FFCP PHASE1:Hg19::chr11:118479487..118479613,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr11:118479487..118479613,+ | |||
|id=chr11:118479487..118479613,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.52e-15!42;CL:0000860!1.26e-13!45;CL:0000048!1.43e-09!430;CL:0000723!1.96e-08!436;CL:0002320!4.76e-08!365;CL:0000134!9.15e-08!358;CL:0000034!1.65e-07!444;CL:0000057!7.41e-07!75 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.53e-20;33!CL:0002057;7.53e-20;33!CL:0000473;4.04e-12;39!CL:0000234;4.04e-12;39!CL:0000576;4.85e-09;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,6.48e-18,42;CL:0002057,6.48e-18,42;CL:0000473,1.46e-13,48;CL:0000234,1.46e-13,48;CL:0002320,9.76e-12,361;CL:0000048,1.45e-11,427;CL:0000134,1.84e-11,354;CL:0000723,1.29e-10,433;CL:0000034,7.05e-10,441;CL:0002009,2.85e-09,61;CL:0000557,7.76e-09,67;CL:0002194,1.74e-08,59;CL:0000576,1.74e-08,59;CL:0000040,1.74e-08,59;CL:0000559,1.74e-08,59;CL:0000766,8.93e-08,72;CL:0000839,9.37e-08,66;CL:0000219,1.27e-07,386;CL:0000136,3.66e-07,15 | |||
|ontology_enrichment_development_v019=CL:0002057;6.79e-14;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.42e-12!115;UBERON:0001049!1.43e-10!57;UBERON:0005068!1.43e-10!57;UBERON:0006241!1.43e-10!57;UBERON:0007135!1.43e-10!57;UBERON:0000479!1.29e-08!787;UBERON:0002616!1.47e-08!59;UBERON:0003080!3.04e-08!42;UBERON:0000025!4.23e-08!194;UBERON:0002204!5.54e-08!167;UBERON:0002384!5.67e-08!375;UBERON:0002780!7.13e-08!41;UBERON:0001890!7.13e-08!41;UBERON:0006240!7.13e-08!41;UBERON:0002020!1.57e-07!34;UBERON:0003528!1.57e-07!34;UBERON:0001893!3.02e-07!34;UBERON:0002791!3.55e-07!33;UBERON:0003075!5.73e-07!86;UBERON:0007284!5.73e-07!86;UBERON:0007100!5.81e-07!27;UBERON:0003081!7.22e-07!216;UBERON:0000955!7.78e-07!69;UBERON:0006238!7.78e-07!69 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.53e-12,114;UBERON:0002384,2.09e-11,371;UBERON:0000926,1.97e-10,315;UBERON:0004120,1.97e-10,315;UBERON:0006603,1.97e-10,315;UBERON:0001049,5.81e-10,56;UBERON:0005068,5.81e-10,56;UBERON:0006241,5.81e-10,56;UBERON:0007135,5.81e-10,56;UBERON:0002371,2.23e-09,76;UBERON:0003081,2.48e-09,203;UBERON:0000479,4.46e-09,773;UBERON:0000073,5.14e-09,53;UBERON:0002616,5.14e-09,53;UBERON:0001474,1.56e-08,82;UBERON:0003528,1.38e-07,34;UBERON:0002020,1.38e-07,34;UBERON:0002780,1.43e-07,41;UBERON:0001890,1.43e-07,41;UBERON:0003080,1.43e-07,41;UBERON:0006240,1.43e-07,41;UBERON:0002204,1.86e-07,167;UBERON:0003075,1.94e-07,82;UBERON:0007284,1.94e-07,82;UBERON:0004765,2.07e-07,90;UBERON:0001893,2.84e-07,34;UBERON:0002405,3.32e-07,93;UBERON:0010314,5.24e-07,132;UBERON:0002346,8.58e-07,86 | |||
|phase1_expression=7.99384868790449,5.99481466894753,5.21531295155093,2.00146596706261,2.68176656656373,1.74467704820074,0,30.3225539244879,28.9916047301821,0,0,0,0,1.8564952944007,1.32558950291166,0.672325146451775,0,0,0.975865597581014,0.369363174230364,0,0.626909442956176,0.286235987131057,0.273748850145768,0.502170558379211,0,0,0,5.90046415273356,1.91914699048606,8.51488678238418,0,0.30120591877825,0,0,0.142169232487422,0,9.41792194504192,9.6261334785668,2.82114131930607,0,0,0,2.03557534291391,9.44689859222024,5.57943340731977,19.2916100631718,83.8782491564525,141.845517869957,93.787719897021,90.1685686982434,97.9036431738743