FFCP PHASE1:Hg19::chr17:43503012..43503035,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=201176|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=31813|TSSclassifier=S|UniProt=Q6ZUM4,Q8N2Y9|association_with_transcript=0bp_to_NM_199282,uc002iix.2_5end|coexpression_cluster_id=C3642|description=CAGE_peak_4_at_ARHGAP27_5end|id=chr17:43503012..43503035,-|ontology_enrichment_celltype=CL:0000066!9.53e-31!254;CL:0000223!1.67e-12!59;CL:0002076!4.19e-11!43;CL:0000082!3.10e-08!19|ontology_enrichment_celltype_v019=CL:0000082;4.15e-08;19!CL:0002251;9.94e-07;20|ontology_enrichment_celltype_v019_2=CL:0000066,1.92e-27,253;CL:0000223,1.22e-10,58;CL:0000082,3.95e-08,19;CL:0002076,5.80e-08,42|ontology_enrichment_development_v019=UBERON:0003104;1.23e-11;31!UBERON:0003918;1.90e-10;10!UBERON:0007687;1.90e-10;10!UBERON:0001041;1.82e-09;30!UBERON:0006595;3.91e-09;86!UBERON:0008947;1.63e-08;29|ontology_enrichment_disease=DOID:305!3.90e-41!106;DOID:0050687!5.54e-34!143;DOID:162!7.75e-23!235;DOID:14566!2.71e-21!239;DOID:299!1.95e-12!25;DOID:1749!2.03e-09!14;DOID:7!4.21e-08!39;DOID:0050615!1.91e-07!16;DOID:1324!6.12e-07!15|ontology_enrichment_disease_v019=DOID:305;6.53e-13;106!DOID:1749;2.86e-12;14!DOID:299;8.64e-12;25!DOID:0050687;3.49e-09;143!DOID:7;2.31e-08;39!DOID:0050615;6.07e-08;16!DOID:3119;7.04e-08;14!DOID:1324;2.92e-07;15|ontology_enrichment_disease_v019_2=DOID:305,5.42e-46,106;DOID:0050687,2.33e-37,143;DOID:162,3.98e-22,235;DOID:14566,5.69e-21,239;DOID:1749,2.32e-12,14;DOID:299,6.54e-12,25;DOID:7,1.82e-10,39;DOID:0050615,5.89e-08,16;DOID:3119,6.69e-08,14;DOID:1324,2.73e-07,15|ontology_enrichment_uberon=UBERON:0004119!8.18e-24!169;UBERON:0000925!8.18e-24!169;UBERON:0006595!8.18e-24!169;UBERON:0004921!3.27e-22!129;UBERON:0004185!3.27e-22!129;UBERON:0001007!1.12e-21!155;UBERON:0001555!1.12e-21!155;UBERON:0007026!1.12e-21!155;UBERON:0000077!1.94e-18!130;UBERON:0005177!5.64e-17!107;UBERON:0001041!8.44e-16!98;UBERON:0000062!1.96e-13!511;UBERON:0000466!1.33e-12!126;UBERON:0005409!1.45e-12!35;UBERON:0000464!1.93e-12!104;UBERON:0005911!1.91e-11!82;UBERON:0008947!5.89e-11!38;UBERON:0003258!5.89e-11!38;UBERON:0001008!9.79e-11!45;UBERON:0006554!1.50e-10!44;UBERON:0000065!2.13e-10!53;UBERON:0001004!2.71e-10!72;UBERON:0000160!8.39e-10!27;UBERON:0009569!3.14e-09!113;UBERON:0005153!3.92e-09!37;UBERON:0005157!4.59e-09!51;UBERON:0000072!6.00e-09!46;UBERON:0002048!6.70e-09!22;UBERON:0000117!6.70e-09!22;UBERON:0000171!6.70e-09!22;UBERON:0000170!6.70e-09!22;UBERON:0005597!6.70e-09!22;UBERON:0000118!6.70e-09!22;UBERON:0002113!1.10e-08!27;UBERON:0003918!1.10e-08!27;UBERON:0005095!1.10e-08!27;UBERON:0007687!1.10e-08!27;UBERON:0001048!1.68e-08!168;UBERON:0005172!1.75e-08!55;UBERON:0005173!1.75e-08!55;UBERON:0000489!2.51e-08!32;UBERON:0004802!3.10e-08!19;UBERON:0000115!3.10e-08!19;UBERON:0000481!1.59e-07!347;UBERON:0002075!1.68e-07!18;UBERON:0005178!1.89e-07!34;UBERON:0002224!1.89e-07!34;UBERON:0003104!2.37e-07!238;UBERON:0009142!2.37e-07!238;UBERON:0000064!2.58e-07!219;UBERON:0002108!4.09e-07!14;UBERON:0005181!5.53e-07!35|ontology_enrichment_uberon_v019=UBERON:0006554;2.77e-13;30!UBERON:0001008;2.77e-13;30!UBERON:0005409;5.44e-13;22!UBERON:0002113;3.07e-11;24!UBERON:0011143;3.07e-11;24!UBERON:0004921;1.57e-10;33!UBERON:0000489;2.34e-10;29!UBERON:0000160;4.85e-09;17!UBERON:0004802;4.15e-08;19!UBERON:0000115;4.15e-08;19!UBERON:0002075;6.33e-08;18!UBERON:0005911;7.60e-08;36!UBERON:0002048;1.81e-07;22!UBERON:0000117;1.81e-07;22!UBERON:0000171;1.81e-07;22!UBERON:0000170;1.81e-07;22!UBERON:0004807;2.48e-07;22!UBERON:0005177;5.39e-07;99!UBERON:0001264;6.52e-07;10|ontology_enrichment_uberon_v019_2=UBERON:0005177,5.21e-21,101;UBERON:0004119,8.72e-16,160;UBERON:0000925,8.72e-16,160;UBERON:0006595,8.72e-16,160;UBERON:0004921,1.13e-15,118;UBERON:0001007,2.69e-15,145;UBERON:0001555,2.69e-15,145;UBERON:0007026,2.69e-15,145;UBERON:0002113,1.81e-12,26;UBERON:0003918,1.81e-12,26;UBERON:0011143