FFCP PHASE1:Hg19::chr17:66287663..66287684,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=22901|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=24102|TSSclassifier=S|UniProt=Q96EG1|association_with_transcript=4bp_to_uc002jhb.1_5end|description=CAGE_peak_2_at_ARSG_5end|id=chr17:66287663..66287684,+|ontology_enrichment_celltype=CL:0000738!1.31e-25!140;CL:0002087!1.02e-19!119;CL:0002031!2.71e-19!124;CL:0000542!4.03e-17!53;CL:0000051!4.03e-17!53;CL:0000037!5.36e-17!172;CL:0000566!5.36e-17!172;CL:0000838!5.42e-17!52;CL:0002032!2.16e-16!165;CL:0000837!2.16e-16!165;CL:0000988!3.78e-16!182;CL:0000791!1.59e-10!18;CL:0000789!1.59e-10!18;CL:0002420!1.59e-10!18;CL:0002419!1.59e-10!18;CL:0000790!1.59e-10!18;CL:0000945!5.36e-09!24;CL:0000826!5.36e-09!24;CL:0000766!1.79e-08!76;CL:0000084!2.38e-08!25;CL:0000827!2.38e-08!25;CL:0000625!8.02e-08!11|ontology_enrichment_celltype_v019=CL:0000791;1.19e-12;18!CL:0000789;1.19e-12;18!CL:0002419;1.19e-12;18!CL:0000625;6.95e-11;11!CL:0000542;1.76e-10;53!CL:0000084;1.92e-09;25!CL:0000945;3.93e-09;24!CL:0000236;1.96e-07;13|ontology_enrichment_celltype_v019_2=CL:0000738,5.73e-25,136;CL:0002087,3.07e-19,115;CL:0000838,5.37e-19,52;CL:0002031,5.50e-19,120;CL:0000542,2.29e-18,53;CL:0000051,2.29e-18,53;CL:0000037,4.75e-17,168;CL:0000988,3.73e-16,177;CL:0002032,5.56e-16,161;CL:0000837,5.56e-16,161;CL:0000791,8.87e-13,18;CL:0000789,8.87e-13,18;CL:0002420,8.87e-13,18;CL:0002419,8.87e-13,18;CL:0000790,8.87e-13,18;CL:0000625,5.21e-11,11;CL:0000084,9.55e-10,25;CL:0000827,9.55e-10,25;CL:0000945,4.09e-09,24;CL:0000826,4.09e-09,24;CL:0002393,7.21e-09,9;CL:0002397,7.21e-09,9;CL:0000766,1.39e-07,72;CL:0000236,4.59e-07,14;CL:0000094,8.14e-07,8|ontology_enrichment_development_v019=CL:0000790;1.19e-12;18!CL:0000051;1.76e-10;53|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!3.18e-13!57;UBERON:0005068!3.18e-13!57;UBERON:0006241!3.18e-13!57;UBERON:0007135!3.18e-13!57;UBERON:0005743!5.95e-13!86;UBERON:0000073!1.90e-12!94;UBERON:0001016!1.90e-12!94;UBERON:0001017!2.38e-12!82;UBERON:0007023!2.75e-12!115;UBERON:0000955!2.49e-11!69;UBERON:0006238!2.49e-11!69;UBERON:0002780!3.03e-11!41;UBERON:0001890!3.03e-11!41;UBERON:0006240!3.03e-11!41;UBERON:0002616!1.11e-10!59;UBERON:0003080!1.47e-10!42;UBERON:0001869!1.09e-09!32;UBERON:0003075!1.65e-09!86;UBERON:0007284!1.65e-09!86;UBERON:0001893!3.60e-09!34;UBERON:0002020!1.04e-08!34;UBERON:0003528!1.04e-08!34;UBERON:0002791!1.06e-08!33;UBERON:0002346!1.52e-08!90;UBERON:0003056!2.12e-08!61;UBERON:0002619!1.04e-07!22;UBERON:0001950!2.40e-07!20;UBERON:0000956!4.02e-07!25;UBERON:0000203!4.02e-07!25;UBERON:0002390!4.68e-07!102;UBERON:0003061!4.68e-07!102|ontology_enrichment_uberon_v019=UBERON:0001869;2.59e-08;32!UBERON:0001893;3.64e-08;34!UBERON:0001950;4.29e-08;20!UBERON:0002619;6.80e-08;22!UBERON:0002780;7.61e-08;41!UBERON:0001890;7.61e-08;41!UBERON:0003528;1.37e-07;34!UBERON:0002020;1.37e-07;34!UBERON:0000073;1.47e-07;53!UBERON:0002616;1.47e-07;53!UBERON:0002791;2.00e-07;32|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.03e-13,53;UBERON:0002616,1.03e-13,53;UBERON:0001049,4.11e-13,56;UBERON:0005068,4.11e-13,56;UBERON:0006241,4.11e-13,56;UBERON:0007135,4.11e-13,56;UBERON:0002780,6.33e-12,41;UBERON:0001890,6