,106.871161028352,280.140352675381,314.189448898873,17.8830222565474,38.7526733082141,29.6634999467512,78.9696442316929,165.278448944188,241.030096426239,4.28806690242731,16.3560199249738,6.81959600852311,74.5837743275461,167.946026508577,182.486918955703,88.4395301703736,104.29658368404,92.3052589996746,34.507771650102,229.80524485624,174.054313092486,1.47878700418359,0.850417199860174,0,1.23561494261145,0.150176892841506,0.32145117339416,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0.587237189370939,1.14681968437569,1.32171328579026,1.12101712596307,0,1.96709770113833,3.53709686474248,4.11202997999018,0,6.51844533267181,4.2610302516126,0,0,1.17842362989935,0.221533894583621,0.812411591295047,0.128091319725675,0,0,0,0,4.44859689486181,2.1403266247177,1.04535523804977,0,1.14966148080576,1.03088233644789,0.759059076058509,0,0.651083453856419,0,0,0,0,0.236777252044017,0,2.21767417547206,1.87208137048455,1.59306844271079,14.6284119788377,2.01210257911091,1.79007586580942,9.75885711438329,3.00802746381534,1.73815822752988,12.7245751528176,4.86634870302636,0.0945348171640679,0,0.087834785693126,2.48860243445654,0,0,0,0,0,0,1.71598473234038,0,0.596287222100115,0.860234595106124,1.38856200643038,2.26123176769604,0,0.825354125820202,0.417989933073621,1.29208379584664,0.71153252537342,0,0.402829317109147,0,0.732186172644509,0.367663080345869,2.43042584364528,0.357198913136319,0.898117490504679,1.46394924628319,4.5994991239765,3.79706263827252,2.5648244150257,0,0,0,3.47880366186723,1.13967460498122,4.10468460520978,6.88407889797153,2.4826786753885,1.68203280042692,5.33744978648525,0.98667019366864,4.04574346019696,1.21239604862719,2.61539044981534,0.302714855289863,0.576175924479999,0,1.87296046098192,1.71141546463335,5.08125513876124,0.117434498643765,0.809364721840658,0.421352420106746,1.02077085627447,0,0.723280468230358,0,0.741800787835671,16.3829045148845,3.59309070908119,0.168336113954066,0.375355559615893,2.49357703935765,0,0.30648779579902,0.45071417671979,0.907457465280168,1.4351170855109,1.70845911054854,3.39091041855299,1.80054657650641,2.37020817248409,2.83404594050192,2.60563598864226,3.03797398034279,3.70260619612555,3.02920529092937,1.65689817556139,2.26304479546337,2.84007674013291,1.61203357164224,2.37384829234683,0,0,0,0,0,0,0.10366105501537,0,0,1.56449532329816,0.643240938192885,0,0.464367928031979,0.721879481669586,0.118306800039844,0.505754070234305,0.482022059766964,0.330881918197182,0.435758888184812,0.237270619111097,0.404493924480493,0.588664395376038,0.38474715694639,0,1.40241773803446,3.2925920906512,4.41026134156626,0,0,0.590789906681404,0,0,0,0,0,0.100528972411631,0,0.651616610620649,1.03993478527958,0,0.115930404975077,1.40890433082986,0.288732895522148,0,0.190254152234598,0,0,0,0,0,0,0,0.141775097242386,0,0,0,61.090241499097,0,1.24396869324463,0.576479813667846,1.64115163454294,0.126995788584338,0,0,1.71072446022705,0.205654985406647,0,0.285826432630578,1.68196626518041,0.87192013766656,1.10007428731425,0.646358578788889,28.6125156681506,1.690605505112,3.72313363218819,3.12022310734098,1.28603687131071,0,1.5985330740966,10.2944155433866,1.62786481617433,1.64648067356154,2.28015329005615,4.26470338491055,0,0.301439377059586,0,1.09970290300263,0,0,0,4.0736225433569,6.89171