926,0,0,0,0,0,0,0,0,0,0,3.38709640152743,0,0.31020638566432,0,0,0,0,5.17943069750316,13.2435020844559,17.397216470073,14.085618798715,0,0,0,0,0,0,1.85217979459067,7.21246549663059,0,6.61900468735545,0,2.35570160537934,2.0793248022896,5.9171801861676,0,3.19545321131502,10.1198884118516,0,0,0,0,5.11235471772562,1.37618785021362,2.86679166302903,0,2.58367662725476,1.74540276136151,6.34832208618481,0,0,0,0,0,0,0,0,0,0,8.10832070935162,2.94760543171796,1.65833887891756,2.37895890482359,9.38229520364316,19.0451545170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| |||
|short_description=p2@CD34 | |||
}} |
Revision as of 03:17, 12 September 2013
Short description: | p2@CD34 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_CD34_5end |
Coexpression cluster: | C3929_clear_Renal_acute_CD133_placenta_CD34_diaphragm |
Association with transcript: | 0bp_to_NM_001025109, NM_001773, uc001hgw.1, uc001hgx.1, uc010psj.1_5end |
EntrezGene: | CD34 |
HGNC: | 1662 |
UniProt: | P28906 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 1.44e-08 | 36 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.