.33e-12,41;UBERON:0003080,6.33e-12,41;UBERON:0006240,6.33e-12,41;UBERON:0000955,1.01e-11,68;UBERON:0006238,1.01e-11,68;UBERON:0001017,3.95e-11,81;UBERON:0007023,6.82e-11,114;UBERON:0001016,1.41e-10,89;UBERON:0001869,1.41e-09,32;UBERON:0001893,2.29e-09,34;UBERON:0003528,1.81e-08,34;UBERON:0002020,1.81e-08,34;UBERON:0002791,1.85e-08,32;UBERON:0001950,2.80e-08,20;UBERON:0002619,4.24e-08,22;UBERON:0003075,8.45e-07,82;UBERON:0007284,8.45e-07,82|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0.261185628199839,0,0,0,0,0,1.32558950291166,0,0,0,0,0.492484232307152,0.408001382488506,0.313454721478088,0.286235987131057,0.136874425072884,0.627713197974014,0.61130724598361,1.06730766284929,1.02324015707783,1.96682138424452,0.767658796194425,3.40595471295367,0,0,0,0.92960640696362,1.56386155736164,0,3.32397245119126,3.00816671205213,2.38711957787437,1.79132379391939,1.94336199611388,1.54545340580512,1.01778767145695,0.377875943688809,1.69808842831471,1.16214518452842,0.822335776043652,0.619412741790207,0,0.768482119587302,0,1.72372840368309,0,0,1.31769637679823,0,0,0.918251677112708,0.320929027076094,0,0.989553900560148,0.598390972864896,0.852449501065388,0,0.56738522469114,0.622822248995575,0.502497330513487,0,1.08594422352558,3.02699751316684,1.10483290796269,0,2.95757400836718,2.55125159958052,3.14487968262564,2.69588714751588,3.15371474967163,2.73233497385036,4.27519115611873,2.98375015798635,2.55729815270488,5.27988733383968,2.18455444504853,2.66852776159066,1.70692089026603,6.4063357925762,5.17277195959035,5.2883589822789,6.67837628174755,1.70763890732835,1.76171156811282,1.91136614062614,1.32171328579026,0.560508562981536,0,2.360517241366,2.35806457649499,0.822405995998037,1.83905144929746,4.56291173287027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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=22901 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24102 | |||
|TSSclassifier=S | |||
|UniProt=Q96EG1 | |||
|association_with_transcript=4bp_to_uc002jhb.1_5end | |||
|description=CAGE_peak_2_at_ARSG_5end | |||
|id=chr17:66287663..66287684,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.31e-25!140;CL:0002087!1.02e-19!119;CL:0002031!2.71e-19!124;CL:0000542!4.03e-17!53;CL:0000051!4.03e-17!53;CL:0000037!5.36e-17!172;CL:0000566!5.36e-17!172;CL:0000838!5.42e-17!52;CL:0002032!2.16e-16!165;CL:0000837!2.16e-16!165;CL:0000988!3.78e-16!182;CL:0000791!1.59e-10!18;CL:0000789!1.59e-10!18;CL:0002420!1.59e-10!18;CL:0002419!1.59e-10!18;CL:0000790!1.59e-10!18;CL:0000945!5.36e-09!24;CL:0000826!5.36e-09!24;CL:0000766!1.79e-08!76;CL:0000084!2.38e-08!25;CL:0000827!2.38e-08!25;CL:0000625!8.02e-08!11 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.19e-12;18!CL:0000789;1.19e-12;18!CL:0002419;1.19e-12;18!CL:0000625;6.95e-11;11!CL:0000542;1.76e-10;53!CL:0000084;1.92e-09;25!CL:0000945;3.93e-09;24!CL:0000236;1.96e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,5.73e-25,136;CL:0002087,3.07e-19,115;CL:0000838,5.37e-19,52;CL:0002031,5.50e-19,120;CL:0000542,2.29e-18,53;CL:0000051,2.29e-18,53;CL:0000037,4.75e-17,168;CL:0000988,3.73e-16,177;CL:0002032,5.56e-16,161;CL:0000837,5.56e-16,161;CL:0000791,8.87e-13,18;CL:0000789,8.87e-13,18;CL:0002420,8.87e-13,18;CL:0002419,8.87e-13,18;CL:0000790,8.87e-13,18;CL:0000625,5.21e-11,11;CL:0000084,9.55e-10,25;CL:0000827,9.55e-10,25;CL:0000945,4.09e-09,24;CL:0000826,4.09e-09,24;CL:0002393,7.21e-09,9;CL:0002397,7.21e-09,9;CL:0000766,1.39e-07,72;CL:0000236,4.59e-07,14;CL:0000094,8.14e-07,8 | |||
