FFCP PHASE1:Hg19::chr21:42798213..42798227,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=4599|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=7532|TSSclassifier=S|UniProt=|association_with_transcript=16bp_to_ENST00000478268_5end|description=CAGE_peak_6_at_MX1_5end|id=chr21:42798213..42798227,+|ontology_enrichment_celltype=CL:0002087!4.12e-11!119;CL:0000738!9.92e-11!140;CL:0002031!1.28e-09!124;CL:0002057!4.74e-09!42;CL:0000860!8.45e-08!45;CL:0000791!9.36e-08!18;CL:0000789!9.36e-08!18;CL:0002420!9.36e-08!18;CL:0002419!9.36e-08!18;CL:0000790!9.36e-08!18|ontology_enrichment_celltype_v019=CL:0000625;1.84e-07;11!CL:0000791;2.01e-07;18!CL:0000789;2.01e-07;18!CL:0002419;2.01e-07;18|ontology_enrichment_celltype_v019_2=CL:0000625,2.47e-07,11;CL:0000791,2.98e-07,18;CL:0000789,2.98e-07,18;CL:0002420,2.98e-07,18;CL:0002419,2.98e-07,18;CL:0000790,2.98e-07,18|ontology_enrichment_development_v019=CL:0000790;2.01e-07;18|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.92e-28!115;UBERON:0001049!3.83e-18!57;UBERON:0005068!3.83e-18!57;UBERON:0006241!3.83e-18!57;UBERON:0007135!3.83e-18!57;UBERON:0002780!1.75e-15!41;UBERON:0001890!1.75e-15!41;UBERON:0006240!1.75e-15!41;UBERON:0003080!8.37e-15!42;UBERON:0003075!1.05e-14!86;UBERON:0007284!1.05e-14!86;UBERON:0002616!3.36e-14!59;UBERON:0002346!1.04e-13!90;UBERON:0002020!1.21e-12!34;UBERON:0003528!1.21e-12!34;UBERON:0001893!1.34e-12!34;UBERON:0001869!5.80e-12!32;UBERON:0002791!6.67e-12!33;UBERON:0000955!1.62e-11!69;UBERON:0006238!1.62e-11!69;UBERON:0005743!2.04e-11!86;UBERON:0001017!2.41e-11!82;UBERON:0003056!3.29e-10!61;UBERON:0000073!3.64e-09!94;UBERON:0001016!3.64e-09!94;UBERON:0000956!5.98e-09!25;UBERON:0000203!5.98e-09!25;UBERON:0001950!2.36e-08!20;UBERON:0002619!3.19e-08!22;UBERON:0000153!5.82e-07!129;UBERON:0007811!5.82e-07!129|ontology_enrichment_uberon_v019=UBERON:0001869;9.75e-13;32!UBERON:0001893;5.13e-12;34!UBERON:0003528;5.81e-12;34!UBERON:0002020;5.81e-12;34!UBERON:0002791;3.15e-11;32!UBERON:0002780;1.13e-10;41!UBERON:0001890;1.13e-10;41!UBERON:0000369;1.72e-10;4!UBERON:0002435;1.72e-10;4!UBERON:0000204;1.72e-10;4!UBERON:0001950;1.80e-10;20!UBERON:0002619;2.26e-09;22!UBERON:0000073;1.28e-08;53!UBERON:0002616;1.28e-08;53!UBERON:0005383;2.18e-08;3!UBERON:0005382;2.18e-08;3!UBERON:0000956;4.79e-08;25!UBERON:0000203;4.79e-08;25!UBERON:0000955;1.43e-07;68!UBERON:0001017;2.28e-07;75!UBERON:0002420;4.50e-07;9!UBERON:0007245;4.50e-07;9!UBERON:0010009;4.50e-07;9!UBERON:0010011;4.50e-07;9!UBERON:0000454;4.50e-07;9!UBERON:0000125;4.94e-07;9!UBERON:0002308;4.94e-07;9|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.10e-15,53;UBERON:0002616,1.10e-15,53;UBERON:0002780,2.93e-15,41;UBERON:0001890,2.93e-15,41;UBERON:0003080,2.93e-15,41;UBERON:0006240,2.93e-15,41;UBERON:0001049,1.47e-14,56;UBERON:0005068,1.47e-14,56;UBERON:0006241,1.47e-14,56;UBERON:0007135,1.47e-14,56;UBERON:0007023