FFCP PHASE1:Hg19::chr5:179507817..179507822,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C104|description=CAGE_peak_at_chr5:179507817..179507822,-|id=chr5:179507817..179507822,-|ontology_enrichment_celltype=CL:0000839!2.73e-18!70;CL:0000557!6.86e-18!71;CL:0000766!4.70e-16!76;CL:0000738!3.74e-15!140;CL:0000037!5.49e-15!172;CL:0000566!5.49e-15!172;CL:0002031!4.84e-14!124;CL:0002194!8.02e-14!63;CL:0000576!8.02e-14!63;CL:0000040!8.02e-14!63;CL:0000559!8.02e-14!63;CL:0000763!2.02e-13!112;CL:0000049!2.02e-13!112;CL:0000988!2.54e-13!182;CL:0002009!3.79e-13!65;CL:0002032!3.33e-12!165;CL:0000837!3.33e-12!165;CL:0002087!5.94e-12!119;CL:0002057!8.30e-12!42;CL:0000860!1.25e-10!45;CL:0002274!2.83e-10!5;CL:0000457!2.83e-10!5;CL:0002191!2.83e-10!5;CL:0000097!2.83e-10!5;CL:0000831!2.83e-10!5;CL:0002028!2.83e-10!5;CL:0002619!9.26e-07!3|ontology_enrichment_celltype_v019=CL:0000097;1.45e-33;5!CL:0002619;2.13e-20;3!CL:0000163;1.36e-18;9!CL:0000784;2.02e-09;3!CL:0000766;9.64e-09;69|ontology_enrichment_celltype_v019_2=CL:0000097,1.28e-33,5;CL:0002028,1.28e-33,5;CL:0002619,1.11e-20,3;CL:0000163,1.27e-18,9;CL:0000839,3.11e-16,66;CL:0000557,5.93e-16,67;CL:0000766,1.13e-14,72;CL:0000763,4.62e-12,108;CL:0000049,4.62e-12,108;CL:0000784,1.94e-09,3;CL:0002031,8.91e-08,120;CL:0000037,1.04e-07,168;CL:0000738,1.09e-07,136;CL:0002194,3.31e-07,59;CL:0000576,3.31e-07,59;CL:0000040,3.31e-07,59;CL:0000559,3.31e-07,59;CL:0000988,3.77e-07,177;CL:0002032,4.37e-07,161;CL:0000837,4.37e-07,161;CL:0002009,6.27e-07,61|ontology_enrichment_development_v019=UBERON:0001045;1.11e-07;1!UBERON:0005425;1.11e-07;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:9119;1.11e-07;1|ontology_enrichment_disease_v019_2=DOID:9119,6.10e-08,1|ontology_enrichment_uberon=UBERON:0002390!1.15e-22!102;UBERON:0003061!1.15e-22!102;UBERON:0002193!1.50e-21!112;UBERON:0007023!1.20e-17!115;UBERON:0002371!7.64e-16!80;UBERON:0001474!4.91e-14!86;UBERON:0002405!5.82e-14!115;UBERON:0004765!1.63e-10!101;UBERON:0001434!1.63e-10!101;UBERON:0003081!6.86e-07!216|ontology_enrichment_uberon_v019=UBERON:0001154;1.11e-07;1!UBERON:0000996;1.11e-07;1!UBERON:0000941;1.11e-07;1!UBERON:0001153;1.11e-07;1!UBERON:0002171;1.11e-07;1!UBERON:0001785;1.11e-07;1!UBERON:0002464;1.11e-07;1!UBERON:0004904;1.11e-07;1!UBERON:0009854;1.11e-07;1!UBERON:0001021;1.11e-07;1!UBERON:0006518;1.11e-07;1!UBERON:0008949;1.11e-07;1!UBERON:0000101;1.11e-07;1!UBERON:0002167;1.11e-07;1|ontology_enrichment_uberon_v019_2=UBERON:0002371,9.11e-14,76;UBERON:0002390,1.58e-13,98;UBERON:0003061,1.58e-13,98;UBERON:0001474,1.42e-12,82;UBERON:0002193,5.41e-12,108;UBERON:0004765,3.15e-11,90;UBERON:0002405,8.79e-11,93;UBERON:0001434,7.57e-10,100;UBERON:0000941,9.10e-08,1;UBERON:0001785,9.10e-08,1;UBERON:0002464,9.10e-08,1;UBERON:0004904,9.10e-08,1;UBERON:0001021,9.10e-08,1;UBERON:0003902,9.10e-08,1;UBERON:0005425,9.10e-08,1;UBERON:0000996,1.04e-07,1;UBERON:0002171,1.26e-07,1;UBERON:0006518,1.26e-07,1;UBERON:0008949,1.26e-07,1;UBERON:0000101,1.26e-07,1;UBERON:0002167,1.26e-07,1;UBERON:0001154,1.75e-07,1;UBERON:0001153,1.75e-07,1;UBERON:0001045,1.75e-07,1|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0.553995408531877,0,0.217010870715852,1.79132379391939,3.