|ontology_enrichment_development_v019=CL:0000790;1.19e-12;18!CL:0000051;1.76e-10;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.18e-13!57;UBERON:0005068!3.18e-13!57;UBERON:0006241!3.18e-13!57;UBERON:0007135!3.18e-13!57;UBERON:0005743!5.95e-13!86;UBERON:0000073!1.90e-12!94;UBERON:0001016!1.90e-12!94;UBERON:0001017!2.38e-12!82;UBERON:0007023!2.75e-12!115;UBERON:0000955!2.49e-11!69;UBERON:0006238!2.49e-11!69;UBERON:0002780!3.03e-11!41;UBERON:0001890!3.03e-11!41;UBERON:0006240!3.03e-11!41;UBERON:0002616!1.11e-10!59;UBERON:0003080!1.47e-10!42;UBERON:0001869!1.09e-09!32;UBERON:0003075!1.65e-09!86;UBERON:0007284!1.65e-09!86;UBERON:0001893!3.60e-09!34;UBERON:0002020!1.04e-08!34;UBERON:0003528!1.04e-08!34;UBERON:0002791!1.06e-08!33;UBERON:0002346!1.52e-08!90;UBERON:0003056!2.12e-08!61;UBERON:0002619!1.04e-07!22;UBERON:0001950!2.40e-07!20;UBERON:0000956!4.02e-07!25;UBERON:0000203!4.02e-07!25;UBERON:0002390!4.68e-07!102;UBERON:0003061!4.68e-07!102 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;2.59e-08;32!UBERON:0001893;3.64e-08;34!UBERON:0001950;4.29e-08;20!UBERON:0002619;6.80e-08;22!UBERON:0002780;7.61e-08;41!UBERON:0001890;7.61e-08;41!UBERON:0003528;1.37e-07;34!UBERON:0002020;1.37e-07;34!UBERON:0000073;1.47e-07;53!UBERON:0002616;1.47e-07;53!UBERON:0002791;2.00e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.03e-13,53;UBERON:0002616,1.03e-13,53;UBERON:0001049,4.11e-13,56;UBERON:0005068,4.11e-13,56;UBERON:0006241,4.11e-13,56;UBERON:0007135,4.11e-13,56;UBERON:0002780,6.33e-12,41;UBERON:0001890,6.33e-12,41;UBERON:0003080,6.33e-12,41;UBERON:0006240,6.33e-12,41;UBERON:0000955,1.01e-11,68;UBERON:0006238,1.01e-11,68;UBERON:0001017,3.95e-11,81;UBERON:0007023,6.82e-11,114;UBERON:0001016,1.41e-10,89;UBERON:0001869,1.41e-09,32;UBERON:0001893,2.29e-09,34;UBERON:0003528,1.81e-08,34;UBERON:0002020,1.81e-08,34;UBERON:0002791,1.85e-08,32;UBERON:0001950,2.80e-08,20;UBERON:0002619,4.24e-08,22;UBERON:0003075,8.45e-07,82;UBERON:0007284,8.45e-07,82 | |||
|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0.261185628199839,0,0,0,0,0,1.32558950291166,0,0,0,0,0.492484232307152,0.408001382488506,0.313454721478088,0.286235987131057,0.136874425072884,0.627713197974014,0.61130724598361,1.06730766284929,1.02324015707783,1.96682138424452,0.767658796194425,3.40595471295367,0,0,0,0.92960640696362,1.56386155736164,0,3.32397245119126,3.00816671205213,2.38711957787437,1.79132379391939,1.94336199611388,1.54545340580512,1.01778767145695,0.377875943688809,1.69808842831471,1.16214518452842,0.822335776043652,0.619412741790207,0,0.768482119587302,0,1.72372840368309,0,0,1.31769637679823,0,0,0.918251677112708,0.320929027076094,0,0.989553900560148,0.598390972864896,0.852449501065388,0,0.56738522469114,0.622822248995575,0.502497330513487,0,1.08594422352558,3.02699751316684,1.10483290796269,0,2.95757400836718,2.55125159958052,3.14487968262564,2.69588714751588,3.15371474967163,2.73233497385036,4.27519115611873,2.98375015798635,2.55