FFCP PHASE1:Hg19::chr19:8674670..8674700,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr19:8674670..8674700,+|id=chr19:8674670..8674700,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000767;4.62e-11;3!CL:0000623;4.62e-11;3!CL:0000081;4.94e-11;11!CL:0002580;1.22e-10;3!CL:0000128;8.32e-08;7!CL:0000126;8.32e-08;7!CL:0000127;8.32e-08;7!CL:0002575;1.20e-07;2!CL:0000094;3.11e-07;8!CL:0002334;9.82e-07;12|ontology_enrichment_celltype_v019_2=CL:0000767,2.80e-11,3;CL:0000623,3.00e-11,3;CL:0000825,3.00e-11,3;CL:0000081,4.38e-11,11;CL:0002580,6.39e-11,3;CL:0000128,7.53e-08,7;CL:0000126,7.53e-08,7;CL:0000127,7.53e-08,7;CL:0002453,7.53e-08,7;CL:0002575,1.81e-07,2;CL:0000094,2.37e-07,8;CL:0002334,8.32e-07,12|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!8.02e-23!57;UBERON:0005068!8.02e-23!57;UBERON:0006241!8.02e-23!57;UBERON:0007135!8.02e-23!57;UBERON:0002616!7.18e-21!59;UBERON:0003075!3.20e-18!86;UBERON:0007284!3.20e-18!86;UBERON:0000955!4.24e-18!69;UBERON:0006238!4.24e-18!69;UBERON:0001017!7.68e-18!82;UBERON:0002020!8.44e-18!34;UBERON:0003528!8.44e-18!34;UBERON:0001893!1.53e-17!34;UBERON:0002346!3.95e-17!90;UBERON:0005743!4.18e-17!86;UBERON:0002791!8.13e-17!33;UBERON:0003080!8.82e-17!42;UBERON:0001869!2.76e-16!32;UBERON:0002780!3.32e-16!41;UBERON:0001890!3.32e-16!41;UBERON:0006240!3.32e-16!41;UBERON:0000956!2.77e-14!25;UBERON:0000203!2.77e-14!25;UBERON:0007023!5.21e-14!115;UBERON:0003056!1.33e-13!61;UBERON:0000073!1.50e-13!94;UBERON:0001016!1.50e-13!94;UBERON:0001950!2.76e-12!20;UBERON:0002619!3.50e-12!22;UBERON:0000033!2.20e-09!123;UBERON:0000153!1.43e-08!129;UBERON:0007811!1.43e-08!129;UBERON:0003076!2.87e-07!15;UBERON:0003057!2.87e-07!15|ontology_enrichment_uberon_v019=UBERON:0000956;7.19e-17;25!UBERON:0000203;7.19e-17;25!UBERON:0003528;6.86e-14;34!UBERON:0002020;6.86e-14;34!UBERON:0000073;1.60e-13;53!UBERON:0002616;1.60e-13;53!UBERON:0002619;1.63e-13;22!UBERON:0001869;5.33e-13;32!UBERON:0001950;3.30e-12;20!UBERON:0001893;9.09e-12;34!UBERON:0000988;4.62e-11;3!UBERON:0002791;7.17e-11;32!UBERON:0002780;1.27e-10;41!UBERON:0001890;1.27e-10;41!UBERON:0004733;1.18e-09;12!UBERON:0002028;1.18e-09;12!UBERON:0002298;2.26e-09;6!UBERON:0002680;2.62e-09;9!UBERON:0001895;2.62e-09;9!UBERON:0004732;7.38e-09;13!UBERON:0002148;4.49e-08;2!UBERON:0006331;4.49e-08;2!UBERON:0009662;4.49e-08;2!UBERON:0001872;4.20e-07;5|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.02e-22,53;UBERON:0002616,1.02e-22,53;UBERON:0001049,3.10e-21,56;UBERON:0005068,3.10e-21,56;UBERON:0006241,3.10e-21,56;UBERON:0007135,3.10e-21,56;UBERON:0003075,2.51e-19,82;UBERON:0007284,2.51e-19,82;UBERON:0002346,3.82e-18,86;UBERON:0000956,3.46e-17,25;UBERON:0000203,3.46e-17,25;UBERON:0003528,1.26e-16,34;UBERON:0002020,1.26e-16,34;UBERON:0000955,2.70e-16,68;UBERON:0006238,2.70e-16,68;UBERON:0003056,2.99e-15,61;UBERON:0001869,3.66e-15,32;UBERON:0002780,5.31e-15,41;UBERON:0001890,5.31e-15,41;UBERON:0003080,5.31e-15,41;UBERON:0006240,5.31e-15,41;UBERON:0001893,4.02e-14,34;UBERON:0010371,5.88e-14,104;UBERON:0002619,9.15e-14,22;UBERON:0010314,4.38e-13,132;UBERON:0002791,5.93e-13,32;UBERON:0001017,6.33e-13,81;UBERON:0001950,2.40e-12,20;UBERON:0001016,3.67e-11,89;UBERON:0000988,8.97e-11,3;UBERON:0004733,1.40e-09,12;UBERON:0002028,1.40e-09,12;UBERON:0007277,1.40e-09,12;UBERON:0002298,2.70e-09,6;UBERON:0002680,3.87e-09,9;UBERON:0001895,3.87e-09,9;UBERON:0010092,3.87e-09,9;UBERON:0004732,8.58e-09,13;UBERON:0002148,6.77e-08,2;UBERON:0006331,6.77e-08,2;UBERON:0009662,6.77e-08,2;UBERON:0003076,1.57e-07,15;UBERON:0003057,1.57e-07,15;UBERON:0001872,5.82e-07,5|phase1_expression=0.726713517082227,0.214100523890983,0.563817616383885,0,0.446961094427288,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,1.23121058076788,1.22400414746552,0.313454721478088,1.71741592278634,1.09499540058307,0.627713197974014,0,0,0.0787107813136792,1.57345710739562,2.30297638858328,1.23852898652861,0,0,0,0,0,0,0,0.601633342410425,0,0.447