,1.81e-12,26;UBERON:0005095,1.81e-12,26;UBERON:0007687,1.81e-12,26;UBERON:0000489,1.28e-11,31;UBERON:0006554,2.08e-11,47;UBERON:0001008,5.64e-11,48;UBERON:0009569,7.34e-11,112;UBERON:0005409,9.84e-11,25;UBERON:0005172,1.69e-10,54;UBERON:0005173,1.69e-10,54;UBERON:0001041,1.63e-09,87;UBERON:0005911,2.02e-09,82;UBERON:0000160,5.19e-09,17;UBERON:0002417,1.67e-08,60;UBERON:0000916,1.67e-08,60;UBERON:0008947,1.89e-08,38;UBERON:0003258,1.89e-08,38;UBERON:0003103,3.54e-08,68;UBERON:0004802,3.95e-08,19;UBERON:0000115,3.95e-08,19;UBERON:0002075,6.71e-08,18;UBERON:0002048,1.75e-07,22;UBERON:0000117,1.75e-07,22;UBERON:0000171,1.75e-07,22;UBERON:0000170,1.75e-07,22;UBERON:0005597,1.75e-07,22;UBERON:0000118,1.75e-07,22;UBERON:0000072,5.55e-07,47;UBERON:0001264,7.81e-07,10|phase1_expression=0,0,0,0,0,0,0,0,0,1.47440361900905,6.97801167972428,1.31064823278103,0.527533956456907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.75826367343678,2.10844143144775,0.739508020333575,0,0,0,0,0,0.434021741431704,0.447830948479849,0,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0.188242339542605,0,0,0,0,0.639337125799041,0,0.199463657621632,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=201176 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=31813 | |||
|TSSclassifier=S | |||
|UniProt=Q6ZUM4,Q8N2Y9 | |||
|association_with_transcript=0bp_to_NM_199282,uc002iix.2_5end | |||
|coexpression_cluster_id=C3642 | |||
|description=CAGE_peak_4_at_ARHGAP27_5end | |||
|id=chr17:43503012..43503035,- | |||
|ontology_enrichment_celltype=CL:0000066!9.53e-31!254;CL:0000223!1.67e-12!59;CL:0002076!4.19e-11!43;CL:0000082!3.10e-08!19 | |||
|ontology_enrichment_celltype_v019=CL:0000082;4.15e-08;19!CL:0002251;9.94e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.92e-27,253;CL:0000223,1.22e-10,58;CL:0000082,3.95e-08,19;CL:0002076,5.80e-08,42 | |||
|ontology_enrichment_development_v019=UBERON:0003104;1.23e-11;31!UBERON:0003918;1.90e-10;10!UBERON:0007687;1.90e-10;10!UBERON:0001041;1.82e-09;30!UBERON:0006595;3.91e-09;86!UBERON:0008947;1.63e-08;29 | |||
|ontology_enrichment_disease=DOID:305!3.90e-41!106;DOID:0050687!5.54e-34!143;DOID:162!7.75e-23!235;DOID:14566!2.71e-21!239;DOID:299!1.95e-12!25;DOID:1749!2.03e-09!14;DOID:7!4.21e-08!39;DOID:0050615!1.91e-07!16;DOID:1324!6.12e-07!15 | |||
|ontology_enrichment_disease_v019=DOID:305;6.53e-13;106!DOID:1749;2.86e-12;14!DOID:299;8.64e-12;25!DOID:0050687;3.49e-09;143!DOID:7;2.31e-08;39!DOID:0050615;6.07e-08;16!DOID:3119;7.04e-08;14!DOID:1324;2.92e-07;15 | |||
|ontology_enrichment_disease_v019_2=DOID:305,5.42e-46,106;DOID:0050687,2.33e-37,143;DOID:162,3.98e-22,235;DOID:14566,5.69e-21,239;DOID:1749,2.32e-12,14;DOID:299,6.54e-12,25;DOID:7,1.82e-10,39;DOID:0050615,5.89e-08,16;DOID:3119,6.69e-08,14;DOID:1324,2.73e-07,15 | |||
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| |||
|short_description=p4@ARHGAP27 | |||
}} |
Revision as of 14:04, 11 September 2013
Short description: | p4@ARHGAP27 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_ARHGAP27_5end |
Coexpression cluster: | C3642_colon_small_signet_choriocarcinoma_pancreatic_rectal_immature |
Association with transcript: | 0bp_to_NM_199282, uc002iix.2_5end |
EntrezGene: | ARHGAP27 |
HGNC: | 31813 |
UniProt: | Q6ZUM4Q8N2Y9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.92e-27 | 253 |
endodermal cell | 1.22e-10 | 58 |
epithelial cell of lung | 3.95e-08 | 19 |
endo-epithelial cell | 5.80e-08 | 42 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 5.42e-46 | 106 |
cell type cancer | 2.33e-37 | 143 |
cancer | 3.98e-22 | 235 |
disease of cellular proliferation | 5.69e-21 | 239 |
squamous cell carcinoma | 2.32e-12 | 14 |
adenocarcinoma | 6.54e-12 | 25 |
disease of anatomical entity | 1.82e-10 | 39 |
respiratory system cancer | 5.89e-08 | 16 |
gastrointestinal system cancer | 6.69e-08 | 14 |
lung cancer | 2.73e-07 | 15 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.