729815270488,5.27988733383968,2.18455444504853,2.66852776159066,1.70692089026603,6.4063357925762,5.17277195959035,5.2883589822789,6.67837628174755,1.70763890732835,1.76171156811282,1.91136614062614,1.32171328579026,0.560508562981536,0,2.360517241366,2.35806457649499,0.822405995998037,1.83905144929746,4.56291173287027,4.73447805734733,3.89653456815823,2.89667187901451,3.53527088969805,4.2091439970888,2.70803863765016,3.20228299314188,2.60118695119756,1.97325485524411,2.76350017785848,1.73881851441031,4.00373720537563,5.35081656179426,5.22677619024884,2.37949619664889,3.83220493601921,6.8725489096526,2.02415753615602,3.82278497188916,5.20866763085135,8.55406840003537,5.42070428679982,4.73550461271348,2.49861453104692,3.07810427657222,10.6746639599736,1.81446068902259,2.13952156626806,2.46201486600758,0,0,0.639312809217652,0.361439152384566,0,0,0,0.486634870302636,0.661743720148475,0.221729397462564,0.527008714158756,1.76821751921912,0.728590576585084,0,0.324547393654683,0.696518949197069,1.19662164466979,0.476981248610684,0,0.371457501329565,0.198762407366705,0,0,0,0,0,0,0.516833518338658,0,0.66944122552934,0,0,0.488124115096339,0,0,0.17859945656816,0.44905874525234,0.563057402416611,0,0,0.366403487860815,3.9534125230819,3.87780264148325,0,0.496971951695318,0,0,0,0,0,0,0,0,0.269421344139376,0,0.302714855289863,0,0,0.312160076830321,0,0.149448680551801,0,0,0,0.408308342509787,0.368502951935304,0.413303124703062,1.18800285728205,0.494533858557114,0,0,0,0,0.277064115484183,0,0,0.150238058906597,0.113432183160021,0,0,0,0,0.206105058476878,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46368447355514,2.12047629314376,1.16193942869518,0.725627385107593,0.756962552626885,0.72995471815166,0,0,0,0.464367928031979,0,0.828147600278907,0.842923450390509,0.482022059766964,1.54411561825352,1.08939722046203,0.237270619111097,0.404493924480493,0.196221465125346,0,0,0,0,0,0,0.982827216677626,0,2.20731549707325,1.59884970106048,0.514703430895577,0,0,0,0.0925884451585296,0,0,0,0.695582429850461,0.70445216541493,0.866198686566443,0,0.380508304469197,14.223679163267,12.0188062693282,0.738651018262192,1.40402559083543,0.445893486866185,0,0,0,0,0,0,0.492663237895943,2.46535615237033,1.65862492432618,3.02651902175619,1.13618190083742,1.46045156871989,4.58386110669933,2.34434894420094,0,1.43958489784653,0,0.857479297891735,0.112131084345361,0.43596006883328,0.07333828582095,0.129271715757778,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,3.64871341923571,1.50677127429638,0,0.239624855491583,0,0,0,0,0.358121926479791,0.896681151948218,1.77327684181734,1.50939302401662,1.79680250791648,0.254094624222463,0,0.773288812777695,0.670065061337395,3.82763250991898,7.49007023947182,8.97484377612075,8.70272578215674,0.12269149171914,0.500170521059677,0,0,0,0.157702415033935,0.234282829985426,0,0,0,0,0,0.173767228936166,3.32861967686659,1.37257369524342,3.51505644408909,1.72571360654893,2.13455115606889,0,0,0,0,0,0,0,0,0,0,0,0.355123450626254,0,0,0,1.20859449591622,0,0,0,0,0,0,0.0770153371044148,0,0,0.105551628892876,0,0,0.215915916102139,1.54227252690289,0,0,0,0,0,0.219259876645935,0,0.256450125116389,0.984043937099117,0.650756789328606,0.618246069886334,0.183138929636687,0.41254749960294