FFCP PHASE1:Hg19::chr12:112036874..112036883,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6311 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10555 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-8bp_to_ENST00000549455_5end | |||
|description=CAGE_peak_8_at_ATXN2_5end | |||
|id=chr12:112036874..112036883,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!7.19e-13!57;UBERON:0005068!7.19e-13!57;UBERON:0006241!7.19e-13!57;UBERON:0007135!7.19e-13!57;UBERON:0007023!5.07e-12!115;UBERON:0000955!5.36e-12!69;UBERON:0006238!5.36e-12!69;UBERON:0005743!7.80e-12!86;UBERON:0001017!1.35e-11!82;UBERON:0002616!2.54e-11!59;UBERON:0001893!2.98e-11!34;UBERON:0003075!4.61e-11!86;UBERON:0007284!4.61e-11!86;UBERON:0002346!5.26e-11!90;UBERON:0002791!1.24e-10!33;UBERON:0003080!1.25e-10!42;UBERON:0001869!2.06e-10!32;UBERON:0002020!2.27e-10!34;UBERON:0003528!2.27e-10!34;UBERON:0002780!3.62e-10!41;UBERON:0001890!3.62e-10!41;UBERON:0006240!3.62e-10!41;UBERON:0000073!1.16e-09!94;UBERON:0001016!1.16e-09!94;UBERON:0002619!4.37e-09!22;UBERON:0000033!4.50e-09!123;UBERON:0003056!1.55e-08!61;UBERON:0000153!1.66e-08!129;UBERON:0007811!1.66e-08!129;UBERON:0001950!2.61e-08!20;UBERON:0000956!2.36e-07!25;UBERON:0000203!2.36e-07!25;UBERON:0000924!3.06e-07!173;UBERON:0006601!3.06e-07!173;UBERON:0004121!3.76e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;5.52e-15;32!UBERON:0001950;1.13e-14;20!UBERON:0001893;8.91e-14;34!UBERON:0002619;2.72e-13;22!UBERON:0002780;3.24e-13;41!UBERON:0001890;3.24e-13;41!UBERON:0002791;1.09e-12;32!UBERON:0000956;1.29e-11;25!UBERON:0000203;1.29e-11;25!UBERON:0003528;6.84e-11;34!UBERON:0002020;6.84e-11;34!UBERON:0000073;3.87e-09;53!UBERON:0002616;3.87e-09;53!UBERON:0000200;2.65e-08;6!UBERON:0001870;7.86e-08;3!UBERON:0003112;6.03e-07;1!UBERON:0011158;6.03e-07;1!UBERON:0003128;6.03e-07;1!UBERON:0001703;6.03e-07;1!UBERON:0002241;6.03e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,7.03e-20,56;UBERON:0005068,7.03e-20,56;UBERON:0006241,7.03e-20,56;UBERON:0007135,7.03e-20,56;UBERON:0000073,1.67e-18,53;UBERON:0002616,1.67e-18,53;UBERON:0002780,3.13e-18,41;UBERON:0001890,3.13e-18,41;UBERON:0003080,3.13e-18,41;UBERON:0006240,3.13e-18,41;UBERON:0001869,6.39e-17,32;UBERON:0003075,3.43e-16,82;UBERON:0007284,3.43e-16,82;UBERON:0001893,7.86e-16,34;UBERON:0010314,1.76e-15,132;UBERON:0002346,2.90e-15,86;UBERON:0001950,1.42e-14,20;UBERON:0002791,6.79e-14,32;UBERON:0010371,1.57e-13,104;UBERON:0000955,1.57e-13,68;UBERON:0006238,1.57e-13,68;UBERON:0003056,2.21e-13,61;UBERON:0002619,3.35e-13,22;UBERON:0003528,5.38e-13,34;UBERON:0002020,5.38e-13,34;UBERON:0001017,1.48e-12,81;UBERON:0000956,1.55e-11,25;UBERON:0000203,1.55e-11,25;UBERON:0001016,5.41e-11,89;UBERON:0007023,1.34e-09,114;UBERON:0004121,1.83e-09,171;UBERON:0000924,1.83e-09,171;UBERON:0006601,1.83e-09,171;UBERON:0000200,4.40e-08,6;UBERON:0011216,5.42e-08,223;UBERON:0001870,1.15e-07,3;UBERON:0003112,6.23e-07,1;UBERON:0011158,6.23e-07,1;UBERON:0003128,6.23e-07,1;UBERON:0001703,6.23e-07,1;UBERON:0002241,6.23e-07,1;UBERON:0004761,6.23e-07,1;UBERON:0009617,6.23e-07,1 | |||
|phase1_expression=0.726713517082227,0,1.12763523276777,0,0,0,0,0.631719873426831,0,0,0.697801167972428,0.218441372130172,0,0.495065411840187,0.662794751455832,0,0,0,0,0.123121058076788,0.204000691244253,0,0,0,0.125542639594803,0.534893840235659,0.0821005894499457,0,0,0,0.309632246632152,0.919421224478927,0,0,0.309868802321207,0.142169232487422,0,0,0,0.434021741431704,0.447830948479849,0.647787332037959,0.77272670290256,0.436194716338694,0,0.485168122375632,0.232429036905685,0,0.309706370895104,0,0,0,0,0,0,0.188242339542605,0.545812300115692,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0.217188844705117,0.605399502633369,0,0,0.211255286311942,0,0,0,0,0.16072558669708,0,0,0.182664153764634,0,0,0,0,0,0.574752439954483,0,0,0,0,0.764546456250458,0,0.560508562981536,0,0,0,0.205601498999509,0.334372990781356,0.32592226663359,0,0,0.111410456885174,0,0.221533894583621,0,0.384273959177026,0.130059347559878,0.328875809207352,0.276350017785848,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0.434473211648397,2.43806866313962,0.670700859703636,0,0,1.00267582127178,0.144846518960824,0,0,0.283604451492204,0,0.263504357079378,0.851363990735132,0.364295