FFCP PHASE1:Hg19::chr6:169562989..169563008,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=|TSSclassifier=S|UniProt=|association_with_transcript=10bp_to_ENST00000439703_5end|coexpression_cluster_id=C2854|description=CAGE_peak_2_at_ENST00000439703_5end|id=chr6:169562989..169563008,-|ontology_enrichment_celltype=CL:0000055!2.67e-29!180;CL:0000057!4.14e-24!75;CL:0000680!4.86e-13!57;CL:0000056!4.86e-13!57;CL:0000355!4.86e-13!57;CL:0000144!5.68e-13!625;CL:0000222!1.07e-12!119;CL:0000048!5.76e-12!430;CL:0000548!5.79e-12!679;CL:0000004!5.79e-12!679;CL:0000255!5.79e-12!679;CL:0000187!6.54e-12!54;CL:0000012!1.47e-11!682;CL:0000723!4.08e-11!436;CL:0000183!5.92e-11!59;CL:0002494!5.99e-11!16;CL:0002371!3.89e-10!591;CL:0000034!4.82e-10!444;CL:0000077!1.04e-09!19;CL:0000393!2.14e-09!60;CL:0000211!2.14e-09!60;CL:0000359!2.92e-09!32;CL:0000192!3.24e-09!42;CL:0000514!3.24e-09!42;CL:0002620!3.56e-08!23;CL:0000003!5.59e-07!722;CL:0002334!7.07e-07!12|ontology_enrichment_celltype_v019=CL:0000359;4.97e-12;32!CL:0002494;8.73e-11;16!CL:0000077;8.04e-10;19!CL:0002620;7.36e-09;23!CL:0002595;9.57e-08;5!CL:0000192;1.23e-07;43|ontology_enrichment_celltype_v019_2=CL:0000057,5.40e-13,76;CL:0000359,9.13e-13,32;CL:0002494,8.46e-11,16;CL:0000077,8.21e-10,19;CL:0000222,1.21e-09,121;CL:0000680,1.42e-09,58;CL:0000056,1.42e-09,58;CL:0000355,1.42e-09,58;CL:0000187,2.21e-09,55;CL:0000192,5.36e-09,43;CL:0000514,5.36e-09,43;CL:0002620,9.28e-09,23;CL:0000048,6.44e-08,427;CL:0000393,8.11e-08,61;CL:0000211,8.11e-08,61;CL:0002595,1.19e-07,5;CL:0000723,1.70e-07,433;CL:0002321,2.03e-07,250;CL:0000034,5.87e-07,441|ontology_enrichment_development_v019=CL:0000514;1.23e-07;43|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000914!1.26e-15!83;UBERON:0002329!1.26e-15!83;UBERON:0003077!1.26e-15!83;UBERON:0003059!1.26e-15!83;UBERON:0007282!1.26e-15!83;UBERON:0009618!1.26e-15!83;UBERON:0007285!1.26e-15!83;UBERON:0004290!6.12e-13!70;UBERON:0001134!7.50e-13!61;UBERON:0002036!7.50e-13!61;UBERON:0003082!7.50e-13!61;UBERON:0002385!5.85e-12!63;UBERON:0001015!5.85e-12!63;UBERON:0000383!5.85e-12!63;UBERON:0000486!9.05e-12!82;UBERON:0004872!7.00e-11!84;UBERON:0001637!1.67e-10!42;UBERON:0003509!1.67e-10!42;UBERON:0004572!1.67e-10!42;UBERON:0000948!4.22e-10!24;UBERON:0005498!4.22e-10!24;UBERON:0004140!4.22e-10!24;UBERON:0009881!4.22e-10!24;UBERON:0004141!4.22e-10!24;UBERON:0003084!4.22e-10!24;UBERON:0007005!4.22e-10!24;UBERON:0004139!4.22e-10!24;UBERON:0004291!4.22e-10!24;UBERON:0004573!4.86e-10!33;UBERON:0004571!4.86e-10!33;UBERON:0007100!5.34e-09!27;UBERON:0002204!8.10e-08!167;UBERON:0004535!1.19e-07!110;UBERON:0002049!1.55e-07!79;UBERON:0007798!1.55e-07!79;UBERON:0001009!2.00e-07!113;UBERON:0001981!4.71e-07!60;UBERON:0007500!4.71e-07!60;UBERON:0004537!4.71e-07!60;UBERON:0006965!4.71e-07!60;UBERON:0005256!5.17e-07!143|ontology_enrichment_uberon_v019=UBERON:0000948;3.22e-08;22!UBERON:0004573;4.90e-08;33!UBERON:0004571;4.90e-08;33!UBERON:0003834;9.57e-08;5!UBERON:0001533;9.57e-08;5!UBERON:0007100;7.55e-07;25|