,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0.510450849978337,0.10115778085555,0,0.62962469366128,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0.179872457583315,0,0.117812402345686,0,0,0.421258456238981,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0.196498082026242,0,0,0,0,0,0.699869440489966,0,0,0,0.188287601553558,0,0,0,0,2.53723804616085,2.29391162142713,0.569647187174163,0.714695326373367,2.05681136543097,0.648473311192717,3.7802200606668,1.58625035258854,1.1750647824022,0,0.245040215981032,0.929015875628594,0.432807638929335,1.9919716137556,0.318852545457645,0.59873811429845,0,0,0,0,0.684704037099577,0,0,0.50787533340481,0.321176150207399,0,1.70338495076131,0,0.614481528616916,0,0,0,1.39203086947621,0,0.811367035427949,0,0,0,0,0.606802608747567,1.67165076416218,1.70481688083848,0,0,0,2.98244294329889,0.70334708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| |||
|short_description=p2@ARSG | |||
}} |
Revision as of 15:13, 11 September 2013
Short description: | p2@ARSG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_ARSG_5end |
Coexpression cluster: | NA |
Association with transcript: | 4bp_to_uc002jhb.1_5end |
EntrezGene: | ARSG |
HGNC: | 24102 |
UniProt: | Q96EG1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 5.73e-25 | 136 |
nongranular leukocyte | 3.07e-19 | 115 |
lymphoid lineage restricted progenitor cell | 5.37e-19 | 52 |
hematopoietic lineage restricted progenitor cell | 5.50e-19 | 120 |
lymphocyte | 2.29e-18 | 53 |
common lymphoid progenitor | 2.29e-18 | 53 |
hematopoietic stem cell | 4.75e-17 | 168 |
hematopoietic cell | 3.73e-16 | 177 |
hematopoietic oligopotent progenitor cell | 5.56e-16 | 161 |
hematopoietic multipotent progenitor cell | 5.56e-16 | 161 |
mature alpha-beta T cell | 8.87e-13 | 18 |
alpha-beta T cell | 8.87e-13 | 18 |
immature T cell | 8.87e-13 | 18 |
mature T cell | 8.87e-13 | 18 |
immature alpha-beta T cell | 8.87e-13 | 18 |
CD8-positive, alpha-beta T cell | 5.21e-11 | 11 |
T cell | 9.55e-10 | 25 |
pro-T cell | 9.55e-10 | 25 |
lymphocyte of B lineage | 4.09e-09 | 24 |
pro-B cell | 4.09e-09 | 24 |
intermediate monocyte | 7.21e-09 | 9 |
CD14-positive, CD16-positive monocyte | 7.21e-09 | 9 |
myeloid leukocyte | 1.39e-07 | 72 |
B cell | 4.59e-07 | 14 |
granulocyte | 8.14e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 1.03e-13 | 53 |
regional part of brain | 1.03e-13 | 53 |
neural tube | 4.11e-13 | 56 |
neural rod | 4.11e-13 | 56 |
future spinal cord | 4.11e-13 | 56 |
neural keel | 4.11e-13 | 56 |
regional part of forebrain | 6.33e-12 | 41 |
forebrain | 6.33e-12 | 41 |
anterior neural tube | 6.33e-12 | 41 |
future forebrain | 6.33e-12 | 41 |
brain | 1.01e-11 | 68 |
future brain | 1.01e-11 | 68 |
central nervous system | 3.95e-11 | 81 |
adult organism | 6.82e-11 | 114 |
nervous system | 1.41e-10 | 89 |
cerebral hemisphere | 1.41e-09 | 32 |
telencephalon | 2.29e-09 | 34 |
brain grey matter | 1.81e-08 | 34 |
gray matter | 1.81e-08 | 34 |
regional part of telencephalon | 1.85e-08 | 32 |
neocortex | 2.80e-08 | 20 |
regional part of cerebral cortex | 4.24e-08 | 22 |
neural plate | 8.45e-07 | 82 |
presumptive neural plate | 8.45e-07 | 82 |
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