2389366601898,2.57575567634187,0.436194716338694,0.377875943688809,0.242584061187816,0.929716147622738,1.6446715520873,1.23882548358041,0,0.512321413058201,0,1.03423704220986,0,0,0.188242339542605,0.818718450173537,0.224723484445085,0,0.320929027076094,0,0,0,0,0.290209238628584,0,0,1.25624332628372,0,0.434377689410233,1.21079900526674,0.368277635987565,0.632924774881769,0,0.425208599930087,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0.263384084775077,0.196709770113833,0,0.411202997999018,0,0.977766799900771,0,0,0,0,0,0,0,0,0,0,0,0.889719378972363,0.535081656179426,0,0,0,0.34362744548263,0,0.318565414324097,0,0,0.150575119077773,0,0,0.473554504088034,0,0,0,0.724122019413995,0,0,0,0,0,0,0,0,0,0,0,2.16115474571226,0,0,0.324547393654683,0.174129737299267,0,1.19245312152671,1.71598473234038,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487894824518382,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468008530278475,0.297262324577456,0,0,0,0,0,0,1.47798971368783,2.0251139823042,22.1841083628626,40.7859468170001,13.634182810049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0.215627574859517,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33953315142039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C104 | |||
|description=CAGE_peak_at_chr5:179507817..179507822,- | |||
|id=chr5:179507817..179507822,- | |||
|ontology_enrichment_celltype=CL:0000839!2.73e-18!70;CL:0000557!6.86e-18!71;CL:0000766!4.70e-16!76;CL:0000738!3.74e-15!140;CL:0000037!5.49e-15!172;CL:0000566!5.49e-15!172;CL:0002031!4.84e-14!124;CL:0002194!8.02e-14!63;CL:0000576!8.02e-14!63;CL:0000040!8.02e-14!63;CL:0000559!8.02e-14!63;CL:0000763!2.02e-13!112;CL:0000049!2.02e-13!112;CL:0000988!2.54e-13!182;CL:0002009!3.79e-13!65;CL:0002032!3.33e-12!165;CL:0000837!3.33e-12!165;CL:0002087!5.94e-12!119;CL:0002057!8.30e-12!42;CL:0000860!1.25e-10!45;CL:0002274!2.83e-10!5;CL:0000457!2.83e-10!5;CL:0002191!2.83e-10!5;CL:0000097!2.83e-10!5;CL:0000831!2.83e-10!5;CL:0002028!2.83e-10!5;CL:0002619!9.26e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000097;1.45e-33;5!CL:0002619;2.13e-20;3!CL:0000163;1.36e-18;9!CL:0000784;2.02e-09;3!CL:0000766;9.64e-09;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,1.28e-33,5;CL:0002028,1.28e-33,5;CL:0002619,1.11e-20,3;CL:0000163,1.27e-18,9;CL:0000839,3.11e-16,66;CL:0000557,5.93e-16,67;CL:0000766,1.13e-14,72;CL:0000763,4.62e-12,108;CL:0000049,4.62e-12,108;CL:0000784,1.94e-09,3;CL:0002031,8.91e-08,120;CL:0000037,1.04e-07,168;CL:0000738,1.09e-07,136;CL:0002194,3.31e-07,59;CL:0000576,3.31e-07,59;CL:0000040,3.31e-07,59;CL:0000559,3.31e-07,59;CL:0000988,3.77e-07,177;CL:0002032,4.37e-07,161;CL:0000837,4.37e-07,161;CL:0002009,6.27e-07,61 | |||
|ontology_enrichment_development_v019=UBERON:0001045;1.11e-07;1!UBERON:0005425;1.11e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:9119;1.11e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:9119,6.10e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.15e-22!102;UBERON:0003061!1.15e-22!102;UBERON:0002193!1.50e-21!112;UBERON:0007023!1.20e-17!115;UBERON:0002371!7.64e-16!80;UBERON:0001474!4.91e-14!86;UBERON:0002405!5.82e-14!115;UBERON:0004765!1.63e-10!101;UBERON:0001434!1.63e-10!101;UBERON:0003081!6.86e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0001154;1.11e-07;1!UBERON:0000996;1.11e-07;1!UBERON:0000941;1.11e-07;1!UBERON:0001153;1.11e-07;1!UBERON:0002171;1.11e-07;1!UBERON:0001785;1.11e-07;1!UBERON:0002464;1.11e-07;1!UBERON:0004904;1.11e-07;1!UBERON:0009854;1.11e-07;1!UBERON:0001021;1.11e-07;1!UBERON:0006518;1.11e-07;1!UBERON:0008949;1.11e-07;1!UBERON:0000101;1.11e-07;1!UBERON:0002167;1.11e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,9.11e-14,76;UBERON:0002390,1.58e-13,98;UBERON:0003061,1.58e-13,98;UBERON:0001474,1.42e-12,82;UBERON:0002193,5.41e-12,108;UBERON:0004765,3.15e-11,90;UBERON:0002405,8.79e-11,93;UBERON:0001434,7.57e-10,100;UBERON:0000941,9.10e-08,1;UBERON:0001785,9.10e-08,1;UBERON:0002464,9.10e-08,1;UBERON:0004904,9.10e-08,1;UBERON:0001021,9.10e-08,1;UBERON:0003902,9.10e-08,1;UBERON:0005425,9.10e-08,1;UBERON:0000996,1.04e-07,1;UBERON:0002171,1.26e-07,1;UBERON:0006518,1.26e-07,1;UBERON:0008949,1.26e-07,1;UBERON:0000101,1.26e-07,1;UBERON:0002167,1.26e-07,1;UBERON:0001154,1.75e-07,1;UBERON:0001153,1.75e-07,1;UBERON:0001045,1.75e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0.553995408531877,0,0.217010870715852,1.79132379391939,3.2389366601898,2.57575567634187,0.436194716338694,0.377875943688809,0.242584061187816,0.929716147622738,1.6446715520873,1.23882548358041,0,0.512321413058201,0,1.03423704220986,0,0,0.188242339542605,0.818718450173537,0.224723484445085,0,0.320929027076094,0,0,0,0,0.290209238628584,0,0,1.25624332628372,0,0.434377689410233,1.21079900526674,0.368277635987565,0.632924774881769,0,0.425208599930087,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0.263384084775077,0.196709770113833,0,0.411202997999018,0,0.977766799900771,0,0,0,0,0,0,0,0,0,0,0,0.889719378972363,0.535081656179426,0,0,0,0.34362744548263,0,0.318565414324097,0,0,0.150575119077773,0,0,0.473554504088034,0,0,0,0.724122019413995,0,0,0,0,0,0,0,0,0,0,0,2.16115474571226,0,0,0.324547393654683,0.174129737299267,0,1.19245312152671,1.71598473234038,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487894824518382,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468008530278475,0.297262324577456,0,0,0,0,0,0,1.47798971368783,2.0251139823042,22.1841083628626,40.7859468170001,13.634182810049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0.215627574859517,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33953315142039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50630081242847,0,0,0,0,0,0,0.569647187174163,0,0.411362273086194,0,1.08006287447623,0.79312517629427,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0.280797178113459,0,0,2.50634477090067,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,1.99843180798692,0,0,0.73254089635947,0,0.222886768554957,0,0,0,0,0.994147647766298,0,0,0,0,0.19924798825107,1.10513566212459,0,0,0,0,0,0,0,0.0986434056369336,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.230850775511391,0,0,0,0,0,0,0,0,0.784901281975124,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,1.22206028986725,0,0,0,0.067401132980677,0,0,0,0,0,0.394584402849391,0,0,0,5.56196651833622,0.103688191397247,0,0,0,0,0,0,0.347119476670262,0,0,0.34945333648406,0.687944129886466,0,0,0,0.