FFCP PHASE1:Hg19::chr17:1655912..1656009,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr17:1655912..1656009,+ | |||
|id=chr17:1655912..1656009,+ | |||
|ontology_enrichment_celltype=CL:0002009!2.59e-16!65;CL:0000557!1.11e-15!71;CL:0002194!5.19e-15!63;CL:0000576!5.19e-15!63;CL:0000040!5.19e-15!63;CL:0000559!5.19e-15!63;CL:0000839!4.29e-13!70;CL:0000766!7.58e-13!76;CL:0000763!2.14e-12!112;CL:0000049!2.14e-12!112;CL:0000451!3.55e-10!10;CL:0000860!1.61e-09!45;CL:0000738!4.59e-09!140;CL:0000990!1.56e-08!8;CL:0000037!2.70e-08!172;CL:0000566!2.70e-08!172;CL:0002057!2.92e-08!42;CL:0000066!8.61e-08!254;CL:0000223!9.86e-08!59;CL:0000988!2.88e-07!182;CL:0002087!3.35e-07!119;CL:0002076!8.10e-07!43;CL:0002032!8.10e-07!165;CL:0000837!8.10e-07!165 | |||
|ontology_enrichment_celltype_v019=CL:0000451;2.16e-16;10!CL:0000990;1.50e-13;8!CL:0000840;1.41e-09;5!CL:0002368;5.72e-09;13!CL:0000453;2.06e-08;5!CL:0000235;6.88e-08;6!CL:0000473;1.18e-07;39!CL:0000234;1.18e-07;39!CL:0002076;1.98e-07;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0000451,1.86e-16,10;CL:0000990,1.28e-13,8;CL:0002009,3.10e-11,61;CL:0000557,3.20e-10,67;CL:0000223,8.50e-10,58;CL:0002194,1.16e-09,59;CL:0000576,1.16e-09,59;CL:0000040,1.16e-09,59;CL:0000559,1.16e-09,59;CL:0000840,1.20e-09,5;CL:0001029,1.20e-09,5;CL:0002368,5.23e-09,13;CL:0002076,6.15e-09,42;CL:0000453,2.05e-08,5;CL:0000763,2.82e-08,108;CL:0000049,2.82e-08,108;CL:0000235,3.42e-08,6;CL:0000766,6.26e-08,72;CL:0000839,7.47e-08,66;CL:0000066,1.96e-07,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!9.60e-07!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.56e-12!102;UBERON:0003061!1.56e-12!102;UBERON:0002371!2.36e-12!80;UBERON:0002193!5.93e-12!112;UBERON:0002405!8.18e-12!115;UBERON:0007023!9.71e-12!115;UBERON:0004119!6.20e-11!169;UBERON:0000925!6.20e-11!169;UBERON:0006595!6.20e-11!169;UBERON:0001474!7.12e-11!86;UBERON:0000062!1.63e-10!511;UBERON:0000077!5.60e-09!130;UBERON:0001041!6.51e-09!98;UBERON:0004921!6.68e-09!129;UBERON:0004185!6.68e-09!129;UBERON:0004765!8.16e-09!101;UBERON:0001434!8.16e-09!101;UBERON:0001007!8.77e-09!155;UBERON:0001555!8.77e-09!155;UBERON:0007026!8.77e-09!155;UBERON:0000065!3.69e-08!53;UBERON:0008947!2.18e-07!38;UBERON:0003258!2.18e-07!38;UBERON:0000922!2.91e-07!612;UBERON:0001004!5.57e-07!72 | |||
|ontology_enrichment_uberon_v019=UBERON:0000065;4.73e-09;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000065,5.15e-11,54;UBERON:0001041,5.28e-11,87;UBERON:0004119,5.74e-10,160;UBERON:0000925,5.74e-10,160;UBERON:0006595,5.74e-10,160;UBERON:0008947,9.54e-10,38;UBERON:0003258,9.54e-10,38;UBERON:0002390,1.58e-09,98;UBERON:0003061,1.58e-09,98;UBERON:0002193,4.58e-09,108;UBERON:0004921,7.86e-09,118;UBERON:0001004,8.78e-09,74;UBERON:0002371,1.05e-08,76;UBERON:0001007,3.42e-08,145;UBERON:0001555,3.42e-08,145;UBERON:0007026,3.42e-08,145;UBERON:0001474,3.64e-08,82;UBERON:0002405,3.64e-08,93;UBERON:0004765,2.49e-07,90;UBERON:0005178,2.60e-07,34;UBERON:0002224,2.60e-07,34;UBERON:0005181,5.66e-07,35 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0.873765488520689,1.31883489114227,0.123766352960047,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0.229240217243854,0.246301768349837,0,0.786728553697808,1.53531759238885,1.85779347979291,2.75826367343678,4.51808878167375,4.06729411183466,0.0774672005803016,0,1.46800219667424,0.553995408531877,0.200544447470142,0.434021741431704,5.37397138175818,3.2389366601898,1.80302897343931,2.4717700592526,2.64513160582167,1.94067248950253,0.929716147622738,1.6446715520873,0,0.575384784644301,0.512321413058201,0.236482229888585,0.344745680736619,0.645484683583826,1.35426486594342,1.31769637679823,0.545812300115692,1.34834090667051,0.918251677112708,1.28371610830437,0.639337125799041,1.31940520074686,2.19410023383795,1.27867425159808,0.290209238628584,0,0,1.00499466102697,0.521482918420201,1.08594422352558,0,0.368277635987565,0.632924774881769,0.845021145247767,0.212604299965044,0.419317291016752,3.48218756554135,1.95229960693958,1.6072558669708,0.285012743741249,0,0,1.75996244461323,0,0,0.426730222566507,0.400395987036012,0.574752439954483,0.661044872784862,0.954053754535364,0,0,0,1.32171328579026,1.12101712596307,1.31692042387539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0.301150238155546,0.895906278080929,0,0.236777252044017,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0.087834785693126,1.0478326039817,3.27865759463288,2.22470665670658,6.49094787309367,8.18409765306556,2.92507513141503,33.6271780270532,17.731842234184,29.7166001063652,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0.24406205754817,0,0,0.0892997282840798,0,0,0,0,0.183201743930407,0,0,6.54141078213801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0,3.09217365061275,2.18196896472668,2.29443676311203,1.34171076742555,1.19276791489337,0.580969714347592,0.621966330092223,1.51392510525377,1.09493207722749,0,0,0,0,0,1.65629520055781,2.19160097101532,1.68707720918437,1.8749975364507,0.871517776369625,0.949082476444386,2.15730093056263,2.35465758150415,0.769494313892781,0,0,0,0,5.07020139287323,3.9313088667105,4.72631925345123,0,0.737930631258681,0,0.768251997860379,1.1240175325762,0.301586917234893,3.61094936118265,0,0,0,0.115930404975077,0,0.144366447761074,0,0.190254152234598,0,0.858486162094873,1.96973604869918,1.63802985597466,2.67536092119711,0.93733833986777,2.18376766658517,0.850650583454319,3.40322386270824,2.3250715081117,14.1851591291128,0,0,0.207328115540772,0.288239906833923,0.12624243342638,0,0,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,7.29742683847143,4.01805673145701,4.21667878966063,0,0,0,0,0,0,0,0.591092280605782,0,0.385029108839245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03384013061444,2.37285620900479,1.17400313583789,0.303127571446259,6.65741758041988,2.11673205330776,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,3.40860999515584,0,0,0,0,1.80479845162965,0,0,0,0.105551628892876,1.13733384070897,0,0,0,1.62567862526312,1.00337954770971,0,0,0.223874754722178,0,0,0.512900250232778,0,0,2.06082023295445,0,0,1.72279661398852,0,0,0,0,0,0,0,0,0.0852266274161009,0,2.64455864577565,1.53752053892085,1.14851441245126,3.6416801107998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6196469961995,0,0,0,0,0,0,0,0,0,3.56021817084395,6.70302275535787,5.44454924306613,1.97701981631236,0.86101074534246,0,0.886860307073351,1.1486170010348,1.01489521846434,0,0.569647187174163,0.476463550915578,1.64544909234478,0,2.70015718619057,0,0.961416640147258,0,1.96032172784825,0.371606350251437,0,0,0,0,0.383010740264733,0,0.649243880549111,0.561594356226918,0.228234679033