FFCP PHASE1:Hg19::chr12:75603536..75603547,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3747|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6234|TSSclassifier=S|UniProt=Q96PR1|association_with_transcript=-25bp_to_ENST00000298972,ENST00000341669,ENST00000350228,NM_139136,NM_139137,NM_153748,uc001sxe.2,uc001sxf.2,uc001sxg.1,uc010stw.1_5end|coexpression_cluster_id=C3|description=CAGE_peak_9_at_KCNC2_5end|id=chr12:75603536..75603547,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006601;5.41e-11;82|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!9.07e-76!57;UBERON:0005068!9.07e-76!57;UBERON:0006241!9.07e-76!57;UBERON:0007135!9.07e-76!57;UBERON:0002619!6.01e-68!22;UBERON:0002780!1.64e-66!41;UBERON:0001890!1.64e-66!41;UBERON:0006240!1.64e-66!41;UBERON:0003080!7.50e-65!42;UBERON:0002616!5.31e-63!59;UBERON:0001017!1.03e-62!82;UBERON:0000955!3.66e-61!69;UBERON:0006238!3.66e-61!69;UBERON:0001893!7.29e-61!34;UBERON:0002020!1.53e-60!34;UBERON:0003528!1.53e-60!34;UBERON:0000956!1.10e-59!25;UBERON:0000203!1.10e-59!25;UBERON:0005743!1.36e-59!86;UBERON:0001869!1.83e-58!32;UBERON:0001950!4.41e-58!20;UBERON:0000073!4.17e-57!94;UBERON:0001016!4.17e-57!94;UBERON:0002791!2.54e-56!33;UBERON:0003075!2.25e-52!86;UBERON:0007284!2.25e-52!86;UBERON:0002346!8.11e-50!90;UBERON:0003056!1.78e-43!61;UBERON:0007023!3.05e-41!115;UBERON:0000033!7.69e-35!123;UBERON:0000153!5.64e-33!129;UBERON:0007811!5.64e-33!129;UBERON:0004121!1.47e-29!169;UBERON:0000924!9.56e-29!173;UBERON:0006601!9.56e-29!173;UBERON:0002021!2.59e-28!5;UBERON:0000200!1.07e-23!6;UBERON:0000025!5.10e-20!194;UBERON:0000349!1.71e-18!5;UBERON:0001871!1.10e-17!7;UBERON:0002771!2.02e-17!3;UBERON:0000988!2.99e-17!3;UBERON:0004111!5.77e-15!241;UBERON:0000477!8.75e-13!286;UBERON:0003076!1.42e-12!15;UBERON:0003057!1.42e-12!15;UBERON:0001954!3.31e-12!2;UBERON:0003022!3.31e-12!2;UBERON:0002421!3.31e-12!2;UBERON:0002600!3.31e-12!2;UBERON:0002148!8.11e-12!2;UBERON:0009662!8.11e-12!2;UBERON:0000483!2.21e-11!309;UBERON:0000119!3.26e-11!312;UBERON:0002298!3.75e-11!8;UBERON:0001872!7.01e-11!5;UBERON:0000475!1.70e-10!365;UBERON:0000064!1.03e-09!219;UBERON:0002240!3.63e-08!3;UBERON:0006331!3.63e-08!3;UBERON:0001894!1.42e-07!7;UBERON:0006222!1.42e-07!7;UBERON:0004733!1.80e-07!12;UBERON:0002028!1.80e-07!12;UBERON:0007277!1.80e-07!12;UBERON:0002022!2.09e-07!1;UBERON:0007190!2.66e-07!1;UBERON:0001882!2.99e-07!1;UBERON:0005403!2.99e-07!1;UBERON:0002902!3.17e-07!1;UBERON:0009899!3.17e-07!1;UBERON:0002581!3.36e-07!1;UBERON:0003112!5.06e-07!1;UBERON:0000032!5.06e-07!1;UBERON:0005253!5.06e-07!1;UBERON:0003128!5.06e-07!1;UBERON:0002241!5.06e-07!1;UBERON:0001703!5.06e-07!1;UBERON:0004761!5.06e-07!1;UBERON:0009617!5.06e-07!1;UBERON:0004732!6.66e-07!13;UBERON:0002336!9.51e-07!1;UBERON:0001018!9.51e-07!1;UBERON:0002473!9.51e-07!1;UBERON:0005340!9.51e-07!1;UBERON:0002316!9.51e-07!1;UBERON:0003544!9.51e-07!1;UBERON:0001020!9.51e-07!1;UBERON:0005970!9.51e-07!1;UBERON:0002437!9.51e-07!1|ontology_enrichment_uberon_v019=UBERON:0001950;3.50e-38;20!UBERON:0001893;4.16e-35;34!UBERON:0001869;5.33e-35;32!UBERON:0002619;7.55e-35;22!UBERON:0000956;8.32e-31;25!UBERON:0000203;8.32e-31;25!UBERON:0002791;1.40e-28;32!UBERON:0002780;1.52e-28;41!UBERON:0001890;1.52e-28;41!UBERON:0003528;1.49e-27;34!UBERON:0002020;1.49e-27;34!UBERON:0000073;5.28e-20;53!UBERON:0002616;5.28e-20;53!UBERON:0002022;2.90e-18;1!UBERON:0002581;8.01e-18;1!UBERON:0002902;8.01e-18;1!UBERON:0001882;8.01e-18;1!UBERON:0009899;8.01e-18;1!UBERON:0007190;8.01e-18;1!UBERON:0005403;8.01e-18;1!UBERON:0000955;1.63e-17;68!UBERON:0001017;1.05e-14;75!UBERON:0001872;3.59e-14;5!UBERON:0002021;3.59e-14;5!UBERON:0000200;5.67e-12;6!UBERON:0001016;8.74e-11;83!UBERON:0000007;1.38e-09;2!UBERON:0007023;6.62e-09;114!UBERON:0000988;8.38e-07;3!UBERON:0001870;8.38e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0001869,7.06e-40,32;UBERON:0002780,1.82e-38,41;UBERON:0001890,1.82e-38,41;UBERON:0003080,1.82e-38,41;UBERON:0006240,1.82e-38,41;UBERON:0001950,3.41e-38,20;UBERON:0001893,1.42e-37,34;UBERON:0000073,4.82e-36,53;UBERON:0002616,4.82e-36,53;UBERON:0002619,7.38e-35,22;UBERON:0001049,4.11e-34,56;UBERON:0005068,4.11e-34,56;UBERON:0006241,4.11e-34,56;UBERON:0007135,4.11e-34,56;UBERON:0000955,4.57e-33,68;UBERON:0006238,4.57e-33,68;UBERON:0002791,1.58e-31,32;UBERON:0000956,8.15e-31,25;UBERON:0000203,8.15e-31,25;UBERON:0003528,1.05e-29,34;UBERON:0002020,1.05e-29,34;UBERON:0001017,8.85e-28,81;UBERON:0003056,7.26e-26,61;UBERON:0001016,5.43e-25,89;UBERON:0003075,3.27e-23,82;UBERON:0007284,3.27e-23,82;UBERON:0002346,4.13e-22,86;UBERON:0007023,5.08e-20,114;UBERON:0002022,2.66e-18,1;UBERON:0010371,3.45e-18,104;UBERON:0007190,5.26e-18,1;UBERON:0001882,7.37e-18,1;UBERON:0005403,7.37e-18,1;UBERON:0002902,8.72e-18,1;UBERON:0009899,8.72e-18,1;UBERON:0002581,1.03e-17,1;UBERON:0010314,3.48e-14,132;UBERON:0001872,3.60e-14,5;UBERON:0002021,4.39e-14,5;UBERON:0004121,8.03e-13,171;UBERON:0000924,8.03e-13,171;UBERON:0006601,8.03e-13,171;UBERON:0000200,5.37e-12,6;UBERON:0011216,1.33e-09,223;UBERON:0000025,1.73e-09,192;UBERON:0000007,2.02e-09,2;UBERON:0004111,2.14e-07,240;UBERON:0001870,6.88e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.844016498463076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93866549219044,0.556608588971108,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.87754158861589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269604531922708,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.83601308272048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.681017030557878,0,0,0,0,0,2.55148137963704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.52893040697076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.976210119215705,0.751145584238999,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0,0,0,0,0,0,0,0,1.47727217721857,1.41696576325585,0.798169295285756,0.41023272848151,0.756215088665154,1.45230230174858,0.807378228159255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82351478469666,0,0.206686796501184,1.58539525484767,0,0,0,0,0,0,0,0,1.13831095675649,0,0,0,1.2914249265598,1.44700101838268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0,0,0,0,0,0.196308467114945,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,2.03974470572744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p9@KCNC2}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=3747 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6234 | |||
|TSSclassifier=S | |||
|UniProt=Q96PR1 | |||
|association_with_transcript=-25bp_to_ENST00000298972,ENST00000341669,ENST00000350228,NM_139136,NM_139137,NM_153748,uc001sxe.2,uc001sxf.2,uc001sxg.1,uc010stw.1_5end | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_9_at_KCNC2_5end | |||
|id=chr12:75603536..75603547,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.41e-11;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p9@KCNC2 | |||
}} |
Revision as of 00:26, 11 September 2013
Short description: | p9@KCNC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_KCNC2_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -25bp_to_ENST00000298972, ENST00000341669, ENST00000350228, NM_139136, NM_139137, NM_153748, uc001sxe.2, uc001sxf.2, uc001sxg.1, uc010stw.1_5end |
EntrezGene: | KCNC2 |
HGNC: | 6234 |
UniProt: | Q96PR1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.