830948479849,0,0,0,0.377875943688809,0.242584061187816,0,0,0.309706370895104,0,0,0,0,0.645484683583826,0,0.376484679085209,0.272906150057846,0,0,0,0,0,0.199463657621632,0,0.290209238628584,0,0,0.251248665256743,0,0.217188844705117,0,0,0,0,0.212604299965044,0,0.22465726229299,0.150176892841506,0.32145117339416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80642697289893,1.33720097891754,0.434473211648397,2.43806866313962,0,0,0.361439152384566,1.50401373190767,0,2.3858578411533,1.45990461090791,2.83604451492204,0.665188192387692,1.05401742831751,0.327447688744282,0,0,0,0,0,0,0,0.371457501329565,0,0,0.347140501607594,0.56530794192401,0,0.275118041940067,0,0.258416759169329,0.71153252537342,0.33472061276467,0,0,0,0,0,0.267899184852239,0.224529372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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr19:8674670..8674700,+ | |||
|id=chr19:8674670..8674700,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000767;4.62e-11;3!CL:0000623;4.62e-11;3!CL:0000081;4.94e-11;11!CL:0002580;1.22e-10;3!CL:0000128;8.32e-08;7!CL:0000126;8.32e-08;7!CL:0000127;8.32e-08;7!CL:0002575;1.20e-07;2!CL:0000094;3.11e-07;8!CL:0002334;9.82e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000767,2.80e-11,3;CL:0000623,3.00e-11,3;CL:0000825,3.00e-11,3;CL:0000081,4.38e-11,11;CL:0002580,6.39e-11,3;CL:0000128,7.53e-08,7;CL:0000126,7.53e-08,7;CL:0000127,7.53e-08,7;CL:0002453,7.53e-08,7;CL:0002575,1.81e-07,2;CL:0000094,2.37e-07,8;CL:0002334,8.32e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!8.02e-23!57;UBERON:0005068!8.02e-23!57;UBERON:0006241!8.02e-23!57;UBERON:0007135!8.02e-23!57;UBERON:0002616!7.18e-21!59;UBERON:0003075!3.20e-18!86;UBERON:0007284!3.20e-18!86;UBERON:0000955!4.24e-18!69;UBERON:0006238!4.24e-18!69;UBERON:0001017!7.68e-18!82;UBERON:0002020!8.44e-18!34;UBERON:0003528!8.44e-18!34;UBERON:0001893!1.53e-17!34;UBERON:0002346!3.95e-17!90;UBERON:0005743!4.18e-17!86;UBERON:0002791!8.13e-17!33;UBERON:0003080!8.82e-17!42;UBERON:0001869!2.76e-16!32;UBERON:0002780!3.32e-16!41;UBERON:0001890!3.32e-16!41;UBERON:0006240!3.32e-16!41;UBERON:0000956!2.77e-14!25;UBERON:0000203!2.77e-14!25;UBERON:0007023!5.21e-14!115;UBERON:0003056!1.33e-13!61;UBERON:0000073!1.50e-13!94;UBERON:0001016!1.50e-13!94;UBERON:0001950!2.76e-12!20;UBERON:0002619!3.50e-12!22;UBERON:0000033!2.20e-09!123;UBERON:0000153!1.43e-08!129;UBERON:0007811!1.43e-08!129;UBERON:0003076!2.87e-07!15;UBERON:0003057!2.87e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000956;7.19e-17;25!UBERON:0000203;7.19e-17;25!UBERON:0003528;6.86e-14;34!UBERON:0002020;6.86e-14;34!UBERON:0000073;1.60e-13;53!UBERON:0002616;1.60e-13;53!UBERON:0002619;1.63e-13;22!UBERON:0001869;5.33e-13;32!UBERON:0001950;3.30e-12;20!UBERON:0001893;9.09e-12;34!UBERON:0000988;4.62e-11;3!UBERON:0002791;7.17e-11;32!UBERON:0002780;1.27e-10;41!UBERON:0001890;1.27e-10;41!UBERON:0004733;1.18e-09;12!UBERON:0002028;1.18e-09;12!UBERON:0002298;2.26e-09;6!UBERON:0002680;2.62e-09;9!UBERON:0001895;2.62e-09;9!UBERON:0004732;7.38e-09;13!UBERON:0002148;4.49e-08;2!UBERON:0006331;4.49e-08;2!UBERON:0009662;4.49e-08;2!UBERON:0001872;4.20e-07;5 | |||
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| |||
|short_description=p@chr19:8674670..8674700,+ | |||
}} |
Revision as of 23:02, 11 September 2013
Short description: | p@chr19:8674670..8674700, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:8674670..8674700, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
basophil | 2.80e-11 | 3 |
natural killer cell | 3.00e-11 | 3 |
pro-NK cell | 3.00e-11 | 3 |
blood cell | 4.38e-11 | 11 |
preadipocyte of the breast | 6.39e-11 | 3 |
oligodendrocyte | 7.53e-08 | 7 |
macroglial cell | 7.53e-08 | 7 |
astrocyte | 7.53e-08 | 7 |
oligodendrocyte precursor cell | 7.53e-08 | 7 |
central nervous system pericyte | 1.81e-07 | 2 |
granulocyte | 2.37e-07 | 8 |
preadipocyte | 8.32e-07 | 12 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.