615004683,0,2.75084482668401,0.61642896765115,0.179060963239896,0.448340575974109,1.57624608161542,2.58753089831421,2.05348858047597,1.27047312111232,1.30139853857622,0,0.335032530668698,0.637938751653163,0,0,0.828831026872071,1.2269149171914,0,0.813795071099207,1.03985430765404,0.892144943985809,1.10391690523754,1.05427273493442,3.31040709700491,0,2.0694614258501,1.32845119707087,0.553107505625109,1.56390506042549,2.15381273209015,1.37257369524342,3.3082884179662,4.74571241800957,5.97674323699288,0,0,0,6.94701861892575,6.29194090481056,1.68396056659844,6.02254001501795,7.67560873600055,3.37793234401576,2.96836132889982,1.07946785661859,1.06537035187876,1.31403449622095,4.15403543346897,1.16210378459959,0.120859449591622,0,0.0920809889358963,1.83703117063371,2.00300284807389,3.01586154406675,0.451199612907412,0.15403067420883,2.35304930753057,0,1.05551628892876,0,1.36074964221213,1.51141141271498,3.08454505380579,2.43851793789468,2.00675909541941,0,0,0.671624264166535,0,0,0,0.328014645699706,0.650756789328606,3.09123034943167,0.366277859273374,0.330037999682352,1.14853107599234,0,3.21367859688319,2.03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| |||
|short_description=p@chr11:118479487..118479613,+ | |||
}} |
Revision as of 10:39, 11 January 2014
Short description: | p@chr11:118479487..118479613, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:118479487..118479613, + |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 6.48e-18 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.48e-18 | 42 |
defensive cell | 1.46e-13 | 48 |
phagocyte | 1.46e-13 | 48 |
connective tissue cell | 9.76e-12 | 361 |
multi fate stem cell | 1.45e-11 | 427 |
mesenchymal cell | 1.84e-11 | 354 |
somatic stem cell | 1.29e-10 | 433 |
stem cell | 7.05e-10 | 441 |
macrophage dendritic cell progenitor | 2.85e-09 | 61 |
granulocyte monocyte progenitor cell | 7.76e-09 | 67 |
monopoietic cell | 1.74e-08 | 59 |
monocyte | 1.74e-08 | 59 |
monoblast | 1.74e-08 | 59 |
promonocyte | 1.74e-08 | 59 |
myeloid leukocyte | 8.93e-08 | 72 |
myeloid lineage restricted progenitor cell | 9.37e-08 | 66 |
motile cell | 1.27e-07 | 386 |
fat cell | 3.66e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.53e-12 | 114 |
connective tissue | 2.09e-11 | 371 |
mesoderm | 1.97e-10 | 315 |
mesoderm-derived structure | 1.97e-10 | 315 |
presumptive mesoderm | 1.97e-10 | 315 |
neural tube | 5.81e-10 | 56 |
neural rod | 5.81e-10 | 56 |
future spinal cord | 5.81e-10 | 56 |
neural keel | 5.81e-10 | 56 |
bone marrow | 2.23e-09 | 76 |
lateral plate mesoderm | 2.48e-09 | 203 |
tissue | 4.46e-09 | 773 |
regional part of nervous system | 5.14e-09 | 53 |
regional part of brain | 5.14e-09 | 53 |
bone element | 1.56e-08 | 82 |
brain grey matter | 1.38e-07 | 34 |
gray matter | 1.38e-07 | 34 |
regional part of forebrain | 1.43e-07 | 41 |
forebrain | 1.43e-07 | 41 |
anterior neural tube | 1.43e-07 | 41 |
future forebrain | 1.43e-07 | 41 |
musculoskeletal system | 1.86e-07 | 167 |
neural plate | 1.94e-07 | 82 |
presumptive neural plate | 1.94e-07 | 82 |
skeletal element | 2.07e-07 | 90 |
telencephalon | 2.84e-07 | 34 |
immune system | 3.32e-07 | 93 |
structure with developmental contribution from neural crest | 5.24e-07 | 132 |
neurectoderm | 8.58e-07 | 86 |