288292542,0,0.324547393654683,0.174129737299267,0.26591592103773,0,0,0,0.198762407366705,0,0,0,0.419499436209906,0.550236083880135,0,0,0.35576626268671,0.33472061276467,0,0,0.488124115096339,0.735326160691737,0,0.535798369704479,0.22452937262617,0.675668882899933,0,0,0.183201743930407,0,0,0,0.496971951695318,0.12663051166458,0.132409180813219,0.573673241497627,0,0,1.06748995729705,0.49333509683432,0.622422070799533,0.134710672069688,0.163461903113459,0.302714855289863,0,0.937285727335186,0,0.570471821544449,0.149448680551801,0.117434498643765,0,0,0.408308342509787,0.122834317311768,0.103325781175765,0,0.494533858557114,0,0.718618141816238,0.168336113954066,0,0,0,0.30648779579902,0.300476117813194,0,0.717558542755448,0.427114777637135,0.423863802319124,0,0.618315175430633,0.515281080091258,0.18611685633159,0.506328996723799,0.0974370051611986,0.504867548488229,0.460249493211497,0.161646056818812,0.355009592516614,0.302256294682921,0,0,0.272746120590835,0,0.243947412259191,0,0.232387885739037,0.207322110030741,0,0.36497735907583,0,1.28648187638577,0,0,0,0.236613600079688,0.337169380156203,0,0.220587945464788,0,0.237270619111097,0.134831308160164,0.196221465125346,0,0,0,0,1.47008711385542,0,0,0,0.441463099414651,0,0,0.109750285408626,0,0.201057944823262,0,0.325808305310325,1.03993478527958,0,0,0.117408694235822,0.144366447761074,0,0,0,0.858486162094873,0,0,0.148631162288728,0,0.335964256397719,0,0.179117045405697,0,0,0,0.264145302039678,0.829312462163088,0.576479813667846,0.12624243342638,0.317489471460845,0.381988425558278,1.17217447210047,0,0.102827492703324,0.300343057843917,0,0.448524337381443,0,0.2933531432838,0.646358578788889,0,1.690605505112,0.531876233169741,1.04007436911366,0,0,0.266422179016099,0,0,0,0,0,0,0.602878754119172,0,0.399891964728228,0,0.502257091432126,0,0,0,0,0.434343920002738,0.205476322550383,0.179060963239896,0,0.197030760201927,0,0,0.254094624222463,0,0,0.167516265334349,0.637938751653163,0,0,0,0.24538298343828,0,0,0,0.178428988797162,0.315404830067869,0.585707074963566,0,0,0,0,0.368738337083406,0.0868836144680828,0.587403472388222,0.343143423810856,0.206768026122887,0.215714200818617,0,0.303127571446259,0,0.604780586659361,0.496215615637554,0.920771839728375,1.12264037773229,0,0,0.321707842287215,1.48418066444991,0,0.177561725313127,0.0821271560138091,0,0.116210378459959,0,0,0.368323955743585,0.114814448164607,0,0,0,0.15403067420883,0,0,0.105551628892876,0,0,0,0,0,0.501689773854853,0,0,0.671624264166535,0.219259876645935,0,0,0.328014645699706,0.325378394664303,0.206082023295445,0.183138929636687,0.247528499761764,0,0,0,0.193341436584244,0,0,0.275673144969061,0,0,0.170453254832202,0.0890320356467374,0.330569830721956,0.192190067365106,0.638063562472921,0.10115778085555,0,0,0.6970372701606,0.308033580176089,0,0,0,0.143124886741991,0.744316738719335,0.316379424718726,0,0.255897791311334,0.42793898803392,0.318203247925937,0,0.179872457583315,0,0,0,0,0,0,0.487426979262569,0,0.136499911407986,0.282810863907425,1.13008116620243,0,0,0.876901770507525,1.73632660280006,0,0.405820753925408,0,0.281695602532241,0,0.196498082026242,0.35667105148125,0,0.633322905892992,0.329294892959902,0.379473173765715,0,0,0,0,0.188287601553558,0,0,0.886860307073351,0.689170200620878,0,0,0,0.476463550915578,0,0,0,0.79312517629427,0,0,0,0.185803175125719,0,0.0711418433484141,0,0,0,0,0,0,0,0.156679895773023,0,0,0.481764225311099,0.201799707191048,0,0,0,0,0.333698283423817,0.19538809540204,0.556812347790485,0,0,0.33307196799782,0,0.18714054040822,0.146508179271894,0.242721043499027,0.222886768554957,0,0,0.296964680832639,0.614321404198464,0,0.140669416410513,0.111308705022906,0.16480387422676,0,0,0.552567831062295,0,0.306806047506464,0.123084805461069,0,0.0898683511473268,0,0,0.0986434056369336,0,0,0.969332746095218,0.834912883456661,0,0.260427761085233,0.349839999984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| |||
|short_description=p8@ATXN2 | |||
}} |
Revision as of 15:56, 11 January 2014
Short description: | p8@ATXN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_ATXN2_5end |
Coexpression cluster: | NA |
Association with transcript: | -8bp_to_ENST00000549455_5end |
EntrezGene: | ATXN2 |
HGNC: | 10555 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data