ontology_enrichment_uberon_v019_2=UBERON:0007524,9.03e-10,73;UBERON:0004573,1.16e-09,33;UBERON:0004571,1.16e-09,33;UBERON:0002329,2.11e-09,71;UBERON:0003059,2.11e-09,71;UBERON:0007282,2.11e-09,71;UBERON:0004290,2.11e-09,71;UBERON:0009618,2.11e-09,71;UBERON:0001134,2.80e-09,62;UBERON:0002036,2.80e-09,62;UBERON:0003082,2.80e-09,62;UBERON:0003077,3.65e-09,72;UBERON:0007285,3.65e-09,72;UBERON:0002385,9.12e-09,64;UBERON:0001015,9.12e-09,64;UBERON:0000383,9.12e-09,64;UBERON:0000948,2.19e-08,24;UBERON:0005498,2.19e-08,24;UBERON:0004140,2.19e-08,24;UBERON:0009881,2.19e-08,24;UBERON:0004141,2.19e-08,24;UBERON:0003084,2.19e-08,24;UBERON:0007005,2.19e-08,24;UBERON:0004139,2.19e-08,24;UBERON:0004291,2.19e-08,24;UBERON:0000486,2.20e-08,83;UBERON:0004872,2.30e-08,83;UBERON:0001637,2.54e-08,42;UBERON:0003509,2.54e-08,42;UBERON:0004572,2.54e-08,42;UBERON:0007503,7.15e-08,78;UBERON:0003834,1.19e-07,5;UBERON:0001533,1.19e-07,5;UBERON:0007100,4.55e-07,27;UBERON:0002199,7.10e-07,46;UBERON:0002416,7.10e-07,46;UBERON:0004535,9.00e-07,109|phase1_expression=1.63510541343501,2.35510576280081,1.9733616573436,1.0007329835313,0.893922188854576,2.61701557230111,2.53299878168311,1.89515962028049,0,0,0,0.436882744260345,1.05506791291381,1.36142988256051,0.662794751455832,0,0,0.730310090387373,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.581592955118259,0.755751887377619,0.485168122375632,0.929716147622738,1.6446715520873,0.929119112685311,0,0,0.236482229888585,0.344745680736619,1.29096936716765,0,0.564727018627814,0.818718450173537,1.12361742222542,0,0,0,0,0.199463657621632,0.852449501065388,0,0,0.622822248995575,0.251248665256743,0.521482918420201,0,0,0.736555271975129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,0.670700859703636,1.79007586580942,0,2.00535164254356,0.144846518960824,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=10bp_to_ENST00000439703_5end | |||
|coexpression_cluster_id=C2854 | |||
|description=CAGE_peak_2_at_ENST00000439703_5end | |||
|id=chr6:169562989..169563008,- | |||
|ontology_enrichment_celltype=CL:0000055!2.67e-29!180;CL:0000057!4.14e-24!75;CL:0000680!4.86e-13!57;CL:0000056!4.86e-13!57;CL:0000355!4.86e-13!57;CL:0000144!5.68e-13!625;CL:0000222!1.07e-12!119;CL:0000048!5.76e-12!430;CL:0000548!5.79e-12!679;CL:0000004!5.79e-12!679;CL:0000255!5.79e-12!679;CL:0000187!6.54e-12!54;CL:0000012!1.47e-11!682;CL:0000723!4.08e-11!436;CL:0000183!5.92e-11!59;CL:0002494!5.99e-11!16;CL:0002371!3.89e-10!591;CL:0000034!4.82e-10!444;CL:0000077!1.04e-09!19;CL:0000393!2.14e-09!60;CL:0000211!2.14e-09!60;CL:0000359!2.92e-09!32;CL:0000192!3.24e-09!42;CL:0000514!3.24e-09!42;CL:0002620!3.56e-08!23;CL:0000003!5.59e-07!722;CL:0002334!7.07e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000359;4.97e-12;32!CL:0002494;8.73e-11;16!CL:0000077;8.04e-10;19!CL:0002620;7.36e-09;23!CL:0002595;9.57e-08;5!CL:0000192;1.23e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,5.40e-13,76;CL:0000359,9.13e-13,32;CL:0002494,8.46e-11,16;CL:0000077,8.21e-10,19;CL:0000222,1.21e-09,121;CL:0000680,1.42e-09,58;CL:0000056,1.42e-09,58;CL:0000355,1.42e-09,58;CL:0000187,2.21e-09,55;CL:0000192,5.36e-09,43;CL:0000514,5.36e-09,43;CL:0002620,9.28e-09,23;CL:0000048,6.44e-08,427;CL:0000393,8.11e-08,61;CL:0000211,8.11e-08,61;CL:0002595,1.19e-07,5;CL:0000723,1.70e-07,433;CL:0002321,2.03e-07,250;CL:0000034,5.87e-07,441 | |||