192,0.156679895773023,5.01268954180134,1.86220955581764,0,0.201799707191048,0.425846237690326,0,0,0.894704431569664,0.500547425135725,0,0,0,0,0,0,0.18714054040822,2.3441308683503,0,4.45773537109913,0,0.23874448473769,0,0,0,0.140669416410513,0,0,0,0.597743964753209,1.38141957765574,0,0.409074730008619,0,0,2.3365771298305,0.179021174675609,0.511572370226872,0.887790650732402,0,0,0.969332746095218,0.0927680981618513,0,0,0,1.44999915086959,6.03105275913148,0,0,0,0,0,0.885741385813839,0.361789315876224,0,0.110579259931225,0,0.219385397153973,0.10893846351899,1.81250867562184,1.53900517007594,0,0,0,0,0.31900115973192,0,0,0,0.627921025580099,1.99454018280188,0,0,0,0,1.74830236878417,0.210998064528027,1.14262965711403,0.424059214301822,0,1.99052386215701,0.884575645033392,0,0,0,0,0.404406797884062,0,0.234264445725339,1.094728735294,3.52196314077761,0.242780379534093,23.6750641709634,0,0,0.31593289814244,0,0,0.664653872707185,1.323967823502,0,0,5.40758137456606,0.416024019039416,0,0.587954384486266,0.0870592065804026,11.531960103974,0,1.54810130062536,1.31560770755134,2.79192553980911,2.61870344518732,2.29465929397901,0.225980740780532,0.411125773940253,0,0.0633107959558787,0.977756913674015,1.68333522528221,0.85381197895741,1.39866726707491,0.288180834308212,0.229073192331831,0,0.720273989940749,3.23056592470125,2.121246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| |||
|short_description=p@chr17:1655912..1656009,+ | |||
}} |
Revision as of 13:02, 20 January 2014
Short description: | p@chr17:1655912..1656009, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:1655912..1656009, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
dendritic cell | 1.86e-16 | 10 |
conventional dendritic cell | 1.28e-13 | 8 |
macrophage dendritic cell progenitor | 3.10e-11 | 61 |
granulocyte monocyte progenitor cell | 3.20e-10 | 67 |
endodermal cell | 8.50e-10 | 58 |
monopoietic cell | 1.16e-09 | 59 |
monocyte | 1.16e-09 | 59 |
monoblast | 1.16e-09 | 59 |
promonocyte | 1.16e-09 | 59 |
immature conventional dendritic cell | 1.20e-09 | 5 |
common dendritic progenitor | 1.20e-09 | 5 |
respiratory epithelial cell | 5.23e-09 | 13 |
endo-epithelial cell | 6.15e-09 | 42 |
Langerhans cell | 2.05e-08 | 5 |
myeloid cell | 2.82e-08 | 108 |
common myeloid progenitor | 2.82e-08 | 108 |
macrophage | 3.42e-08 | 6 |
myeloid leukocyte | 6.26e-08 | 72 |
myeloid lineage restricted progenitor cell | 7.47e-08 | 66 |
epithelial cell | 1.96e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
respiratory tract | 5.15e-11 | 54 |
foregut | 5.28e-11 | 87 |
endoderm-derived structure | 5.74e-10 | 160 |
endoderm | 5.74e-10 | 160 |
presumptive endoderm | 5.74e-10 | 160 |
respiratory primordium | 9.54e-10 | 38 |
endoderm of foregut | 9.54e-10 | 38 |
hematopoietic system | 1.58e-09 | 98 |
blood island | 1.58e-09 | 98 |
hemolymphoid system | 4.58e-09 | 108 |
subdivision of digestive tract | 7.86e-09 | 118 |
respiratory system | 8.78e-09 | 74 |
bone marrow | 1.05e-08 | 76 |
digestive system | 3.42e-08 | 145 |
digestive tract | 3.42e-08 | 145 |
primitive gut | 3.42e-08 | 145 |
bone element | 3.64e-08 | 82 |
immune system | 3.64e-08 | 93 |
skeletal element | 2.49e-07 | 90 |
thoracic cavity element | 2.60e-07 | 34 |
thoracic cavity | 2.60e-07 | 34 |
thoracic segment organ | 5.66e-07 | 35 |