,1.85e-14,114;UBERON:0001869,4.69e-14,32;UBERON:0000955,1.36e-13,68;UBERON:0006238,1.36e-13,68;UBERON:0003528,3.91e-13,34;UBERON:0002020,3.91e-13,34;UBERON:0001893,4.94e-13,34;UBERON:0001017,7.02e-13,81;UBERON:0002791,4.16e-12,32;UBERON:0003056,2.98e-11,61;UBERON:0001016,5.56e-11,89;UBERON:0001950,1.55e-10,20;UBERON:0000369,1.56e-10,4;UBERON:0002435,1.56e-10,4;UBERON:0000204,1.56e-10,4;UBERON:0010082,1.56e-10,4;UBERON:0003075,2.55e-10,82;UBERON:0007284,2.55e-10,82;UBERON:0002346,1.40e-09,86;UBERON:0002619,1.97e-09,22;UBERON:0005383,2.07e-08,3;UBERON:0005382,2.07e-08,3;UBERON:0000956,4.25e-08,25;UBERON:0000203,4.25e-08,25;UBERON:0010314,8.64e-08,132;UBERON:0010371,8.79e-08,104;UBERON:0002420,4.29e-07,9;UBERON:0007245,4.29e-07,9;UBERON:0010009,4.29e-07,9;UBERON:0010011,4.29e-07,9;UBERON:0000454,4.29e-07,9;UBERON:0000125,4.77e-07,9;UBERON:0002308,4.77e-07,9|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0.204000691244253,0,0.286235987131057,0.273748850145768,0.251085279189606,0.61130724598361,0.738905305049512,0.629686250509434,0.786728553697808,0,0.464448369948228,0,0,0,0,0,0.293600439334847,0,0.200544447470142,0.434021741431704,0.447830948479849,0,0,0.145398238779565,0,0.727752183563449,0.232429036905685,0.411167888021826,0.309706370895104,0.863077176966451,0.512321413058201,1.89185783910868,0,0,0,0,0.272906150057846,0.224723484445085,1.83650335422542,0,1.91801137739712,2.30895910130701,0.797854630486527,0.852449501065388,1.45104619314292,1.70215567407342,1.24564449799115,0.75374599577023,1.0429658368404,0.65156653411535,4.23779651843358,1.10483290796269,2.84816148696796,0,0.212604299965044,0,0.336985893439485,0.150176892841506,0.32145117339416,0,0,0.182664153764634,0,0.546138611262131,0,0.426730222566507,0,0,0,0,0.569212969109448,0,0.382273228125229,0,0,0.263384084775077,0.983548850569165,0.393010762749165,0.822405995998037,0.334372990781356,1.30368906653436,1.4203434172042,0,0.222820913770347,1.17842362989935,0.221533894583621,0.812411591295047,0.384273959177026,0.260118695119756,1.15106533222573,0.5527000355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0,0,0,0,0.203977659483963,0,0.275684698604535,0,0.227336094654718,0,1.65833887891756,0.930896962757057,0.639701945702943,0,0.193766729508018,0.248298857183432,0.224263725161227,1.52753179867596,0,0.217716747896961,0.342233301085281,0.202056159043763,0.215166616178029,0.332660356546013,0.0814032686109745,0.106727345877715,0,0.0898252021065869,0,0.488965776731466,0,0.665756774185513,0.402547587182052,1.9234109538194|short_description=p6@MX1}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=4599 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7532 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=16bp_to_ENST00000478268_5end | |||
|description=CAGE_peak_6_at_MX1_5end | |||
|id=chr21:42798213..42798227,+ | |||