|ontology_enrichment_development_v019=CL:0000514;1.23e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.26e-15!83;UBERON:0002329!1.26e-15!83;UBERON:0003077!1.26e-15!83;UBERON:0003059!1.26e-15!83;UBERON:0007282!1.26e-15!83;UBERON:0009618!1.26e-15!83;UBERON:0007285!1.26e-15!83;UBERON:0004290!6.12e-13!70;UBERON:0001134!7.50e-13!61;UBERON:0002036!7.50e-13!61;UBERON:0003082!7.50e-13!61;UBERON:0002385!5.85e-12!63;UBERON:0001015!5.85e-12!63;UBERON:0000383!5.85e-12!63;UBERON:0000486!9.05e-12!82;UBERON:0004872!7.00e-11!84;UBERON:0001637!1.67e-10!42;UBERON:0003509!1.67e-10!42;UBERON:0004572!1.67e-10!42;UBERON:0000948!4.22e-10!24;UBERON:0005498!4.22e-10!24;UBERON:0004140!4.22e-10!24;UBERON:0009881!4.22e-10!24;UBERON:0004141!4.22e-10!24;UBERON:0003084!4.22e-10!24;UBERON:0007005!4.22e-10!24;UBERON:0004139!4.22e-10!24;UBERON:0004291!4.22e-10!24;UBERON:0004573!4.86e-10!33;UBERON:0004571!4.86e-10!33;UBERON:0007100!5.34e-09!27;UBERON:0002204!8.10e-08!167;UBERON:0004535!1.19e-07!110;UBERON:0002049!1.55e-07!79;UBERON:0007798!1.55e-07!79;UBERON:0001009!2.00e-07!113;UBERON:0001981!4.71e-07!60;UBERON:0007500!4.71e-07!60;UBERON:0004537!4.71e-07!60;UBERON:0006965!4.71e-07!60;UBERON:0005256!5.17e-07!143 | |||
|ontology_enrichment_uberon_v019=UBERON:0000948;3.22e-08;22!UBERON:0004573;4.90e-08;33!UBERON:0004571;4.90e-08;33!UBERON:0003834;9.57e-08;5!UBERON:0001533;9.57e-08;5!UBERON:0007100;7.55e-07;25 | |||
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| |||
|short_description=p2@ENST00000439703 | |||
}} |
Revision as of 19:25, 13 September 2013
Short description: | p2@ENST00000439703 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_ENST00000439703_5end |
Coexpression cluster: | C2854_mesothelioma_Smooth_liposarcoma_papillary_mesodermal_mesenchymal_Olfactory |
Association with transcript: | 10bp_to_ENST00000439703_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 5.40e-13 | 76 |
vascular associated smooth muscle cell | 9.13e-13 | 32 |
cardiocyte | 8.46e-11 | 16 |
mesothelial cell | 8.21e-10 | 19 |
mesodermal cell | 1.21e-09 | 121 |
muscle precursor cell | 1.42e-09 | 58 |
myoblast | 1.42e-09 | 58 |
multi-potent skeletal muscle stem cell | 1.42e-09 | 58 |
muscle cell | 2.21e-09 | 55 |
smooth muscle cell | 5.36e-09 | 43 |
smooth muscle myoblast | 5.36e-09 | 43 |
skin fibroblast | 9.28e-09 | 23 |
multi fate stem cell | 6.44e-08 | 427 |
electrically responsive cell | 8.11e-08 | 61 |
electrically active cell | 8.11e-08 | 61 |
smooth muscle cell of the subclavian artery | 1.19e-07 | 5 |
somatic stem cell | 1.70e-07 | 433 |
embryonic cell | 2.03e-07 | 250 |
stem cell | 5.87e-07 | 441 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.