387956065953678,0,0,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.837847203816763,0.229160424011684,0,0,0.429226048136571,0,0.0671834724867263,0,0,0,0,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0.533937062838473,0,1.24271716604159,0.496166021811951,0.197611631897944,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.788617450012533,0,0,0,0.192687675289379,0,0,0.41023272848151,0,0,0,1.42769420259154,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0.313972371402056,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0,0,0,0,0,0.617393264863557,0.218559560503957,0,0.245148321753905,0,0.196308467114945,0,0,0,0.0939839179798536,0.128915775947154,0,0,0,0,0.730336388246517,0,0,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,6.66852544320507,7.23503151421682,0.829169439458779,0,0.213233981900981,0,0.193766729508018,0.496597714366863,0,0.0636471582781649,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,1.33151354837103,0.402547587182052,0 | |||
|short_description=p@chr5:179507817..179507822,- | |||
}} |
Revision as of 15:13, 13 September 2013
Short description: | p@chr5:179507817..179507822, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:179507817..179507822, - |
Coexpression cluster: | C104_Mast_Basophils_immature_CD14_CD34_eye_Natural |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 1.28e-33 | 5 |
basophil mast progenitor cell | 1.28e-33 | 5 |
adult endothelial progenitor cell | 1.11e-20 | 3 |
endocrine cell | 1.27e-18 | 9 |
myeloid lineage restricted progenitor cell | 3.11e-16 | 66 |
granulocyte monocyte progenitor cell | 5.93e-16 | 67 |
myeloid leukocyte | 1.13e-14 | 72 |
myeloid cell | 4.62e-12 | 108 |
common myeloid progenitor | 4.62e-12 | 108 |
plasmacytoid dendritic cell | 1.94e-09 | 3 |
hematopoietic lineage restricted progenitor cell | 8.91e-08 | 120 |
hematopoietic stem cell | 1.04e-07 | 168 |
leukocyte | 1.09e-07 | 136 |
monopoietic cell | 3.31e-07 | 59 |
monocyte | 3.31e-07 | 59 |
monoblast | 3.31e-07 | 59 |
promonocyte | 3.31e-07 | 59 |
hematopoietic cell | 3.77e-07 | 177 |
hematopoietic oligopotent progenitor cell | 4.37e-07 | 161 |
hematopoietic multipotent progenitor cell | 4.37e-07 | 161 |
macrophage dendritic cell progenitor | 6.27e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 9.11e-14 | 76 |
hematopoietic system | 1.58e-13 | 98 |
blood island | 1.58e-13 | 98 |
bone element | 1.42e-12 | 82 |
hemolymphoid system | 5.41e-12 | 108 |
skeletal element | 3.15e-11 | 90 |
immune system | 8.79e-11 | 93 |
skeletal system | 7.57e-10 | 100 |
cranial nerve II | 9.10e-08 | 1 |
cranial nerve | 9.10e-08 | 1 |
nerve trunk | 9.10e-08 | 1 |
nerve connecting eye with brain | 9.10e-08 | 1 |
nerve | 9.10e-08 | 1 |
retinal neural layer | 9.10e-08 | 1 |
presumptive neural retina | 9.10e-08 | 1 |
vagina | 1.04e-07 | 1 |
lower lobe of right lung | 1.26e-07 | 1 |
right lung lobe | 1.26e-07 | 1 |
lower lobe of lung | 1.26e-07 | 1 |
lobe of lung | 1.26e-07 | 1 |
right lung | 1.26e-07 | 1 |
vermiform appendix | 1.75e-07 | 1 |
caecum | 1.75e-07 | 1 |
midgut | 1.75e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
acute myeloid leukemia | 6.10e-08 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.