|ontology_enrichment_celltype=CL:0002087!4.12e-11!119;CL:0000738!9.92e-11!140;CL:0002031!1.28e-09!124;CL:0002057!4.74e-09!42;CL:0000860!8.45e-08!45;CL:0000791!9.36e-08!18;CL:0000789!9.36e-08!18;CL:0002420!9.36e-08!18;CL:0002419!9.36e-08!18;CL:0000790!9.36e-08!18 | |||
|ontology_enrichment_celltype_v019=CL:0000625;1.84e-07;11!CL:0000791;2.01e-07;18!CL:0000789;2.01e-07;18!CL:0002419;2.01e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,2.47e-07,11;CL:0000791,2.98e-07,18;CL:0000789,2.98e-07,18;CL:0002420,2.98e-07,18;CL:0002419,2.98e-07,18;CL:0000790,2.98e-07,18 | |||
|ontology_enrichment_development_v019=CL:0000790;2.01e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.92e-28!115;UBERON:0001049!3.83e-18!57;UBERON:0005068!3.83e-18!57;UBERON:0006241!3.83e-18!57;UBERON:0007135!3.83e-18!57;UBERON:0002780!1.75e-15!41;UBERON:0001890!1.75e-15!41;UBERON:0006240!1.75e-15!41;UBERON:0003080!8.37e-15!42;UBERON:0003075!1.05e-14!86;UBERON:0007284!1.05e-14!86;UBERON:0002616!3.36e-14!59;UBERON:0002346!1.04e-13!90;UBERON:0002020!1.21e-12!34;UBERON:0003528!1.21e-12!34;UBERON:0001893!1.34e-12!34;UBERON:0001869!5.80e-12!32;UBERON:0002791!6.67e-12!33;UBERON:0000955!1.62e-11!69;UBERON:0006238!1.62e-11!69;UBERON:0005743!2.04e-11!86;UBERON:0001017!2.41e-11!82;UBERON:0003056!3.29e-10!61;UBERON:0000073!3.64e-09!94;UBERON:0001016!3.64e-09!94;UBERON:0000956!5.98e-09!25;UBERON:0000203!5.98e-09!25;UBERON:0001950!2.36e-08!20;UBERON:0002619!3.19e-08!22;UBERON:0000153!5.82e-07!129;UBERON:0007811!5.82e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;9.75e-13;32!UBERON:0001893;5.13e-12;34!UBERON:0003528;5.81e-12;34!UBERON:0002020;5.81e-12;34!UBERON:0002791;3.15e-11;32!UBERON:0002780;1.13e-10;41!UBERON:0001890;1.13e-10;41!UBERON:0000369;1.72e-10;4!UBERON:0002435;1.72e-10;4!UBERON:0000204;1.72e-10;4!UBERON:0001950;1.80e-10;20!UBERON:0002619;2.26e-09;22!UBERON:0000073;1.28e-08;53!UBERON:0002616;1.28e-08;53!UBERON:0005383;2.18e-08;3!UBERON:0005382;2.18e-08;3!UBERON:0000956;4.79e-08;25!UBERON:0000203;4.79e-08;25!UBERON:0000955;1.43e-07;68!UBERON:0001017;2.28e-07;75!UBERON:0002420;4.50e-07;9!UBERON:0007245;4.50e-07;9!UBERON:0010009;4.50e-07;9!UBERON:0010011;4.50e-07;9!UBERON:0000454;4.50e-07;9!UBERON:0000125;4.94e-07;9!UBERON:0002308;4.94e-07;9 | |||
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| |||
|short_description=p6@MX1 | |||
}} |
Revision as of 10:29, 12 September 2013
Short description: | p6@MX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_MX1_5end |
Coexpression cluster: | NA |
Association with transcript: | 16bp_to_ENST00000478268_5end |
EntrezGene: | MX1 |
HGNC: | 7532 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 2.47e-07 | 11 |
mature alpha-beta T cell | 2.98e-07 | 18 |
alpha-beta T cell | 2.98e-07 | 18 |
immature T cell | 2.98e-07 | 18 |
mature T cell | 2.98e-07 | 18 |
immature alpha-beta T cell | 2.98e-07 | 18 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.